Psyllid ID: psy796

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MAPPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDLRC
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccccccccccHHHHHccHccEEEEEEEccccccEEEEEEEcccccccEEEEEEcccHcHHHHHHHHHHcccccEEEEEEEEEccccEEEEHHHHHHHHHHHHHHHHcccEEccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHccHcccccHHHHHHHHHHHHccccccEEcc
Coil and Loop (DISEMBL)
mappvvqwnispsmgqsykcregdvvpiprYCLRVLERlgschlgemmicetedieldtEKVAVRTCRGDSLREIRFLsslqdpnlvSILGvctgeqppwlvmeYPAQLGDLVQHLNsadnltrdrdrytcqsNVWSFAVTLWEILSLcrdkpfphltneQVIQNAEHMyyggelqvflpkpslcprdiyDLMCDCwkrdqtmrptFKQIYSFMKRstnyksnldlrc
Flexible Loop (DISEMBL)
mappvvqwnispsmgqsykcregdvVPIPRYCLRVLERLGSCHLGEMMICEtedieldtekVAVRTCRGDSLREIRFLsslqdpnlvSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYsfmkrstnyksnldlrc
Low Complexity Region (SEG)
MAPPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDLRC
Disordered region (IsUnstruct)
*******WNI****GQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM**************
Disordered Region (DISOPRED)
***PVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN*********
Disordered Region (DISEMBL)
MAPPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDLRC
Disordered Region (DISPRO)
*APPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDLRC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAPPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDLRC
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q08345	913	Epithelial discoidin doma	yes	N/A	0.285	0.071	0.471	1e-20
Q7YR43	909	Epithelial discoidin doma	yes	N/A	0.285	0.071	0.471	1e-20
Q63474	910	Epithelial discoidin doma	yes	N/A	0.285	0.071	0.471	2e-20
Q03146	911	Epithelial discoidin doma	yes	N/A	0.285	0.071	0.471	2e-20
Q62371	854	Discoidin domain-containi	no	N/A	0.271	0.072	0.416	2e-19
Q16832	855	Discoidin domain-containi	no	N/A	0.271	0.072	0.416	2e-19
P29321	372	Ephrin type-A receptor 8	no	N/A	0.346	0.212	0.367	3e-13
P29319	983	Ephrin type-A receptor 3	no	N/A	0.355	0.082	0.359	7e-13
P54755	1013	Ephrin type-A receptor 5	no	N/A	0.390	0.087	0.350	8e-13
P42690	506	Tyrosine-protein kinase i	N/A	N/A	0.328	0.148	0.373	1e-12

>sp|Q08345|DDR1_HUMAN Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP+
Sbjct: 819 KFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQ 878

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            +Y+LM  CW R+   RP F Q++ F+
Sbjct: 879 GLYELMLRCWSRESEQRPPFSQLHRFL 905

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing (By similarity). Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|Q7YR43|DDR1_PANTR Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP+
Sbjct: 815 KFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQ 874

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            +Y+LM  CW R+   RP F Q++ F+
Sbjct: 875 GLYELMLRCWSRESEQRPPFSQLHRFL 901

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q63474|DDR1_RAT Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP+
Sbjct: 816 KFTTASDVWAFGVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQ 875

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            +Y+LM  CW R+   RP F Q++ F+
Sbjct: 876 TLYELMLRCWSREPEQRPPFSQLHRFL 902

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q03146|DDR1_MOUSE Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP+
Sbjct: 817 KFTTASDVWAFGVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQ 876

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            +Y+LM  CW R+   RP F Q++ F+
Sbjct: 877 TLYELMLRCWSREPEQRPPFAQLHRFL 903

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing, but also tumor cell invasion. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Phosphorylates PTPN11 (By similarity). Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q62371|DDR2_MOUSE Discoidin domain-containing receptor 2 OS=Mus musculus GN=Ddr2 PE=1 SV=2

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 59/84 (70%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q++LP+P+LCP 
Sbjct: 762 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPD 821

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
            +Y LM  CW+R+   RP+F++I+
Sbjct: 822 SVYKLMLSCWRRETKHRPSFQEIH 845

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q16832|DDR2_HUMAN Discoidin domain-containing receptor 2 OS=Homo sapiens GN=DDR2 PE=1 SV=2

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 58/84 (69%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q +LP+P++CP 
Sbjct: 763 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPD 822

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
            +Y LM  CW+RD   RP+F++I+
Sbjct: 823 SVYKLMLSCWRRDTKNRPSFQEIH 846

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P29321|EPHA8_RAT Ephrin type-A receptor 8 (Fragment) OS=Rattus norvegicus GN=Epha8 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 8/87 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+VWSF V +WE+L+   ++P+ ++TN+ VI + E  Y        LP P  CPR 
Sbjct: 182 FSSASDVWSFGVVMWEVLAYG-ERPYWNMTNQDVISSVEEGYR-------LPAPMGCPRA 233

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++ LM DCW +D+  RP F  + S ++
Sbjct: 234 LHQLMLDCWHKDRAQRPRFSHVVSVLE 260

Receptor tyrosine kinase which binds promiscuously GPI-anchored ephrin-A family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. The GPI-anchored ephrin-A EFNA2, EFNA3, and EFNA5 are able to activate EPHA8 through phosphorylation. With EFNA5 may regulate integrin-mediated cell adhesion and migration on fibronectin substrate but also neurite outgrowth. During development of the nervous system plays also a role in axon guidance. Downstream effectors of the EPHA8 signaling pathway include FYN which promotes cell adhesion upon activation by EPHA8 and the MAP kinases in the stimulation of neurite outgrowth.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P29319|EPHA3_MOUSE Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1

 Score = 74.3 bits (181), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 800 KFTSASDVWSYGIVLWEVMSYG-ERPYSQMSNQDVIKAVDERYR-------LPPPMDCPA 851

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 852 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 880

Receptor tyrosine kinase which binds promiscuously membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous for ephrin-A ligands it binds preferentially EFNA5. Upon activation by EFNA5 regulates cell-cell adhesion, cytoskeletal organization and cell migration. Plays a role in cardiac cells migration and differentiation and regulates the formation of the atrioventricular canal and septum during development probably through activation by EFNA1. Involved in the retinotectal mapping of neurons. May also control the segregation but not the guidance of motor and sensory axons during neuromuscular circuit development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P54755|EPHA5_CHICK Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 8/97 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  +TN+ VI+  E  Y        LP P  CP 
Sbjct: 830 KFTSASDVWSYGIVMWEVMSY-GERPYWEMTNQDVIKAVEEGYR-------LPSPMDCPA 881

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNL 224
            +Y LM DCW++D+  RP F +I S + +     S+L
Sbjct: 882 ALYQLMLDCWQKDRNSRPKFDEIVSMLDKLIRNPSSL 918

Receptor tyrosine kinase which binds promiscuously GPI-anchored ephrin-A family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Among GPI-anchored ephrin-A ligands, EFNA5 most probably constitutes the cognate/functional ligand for EPHA5. Functions as an axon guidance molecule during development and may be involved in the development of the retinotectal, entorhino-hippocampal and hippocamposeptal pathways. Together with EFNA5 plays also a role in synaptic plasticity in adult brain through regulation of synaptogenesis.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P42690|SRK4_SPOLA Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 8/83 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L+E+++  R  P+P +TN QV++  +  Y        +P+P  CP 
Sbjct: 411 RFTIKSDVWSFGIVLYEVITYGR-FPYPGMTNAQVLEQIQQSYR-------MPRPMGCPE 462

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M DCW+ D   RPTF+ +
Sbjct: 463 KLYAIMMDCWREDPASRPTFETL 485

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
242022576	773	conserved hypothetical protein [Pediculu	0.754	0.222	0.450	1e-45
328721006	949	PREDICTED: discoidin domain-containing r	0.434	0.104	0.73	2e-39
380018092	922	PREDICTED: discoidin domain-containing r	0.324	0.080	0.719	7e-37
328785845	890	PREDICTED: discoidin domain-containing r	0.324	0.083	0.719	8e-37
350406209	917	PREDICTED: discoidin domain-containing r	0.346	0.086	0.719	9e-37
340716320	922	PREDICTED: discoidin domain-containing r	0.324	0.080	0.719	9e-37
383853778	884	PREDICTED: discoidin domain-containing r	0.324	0.083	0.719	1e-36
350406211	890	PREDICTED: discoidin domain-containing r	0.324	0.083	0.719	1e-36
340716322	890	PREDICTED: discoidin domain-containing r	0.324	0.083	0.719	1e-36
383853776	890	PREDICTED: discoidin domain-containing r	0.324	0.083	0.719	1e-36

>gi|242022576|ref|XP_002431716.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517024|gb|EEB18978.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 41/213 (19%)

Query: 3   PPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKV 62
           PPVV WNI+PSMGQ+YKC+E ++VPIPRYCL++ E++G+  LG     +  DI +     
Sbjct: 591 PPVVSWNIAPSMGQTYKCKEAELVPIPRYCLKITEKVGT--LGTNYSIKVADIAM----- 643

Query: 63  AVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
               C           S +   +   I     G +PP  +   P +   L          
Sbjct: 644 ----C-----------SPMYKKDYSEI-----GGRPPAPIRWLPWESILL---------- 673

Query: 123 TRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP 182
               DRYTC S VWS AVT+WE++SL R++PF H+TNE+VIQNAEHMYYG EL+V LPKP
Sbjct: 674 ----DRYTCSSGVWSLAVTIWEVVSLARERPFQHMTNEEVIQNAEHMYYGEELKVLLPKP 729

Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +LC  ++Y+++C CWKRD++ RPT K+IY+F+K
Sbjct: 730 TLCDNELYNMLCHCWKRDESERPTVKKIYNFLK 762

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328721006|ref|XP_003247185.1| PREDICTED: discoidin domain-containing receptor 2-like [Acyrthosiphon pisum]

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 85/100 (85%), Gaps = 1/100 (1%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S VWSFAVT+WE+L++ RDKPFPHLTNEQVI NAE MYYGGELQV LPKP+LCP
Sbjct: 841 DRYTCPSTVWSFAVTMWELLNMARDKPFPHLTNEQVIHNAEQMYYGGELQVLLPKPNLCP 900

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYKSNLD 225
            +IY+LMC CWKRDQ +RPTFKQ+Y F+KR+ T Y   +D
Sbjct: 901 TEIYELMCQCWKRDQNLRPTFKQLYHFLKRNHTTYSCEID 940

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018092|ref|XP_003692970.1| PREDICTED: discoidin domain-containing receptor 2-like [Apis florea]

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 824 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 883

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 884 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 912

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785845|ref|XP_392450.4| PREDICTED: discoidin domain-containing receptor 2-like [Apis mellifera]

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 792 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 851

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 852 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 880

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406209|ref|XP_003487692.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 1 [Bombus impatiens]

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 819 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 878

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 879 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 907

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716320|ref|XP_003396647.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 1 [Bombus terrestris]

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 824 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 883

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 884 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 912

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853778|ref|XP_003702399.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 2 [Megachile rotundata]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 786 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 845

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 846 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 874

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406211|ref|XP_003487693.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 2 [Bombus impatiens]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 792 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 851

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 852 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 880

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716322|ref|XP_003396648.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 2 [Bombus terrestris]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 792 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 851

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 852 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 880

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853776|ref|XP_003702398.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 1 [Megachile rotundata]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 80/89 (89%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           DRYTC S+VWSFAVTLWE++SL R+KPF HLTN+QVIQNAEHMYYG ELQ++LPKP++CP
Sbjct: 792 DRYTCSSSVWSFAVTLWEVMSLAREKPFQHLTNDQVIQNAEHMYYGAELQIYLPKPTMCP 851

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++Y +MC CW+RD+T RPTFK IY+F+K
Sbjct: 852 EEVYRMMCSCWRRDETSRPTFKDIYTFLK 880

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
UNIPROTKB|F1PGJ7	921	DDR1 "Uncharacterized protein"	0.381	0.094	0.471	9.8e-34
UNIPROTKB|J9P5N9	947	DDR1 "Uncharacterized protein"	0.381	0.091	0.471	1.1e-33
FB|FBgn0053531	1064	Ddr "Discoidin domain receptor	0.390	0.083	0.471	7.9e-33
UNIPROTKB|F1NG66	862	DDR2 "Uncharacterized protein"	0.368	0.097	0.452	1.6e-32
MGI|MGI:1345277	854	Ddr2 "discoidin domain recepto	0.368	0.098	0.416	2.3e-31
UNIPROTKB|F1MIE0	855	DDR2 "Uncharacterized protein"	0.368	0.098	0.416	4.8e-31
UNIPROTKB|F1S212	872	DDR2 "Uncharacterized protein"	0.416	0.108	0.391	5.1e-31
UNIPROTKB|Q16832	855	DDR2 "Discoidin domain-contain	0.368	0.098	0.416	9.8e-31
UNIPROTKB|E2RNZ4	866	DDR2 "Uncharacterized protein"	0.368	0.096	0.416	1e-30
UNIPROTKB|Q5F3X2	873	GTF2H4 "Uncharacterized protei	0.381	0.099	0.425	1.4e-30

UNIPROTKB|F1PGJ7 DDR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 241 (89.9 bits), Expect = 9.8e-34, Sum P(3) = 9.8e-34
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP 
Sbjct:   827 KFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPSCPL 886

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
              +Y+LM  CW R+   RP+F Q++ F+
Sbjct:   887 GLYELMLRCWSREPEQRPSFSQLHRFL 913

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|J9P5N9 DDR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 241 (89.9 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE+L LCR +PF  LT+EQVI+NA   +     QV+L +P  CP 
Sbjct:   853 KFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPSCPL 912

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
              +Y+LM  CW R+   RP+F Q++ F+
Sbjct:   913 GLYELMLRCWSREPEQRPSFSQLHRFL 939

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

FB|FBgn0053531 Ddr "Discoidin domain receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 267 (99.0 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
 Identities = 42/89 (47%), Positives = 69/89 (77%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T +S+VWSFAV LWEIL+  R++P+ HL+++ VI+N   +Y   ++   LP P  CPR
Sbjct:   962 KFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPR 1021

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             +IYDLMC+CW+RD++ RP+F++I+ +++R
Sbjct:  1022 EIYDLMCECWQRDESSRPSFREIHLYLQR 1050

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|F1NG66 DDR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 237 (88.5 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
 Identities = 38/84 (45%), Positives = 58/84 (69%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE  +LCR++P+  L++EQVI+N    +     Q +LPKP+LCP 
Sbjct:   769 KFTTASDVWAFGVTLWETFTLCREQPYSQLSDEQVIENTGEFFRDQGRQTYLPKPALCPD 828

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW+RD   RP+F+ ++
Sbjct:   829 SVYKLMLSCWRRDTKDRPSFQDLH 852

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

MGI|MGI:1345277 Ddr2 "discoidin domain receptor family, member 2" [Mus musculus (taxid:10090)]

 Score = 229 (85.7 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
 Identities = 35/84 (41%), Positives = 59/84 (70%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q++LP+P+LCP 
Sbjct:   762 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPD 821

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW+R+   RP+F++I+
Sbjct:   822 SVYKLMLSCWRRETKHRPSFQEIH 845

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISO

GO:0005518 "collagen binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0030199 "collagen fibril organization" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=ISO

GO:0031214 "biomineral tissue development" evidence=IMP

GO:0035988 "chondrocyte proliferation" evidence=IMP

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=ISO;IDA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=ISO;IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IMP

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IMP

UNIPROTKB|F1MIE0 DDR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 228 (85.3 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
 Identities = 35/84 (41%), Positives = 58/84 (69%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q +LP+P++CP 
Sbjct:   763 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPD 822

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW+RD   RP+F++I+
Sbjct:   823 SVYKLMLSCWRRDTKHRPSFQEIH 846

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|F1S212 DDR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 231 (86.4 bits), Expect = 5.1e-31, Sum P(3) = 5.1e-31
 Identities = 38/97 (39%), Positives = 64/97 (65%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE+ + C+++P+  L++EQVI+N    +     Q +LP+P++CP 
Sbjct:   778 KFTTASDVWAFGVTLWEMFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPD 837

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNL 224
              +Y LM  CW+RD   RP+F++I+  + +    K NL
Sbjct:   838 SVYKLMLSCWRRDTKHRPSFQEIHLLLLQQG--KKNL 872

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|Q16832 DDR2 "Discoidin domain-containing receptor 2" [Homo sapiens (taxid:9606)]

 Score = 228 (85.3 bits), Expect = 9.8e-31, Sum P(3) = 9.8e-31
 Identities = 35/84 (41%), Positives = 58/84 (69%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q +LP+P++CP 
Sbjct:   763 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPD 822

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW+RD   RP+F++I+
Sbjct:   823 SVYKLMLSCWRRDTKNRPSFQEIH 846

GO:0007155 "cell adhesion" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=IDA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IDA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=ISS

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0045860 "positive regulation of protein kinase activity" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=IMP

GO:0005518 "collagen binding" evidence=IDA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IDA

GO:0003416 "endochondral bone growth" evidence=ISS

GO:0035988 "chondrocyte proliferation" evidence=ISS;TAS

GO:0010715 "regulation of extracellular matrix disassembly" evidence=TAS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS;TAS

GO:0048146 "positive regulation of fibroblast proliferation" evidence=ISS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0030199 "collagen fibril organization" evidence=ISS

GO:0031214 "biomineral tissue development" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E2RNZ4 DDR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 228 (85.3 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
 Identities = 35/84 (41%), Positives = 58/84 (69%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE  + C+++P+  L++EQVI+N    +     Q++LP+P +CP 
Sbjct:   774 KFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPVICPD 833

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW+RD   RP+F++I+
Sbjct:   834 SVYKLMLSCWRRDTKHRPSFQEIH 857

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|Q5F3X2 GTF2H4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 222 (83.2 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
 Identities = 37/87 (42%), Positives = 57/87 (65%)

Query:   128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             ++T  S+VW+F VTLWE+  LC+++P+  L++EQVI+N    +     Q++L +  LCP 
Sbjct:   779 KFTTASDVWAFGVTLWEMFILCKEQPYSLLSDEQVIENTGEFFRSQGRQIYLSQTPLCPN 838

Query:   188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
              ++DLM  CW RD   RPTF  I+ F+
Sbjct:   839 PVFDLMLKCWSRDIKDRPTFDMIHHFL 865

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	228
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-45
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-29
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	4e-28
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-26
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-26
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-26
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-25
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-23
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-21
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-20
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-19
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-18
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-18
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-18
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-18
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-18
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-18
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	9e-18
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-17
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-17
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-16
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-16
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-16
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-15
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-15
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-15
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-15
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	4e-15
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	5e-15
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-15
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	9e-15
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-14
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-14
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-14
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-14
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-14
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-14
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-14
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-13
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-13
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-13
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-13
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-13
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	5e-13
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-13
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-13
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	9e-13
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-12
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-12
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-12
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-12
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-12
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-12
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-12
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	7e-12
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	7e-12
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-11
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-11
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-11
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-11
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-10
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-10
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-10
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-10
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	2e-10
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-10
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-10
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-10
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-10
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	7e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-10
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-09
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-09
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-09
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-09
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	2e-09
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-09
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-09
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-09
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	4e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-09
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	4e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-08
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-08
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-08
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-08
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-08
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-08
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-07
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	9e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	9e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	5e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-05
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-05
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	2e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	9e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.001
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	0.001
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.001
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.003
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.003
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.003
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.003
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.004
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.004
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	0.004
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.004

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  153 bits (388), Expect = 1e-45
 Identities = 47/91 (51%), Positives = 73/91 (80%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
             ++T +S+VW+F VTLWEIL+LCR++P+ HLT++QVI+NA H +     Q++LP+P  C
Sbjct: 206 LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNC 265

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           P+DIY+LM +CW+RD+  RPTF++I+ F++R
Sbjct: 266 PKDIYELMLECWRRDEEDRPTFREIHLFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score =  111 bits (278), Expect = 2e-29
 Identities = 40/85 (47%), Positives = 63/85 (74%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWEIL+LC+++P+  L++EQVI+N    +     QV+LPKP+LCP 
Sbjct: 208 KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPD 267

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y LM  CW+R+   RP+F++I++
Sbjct: 268 SLYKLMLSCWRRNAKERPSFQEIHA 292

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score =  107 bits (269), Expect = 4e-28
 Identities = 41/87 (47%), Positives = 61/87 (70%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWEIL LC+++P+  LT+EQVI+NA   +     QV+L +P  CP+
Sbjct: 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQ 275

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            +Y+LM  CW RD   RP+F  I++F+
Sbjct: 276 GLYELMLQCWSRDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  102 bits (257), Expect = 1e-26
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 8/87 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +L  ++P+P ++NE+V++  E  Y        LP+P  CP 
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLG-EQPYPGMSNEEVLELLEDGYR-------LPRPENCPD 231

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++Y+LM  CW  D   RPTF ++   +
Sbjct: 232 ELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  101 bits (254), Expect = 3e-26
 Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 8/87 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +L  ++P+P ++NE+V++  ++ Y        LP+P  CP 
Sbjct: 179 KFTSKSDVWSFGVLLWEIFTLG-EQPYPGMSNEEVLEYLKNGY-------RLPQPPNCPP 230

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++YDLM  CW  D   RPTF ++   +
Sbjct: 231 ELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  100 bits (252), Expect = 7e-26
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 8/87 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +L  ++P+P ++N +V++  +  Y        LPKP  CP 
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLG-EEPYPGMSNAEVLEYLKKGY-------RLPKPPNCPP 231

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++Y LM  CW  D   RPTF ++   +
Sbjct: 232 ELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 99.7 bits (248), Expect = 4e-25
 Identities = 36/87 (41%), Positives = 58/87 (66%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VW+F VTLWE+ +LC+++P+  L++EQVI+N    +     Q++L +  LCP 
Sbjct: 207 KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPS 266

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            ++ LM  CW RD   RPTF +I+ F+
Sbjct: 267 PVFKLMMRCWSRDIKDRPTFNKIHHFL 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 94.5 bits (236), Expect = 1e-23
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +S+VWSF V LWEI +L    P+P L+NE+V++     Y        LPKP  CP 
Sbjct: 183 IFTSKSDVWSFGVLLWEIFTLG-ATPYPGLSNEEVLEYLRKGY-------RLPKPEYCPD 234

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y+LM  CW+ D   RPTF ++   ++
Sbjct: 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 88.9 bits (221), Expect = 3e-21
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 22/111 (19%)

Query: 27  PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEK-------------VAVRTCRGDS-- 71
             PR  L  +E+LG    GE+ +CE + ++  +EK             VAV+  R D+  
Sbjct: 1   EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60

Query: 72  ------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
                 L+E++ LS L DPN+  +LGVCT + P  ++MEY  + GDL Q L
Sbjct: 61  NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEY-MENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 85.1 bits (211), Expect = 6e-20
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 8/85 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWSF + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 184 KFTSASDVWSFGIVMWEVMSY-GERPYWDMSNQDVIKAVEDGYR-------LPPPMDCPS 235

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y LM DCW++D+  RPTF QI S
Sbjct: 236 ALYQLMLDCWQKDRNERPTFSQIVS 260

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 82.6 bits (204), Expect = 6e-19
 Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 8/83 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T QS+VWSF V +WEIL+L + +P+P L N++V+Q   H+  GG LQ    KP  CP  
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQ-QPYPALNNQEVLQ---HVTAGGRLQ----KPENCPDK 241

Query: 189 IYDLMCDCWKRDQTMRPTFKQIY 211
           IY LM +CW +D + RPTF +I 
Sbjct: 242 IYQLMTNCWAQDPSERPTFDRIQ 264

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 81.2 bits (201), Expect = 1e-18
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VTLWE  S    KP+  +   +VI   E           LP+P  CP+
Sbjct: 174 KFSSKSDVWSYGVTLWEAFSY-GAKPYGEMKGAEVIAMLESGER-------LPRPEECPQ 225

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +IY +M  CWK     RPTF ++ S  +R
Sbjct: 226 EIYSIMLSCWKYRPEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 81.2 bits (201), Expect = 2e-18
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF V LWE+ +L  ++P+  L+NE+V+   + +  GG     L  P  CP  
Sbjct: 198 FTTKSDVWSFGVVLWEMATLA-EQPYQGLSNEEVL---KFVIDGG----HLDLPENCPDK 249

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           + +LM  CW+ +  MRPTF +I S +K 
Sbjct: 250 LLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 8/87 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L EI++  R  P+P +TN +V++  E  Y        +P+P  CP 
Sbjct: 180 RFTIKSDVWSFGILLTEIVTYGR-VPYPGMTNREVLEQVERGYR-------MPRPPNCPE 231

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++YDLM  CW +D   RPTF+ + SF+
Sbjct: 232 ELYDLMLQCWDKDPEERPTFEYLQSFL 258

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 8/85 (9%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           +R++ +S+VWSF + L EI++  R  P+P +TN +V+Q  +  Y        +P P  CP
Sbjct: 179 NRFSIKSDVWSFGILLTEIVTYGR-MPYPGMTNAEVLQQVDQGYR-------MPCPPGCP 230

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
           +++YD+M DCWK D   RPTF+ + 
Sbjct: 231 KELYDIMLDCWKEDPDDRPTFETLQ 255

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 80.2 bits (198), Expect = 4e-18
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+NE+VI   E +  G  LQ    +P  CP 
Sbjct: 200 KFTTESDVWSFGVVLWEIFTYGK-QPWYGLSNEEVI---ECITQGRLLQ----RPRTCPS 251

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++YD+M  CWKRD   R   K I+  ++
Sbjct: 252 EVYDIMLGCWKRDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 79.4 bits (196), Expect = 6e-18
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           D  R++ +S+VWSF V +WE+ S     P+   +N +V+   E +  G      L +P L
Sbjct: 174 DYSRFSSKSDVWSFGVLMWEVFS-EGKMPYERFSNSEVV---ESVSAG----YRLYRPKL 225

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
            P ++Y +M  CW      RP FK++ S
Sbjct: 226 APTEVYTIMYSCWHEKPEDRPAFKKLLS 253

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 79.0 bits (195), Expect = 9e-18
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+VW F VTLWE+ +    +P+  L+  Q+++  +     GE    L +P  CP+
Sbjct: 176 TFSHASDVWMFGVTLWEMFTYGE-EPWAGLSGSQILKKIDK---EGER---LERPEACPQ 228

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           DIY++M  CW  +   RPTF  +  F+
Sbjct: 229 DIYNVMLQCWAHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT QS+VWSF V LWEI +L    P+P +  E++ +  +  Y        + KP  C
Sbjct: 208 DRVYTHQSDVWSFGVLLWEIFTLG-GSPYPGIPVEELFKLLKEGYR-------MEKPQNC 259

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +++Y LM DCW    + RPTFKQ+   + R
Sbjct: 260 TQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 77.1 bits (190), Expect = 4e-17
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RYT +S+VWS+ + LWE  SL  D P+P ++N+Q  +  E  Y        +P P LCP 
Sbjct: 171 RYTSESDVWSYGILLWETFSL-GDTPYPGMSNQQTRERIESGYR-------MPAPQLCPE 222

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
           +IY LM  CW  D   RP+F +IY
Sbjct: 223 EIYRLMLQCWAYDPENRPSFSEIY 246

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL L   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 184 RFTSASDVWMFGVCMWEILMLGV-KPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 235

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y LM  CW  D + RP F ++ +
Sbjct: 236 TLYSLMTKCWAYDPSKRPRFTELKA 260

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 75.3 bits (185), Expect = 3e-16
 Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 185 KFTSASDVWSYGIVMWEVMSY-GERPYWEMSNQDVIKAIEEGYR-------LPAPMDCPA 236

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++D+  RP F+QI S + +
Sbjct: 237 ALHQLMLDCWQKDRNERPKFEQIVSILDK 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 74.9 bits (184), Expect = 4e-16
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI   E  Y        LP P  CP 
Sbjct: 187 KFTSASDVWSYGIVMWEVMSY-GERPYWDMSNQDVINAIEQDYR-------LPPPMDCPT 238

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++D+  RP F QI S + +
Sbjct: 239 ALHQLMLDCWQKDRNARPKFGQIVSTLDK 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 74.5 bits (183), Expect = 4e-16
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 8/87 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        +P+P  CP +
Sbjct: 180 FTIKSDVWSFGILLTEIVTYGR-IPYPGMTNPEVIQNLERGYR-------MPRPDNCPEE 231

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y+LM  CWK     RPTF+ + S ++
Sbjct: 232 LYELMRLCWKEKPEERPTFEYLRSVLE 258

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 11/101 (10%)

Query: 33  LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRGDS--------LREIRFLSSLQD 83
           L + ++LG    GE+   + +        +VAV+T + D+        LRE R +  L  
Sbjct: 1   LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
           PN+V +LGVCT E+P ++VMEY  + GDL+ +L  +   L+
Sbjct: 61  PNVVKLLGVCTEEEPLYIVMEY-MEGGDLLSYLRKNRPKLS 100

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 8/90 (8%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           +RYT +S+VW++ V LWEI S    +P+  + +E+VI      YY  +  V L  P  CP
Sbjct: 207 NRYTTESDVWAYGVVLWEIFSYGM-QPYYGMAHEEVI------YYVRDGNV-LSCPDNCP 258

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++Y+LM  CW +  + RP+F  I   ++R
Sbjct: 259 LELYNLMRLCWSKLPSDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 33  LRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQD 83
           L + ++LG    GE+         +    +VAV+T + D+        LRE R +  L  
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           PN+V +LGVCT E+P  +VMEY    GDL+ +L
Sbjct: 61  PNIVKLLGVCTEEEPLMIVMEY-MPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 72.0 bits (176), Expect = 3e-15
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 8/84 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF + LWE  SL    P+ +L+N+Q  +  E         V LP P LCP 
Sbjct: 172 RYSSESDVWSFGILLWEAFSL-GAVPYANLSNQQTREAIEQ-------GVRLPCPELCPD 223

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
            +Y LM  CW+ D   RP+F  ++
Sbjct: 224 AVYRLMERCWEYDPGQRPSFSTVH 247

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.8 bits (177), Expect = 4e-15
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 9/88 (10%)

Query: 37  ERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQDPNLVS 88
           ++LG    GE+   + +  +  T +VAV+T + D+        L+E R +  L  PN+V 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 89  ILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           +LGVCT E+P +LV+EY  + GDL+ +L
Sbjct: 61  LLGVCTEEEPLYLVLEY-MEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 71.9 bits (176), Expect = 4e-15
 Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 8/90 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+VWSF + +WE++S   ++P+  ++ + VI+  E  +        LP P  CP 
Sbjct: 184 HFSSASDVWSFGIVMWEVMSY-GERPYWDMSGQDVIKAVEDGFR-------LPAPRNCPN 235

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
            ++ LM DCW++++  RP F QI+S + + 
Sbjct: 236 LLHQLMLDCWQKERGERPRFSQIHSILSKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 71.7 bits (176), Expect = 5e-15
 Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 7/88 (7%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           D ++ +S+VWSF V +WE+ +   + PF  L++E+V+   +     G+L+  LP P  CP
Sbjct: 193 DDFSTKSDVWSFGVLMWEVFTQ-GELPFYGLSDEEVLNRLQ----AGKLE--LPVPEGCP 245

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
             +Y LM  CW  +   RP+F ++ S +
Sbjct: 246 SRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 71.9 bits (176), Expect = 5e-15
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 198 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 249

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 250 VTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 71.2 bits (174), Expect = 6e-15
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 8/87 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P ++N +VI+  E  Y        +P+P  CP +
Sbjct: 180 FTIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEE 231

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y++M  CWK     RPTF+ I S + 
Sbjct: 232 LYNIMMRCWKNRPEERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 70.9 bits (173), Expect = 9e-15
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 179 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 230

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 231 SLHDLMCQCWRKEPEERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 8/83 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+ + E  Y        +  P  CP 
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPHVEKGYR-------MEAPEGCPP 226

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++Y +M DCW+ D   RPTFKQ+
Sbjct: 227 EVYKVMKDCWELDPAKRPTFKQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 70.2 bits (173), Expect = 2e-14
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 10/93 (10%)

Query: 33  LRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQD 83
           L + ++LG    GE+       D E    KVAV+T +  +        L E   +  L  
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           PN+V +LGVCT  +P ++V EY    GDL+  L
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEY-MPGGDLLDFL 92

Length = 258

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 70.0 bits (171), Expect = 2e-14
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+++  R  P+P + N +V++  E  Y        +P P  CP 
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPI 230

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +++LM  CWK+D   RPTF+ + SF++
Sbjct: 231 SLHELMLQCWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 8/83 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT +S+VWS+ VT+WE+++    KP+  +   ++      +  G  L    P+P +C  
Sbjct: 187 IYTHKSDVWSYGVTVWELMTFGA-KPYEGIPAVEIPD---LLEKGERL----PQPPICTI 238

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           D+Y ++  CW  D   RPTFK++
Sbjct: 239 DVYMVLVKCWMIDAESRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 69.8 bits (171), Expect = 3e-14
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 8/82 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++VWSF V LWEI SL    P+P  TN++V+   E +  GG L      P  CP  
Sbjct: 198 FTSKTDVWSFGVLLWEIFSLGY-MPYPGRTNQEVM---EFVTGGGRLD----PPKGCPGP 249

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M DCW+     RP F  I
Sbjct: 250 VYRIMTDCWQHTPEDRPNFATI 271

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 69.6 bits (170), Expect = 3e-14
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 14/89 (15%)

Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
           ADN+      YT  S+VW+F VT+WEI++  +  P+  + N ++     ++  G  L+  
Sbjct: 188 ADNV------YTTHSDVWAFGVTMWEIMTRGQ-TPYAGVENSEIY---NYLIKGNRLK-- 235

Query: 179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTF 207
             +P  C  D+Y+LMC CW  +   RP+F
Sbjct: 236 --QPPDCLEDVYELMCQCWSPEPKCRPSF 262

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 68.9 bits (168), Expect = 5e-14
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 8/87 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  ++NEQV++    +  GG     L KP  CP  
Sbjct: 198 FTTYSDVWSFGVVLWEIATLA-EQPYQGMSNEQVLR---FVMEGG----LLDKPDNCPDM 249

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 250 LFELMRMCWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 68.9 bits (168), Expect = 5e-14
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+++  R  P+P + N +V++  E  Y        +P P  CP 
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGR-VPYPGMVNREVLEQVERGYR-------MPCPQGCPE 230

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +++LM  CWK+D   RPTF+ I SF++
Sbjct: 231 SLHELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 67.7 bits (165), Expect = 1e-13
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWSF + +WE++S   ++P+  ++N +V++     +        LP P  CP 
Sbjct: 186 KFTSASDVWSFGIVMWEVMSF-GERPYWDMSNHEVMKAINDGFR-------LPAPMDCPS 237

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM  CW++D+  RP F  I + + +
Sbjct: 238 AVYQLMLQCWQQDRARRPRFVDIVNLLDK 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 67.3 bits (164), Expect = 1e-13
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 226

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +YD+M  CW  D   RP+F Q+
Sbjct: 227 VVYDVMKQCWHLDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 67.3 bits (164), Expect = 2e-13
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ V LWE+ S  R  P+P ++ ++V +  E  Y        +  P  CP 
Sbjct: 173 KFSSKSDVWSYGVLLWEVFSYGR-APYPKMSLKEVKECVEKGYR-------MEPPEGCPA 224

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y LM  CW+ +   RP+F ++   +++
Sbjct: 225 DVYVLMTSCWETEPKKRPSFHKLREKLEK 253

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 66.2 bits (161), Expect = 5e-13
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L+EI++  +  P+P ++N  V+   +  Y        +P+   CP +
Sbjct: 181 FTIKSDVWSFGILLYEIVTYGK-IPYPGMSNSDVMSALQRGYR-------MPRMENCPDE 232

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +YD+M  CWK     RPTF  + S +
Sbjct: 233 LYDIMKTCWKEKAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 66.2 bits (161), Expect = 5e-13
 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWS  V LWEI +  + +P+  L+N +VI   E +  G  LQ    +P  CP+
Sbjct: 198 KFTTESDVWSLGVVLWEIFTYGK-QPWYQLSNNEVI---ECITQGRVLQ----RPRTCPK 249

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++YDLM  CW+R+  MR   K+I+S ++
Sbjct: 250 EVYDLMLGCWQREPHMRLNIKEIHSLLQ 277

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 66.0 bits (161), Expect = 5e-13
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 14/92 (15%)

Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
           AD +      YT +S+VW+F VT+WEI +  +  P+P + N ++     ++ +G  L+  
Sbjct: 188 ADRV------YTSKSDVWAFGVTMWEIATRGQ-TPYPGVENHEIYD---YLRHGNRLK-- 235

Query: 179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             +P  C  ++YDLM  CW+ D   RPTF ++
Sbjct: 236 --QPEDCLDELYDLMYSCWRADPKDRPTFTKL 265

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 66.4 bits (162), Expect = 6e-13
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 15/90 (16%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNE---QVIQNAEHMYYGGELQVFLPKPSL 184
           YT +S+VWS+ + LWEI SL  + P+P +  +    ++I+    M           +P  
Sbjct: 220 YTFESDVWSYGILLWEIFSLGSN-PYPGMPVDSKFYKLIKEGYRM----------AQPEH 268

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
            P +IYD+M  CW  D   RPTFKQI   +
Sbjct: 269 APAEIYDIMKTCWDADPLKRPTFKQIVQLI 298

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 65.4 bits (159), Expect = 8e-13
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 12/85 (14%)

Query: 128 RYTCQSNVWSFAVTLWEILSL--CRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           RY+ +S+VWS+ + LWE  SL  C   P+P +TN+Q  +  E  Y        +  P  C
Sbjct: 170 RYSSESDVWSYGILLWETFSLGVC---PYPGMTNQQAREQVEKGYR-------MSCPQKC 219

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI 210
           P D+Y +M  CW      RP F ++
Sbjct: 220 PDDVYKVMQRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 65.4 bits (159), Expect = 9e-13
 Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 8/87 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N +VI   E +  G  L+    +P +CP+
Sbjct: 201 KFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVI---ECITQGRVLE----RPRVCPK 252

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++YD+M  CW+R+   R   K+IY  +
Sbjct: 253 EVYDIMLGCWQREPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRD------KPFPHLTNEQVIQNAEHMYYGGELQVFLP 180
            +++  S+VWSF VTL+E+ +          +    +   Q       +    +    LP
Sbjct: 187 SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP 246

Query: 181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
           +P  CP ++YDLM  CW+ +   RP+F  +
Sbjct: 247 RPPSCPDEVYDLMKLCWEAEPQDRPSFADL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 65.4 bits (159), Expect = 1e-12
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RYT QS+VWS+ VT+WE++S   + P+  +   +V    E     GE    L +P +C  
Sbjct: 187 RYTHQSDVWSYGVTVWEMMSYGAE-PYAGMRPHEVPDLLEK----GER---LAQPQICTI 238

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D+ +RPTFK++ +   R
Sbjct: 239 DVYMVMVKCWMIDENVRPTFKELANEFTR 267

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 65.0 bits (158), Expect = 1e-12
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S++WSF V LWEI +  + +P+  L+N + I   E +  G EL+    +P  CP 
Sbjct: 200 KFTTESDIWSFGVVLWEIFTYGK-QPWYQLSNTEAI---ECITQGRELE----RPRTCPP 251

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M  CW+R+   R   K I+S ++ 
Sbjct: 252 EVYAIMQGCWQREPQQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 10/84 (11%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDK-PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
              ++ +S+VWSF + L+E+ +    + P+P + N +V       Y        +P P+ 
Sbjct: 178 HGTFSTKSDVWSFGILLYEMFT--YGQVPYPGMNNHEVYDQITAGYR-------MPCPAK 228

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFK 208
           CP++IY +M +CW  +   RP+FK
Sbjct: 229 CPQEIYKIMLECWAAEPEDRPSFK 252

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 65.0 bits (158), Expect = 2e-12
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 9/98 (9%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C
Sbjct: 216 DRIYTHQSDVWSFGVLLWEIFTL-GGSPYPGVPVEELFKLLKEGHR-------MDKPSNC 267

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
             ++Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 268 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 64.4 bits (157), Expect = 2e-12
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S++WSF V LWEI S    +P+   +N++VI+           Q+ LP P  CP 
Sbjct: 202 KFTTESDIWSFGVVLWEIFSYGL-QPYYGFSNQEVIEMIR------SRQL-LPCPEDCPA 253

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +Y LM +CW      RP FK I++ ++
Sbjct: 254 RVYALMIECWNEIPARRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL +  P+P  L N +  +  +  Y        + +P   P 
Sbjct: 291 YTVQSDVWSYGILLWEIFSLGKS-PYPGILVNSKFYKMVKRGYQ-------MSRPDFAPP 342

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +IY +M  CW  + T RPTF QI   ++R
Sbjct: 343 EIYSIMKMCWNLEPTERPTFSQISQLIQR 371

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 63.8 bits (155), Expect = 4e-12
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT QS+VWSF + +WEI +L    P+P +  E++ +     +        + KPS C
Sbjct: 210 DRVYTHQSDVWSFGILMWEIFTL-GGSPYPGIPVEELFKLLREGHR-------MDKPSNC 261

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN--LDLR 227
             ++Y LM +CW    T RPTFKQ+   + +     S   LDL 
Sbjct: 262 THELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYLDLS 305

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 63.0 bits (153), Expect = 7e-12
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETE--------DIELDTEK-----VAVRTCRGDS--- 71
            PR  L   E+LG    GE+ +CE              +  K     VAV+  R D+   
Sbjct: 2   FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN 61

Query: 72  -----LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
                L+E++ LS L+DPN++ +LGVC  E P  ++ EY  + GDL Q L+S
Sbjct: 62  ARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEY-MENGDLNQFLSS 112

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 62.7 bits (152), Expect = 7e-12
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 12/82 (14%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQ--NAEHMYYGGELQVFLPKPSLC 185
           +Y+ +S+VWSF V +WE+ S  +  P+ + +N +V++  NA    Y         KP L 
Sbjct: 177 KYSSKSDVWSFGVLMWEVFSEGK-TPYENRSNSEVVETINAGFRLY---------KPRLA 226

Query: 186 PRDIYDLMCDCWKRDQTMRPTF 207
            + +Y+LM  CWK     RP+F
Sbjct: 227 SQSVYELMQHCWKERPEDRPSF 248

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 62.0 bits (150), Expect = 2e-11
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 9/98 (9%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C
Sbjct: 213 DRVYTHQSDVWSFGVLMWEIFTL-GGSPYPGIPVEELFKLLKEGHR-------MDKPANC 264

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
             ++Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 265 TNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN 302

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++  S++WSF V LWEI S    +P+   +N++VI+           +  LP    CP 
Sbjct: 202 KFSSDSDIWSFGVVLWEIFSFGL-QPYYGFSNQEVIEMVRK-------RQLLPCSEDCPP 253

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +Y LM +CW+   + RP FK I++ ++
Sbjct: 254 RMYSLMTECWQEGPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 8/84 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI++L  + P+P +  E++    +  Y        + +P  C  +
Sbjct: 206 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIAPERLFNLLKTGYR-------MERPENCSEE 257

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYS 212
           +Y+LM  CWK++   RPTF  I  
Sbjct: 258 MYNLMLTCWKQEPDKRPTFADISK 281

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 59.9 bits (145), Expect = 7e-11
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 180 NKFSIKSDVWAFGVLLWEIATYGM-SPYPGIDLSQVYELLEKGYR-------MERPEGCP 231

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 232 PKVYELMRACWQWNPSDRPSFAEIH 256

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 59.2 bits (143), Expect = 1e-10
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 20/108 (18%)

Query: 29  PRYCLRVLERLGSCHLGEMMICETEDI---------ELDTEKVAV----------RTCRG 69
           PR  LR+ E+LG    GE+ +CE E +         E D + V V          +T R 
Sbjct: 3   PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN 62

Query: 70  DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLN 117
           D L+EI+ +S L++PN++ +LGVC  + P  ++ EY  + GDL Q L+
Sbjct: 63  DFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEY-MENGDLNQFLS 109

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 59.6 bits (144), Expect = 1e-10
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
             R+T QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C
Sbjct: 185 HRRFTHQSDVWSYGVTVWELMTFGA-KPYDGIPAREIPDLLE----KGER---LPQPPIC 236

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             D+Y +M  CW  D   RP F+++     R
Sbjct: 237 TIDVYMIMVKCWMIDSECRPRFRELVDEFSR 267

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 22/111 (19%)

Query: 29  PRYCLRVLERLGSCHLGEMMICETEDIELDTEK-------------VAVRTCRGDS---- 71
           PR  L   E+LG    GE+ +CE E +E   +K             VAV+  R D+    
Sbjct: 3   PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNA 62

Query: 72  ----LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
               L+EI+ +S L+DPN++ +L VC    P  ++ EY  + GDL Q L+ 
Sbjct: 63  RNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEY-MENGDLNQFLSR 112

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 59.3 bits (143), Expect = 2e-10
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 9/91 (9%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KP+ C
Sbjct: 210 DRVYTHQSDVWSFGVLLWEIFTL-GGSPYPGIPVEELFKLLKEGHR-------MDKPANC 261

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             ++Y +M +CW    + RPTFKQ+   + R
Sbjct: 262 THELYMIMRECWHAVPSQRPTFKQLVEDLDR 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWSF V LWEI SL    P+P +  +E+  +  +           +  P     
Sbjct: 252 YTTQSDVWSFGVLLWEIFSL-GASPYPGVQIDEEFCRRLKE-------GTRMRAPEYATP 303

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           +IY +M DCW  +   RPTF ++
Sbjct: 304 EIYSIMLDCWHNNPEDRPTFSEL 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 16/94 (17%)

Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-----------LPK 181
           S+VWSF VTL+E+L+ C  K  P    E++I   +     G++ V            LP 
Sbjct: 191 SDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQ-----GQMTVVRLIELLERGMRLPC 245

Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           P  CP+++Y LM +CW+ +   RPTF+ +   +K
Sbjct: 246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 15/86 (17%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLPKPSL 184
           YT +S+VWS+ + LWEI SL    P+P +  +    ++I+    M            P  
Sbjct: 293 YTFESDVWSYGILLWEIFSL-GSSPYPGMPVDSKFYKMIKEGYRML----------SPEC 341

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQI 210
            P ++YD+M  CW  D   RPTFKQI
Sbjct: 342 APSEMYDIMKSCWDADPLKRPTFKQI 367

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 17/94 (18%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPF---PHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           YT QS+VWS+ VT+WE+++    KP+   P      +++  E           LP+P +C
Sbjct: 188 YTHQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGER----------LPQPPIC 236

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
             D+Y +M  CW  D   RP F+++   +S M R
Sbjct: 237 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 58.5 bits (141), Expect = 3e-10
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  
Sbjct: 187 KFTHQSDVWSYGVTIWELMTF-GGKPYDGIPTREIPDLLEK----GER---LPQPPICTI 238

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D   RP FK++ +   R
Sbjct: 239 DVYMVMVKCWMIDADSRPKFKELAAEFSR 267

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 58.0 bits (140), Expect = 3e-10
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VW+F V +WE+ SL +  P+    N +     E +  G  L     +P L   
Sbjct: 177 KFSSKSDVWAFGVLMWEVYSLGK-MPYERFNNSET---VEKVSQGLRLY----RPHLASE 228

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTF+Q+ S
Sbjct: 229 KVYAIMYSCWHEKAEERPTFQQLLS 253

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRD-KPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++T +S+VWSF V LWE+++  R   P+P + +  +     ++  G  L     +P  CP
Sbjct: 178 KFTTKSDVWSFGVLLWELMT--RGAPPYPDVDSFDITV---YLLQGRRL----LQPEYCP 228

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYS 212
             +Y++M  CW     MRPTF ++ S
Sbjct: 229 DPLYEVMLSCWHPKPEMRPTFSELVS 254

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 57.3 bits (138), Expect = 7e-10
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  +
Sbjct: 200 YTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 251

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +YDLM  CW+     RP+F QI   + R
Sbjct: 252 VYDLMRQCWREKPYERPSFAQILVSLNR 279

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 43/221 (19%), Positives = 62/221 (28%), Gaps = 77/221 (34%)

Query: 61  KVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           K  ++  R   LREI+ L  L+ PN+V +  V   E   +LVMEY  + GDL   L    
Sbjct: 34  KKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEY-CEGGDLFDLLKKRG 92

Query: 121 NLTRDRDR-YTCQ--------------------SNV------------------------ 135
            L+ D  R Y  Q                     N+                        
Sbjct: 93  RLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK 152

Query: 136 -WSFAVTLW----EILS--------------------LCRDKPFPHLTNEQVI-QNAEHM 169
             +F  T      E+L                     L    PFP       + +     
Sbjct: 153 LTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP 212

Query: 170 YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
                   F P       +  DL+     +D   R T ++ 
Sbjct: 213 KP-----PFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 56.5 bits (136), Expect = 1e-09
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ +T+WE  S  + KP+  +   +V+   E     G+    L  P+ CP 
Sbjct: 174 KFSSRSDVWSYGITMWEAFSYGQ-KPYKKMKGPEVMSFIE----QGKR---LDCPAECPP 225

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y LM DCW      RP F ++   M+
Sbjct: 226 EMYALMKDCWIYKWEDRPNFAKVEERMR 253

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT +S+VWSF V LWEI+SL    P+  +T  ++ +     Y        + KP  C  +
Sbjct: 195 YTTKSDVWSFGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGYR-------MEKPRNCDDE 246

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y+LM  CW+     RP F QI
Sbjct: 247 VYELMRQCWRDRPYERPPFAQI 268

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)

Query: 127 DR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           DR YT +S+VWSF VT+WEI +  +  P+P + N ++    +++  G  L+    +P  C
Sbjct: 188 DRVYTTKSDVWSFGVTMWEIATRGQ-TPYPGVENSEIY---DYLRQGNRLK----QPPDC 239

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIY 211
              +Y LM  CW  +   RP+F+ + 
Sbjct: 240 LDGLYSLMSSCWLLNPKDRPSFETLR 265

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 55.7 bits (134), Expect = 2e-09
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V Q    M   GE    +  P  CP 
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQ-KPYKGMKGNEVTQ----MIESGER---MECPQRCPP 225

Query: 188 DIYDLMCDCWKRDQTMRPTF 207
           ++YDLM  CW      RP F
Sbjct: 226 EMYDLMKLCWTYGVDERPGF 245

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT  S+VWSF + LWEI +L    P+P L  NEQ     +  Y        + KP+    
Sbjct: 318 YTTLSDVWSFGILLWEIFTL-GGTPYPELPMNEQFYNAIKRGYR-------MAKPAHASD 369

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +IY++M  CW+    +RP F Q+   +  
Sbjct: 370 EIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)

Query: 120 DNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL 179
           DNL      YT  S+VWS+ + LWEI SL    P+P +  +    N     Y       +
Sbjct: 313 DNL------YTTLSDVWSYGILLWEIFSL-GGTPYPGMIVDSTFYNKIKSGYR------M 359

Query: 180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
            KP    +++YD+M  CW  +   RP+F  +
Sbjct: 360 AKPDHATQEVYDIMVKCWNSEPEKRPSFLHL 390

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++  S++WS+ V LWE+ S    +P+   +N+ VI+   +       QV LP P  CP 
Sbjct: 202 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVIEMIRNR------QV-LPCPDDCPA 253

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +Y LM +CW    + RP FK I+S ++
Sbjct: 254 WVYTLMLECWNEFPSRRPRFKDIHSRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 310

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 311 MYQTMLDCWHGEPSQRPTFSEL 332

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 55.1 bits (132), Expect = 4e-09
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  +
Sbjct: 188 YTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 239

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +YDLM  CW+     RP+F QI
Sbjct: 240 VYDLMRQCWREKPYERPSFAQI 261

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 44/215 (20%), Positives = 69/215 (32%), Gaps = 80/215 (37%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLT------- 123
           + REIR L  L  PN+V ++     +   +LVMEY  + GDL  +L+    L+       
Sbjct: 45  ARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEY-CEGGDLFDYLSRGGPLSEDEAKKI 103

Query: 124 ------------------RD----------------------RDRYTCQSNVWSFAVTLW 143
                             RD                      +      S++ +F  T W
Sbjct: 104 ALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPW 163

Query: 144 ----EILS---------------------LCRDKPFPHLTNEQVIQNAEHMYY---GGEL 175
               E+L                      L    PF      + I +   +     G  L
Sbjct: 164 YMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSG----ENILDQLQLIRRILGPPL 219

Query: 176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
           +   PK S    +  DL+  C  +D + RPT ++I
Sbjct: 220 EFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEI 254

Length = 260

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 55.4 bits (133), Expect = 4e-09
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWSF V LWEI SL    P+P +  NE+  Q  +    G  ++     P     
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGA-SPYPGVQINEEFCQRLKD---GTRMRA----PENATP 304

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           +IY +M  CW+ D   RPTF  +
Sbjct: 305 EIYRIMLACWQGDPKERPTFSAL 327

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCRG--------DSLREIRF 77
           + R  + +   LG    G++ + E   +E + +K  VAV+T +         D  RE   
Sbjct: 2   VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAEL 61

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           L++ Q  N+V   GVCT   PP +V EY  + GDL + L S
Sbjct: 62  LTNFQHENIVKFYGVCTEGDPPIMVFEY-MEHGDLNKFLRS 101

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQ--NAEHMYYGGELQVFLPKPSLC 185
           +Y+ +S+VWSF V +WE+ +  +  PF   +N +V++  +     Y         +P L 
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGK-MPFEKKSNYEVVEMISRGFRLY---------RPKLA 226

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI 210
              +Y++M  CW      RPTF ++
Sbjct: 227 SMTVYEVMYSCWHEKPEGRPTFAEL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 13/98 (13%)

Query: 120 DNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL 179
           D L +D+ +    SN+WS  VT+WE+ +   D+P+P L++EQV++         E  + L
Sbjct: 180 DLLPKDQTKK---SNIWSLGVTMWELFTAA-DQPYPDLSDEQVLK-----QVVREQDIKL 230

Query: 180 PKPSL---CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           PKP L        Y++M  CW   +T RPT ++++  +
Sbjct: 231 PKPQLDLKYSDRWYEVMQFCWLDPET-RPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 128 RYTCQSNVWSFAVTLWEILSLC-RDKPFPHLTNEQV---IQNAEHMYYGGEL---QVFLP 180
           +++  S+VWSF V L+E+ +   +    P      +    Q    +Y+  EL      LP
Sbjct: 187 KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP 246

Query: 181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
            P  CP +IY +M +CW  D + RP+F ++
Sbjct: 247 APPGCPAEIYAIMKECWNNDPSQRPSFSEL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           Y+  S+VWSF V LWE+++L +  P+  +   ++          G     L +P  CP +
Sbjct: 196 YSSASDVWSFGVLLWELMTLGQ-TPYVEIDPFEM----AAYLKDGYR---LAQPINCPDE 247

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           ++ +M  CW  D   RP+F Q+
Sbjct: 248 LFAVMACCWALDPEERPSFSQL 269

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL 81
           IPR  L++  +LG+   GE+           T KVAV+T +         L+E + +  L
Sbjct: 3   IPRESLKLERKLGAGQFGEVW----MGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKL 58

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           +   LV +  VC+ E+P ++V EY ++ G L+  L S +
Sbjct: 59  RHDKLVQLYAVCSEEEPIYIVTEYMSK-GSLLDFLKSGE 96

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 50.7 bits (122), Expect = 8e-08
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 72  LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           LREI  L  L  PN+V + GV   E   +LVMEY  + G L   L  
Sbjct: 39  LREIEILKKLNHPNIVKLYGVFEDENHLYLVMEY-CEGGSLKDLLKE 84

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE--TEDIELDTEKVAVRT--------CRGDSLREIRF 77
           IP   +R LE LG    G++   E    +  L    VA++T         + +  +E   
Sbjct: 2   IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           +S LQ PN+V +LGVCT EQP  ++ EY A  GDL + L
Sbjct: 62  MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAH-GDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 50.7 bits (121), Expect = 1e-07
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE-HMYYGGELQVF-----LPKPSLCP 186
           S+VWSF VTL+E+L+ C  +  P     ++I      M     ++V      LP+P  CP
Sbjct: 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCP 252

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQI 210
            ++Y LM  CW+   + R TF+ +
Sbjct: 253 EEVYQLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 12/90 (13%)

Query: 37  ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVS 88
           ER+G  + GE+    +  +  D   VAV++CR           L+E R L     PN+V 
Sbjct: 1   ERIGRGNFGEVF---SGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 57

Query: 89  ILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++GVCT +QP ++VME   Q GD +  L +
Sbjct: 58  LIGVCTQKQPIYIVMEL-VQGGDFLTFLRT 86

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 10/85 (11%)

Query: 130 TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL---CP 186
           T +SNVWS  VT+WE+  L   +P+ HL++EQV+      Y   E Q+ LPKP L     
Sbjct: 187 TKESNVWSLGVTIWELFEL-GSQPYRHLSDEQVLT-----YTVREQQLKLPKPRLKLPLS 240

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
              Y++M  CW + +  RP+ ++++
Sbjct: 241 DRWYEVMQFCWLQPE-QRPSAEEVH 264

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 26/117 (22%)

Query: 96  EQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFP 155
           E+ PW+  E            N   +LT   D+       WSF  TL EI S   ++P  
Sbjct: 166 ERIPWIAPEC---------IRNGQASLTIAADK-------WSFGTTLLEICSNG-EEPLS 208

Query: 156 HLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
            L++       E  Y   + Q  LP P      + +L+  CW  D T RP+F+ I  
Sbjct: 209 TLSS----SEKERFY---QDQHRLPMPDCAE--LANLINQCWTYDPTKRPSFRAILR 256

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 12/99 (12%)

Query: 29  PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL-------REIRFLSSL 81
           PR    +  +LGS + GE+     E +  +  +VA++  + D L       +E++ L  L
Sbjct: 4   PREEFTLERKLGSGYFGEVW----EGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRL 59

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           +  +L+S+  VC+  +P +++ E   + G L+  L S +
Sbjct: 60  RHKHLISLFAVCSVGEPVYIITELMEK-GSLLAFLRSPE 97

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 47.8 bits (114), Expect = 9e-07
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 9/69 (13%)

Query: 61  KVAVRTCRGDS--------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDL 112
           +VAV+TCR           L+E   L     PN+V ++GVC  +QP ++VME     G L
Sbjct: 21  EVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMEL-VPGGSL 79

Query: 113 VQHLNSADN 121
           +  L    N
Sbjct: 80  LTFLRKKKN 88

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           I    L++   +G    G++M+ +        +KVAV+  + DS      L E   +++L
Sbjct: 3   INSKELKLGATIGKGEFGDVMLGDYRG-----QKVAVKCLKDDSTAAQAFLAEASVMTTL 57

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           + PNLV +LGV     P ++V EY A+ G LV +L S
Sbjct: 58  RHPNLVQLLGVVLQGNPLYIVTEYMAK-GSLVDYLRS 93

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDT----------EKVAVRTCRGDSLREIRF 77
            PR  L+ +  LG    GE+ + + + IE +           +K      + +  RE+  
Sbjct: 2   FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDM 61

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
              L   N+V +LG+C   +P ++++EY   LGDL Q L
Sbjct: 62  FRKLSHKNVVRLLGLCREAEPHYMILEY-TDLGDLKQFL 99

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           I R  +++L +LG+   GE+     E +  +T  VAV+T +  +      L E + +  L
Sbjct: 3   IDRTSIQLLRKLGAGQFGEVW----EGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL 58

Query: 82  QDPNLVSILGVCTGEQPPWLVME 104
           + P L+ +  VCT E+P ++V E
Sbjct: 59  RHPKLIQLYAVCTLEEPIYIVTE 81

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 45.6 bits (108), Expect = 6e-06
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)

Query: 62  VAVRTCRGDS------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
           VAV+T + D+      L+E   +  ++ PNLV +LGVCT E P +++ E+    G+L+ +
Sbjct: 34  VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-GNLLDY 92

Query: 116 LNSAD 120
           L   +
Sbjct: 93  LRECN 97

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 8/55 (14%)

Query: 58  DTEKVAVRTCRGD--------SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME 104
           D   VAV+TC+ D         L E R L     PN+V ++GVCT  QP ++VME
Sbjct: 18  DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVME 72

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 122 LTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK 181
           +T ++ +    SNVW+  VTLWE+      +P+ HL++ +V+ +        + QV L K
Sbjct: 181 ITAEQTKP---SNVWALGVTLWELFE-NAAQPYSHLSDREVLNHVIK-----DQQVKLFK 231

Query: 182 PSL---CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           P L        Y+++  CW   +  R T ++++  +
Sbjct: 232 PQLELPYSERWYEVLQFCWLSPEK-RATAEEVHRLL 266

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 12/102 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCRGDS--------LREIRF 77
           +PR  L + + LG    G+++  E   ++   E   VAV+  + D+        + E+  
Sbjct: 9   LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEM 68

Query: 78  LSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           +  + +  N++++LGVCT E P ++V+EY A  G+L   L +
Sbjct: 69  MKMIGKHKNIINLLGVCTQEGPLYVVVEYAAH-GNLRDFLRA 109

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELD-TEKVAVRTCR--------GDSLREIRFL 78
           +P   +R +E LG C  G++         +D  + VA++T +        G+  +E   +
Sbjct: 2   LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLM 61

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           + L  PN+V +LGV T EQP  ++ EY  Q GDL + L
Sbjct: 62  AELHHPNIVCLLGVVTQEQPVCMLFEYLNQ-GDLHEFL 98

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT + +++S  V LWEI +     PF +LT +++     +          L  P  CP +
Sbjct: 199 YTIKDDIYSLGVVLWEIFT--GKIPFENLTTKEIYDLIINKNNS------LKLPLDCPLE 250

Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNL 224
           I  ++  C   D   RP  K+I   +   + YK  +
Sbjct: 251 IKCIVEACTSHDSIKRPNIKEILYNL---SLYKFYI 283

Length = 283

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 11/97 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           IPR  ++++++LG+   GE+ +    +    + KVAV+T +  +      L E   + +L
Sbjct: 3   IPRESIKLVKKLGAGQFGEVWMGYYNN----STKVAVKTLKPGTMSVQAFLEEANLMKTL 58

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           Q   LV +  V T E+P +++ EY A+ G L+  L S
Sbjct: 59  QHDKLVRLYAVVTKEEPIYIITEYMAK-GSLLDFLKS 94

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 39  LGSCHLGEMMICETEDIELDTE---KVAVRTCRGDS--------LREIRFLSSLQDPNLV 87
           LGS   GE+      DI        +VAV+T R  +        L+E   +S+   PN+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 88  SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA 119
            +LGVC   +P +++ME   + GDL+ +L  A
Sbjct: 63  KLLGVCLLNEPQYIIMEL-MEGGDLLSYLRDA 93

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           +LREI  L  L+ PN+V +L V   E+  +LV EY
Sbjct: 45  ALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 10/63 (15%)

Query: 62  VAVRTCRGDSLREIR--FLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLV 113
           VAV+TC+  +   +R  FL           P++V ++GV T E P W+VME  A LG+L 
Sbjct: 37  VAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-ENPVWIVMEL-APLGELR 94

Query: 114 QHL 116
            +L
Sbjct: 95  SYL 97

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           +PR  L+++++LG+   GE+ +           KVA+++ +  S      L E   +  L
Sbjct: 3   VPRETLKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGSMSPEAFLAEANLMKQL 58

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           Q P LV +  V T ++P +++ EY    G LV  L + +
Sbjct: 59  QHPRLVRLYAVVT-QEPIYIITEYMEN-GSLVDFLKTPE 95

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 18/108 (16%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL--CP 186
           Y+  S+VWS  +TL E+       PFP    E  +   E + Y     V +P P L   P
Sbjct: 180 YSITSDVWSLGLTLLEVAQNRF--PFPP-EGEPPLGPIELLSY----IVNMPNPELKDEP 232

Query: 187 -------RDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRSTNYKSNLD 225
                   +  D +  C ++D T RPT   +    ++K     K N+ 
Sbjct: 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKKKVNMA 280

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 55  IELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQ 114
           I L+TE   V +    ++REI  L  L  PN+V +L V   E   +LV E+     DL +
Sbjct: 32  IRLETEDEGVPST---AIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDL--DLKK 86

Query: 115 HLNSADNLTRDRD 127
           +++S+     D  
Sbjct: 87  YMDSSPLTGLDPP 99

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 13/85 (15%)

Query: 33  LRVLERLGSCHLGEMMICETEDIELD--TEKVAVRTCRGDSL--------REIRFLSSLQ 82
           L+ +++LG  H G++ +C   D   D   E+VAV++              REI  L +L 
Sbjct: 6   LKFIKQLGEGHFGKVELC-RYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD 64

Query: 83  DPNLVSILGVCT--GEQPPWLVMEY 105
             N+V   GVC   G +   L+MEY
Sbjct: 65  HENIVKYKGVCEKPGGRSLRLIMEY 89

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 61  KVAVRTCRGDSLREIRF------LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQ 114
            VA++  R  ++ E  F      +  L  PNLV + GVCT ++P ++V EY A  G L+ 
Sbjct: 30  DVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA-NGCLLN 88

Query: 115 HL 116
           +L
Sbjct: 89  YL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 12/65 (18%)

Query: 61  KVAVRTCRGDS--------LREIRFLSSLQDPNLVSILGVCTGEQPPW-LVMEYPAQLGD 111
           +VAV+T + +         LRE   ++ L  P +V ++GVC G   P  LVME  A LG 
Sbjct: 25  EVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--EPLMLVMEL-APLGP 81

Query: 112 LVQHL 116
           L+++L
Sbjct: 82  LLKYL 86

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 10/89 (11%)

Query: 39  LGSCHLGEMMICETEDIELDTEK--VAVRT-------CRGDSLREIRFLSSLQDPNLVSI 89
           LG    G++ + E  ++  + +K  VAV+         R D  RE   L+ LQ  ++V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 90  LGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
            GVCT  +P  +V EY  + GDL + L S
Sbjct: 73  YGVCTEGRPLLMVFEY-MRHGDLNRFLRS 100

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 55  IELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQ 114
           I LDTE   V +    ++REI  L  L  PN+V +L V   E   +LV E+  Q  DL +
Sbjct: 33  IRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ--DLKK 87

Query: 115 HLNSA 119
            ++++
Sbjct: 88  FMDAS 92

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)

Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
           A     D    +  ++ WSF  TLWEI   C +   P L ++ + +  +  +Y G+  + 
Sbjct: 176 APECVEDSKNLSIAADKWSFGTTLWEI---CYNGEIP-LKDKTLAE--KERFYEGQCMLV 229

Query: 179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
            P    C +++ DLM  C   D   RP F+ I
Sbjct: 230 TPS---C-KELADLMTHCMNYDPNQRPFFRAI 257

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           +R RY+ ++++WS  V L+E+L+L R  PF   +  +++Q    + YG     + P P  
Sbjct: 244 ERKRYSKKADMWSLGVILYELLTLHR--PFKGPSQREIMQ---QVLYGK----YDPFPCP 294

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIY--SFMKRSTN 219
               +  L+     ++  +RPT +Q+    F+K   N
Sbjct: 295 VSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVAN 331

Length = 478

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 70  DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           D ++E+RFL  L+ PN +   G    E   WLVMEY
Sbjct: 61  DIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 12/77 (15%)

Query: 50  CETEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQDPNLVSILGVCTGEQPPWL 101
               + E    +VA++T   ++        L E   +      ++V +LGV +  QP  +
Sbjct: 30  VVKGEPET---RVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86

Query: 102 VMEYPAQLGDLVQHLNS 118
           VME  A+ GDL  +L S
Sbjct: 87  VMELMAK-GDLKSYLRS 102

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 70  DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           D L E   L  +  P+++ + G C+ + P  L++EY A+ G L   L
Sbjct: 49  DLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY-AKYGSLRSFL 94

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 12/80 (15%)

Query: 57  LDTEKVAVRTCRGDS--LREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
               +V V+  R  +    +++FL       SLQ  NL+  LG CT   P  LVME+   
Sbjct: 20  YTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF-CP 78

Query: 109 LGDLVQHLNS---ADNLTRD 125
           LGDL  +L S   A+ +T D
Sbjct: 79  LGDLKGYLRSCRKAELMTPD 98

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 16/76 (21%)

Query: 60  EKVAVRTCRGD---------SLREIRFLSSLQDPNLVSILGVCTGEQ--PPWLVMEYPAQ 108
           E VA++  R D         SLREI  L +L+ PN+V +  V  G+     +LVMEY  Q
Sbjct: 33  EIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ 92

Query: 109 LGDLVQHLNSADNLTR 124
             DL   L   DN+  
Sbjct: 93  --DLASLL---DNMPT 103

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 37.4 bits (86), Expect = 0.004
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRT-------CRGDSLREIRFL 78
           I R+ + +   LG    G++ + E  ++  E D   VAV+T        R D  RE   L
Sbjct: 2   IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 61

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++LQ  ++V   GVC    P  +V EY  + GDL + L +
Sbjct: 62  TNLQHEHIVKFYGVCVEGDPLIMVFEY-MKHGDLNKFLRA 100

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 33  LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRGDSL-------REIRFLSSLQDP 84
           L+ +++LG  + G + +C  + ++ +T E VAV+  +  +        REI  L SLQ  
Sbjct: 6   LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHD 65

Query: 85  NLVSILGVC--TGEQPPWLVMEY 105
           N+V   GVC   G +   LVMEY
Sbjct: 66  NIVKYKGVCYSAGRRNLRLVMEY 88

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 136 WSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD 195
           WSF  TL EI   C D   P    E+     E  Y   E +  LP+PS C  ++  L+  
Sbjct: 205 WSFGTTLLEI---CFDGEVP--LKERTPSEKERFY---EKKHRLPEPS-CK-ELATLISQ 254

Query: 196 CWKRDQTMRPTFKQI 210
           C   + T RP+F+ I
Sbjct: 255 CLTYEPTQRPSFRTI 269

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 70  DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           D ++E++FL  L+ PN +   G    E   WLVMEY
Sbjct: 67  DIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
KOG0197|consensus	468		100.0
KOG1026|consensus	774		100.0
KOG1095|consensus	1025		100.0
KOG4278|consensus	1157		100.0
KOG0196|consensus	996		100.0
KOG1094|consensus	807		100.0
KOG0194|consensus	474		100.0
KOG4257|consensus	974		100.0
KOG0192|consensus	362		100.0
KOG4721|consensus	904		100.0
KOG0199|consensus	1039		100.0
KOG0193|consensus	678		100.0
KOG0575|consensus	592		99.98
PHA02988	283	hypothetical protein; Provisional	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
KOG0581|consensus	364		99.97
KOG0615|consensus	475		99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
KOG0595|consensus	429		99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
KOG0200|consensus	609		99.97
KOG0591|consensus	375		99.96
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
KOG0580|consensus	281		99.96
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.96
KOG1025|consensus	1177		99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
KOG0592|consensus	604		99.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
KOG0598|consensus	357		99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
KOG0616|consensus	355		99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
KOG1989|consensus	738		99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.95
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.95
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.95
KOG0201|consensus	467		99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.95
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
KOG1187|consensus	361		99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.95
KOG0582|consensus	516		99.95
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.95
KOG0588|consensus	786		99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
KOG1024|consensus	563		99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
KOG0583|consensus	370		99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.95
KOG0578|consensus	550		99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
KOG0589|consensus	426		99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.94
KOG0605|consensus	550		99.94
KOG0611|consensus	668		99.94
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
KOG0694|consensus	694		99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
KOG4717|consensus	864		99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
KOG0198|consensus	313		99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
KOG0593|consensus	396		99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
KOG0577|consensus	948		99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
KOG0661|consensus	538		99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
KOG0597|consensus	808		99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.93
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.93
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.93
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.93
KOG0610|consensus	459		99.93
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.93
PTZ00036	440	glycogen synthase kinase; Provisional	99.93
KOG0574|consensus	502		99.93
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
KOG0032|consensus	382		99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
KOG0659|consensus	318		99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.92
KOG2345|consensus	302		99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.92
KOG2052|consensus	513		99.92
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.92
KOG0579|consensus	1187		99.92
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.92
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.92
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.92
KOG4279|consensus	1226		99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.92
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.92
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.92
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.92
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.92
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
KOG0600|consensus	560		99.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.91
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.91
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.91
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.91
KOG0585|consensus	576		99.91
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.91
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.91
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.91
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.91
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.91
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.91
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.91
KOG0033|consensus	355		99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
PHA03207	392	serine/threonine kinase US3; Provisional	99.91
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.91
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.91
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.91
KOG0586|consensus	596		99.91
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.91
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.91
PHA03209	357	serine/threonine kinase US3; Provisional	99.91
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.9
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.9
KOG0663|consensus	419		99.9
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.9
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.9
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.9
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.9
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.9
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.9
KOG0596|consensus	677		99.9
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.9
PHA03211	461	serine/threonine kinase US3; Provisional	99.9
PLN00009	294	cyclin-dependent kinase A; Provisional	99.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.9
KOG0658|consensus	364		99.9
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.9
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.9
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.89
KOG0660|consensus	359		99.89
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.89
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.89
PTZ00284	467	protein kinase; Provisional	99.89
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.89
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.89
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.89
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.89
KOG0584|consensus	632		99.89
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.89
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.89
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.89
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.89
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.89
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.89
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.88
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.88
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.88
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.88
KOG3653|consensus	534		99.88
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.88
KOG0690|consensus	516		99.88
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.88
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.88
KOG0599|consensus	411		99.88
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.88
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.88
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.87
PHA03210	501	serine/threonine kinase US3; Provisional	99.87
PHA02882	294	putative serine/threonine kinase; Provisional	99.87
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.87
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.87
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.87
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.87
KOG0667|consensus	586		99.87
KOG0696|consensus	683		99.86
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.86
KOG4645|consensus	1509		99.86
KOG0612|consensus	1317		99.86
KOG0587|consensus	953		99.86
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.85
KOG0604|consensus	400		99.85
KOG4250|consensus	732		99.84
KOG0594|consensus	323		99.84
KOG0603|consensus	612		99.84
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.83
KOG0983|consensus	391		99.83
KOG0607|consensus	463		99.83
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.83
KOG1006|consensus	361		99.82
KOG0195|consensus	448		99.81
KOG0668|consensus	338		99.81
KOG1151|consensus	775		99.8
KOG0614|consensus	732		99.79
KOG0986|consensus	591		99.77
KOG0576|consensus	829		99.77
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.77
KOG1035|consensus	1351		99.77
KOG0662|consensus	292		99.76
KOG4236|consensus	888		99.76
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.75
KOG0695|consensus	593		99.74
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.74
KOG0666|consensus	438		99.74
KOG1027|consensus	903		99.7
KOG0669|consensus	376		99.7
KOG0671|consensus	415		99.69
KOG0608|consensus	1034		99.67
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.66
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.6
KOG0984|consensus	282		99.56
KOG0670|consensus	752		99.54
KOG0664|consensus	449		99.53
KOG1152|consensus	772		99.52
KOG0665|consensus	369		99.48
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.48
KOG1345|consensus	378		99.47
KOG1023|consensus	484		99.44
KOG1290|consensus	590		99.42
KOG1167|consensus	418		99.4
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.19
PLN00181	793	protein SPA1-RELATED; Provisional	99.17
KOG1240|consensus	1431		99.07
KOG0603|consensus	612		99.03
KOG1164|consensus	322		99.02
KOG1163|consensus	341		99.0
PRK09188	365	serine/threonine protein kinase; Provisional	98.94
KOG1165|consensus	449		98.86
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.83
PRK10345	210	hypothetical protein; Provisional	98.72
PRK14879	211	serine/threonine protein kinase; Provisional	98.59
KOG0590|consensus	601		98.57
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.54
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.53
KOG4158|consensus	598		98.51
KOG1166|consensus	974		98.47
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.44
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.38
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.32
KOG1266|consensus	458		98.25
KOG0606|consensus	1205		98.18
KOG1033|consensus	516		98.1
smart00090	237	RIO RIO-like kinase.	98.02
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.93
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.87
PRK12274	218	serine/threonine protein kinase; Provisional	97.79
KOG1093|consensus	725		97.75
KOG0590|consensus	601		97.64
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.53
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.52
KOG1243|consensus	690		97.39
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.34
KOG0601|consensus	524		97.24
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.14
KOG0606|consensus	1205		96.95
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.93
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.53
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.45
KOG0601|consensus	524		95.97
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.34
KOG3741|consensus	655		94.95
KOG3087|consensus	229		94.75
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.47
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	94.34
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.2
PRK10593	297	hypothetical protein; Provisional	93.68
KOG1235|consensus	538		93.42
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.78
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	91.62
COG0478	304	RIO-like serine/threonine protein kinase fused to	91.32
COG4248	637	Uncharacterized protein with protein kinase and he	91.04
PLN02876	822	acyl-CoA dehydrogenase	90.14
KOG2137|consensus	700		89.59
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	89.55
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	89.45
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	89.21
PF01636	239	APH: Phosphotransferase enzyme family This family	87.98
KOG1033|consensus	516		86.89
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	85.3
KOG4258|consensus	1025		84.61
KOG1035|consensus	1351		83.37

>KOG0197|consensus

Probab=100.00  E-value=2.7e-41  Score=279.87  Aligned_cols=182  Identities=35%  Similarity=0.712  Sum_probs=168.9

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.|+|+++.+.+++.||+|.||.|++|.|.    ....||+|.++      +.|.+|++++++++|+|||+++|++..+
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~----~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~  273 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWN----GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ  273 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEc----CCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence            6899999999999999999999999999996    45689999885      6689999999999999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      .+++|||||+ +.|+|.+||..+                               |||+                      
T Consensus       274 ~piyIVtE~m-~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  274 EPIYIVTEYM-PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL  352 (468)
T ss_pred             CceEEEEEec-ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence            8999999999 999999999873                               4554                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             +..+.|+.|||||||||+||||+|. |..||.++++.++...+.++.       +++
T Consensus       353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~-G~~py~~msn~ev~~~le~Gy-------Rlp  424 (468)
T KOG0197|consen  353 IGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTY-GRVPYPGMSNEEVLELLERGY-------RLP  424 (468)
T ss_pred             cCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhcc-CCCCCCCCCHHHHHHHHhccC-------cCC
Confidence                                   6677899999999999999999998 579999999999999999887       899


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .|..||.++.++|..||..+|++||||+.+...|+.+
T Consensus       425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~  461 (468)
T KOG0197|consen  425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF  461 (468)
T ss_pred             CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999988

>KOG1026|consensus

Probab=100.00  E-value=2e-39  Score=281.02  Aligned_cols=190  Identities=35%  Similarity=0.641  Sum_probs=171.4

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCccee
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSI   89 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~   89 (228)
                      -+..+..+|+++++.+.+.||+|.||+||+|......  .....||||.++        .+|+||++++..++|+|||++
T Consensus       475 ~~~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrL  554 (774)
T KOG1026|consen  475 NPDLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRL  554 (774)
T ss_pred             CCccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEE
Confidence            3456788999999999999999999999999886533  356889999995        679999999999999999999


Q ss_pred             eeeeeCCCCCeEEEeeccccCCHHHHhhhC-------------------------------------------Cccc---
Q psy796           90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------------------DNLT---  123 (228)
Q Consensus        90 ~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------------r~l~---  123 (228)
                      +|+|...++.++|+||+ ..|+|.+||..+                                           |||+   
T Consensus       555 lGVC~~~~P~~MvFEYm-~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN  633 (774)
T KOG1026|consen  555 LGVCREGDPLCMVFEYM-DHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN  633 (774)
T ss_pred             EEEEccCCeeEEEEEec-ccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence            99999999999999999 889999999754                                           4444   


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 +..+.||.+||||||||++||+++.+ ..||.+.++.
T Consensus       634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG-~QPy~glSn~  712 (774)
T KOG1026|consen  634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYG-KQPYYGLSNQ  712 (774)
T ss_pred             ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccc-cCcccccchH
Confidence                                                       67889999999999999999999985 7999999999


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +++..+..+.       .++-|.+||.++++||..||+..|.+||+|.+|...|+...
T Consensus       713 EVIe~i~~g~-------lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~  763 (774)
T KOG1026|consen  713 EVIECIRAGQ-------LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA  763 (774)
T ss_pred             HHHHHHHcCC-------cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence            9999988764       56779999999999999999999999999999999999993

>KOG1095|consensus

Probab=100.00  E-value=4.2e-36  Score=268.53  Aligned_cols=185  Identities=35%  Similarity=0.648  Sum_probs=165.1

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCC--ceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELD--TEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~--~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      .++++++++++.+.||+|.||.||.|.+......  ...||||.++        .+|.+|+.+++.++||||++++|++.
T Consensus       686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL  765 (1025)
T ss_pred             cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence            4668899999999999999999999999875433  4669999994        67999999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------------Cccc---------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------DNLT---------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~---------------  123 (228)
                      +..+.+|++||+ ++|+|..||+..                                    |||+               
T Consensus       766 ~~~~~~i~leyM-~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa  844 (1025)
T KOG1095|consen  766 DSGPPLILLEYM-EGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA  844 (1025)
T ss_pred             CCCCcEEEehhc-ccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence            999999999999 999999999754                                    3333               


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     +....||.|+|||||||++||++|+ |..||.+.++.++...+..+-  
T Consensus       845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifsl-G~~PY~~~~n~~v~~~~~~gg--  921 (1025)
T KOG1095|consen  845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSL-GATPYPSRSNFEVLLDVLEGG--  921 (1025)
T ss_pred             ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhC-CCCCCCCcchHHHHHHHHhCC--
Confidence                                           5567899999999999999999999 579999999999888666543  


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                           +++.|..|++.++++|.+||+.+|++||+|..|+..+..+.
T Consensus       922 -----RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  922 -----RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             -----ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence                 78899999999999999999999999999999999999883

>KOG4278|consensus

Probab=100.00  E-value=5.9e-36  Score=252.03  Aligned_cols=186  Identities=30%  Similarity=0.565  Sum_probs=170.8

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      .+..+.|++.+.++.+...||-|.||.||.|.|++   ....||||.++      ++|.+|+.+++.++|||+|+++|+|
T Consensus       256 SPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk---yslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC  332 (1157)
T KOG4278|consen  256 SPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC  332 (1157)
T ss_pred             cCCcchhhccchheeeeeccCCCcccceeeeeeec---cceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh
Confidence            34568999999999999999999999999999987   78999999997      5699999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------  123 (228)
                      .-+.++|||+||+ .+|+|.+||+..                               |||+                   
T Consensus       333 T~EpPFYIiTEfM-~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGL  411 (1157)
T KOG4278|consen  333 THEPPFYIITEFM-CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGL  411 (1157)
T ss_pred             ccCCCeEEEEecc-cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccch
Confidence            9999999999999 999999999765                               3443                   


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                +-.+.|+.|+|||+|||+|||+.|+ |-.||.+.+..++...+..++       
T Consensus       412 sRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATY-GMsPYPGidlSqVY~LLEkgy-------  483 (1157)
T KOG4278|consen  412 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYGLLEKGY-------  483 (1157)
T ss_pred             hhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhc-CCCCCCCccHHHHHHHHhccc-------
Confidence                                      5566789999999999999999998 479999999999999988876       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++..|.+|++.++.||.+||+..|.+||+|.++.+.|+.+
T Consensus       484 RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  484 RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            7888999999999999999999999999999999999887

>KOG0196|consensus

Probab=100.00  E-value=8.3e-36  Score=255.94  Aligned_cols=184  Identities=30%  Similarity=0.614  Sum_probs=168.0

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..+|+.+.+.+.++||.|.||.|+.|+++........||||.+|        .+|+.|+.++.++.||||+++-|+....
T Consensus       623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks  702 (996)
T KOG0196|consen  623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS  702 (996)
T ss_pred             hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence            35788899999999999999999999998655456889999995        7799999999999999999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      .+++||+||+ ++|+|+.||+.+                              |||+                       
T Consensus       703 ~PvMIiTEyM-ENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  703 KPVMIITEYM-ENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             ceeEEEhhhh-hCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence            9999999999 999999999876                              4444                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              +....||.+||||||||++||.++. |..||-++++.++...+..++       ++
T Consensus       782 edd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSy-GERPYWdmSNQdVIkaIe~gy-------RL  853 (996)
T KOG0196|consen  782 EDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY-GERPYWDMSNQDVIKAIEQGY-------RL  853 (996)
T ss_pred             ccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEeccc-CCCcccccchHHHHHHHHhcc-------CC
Confidence                                    4556799999999999999998887 589999999999999998877       78


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      |.|-.||..+..||..||++|-.+||.|.+|+..|+++
T Consensus       854 PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  854 PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998

>KOG1094|consensus

Probab=100.00  E-value=4.5e-35  Score=244.83  Aligned_cols=190  Identities=41%  Similarity=0.826  Sum_probs=172.6

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ....+++++.+.+++.||+|.||.|+++...    ....||||+++        .+|.+|+++|.+++||||++++|+|.
T Consensus       530 ~al~EfPRs~L~~~ekiGeGqFGEVhLCeve----g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~  605 (807)
T KOG1094|consen  530 PALVEFPRSRLRFKEKIGEGQFGEVHLCEVE----GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV  605 (807)
T ss_pred             cchhhcchhheehhhhhcCcccceeEEEEec----CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence            3567899999999999999999999999885    46999999995        67999999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                      .+++.++|+||+ ++|+|.+||..+                               ||++                    
T Consensus       606 ~DePicmI~EYm-EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgms  684 (807)
T KOG1094|consen  606 QDDPLCMITEYM-ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMS  684 (807)
T ss_pred             cCCchHHHHHHH-hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccc
Confidence            999999999999 999999999766                               2222                    


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                +..+.||.+||||+|||++||+++.|+..||......+...+............
T Consensus       685 R~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~  764 (807)
T KOG1094|consen  685 RNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV  764 (807)
T ss_pred             cccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce
Confidence                                      456689999999999999999999999999999999999999888887777777


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+..|..|+.+++.++..||..+..+||+++++...|++.
T Consensus       765 ~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  765 VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            7888999999999999999999999999999999999875

>KOG0194|consensus

Probab=100.00  E-value=2e-34  Score=241.96  Aligned_cols=192  Identities=28%  Similarity=0.475  Sum_probs=165.7

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCc-eeEEeecch----------HHHHHHHHHHhhCCCCCcceee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCR----------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~-~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      ....|++.-+++.+.+.||+|.||.||+|.+....... ..||||..+          .++++|++++++++|+|||+++
T Consensus       148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y  227 (474)
T KOG0194|consen  148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY  227 (474)
T ss_pred             cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            45789999999999999999999999999998643211 238999885          4589999999999999999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------  123 (228)
                      |+...+.+++++||+| .||+|.+||...                              |||+                 
T Consensus       228 GVa~~~~Pl~ivmEl~-~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDF  306 (474)
T KOG0194|consen  228 GVAVLEEPLMLVMELC-NGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDF  306 (474)
T ss_pred             EEEcCCCccEEEEEec-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcc
Confidence            9999999999999999 999999999876                              3333                 


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH-HHhhhCCCc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA-EHMYYGGEL  175 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~  175 (228)
                                                 +....|+.++|||||||++||+++-+ ..||.+....++..++ ..+.     
T Consensus       307 GLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g-~~Py~g~~~~~v~~kI~~~~~-----  380 (474)
T KOG0194|consen  307 GLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG-AEPYPGMKNYEVKAKIVKNGY-----  380 (474)
T ss_pred             ccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC-CCCCCCCCHHHHHHHHHhcCc-----
Confidence                                       45557899999999999999999974 5699999999998888 4343     


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                        +.+.|...+.++..++.+||..+|++||+|.++.+.|+.+.....
T Consensus       381 --r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  381 --RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             --cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence              566777889999999999999999999999999999999944433

>KOG4257|consensus

Probab=100.00  E-value=8.9e-35  Score=244.77  Aligned_cols=191  Identities=31%  Similarity=0.623  Sum_probs=169.2

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEecc-CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcc
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv   87 (228)
                      .++.|..-.+++.++.+.+.+.||.|.||.||.|.+... .+....||||.++        +.|..|+.++++++||||+
T Consensus       375 ty~~P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIi  454 (974)
T KOG4257|consen  375 TYSTPTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHII  454 (974)
T ss_pred             cccCCCCCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchh
Confidence            456677778999999999999999999999999999865 3355789999996        5699999999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------  123 (228)
                      +++|++... +.+||||.+ +.|.|.+||..+                              ||++              
T Consensus       455 kLIGv~~e~-P~WivmEL~-~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKL  532 (974)
T KOG4257|consen  455 KLIGVCVEQ-PMWIVMELA-PLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKL  532 (974)
T ss_pred             heeeeeecc-ceeEEEecc-cchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeee
Confidence            999999655 789999999 999999999876                              3333              


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     +...+||.+||||-|||.+||++.. |-.||.+..+.++...+.++.  
T Consensus       533 aDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~l-GvkPfqgvkNsDVI~~iEnGe--  609 (974)
T KOG4257|consen  533 ADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSL-GVKPFQGVKNSDVIGHIENGE--  609 (974)
T ss_pred             cccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHh-cCCccccccccceEEEecCCC--
Confidence                                           5566899999999999999999998 579999999998888777654  


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                           ++|.|++||+.++.|+.+||.++|.+||.+.++...|..+
T Consensus       610 -----RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  610 -----RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             -----CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence                 7889999999999999999999999999999999988887

>KOG0192|consensus

Probab=100.00  E-value=1.8e-33  Score=232.36  Aligned_cols=183  Identities=32%  Similarity=0.458  Sum_probs=156.9

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCcee-EEeecch---------HHHHHHHHHHhhCCCCCcceeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEK-VAVRTCR---------GDSLREIRFLSSLQDPNLVSILG   91 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~-vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g   91 (228)
                      ....+.++.+.+.+.+.||+|+||+||+|.|+     +.. ||||.+.         +.|.+|+.+|.+++|||||+++|
T Consensus        32 ~~~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~-----g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G  106 (362)
T KOG0192|consen   32 ELPEEEIDPDELPIEEVLGSGSFGTVYKGKWR-----GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYG  106 (362)
T ss_pred             cccceecChHHhhhhhhcccCCceeEEEEEeC-----CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            34678899999999999999999999999994     555 9999995         27999999999999999999999


Q ss_pred             eeeCCC-CCeEEEeeccccCCHHHHhhh--C------------------------------Cccc---------------
Q psy796           92 VCTGEQ-PPWLVMEYPAQLGDLVQHLNS--A------------------------------DNLT---------------  123 (228)
Q Consensus        92 ~~~~~~-~~~lv~e~~~~~g~L~~~l~~--~------------------------------r~l~---------------  123 (228)
                      ++.++. ..++||||+ ++|+|.++|+.  .                              |||+               
T Consensus       107 ~~~~~~~~~~iVtEy~-~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI  185 (362)
T KOG0192|consen  107 ACTSPPGSLCIVTEYM-PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKI  185 (362)
T ss_pred             EEcCCCCceEEEEEeC-CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEE
Confidence            998887 689999999 99999999976  2                              3333               


Q ss_pred             ------------------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 ------------------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 ------------------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                    +.  ...|+.|+|||||||++|||+|  +..||.+....++...+.....
T Consensus       186 ~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t--~~~Pf~~~~~~~~~~~v~~~~~  263 (362)
T KOG0192|consen  186 ADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLT--GEIPFEDLAPVQVASAVVVGGL  263 (362)
T ss_pred             CCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhcCC
Confidence                                          33  4579999999999999999999  6799999988666655543321


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                            +++.|..++..+..++..||..||..||++.+++..|+.+.
T Consensus       264 ------Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  264 ------RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM  304 (362)
T ss_pred             ------CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence                  45556779999999999999999999999999999999883

>KOG4721|consensus

Probab=100.00  E-value=5.3e-35  Score=244.01  Aligned_cols=187  Identities=28%  Similarity=0.537  Sum_probs=164.5

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ....++.+.|+|+-+.+.=.+.||+|+.|.||+|++     .++.||||.+++....+|..|++++|+||+.|.|+|...
T Consensus       110 e~k~qq~e~WeiPFe~IsELeWlGSGaQGAVF~Grl-----~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqs  184 (904)
T KOG4721|consen  110 EHKQQQEELWEIPFEEISELEWLGSGAQGAVFLGRL-----HNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQS  184 (904)
T ss_pred             ehhhhhhhhccCCHHHhhhhhhhccCcccceeeeec-----cCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCC
Confidence            456677899999999999899999999999999999     679999999999888999999999999999999999888


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      .-.+|||||| ..|.|+..|+..                             |||+                        
T Consensus       185 PcyCIiMEfC-a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~  263 (904)
T KOG4721|consen  185 PCYCIIMEFC-AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS  263 (904)
T ss_pred             ceeEEeeecc-ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence            7778999999 999999988765                             5555                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         +.+.+.+.|+|||||||+||||+|  +..||.+.+...+++-+....      ..++.|..
T Consensus       264 ~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT--~EiPYkdVdssAIIwGVGsNs------L~LpvPst  335 (904)
T KOG4721|consen  264 DKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT--GEIPYKDVDSSAIIWGVGSNS------LHLPVPST  335 (904)
T ss_pred             hhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHh--cCCCccccchheeEEeccCCc------ccccCccc
Confidence                               667789999999999999999999  789999887765543332211      15788999


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      |++.++-|+.+||+..|.+||+|++++.||+..
T Consensus       336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             CchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            999999999999999999999999999999876

>KOG0199|consensus

Probab=100.00  E-value=4.7e-34  Score=242.89  Aligned_cols=180  Identities=31%  Similarity=0.564  Sum_probs=159.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..-.|+.+.+.+.+.||+|.||.|+.|.|.....+.-.||||+++        .+|.+|+.++.+++|+|++++||+..+
T Consensus       103 lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~  182 (1039)
T KOG0199|consen  103 LKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD  182 (1039)
T ss_pred             cceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence            455678888999999999999999999998765566789999995        779999999999999999999999988


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                       .+.++|||.+ +.|+|.+.|++.                               |||+                     
T Consensus       183 -qp~mMV~ELa-plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmR  260 (1039)
T KOG0199|consen  183 -QPAMMVFELA-PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMR  260 (1039)
T ss_pred             -chhhHHhhhc-ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccccee
Confidence             5789999999 999999999873                               3333                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                +....|+.+||||+|||++|||+++ |.-||.+.+..++++++..+-       
T Consensus       261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFty-GEePW~G~~g~qIL~~iD~~e-------  332 (1039)
T KOG0199|consen  261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTY-GEEPWVGCRGIQILKNIDAGE-------  332 (1039)
T ss_pred             ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhcc-CCCCCCCCCHHHHHHhccccc-------
Confidence                                      6667899999999999999999998 589999999999999886432       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.|..|++++++++..||..+|++||||..|.+.
T Consensus       333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            788899999999999999999999999999999743

>KOG0193|consensus

Probab=100.00  E-value=4.2e-33  Score=233.87  Aligned_cols=186  Identities=24%  Similarity=0.415  Sum_probs=157.4

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.|+|+.+.+.+...||+|.||+||+|+|.      -.||||.++         +.|++|+..|++.+|.||+-|.|++.
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh------GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~  458 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH------GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM  458 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc------cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence            899999999999999999999999999996      389999995         66999999999999999999999997


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      +... +||+.+| +|.+|+.+||..                              |||+                     
T Consensus       459 ~p~~-AIiTqwC-eGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  459 NPPL-AIITQWC-EGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             CCce-eeeehhc-cCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccccee
Confidence            7765 9999999 999999998854                              4444                     


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                  .+.++|++.+||||||+++|||++  |..||...+..+++..+.+++.... 
T Consensus       537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELlt--g~lPysi~~~dqIifmVGrG~l~pd-  613 (678)
T KOG0193|consen  537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLT--GELPYSIQNRDQIIFMVGRGYLMPD-  613 (678)
T ss_pred             eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHh--CcCCcCCCChhheEEEecccccCcc-
Confidence                                        667899999999999999999999  7799996666666665655532111 


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                        ....-.+|+.+++.|+..||..++++||.+.+|+..|+.+....+
T Consensus       614 --~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p  658 (678)
T KOG0193|consen  614 --LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP  658 (678)
T ss_pred             --chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence              112246788999999999999999999999999998888844343

>KOG0575|consensus

Probab=99.98  E-value=1.3e-31  Score=225.24  Aligned_cols=169  Identities=20%  Similarity=0.316  Sum_probs=152.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ..|..++.||+|+|++||.++...   .+..||+|++.          +.+.+||++-+++.|||||+++++|++.+++|
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~---tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVY   94 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLD---TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVY   94 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcC---CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceE
Confidence            568889999999999999999855   78999999993          56789999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      |++|+| ++++|..++++.                             |||+                            
T Consensus        95 ivLELC-~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen   95 IVLELC-HRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             EEEEec-CCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence            999999 999999988855                             5555                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      +.....+..+||||+||++|-|+.  |.+||...+..+....+...        ....|..++.
T Consensus       174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~--G~PPFetk~vkety~~Ik~~--------~Y~~P~~ls~  243 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV--GRPPFETKTVKETYNKIKLN--------EYSMPSHLSA  243 (592)
T ss_pred             ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh--CCCCcccchHHHHHHHHHhc--------CcccccccCH
Confidence                            556678899999999999999999  67999999999999888765        4567889999


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++||.++|+.+|.+|||+++|+.+
T Consensus       244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  244 EAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            99999999999999999999999974

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=2.4e-30  Score=209.46  Aligned_cols=182  Identities=24%  Similarity=0.335  Sum_probs=146.9

Q ss_pred             CcccccCCCceee--eeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeee
Q psy796           24 DVVPIPRYCLRVL--ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILG   91 (228)
Q Consensus        24 ~~~~~~~~~~~~~--~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g   91 (228)
                      +.+.|+.++++..  ..||+|++|.||+|.+     ++..||||.++          +.+.+|+.++.+++|+||++++|
T Consensus        11 ~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         11 DIKCIESDDIDKYTSVLIKENDQNSIYKGIF-----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             cceecCHHHcCCCCCeEEeeCCceEEEEEEE-----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            4556666677666  7899999999999988     67899999884          34569999999999999999999


Q ss_pred             eeeC----CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------
Q psy796           92 VCTG----EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------  123 (228)
Q Consensus        92 ~~~~----~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------  123 (228)
                      ++.+    ....+++|||+ ++|+|.+++...                              |||+              
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl  164 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYC-TRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKI  164 (283)
T ss_pred             eEEecccCCCceEEEEEeC-CCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEE
Confidence            9876    34678999999 999999988654                              2222              


Q ss_pred             ---------------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 ---------------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ---------------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                 ..  ...++.++|||||||++|||++  |..||.+.+..++...+.....   
T Consensus       165 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~--g~~Pf~~~~~~~~~~~i~~~~~---  239 (283)
T PHA02988        165 ICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT--GKIPFENLTTKEIYDLIINKNN---  239 (283)
T ss_pred             cccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhcCC---
Confidence                                       11  1467889999999999999999  6799998887776655533211   


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                         ....|..++.++.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       240 ---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        240 ---SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             ---CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence               234455789999999999999999999999999999998753

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=5.6e-31  Score=210.46  Aligned_cols=173  Identities=34%  Similarity=0.653  Sum_probs=139.7

Q ss_pred             ceeeeeecccceeeEEEEEEe-ccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETE-DIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~-~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +++.+.||+|.||.||+|.+. .....+..|+||.++        ..+.+|++.+.+++|+||++++|++...+..++++
T Consensus         1 ~~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    1 IKLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             CEEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccc
Confidence            356789999999999999998 333367899999993        56889999999999999999999999878899999


Q ss_pred             eeccccCCHHHHhhhC--Cccc----------------------------------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA--DNLT----------------------------------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~--r~l~----------------------------------------------------------  123 (228)
                      ||+ ++|+|.++|...  ..+.                                                          
T Consensus        81 e~~-~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   81 EYC-PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             E---TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999 999999999764  1111                                                          


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++||||||+++|||++++ ..||...+..++...+....       ..+.+..++
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~-~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~  231 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLG-KFPFSDYDNEEIIEKLKQGQ-------RLPIPDNCP  231 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTS-SGTTTTSCHHHHHHHHHTTE-------ETTSBTTSB
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc-------cceeccchh
Confidence                             23345789999999999999999963 58898888888777775443       455677899


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ..+.+++.+||..+|.+|||+.+|++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=2.8e-30  Score=207.06  Aligned_cols=182  Identities=28%  Similarity=0.514  Sum_probs=149.1

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +|+..+|++.+.||+|+||.||+|.+......+..||+|.++        ..+.+|+..+..++|+||++++|++...+.
T Consensus         1 ~i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   80 (266)
T cd05064           1 ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT   80 (266)
T ss_pred             CCchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence            356778999999999999999999876433357899999874        357889999999999999999999998889


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++|+|.+++...                              +|++                         
T Consensus        81 ~~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          81 MMIVTEYM-SNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             cEEEEEeC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            99999999 999999988653                              2222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++||+++. |..||.+.+..+....+....       ..+.+.
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  231 (266)
T cd05064         160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSY-GERPYWDMSGQDVIKAVEDGF-------RLPAPR  231 (266)
T ss_pred             cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcC-CCCCcCcCCHHHHHHHHHCCC-------CCCCCC
Confidence                                1234567889999999999998764 468998888777666554321       344567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++..+.+++.+||+.+|.+||++.+|.+.|+++
T Consensus       232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         232 NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            7899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0581|consensus

Probab=99.97  E-value=8.4e-31  Score=209.23  Aligned_cols=174  Identities=22%  Similarity=0.311  Sum_probs=145.6

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      .+..++++...+||+|.-|.||+++++.   ++..+|+|.+.        +.+.+|++++...+||+||.++|+|..+..
T Consensus        75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~---t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~  151 (364)
T KOG0581|consen   75 GISLSDLERLGVLGSGNGGTVYKVRHKP---TGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE  151 (364)
T ss_pred             ccCHHHhhhhhhcccCCCcEEEEEEEcC---CCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence            3455588889999999999999999987   78999999992        667899999999999999999999999885


Q ss_pred             -CeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           99 -PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        99 -~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                       +.|+|||+ .+|+|++++...                              ||+|                        
T Consensus       152 ~isI~mEYM-DgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv  230 (364)
T KOG0581|consen  152 EISICMEYM-DGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV  230 (364)
T ss_pred             eEEeehhhc-CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence             99999999 999999987742                              5666                        


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC-----ChHHHHHHHHHhhhCCCccccCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL-----TNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                        +++..|+.++||||||++++|+.+  |+.||...     +..++...+...-       .+.
T Consensus       231 nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~--GrfP~~~~~~~~~~~~~Ll~~Iv~~p-------pP~  301 (364)
T KOG0581|consen  231 NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAI--GRFPYPPPNPPYLDIFELLCAIVDEP-------PPR  301 (364)
T ss_pred             hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhh--CCCCCCCcCCCCCCHHHHHHHHhcCC-------CCC
Confidence                              778899999999999999999999  56787763     3344555554321       222


Q ss_pred             CCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 KPSL-CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~-~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .|.. +++++++++..|++.||.+|||+.++++|
T Consensus       302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            3454 99999999999999999999999999974

>KOG0615|consensus

Probab=99.97  E-value=4.6e-31  Score=212.97  Aligned_cols=174  Identities=20%  Similarity=0.302  Sum_probs=144.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      -.+.+.+.++||+|+||.|.+|..++   +++.||||++.              .+..+|+++|++++|||||++++++.
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~---tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~  246 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKK---TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE  246 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcc---cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee
Confidence            34557778999999999999999887   89999999994              22479999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      .....|+||||+ .||+|.+++..+                             |||+                      
T Consensus       247 ~~ds~YmVlE~v-~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  247 VPDSSYMVLEYV-EGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             cCCceEEEEEEe-cCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence            998889999999 999999988665                             5555                      


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-HHHHHHHhhhCCCc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-VIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~  175 (228)
                                                 -....+..++|+||+||++|-+++  |.+||.+..... +.+.+..+.+.   
T Consensus       326 AK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs--G~pPFS~~~~~~sl~eQI~~G~y~---  400 (475)
T KOG0615|consen  326 AKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS--GYPPFSEEYTDPSLKEQILKGRYA---  400 (475)
T ss_pred             hhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec--cCCCcccccCCccHHHHHhcCccc---
Confidence                                       112234468999999999999999  789998765544 66777665432   


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                       ..++.+..++++..++|.+++..||++|||+.++++
T Consensus       401 -f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  401 -FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             -ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence             234456778999999999999999999999999986

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=2.7e-29  Score=205.06  Aligned_cols=187  Identities=42%  Similarity=0.798  Sum_probs=146.9

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEecc-------------CCCceeEEeecch--------HHHHHHHHHHhhCCCCCc
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDI-------------ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNL   86 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~-------------~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~ni   86 (228)
                      ++.++|.+.+.||+|+||.||++.+...             ...+..||+|.++        .++.+|+.++.+++|+||
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni   81 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI   81 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe
Confidence            5677899999999999999999986431             1134579999874        458899999999999999


Q ss_pred             ceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------------------------
Q psy796           87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------  119 (228)
Q Consensus        87 v~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------  119 (228)
                      +++++++...+..+++|||+ ++|+|.+++...                                               
T Consensus        82 v~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          82 IRLLGVCVDEDPLCMITEYM-ENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             eEEEEEEecCCceEEEEecC-CCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            99999999888999999999 999998877431                                               


Q ss_pred             -Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 -DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 -r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                       +||+                                              .....++.++||||||+++|||+++++..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence             2222                                              11235678899999999999999877778


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ||...+..+....+...............+..++..+.+++.+||+.+|++|||+.+|.+.|+
T Consensus       241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            998887776665554332222212123345678899999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=2.8e-29  Score=207.87  Aligned_cols=185  Identities=29%  Similarity=0.530  Sum_probs=144.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      .|.|+.++|++.+.||+|+||.||+|.....  ...+..||+|.++        ..+.+|+.++..+ +|+||++++|++
T Consensus         1 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           1 QWEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             CcccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            4789999999999999999999999986321  1145789999984        3478899999999 899999999988


Q ss_pred             eCCC-CCeEEEeeccccCCHHHHhhhC-----------------------------------------------------
Q psy796           94 TGEQ-PPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------------  119 (228)
Q Consensus        94 ~~~~-~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------------  119 (228)
                      ...+ ..+++|||+ ++|+|.+++...                                                     
T Consensus        81 ~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T cd05102          81 TKPNGPLMVIVEFC-KYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP  159 (338)
T ss_pred             cCCCCceEEEEecC-CCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence            7644 578999999 999998887531                                                     


Q ss_pred             --------------------------------------Cccc--------------------------------------
Q psy796          120 --------------------------------------DNLT--------------------------------------  123 (228)
Q Consensus       120 --------------------------------------r~l~--------------------------------------  123 (228)
                                                            |||+                                      
T Consensus       160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~  239 (338)
T cd05102         160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP  239 (338)
T ss_pred             chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence                                                  2232                                      


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-HHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-VIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                              .....++.++||||||+++|||++. +..||.+..... ....+....       ....+..++.++.+++.
T Consensus       240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~-g~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~  311 (338)
T cd05102         240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSL-GASPYPGVQINEEFCQRLKDGT-------RMRAPENATPEIYRIML  311 (338)
T ss_pred             ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhC-CCCCCCCCCccHHHHHHHhcCC-------CCCCCCCCCHHHHHHHH
Confidence                    1133468899999999999999975 468888755432 333232211       23346678899999999


Q ss_pred             HhhccCCCCCCCHHHHHHHHHHHh
Q psy796          195 DCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       195 ~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +||+.+|.+|||+.+|++.|+.+.
T Consensus       312 ~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         312 ACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0595|consensus

Probab=99.97  E-value=1.3e-29  Score=204.41  Aligned_cols=170  Identities=21%  Similarity=0.345  Sum_probs=142.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|.+.+.||+|+||.||+|+++.   .+..||||.+.         +.+..|+.+|+.++|+|||.++++....+.++||
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~---~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKK---SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             cceehhhccCcceEEEEEeEecc---CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            46666779999999999999987   78999999994         3357899999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||| .+|+|.+||++.                             ||||                              
T Consensus        88 MEyC-~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   88 MEYC-NGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             EEeC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence            9999 999999999876                             4555                              


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         ...++|+.|+|+||.|+++||+++  |.+||...+..++...+......     ....+..
T Consensus       167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~--g~~Pf~a~t~~eL~~~~~k~~~~-----~~~~~~~  239 (429)
T KOG0595|consen  167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT--GKPPFDAETPKELLLYIKKGNEI-----VPVLPAE  239 (429)
T ss_pred             chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh--CCCCccccCHHHHHHHHhccccc-----cCchhhh
Confidence                               557799999999999999999999  77999999999988866554321     2223455


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++..+.+++..-++.++.+|-++.+-..
T Consensus       240 ~s~~~~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  240 LSNPLRELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             ccCchhhhhhHHHhcCccccCchHHhhh
Confidence            6677788999999999999977766443

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=4.4e-29  Score=209.64  Aligned_cols=190  Identities=30%  Similarity=0.554  Sum_probs=150.2

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcc
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLV   87 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv   87 (228)
                      .++....|.++.++|++.+.||+|+||.||+|.+...  ...+..||+|.++        ..+.+|+.++..+ +||||+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv  102 (375)
T cd05104          23 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIV  102 (375)
T ss_pred             CCCCccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCccee
Confidence            5666678999999999999999999999999976321  1245789999984        3477899999999 899999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------------------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------------------  119 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------------------  119 (228)
                      +++|++...+..+++|||+ ++|+|.+++...                                                
T Consensus       103 ~l~~~~~~~~~~~lv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  181 (375)
T cd05104         103 NLLGACTVGGPTLVITEYC-CYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPT  181 (375)
T ss_pred             eeeeeeccCCcceeeehhc-cCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccc
Confidence            9999999999999999999 999999888531                                                


Q ss_pred             --------------------------------------------------------Cccc--------------------
Q psy796          120 --------------------------------------------------------DNLT--------------------  123 (228)
Q Consensus       120 --------------------------------------------------------r~l~--------------------  123 (228)
                                                                              +||+                    
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a  261 (375)
T cd05104         182 KADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLA  261 (375)
T ss_pred             ccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccc
Confidence                                                                    2222                    


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCcc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~  176 (228)
                                                .....++.++||||||+++|||+++ +..||...... .....+....      
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~-g~~p~~~~~~~~~~~~~~~~~~------  334 (375)
T cd05104         262 RDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSL-GSSPYPGMPVDSKFYKMIKEGY------  334 (375)
T ss_pred             eeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhc-CCCCCCCCCchHHHHHHHHhCc------
Confidence                                      1223567899999999999999985 46888776544 3333333221      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....|...+.++++|+.+||+.+|++|||+.+|++.|++.
T Consensus       335 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         335 -RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             -cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence             2234556788999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=7.7e-29  Score=198.22  Aligned_cols=180  Identities=30%  Similarity=0.605  Sum_probs=149.7

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |++.+.++.+.+.||+|+||.||+|...+   .+..|++|.++      ..+.+|++++..++|+|++++++++..++..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (263)
T cd05052           1 WEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   77 (263)
T ss_pred             CCCchHHeEEeeecCCcccceEEEEEEec---CCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCc
Confidence            67888899999999999999999999876   68899999884      4578899999999999999999999988899


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +|++                         
T Consensus        78 ~lv~e~~-~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          78 YIITEFM-TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             EEEEEeC-CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            9999999 999999988642                               2222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++|||+++ |..||.+....+....+....       ....+.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  228 (263)
T cd05052         157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKGY-------RMERPE  228 (263)
T ss_pred             ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHCCC-------CCCCCC
Confidence                                1233456789999999999999985 468888877766655554322       234566


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++.++.+++.+||+.+|++||++.++++.|+.+
T Consensus       229 ~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         229 GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            7899999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0200|consensus

Probab=99.97  E-value=3.9e-29  Score=220.70  Aligned_cols=189  Identities=32%  Similarity=0.621  Sum_probs=162.9

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCC----ceeEEeecch--------HHHHHHHHHHhhC-CCCCc
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCR--------GDSLREIRFLSSL-QDPNL   86 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~----~~~vavK~~~--------~~~~~e~~~l~~l-~h~ni   86 (228)
                      .+....|+++++++.+.+.+|+|.||.|++|........    ...||||.++        +.+..|++++..+ .|+||
T Consensus       285 ~~~~~~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~ni  364 (609)
T KOG0200|consen  285 LPEDPKWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNI  364 (609)
T ss_pred             cCcCCceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcch
Confidence            344558999999999999999999999999998643322    5789999985        6689999999998 69999


Q ss_pred             ceeeeeeeCCCCCeEEEeeccccCCHHHHhhhCC----------------ccc---------------------------
Q psy796           87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD----------------NLT---------------------------  123 (228)
Q Consensus        87 v~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~r----------------~l~---------------------------  123 (228)
                      +.++|++....+.++++||+ ..|+|.+||+..|                .|.                           
T Consensus       365 v~llG~~t~~~~~~~v~Ey~-~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD  443 (609)
T KOG0200|consen  365 VNLLGACTQDGPLYVIVEYA-EHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD  443 (609)
T ss_pred             hhheeeeccCCceEEEEEec-cCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence            99999999988999999999 9999999997655                022                           


Q ss_pred             -------------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCC
Q psy796          124 -------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPF  154 (228)
Q Consensus       124 -------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~  154 (228)
                                                                       +....|+.|+|||||||++||+++++ ..||
T Consensus       444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG-~~PY  522 (609)
T KOG0200|consen  444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLG-GTPY  522 (609)
T ss_pred             hhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCC-CCCC
Confidence                                                             33457899999999999999999995 6999


Q ss_pred             CCCC-hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          155 PHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       155 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+.. ..++...+..+.       ++..|..|+.+++++|..||+.+|++||++.++.+.|+..
T Consensus       523 p~~~~~~~l~~~l~~G~-------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  523 PGIPPTEELLEFLKEGN-------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CCCCcHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            9876 667777676665       7788999999999999999999999999999999999885

>KOG0591|consensus

Probab=99.96  E-value=7.6e-31  Score=202.80  Aligned_cols=178  Identities=22%  Similarity=0.359  Sum_probs=148.4

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeee-eeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILG-VCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g-~~~~   95 (228)
                      ...+.++|.+.+.||.|+||.||++....   ++..||.|.++         .++..|+.+|++++|||||++++ -+..
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~---~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~   90 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLL---DGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE   90 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeecc---CcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc
Confidence            44566778999999999999999998876   88999999984         55789999999999999999998 4444


Q ss_pred             CCC-CeEEEeeccccCCHHHHhhhC-------------------------------------Cccc--------------
Q psy796           96 EQP-PWLVMEYPAQLGDLVQHLNSA-------------------------------------DNLT--------------  123 (228)
Q Consensus        96 ~~~-~~lv~e~~~~~g~L~~~l~~~-------------------------------------r~l~--------------  123 (228)
                      ++. +.|+|||| ..|+|...++..                                     |||+              
T Consensus        91 ~~evlnivmE~c-~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL  169 (375)
T KOG0591|consen   91 DNEVLNIVMELC-DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL  169 (375)
T ss_pred             cchhhHHHHHhh-cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence            444 78999999 999999877543                                     4555              


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    +....|+.||||||+||++|||+.+  .+||.+.+..++..++.++.   
T Consensus       170 GDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL--~~PF~g~n~~~L~~KI~qgd---  244 (375)
T KOG0591|consen  170 GDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCAL--QSPFYGDNLLSLCKKIEQGD---  244 (375)
T ss_pred             ccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhc--CCCcccccHHHHHHHHHcCC---
Confidence                                          6788999999999999999999995  59999998888888888763   


Q ss_pred             CccccCCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          174 ELQVFLPKP-SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       174 ~~~~~~~~~-~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                          ..+.| ...+.++..|+..|+..|++.||+...+++.++.
T Consensus       245 ----~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  245 ----YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             ----CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence                33345 6689999999999999999999996555554443

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.96  E-value=9.6e-29  Score=197.28  Aligned_cols=179  Identities=32%  Similarity=0.638  Sum_probs=146.7

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+|+.++|++.+.||+|+||.||+|...    .+..|++|.+.      +.+.+|+.+++.++|+||+++++++...+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   76 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI   76 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEec----CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            6788999999999999999999999865    56779999874      4678899999999999999999999888889


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +|++                         
T Consensus        77 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          77 YIITEYM-AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             EEEEecC-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence            9999999 999999988642                               1122                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++|||+++ |..||...........+....       ..+.+.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  227 (261)
T cd05072         156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTY-GKIPYPGMSNSDVMSALQRGY-------RMPRME  227 (261)
T ss_pred             CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHcc-CCCCCCCCCHHHHHHHHHcCC-------CCCCCC
Confidence                                1123456789999999999999985 368998777666655554322       233445


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++.++.+++.+||..+|++||+++++.+.|+.+
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         228 NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            6889999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=1.7e-28  Score=207.44  Aligned_cols=192  Identities=28%  Similarity=0.537  Sum_probs=151.6

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCC-CCC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQ-DPN   85 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~-h~n   85 (228)
                      .-.++....|+++++.+.+++.||+|+||.||+|......  .....||+|.++        ..+.+|++++..+. |||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~Hpn  102 (400)
T cd05105          23 PMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLN  102 (400)
T ss_pred             cccCCCCCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCC
Confidence            3467777899999999999999999999999999874311  134679999884        45788999999996 999


Q ss_pred             cceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------------
Q psy796           86 LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------------  119 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------------  119 (228)
                      |++++|++......+++|||| ++|+|.++|+..                                              
T Consensus       103 Iv~l~~~~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (400)
T cd05105         103 IVNLLGACTKSGPIYIITEYC-FYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMK  181 (400)
T ss_pred             eeeEEEEEccCCceEEEEEec-CCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccc
Confidence            999999999888999999999 999999887531                                              


Q ss_pred             -------------------------------------------------------------------------------C
Q psy796          120 -------------------------------------------------------------------------------D  120 (228)
Q Consensus       120 -------------------------------------------------------------------------------r  120 (228)
                                                                                                     +
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~  261 (400)
T cd05105         182 QADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHR  261 (400)
T ss_pred             cccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence                                                                                           1


Q ss_pred             ccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCC
Q psy796          121 NLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPF  154 (228)
Q Consensus       121 ~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~  154 (228)
                      |++                                              .....++.++||||||+++|||++. +..||
T Consensus       262 dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~-g~~P~  340 (400)
T cd05105         262 DLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSL-GGTPY  340 (400)
T ss_pred             CCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHC-CCCCC
Confidence            111                                              1123467889999999999999975 34777


Q ss_pred             CCCChHH-HHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          155 PHLTNEQ-VIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....... ....+....       .++.+..++.++.+++.+||+.+|++||++.+|.+.|+++
T Consensus       341 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         341 PGMIVDSTFYNKIKSGY-------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             cccchhHHHHHHHhcCC-------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            7654433 223232211       3345667889999999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0580|consensus

Probab=99.96  E-value=2.6e-29  Score=190.06  Aligned_cols=173  Identities=18%  Similarity=0.304  Sum_probs=152.6

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ...-++|++++.||.|.||.||+|+.++   +.-.||+|++-          ..+.+|+++-+.++||||++++|+|.++
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekk---s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~   94 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKK---SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS   94 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeecc---CCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence            3344679999999999999999999987   78899999882          4478899999999999999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      ..+||++||. +.|+++..|...                               ||++                      
T Consensus        95 ~riyLilEya-~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen   95 KRIYLILEYA-PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             ceeEEEEEec-CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence            9999999998 999999999833                               4444                      


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          ..+..++..+|+|++|++.+|++.  |.+||.+.+..++.+.+...        ..-.|+
T Consensus       174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflv--g~ppFes~~~~etYkrI~k~--------~~~~p~  243 (281)
T KOG0580|consen  174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLV--GLPPFESQSHSETYKRIRKV--------DLKFPS  243 (281)
T ss_pred             cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHh--cCCchhhhhhHHHHHHHHHc--------cccCCc
Confidence                                556678999999999999999999  67999999988888888765        455678


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++++|..|+..+|.+|.+..+++.+
T Consensus       244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  244 TISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            999999999999999999999999999875

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.96  E-value=1.4e-28  Score=195.84  Aligned_cols=173  Identities=28%  Similarity=0.581  Sum_probs=141.8

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +.++|++.+.||+|+||.||++.+.    .+..+|+|.++      .++.+|+.+++.++|+||+++++++...+..+++
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           2 NPSELTFMKELGSGQFGVVHLGKWR----AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             CHHHcEEeeEecCCcCceEEEEEec----cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence            4567899999999999999999885    45689999874      5688899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ ++|+|.++++..                              ++++                             
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          78 TEFM-ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             EEcC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence            9999 999999988642                              1111                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||+++ |..||...+..+....+....       ....|...+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~-g~~p~~~~~~~~~~~~i~~~~-------~~~~~~~~~~  228 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTE-GKMPFEKKSNYEVVEMISRGF-------RLYRPKLASM  228 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHCCC-------CCCCCCCCCH
Confidence                            1123457789999999999999995 368998887777766665432       2233555778


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ++.+++.+||+.+|.+||++.++++.|
T Consensus       229 ~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         229 TVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=3.2e-28  Score=194.91  Aligned_cols=181  Identities=31%  Similarity=0.607  Sum_probs=146.6

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      +..++|++.+.||+|+||.||+|.+.........|++|.++        .++.+|+.++.+++|+||+++++.+...+..
T Consensus         1 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (266)
T cd05033           1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV   80 (266)
T ss_pred             CChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence            35678999999999999999999986432245689999874        4578899999999999999999999888899


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      +++|||+ ++++|.+++...                              +|++                          
T Consensus        81 ~iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd05033          81 MIITEYM-ENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS  159 (266)
T ss_pred             EEEEEcC-CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence            9999999 999999988653                              1222                          


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||++. |..||......+....+....       ..+.+.
T Consensus       160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  231 (266)
T cd05033         160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSY-GERPYWDMSNQDVIKAVEDGY-------RLPPPM  231 (266)
T ss_pred             ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHcc-CCCCCCCCCHHHHHHHHHcCC-------CCCCCC
Confidence                                1123457789999999999999975 358888877777666554332       234456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++..+.+++.+||+.+|++||++.+|+++|+++
T Consensus       232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         232 DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            7889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=1.4e-28  Score=207.85  Aligned_cols=192  Identities=30%  Similarity=0.570  Sum_probs=151.3

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCC-CCC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQ-DPN   85 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~-h~n   85 (228)
                      ....+....|+++.+++.+.+.||+|+||.||+|.++..  ...+..||+|.++        ..+.+|+.++.++. |+|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~n  102 (401)
T cd05107          23 PMQLPYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLN  102 (401)
T ss_pred             CCCCCCCCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCC
Confidence            335666678999999999999999999999999997531  1245789999995        35778999999997 999


Q ss_pred             cceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------------
Q psy796           86 LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------------  119 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------------  119 (228)
                      |++++|++......+++|||+ ++|+|.+++++.                                              
T Consensus       103 iv~~~~~~~~~~~~~iv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (401)
T cd05107         103 IVNLLGACTKGGPIYIITEYC-RYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDM  181 (401)
T ss_pred             eEEEEEEEccCCCcEEEEecc-CCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcccccc
Confidence            999999999888999999999 999999988532                                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy796          120 --------------------------------------------------------------------------------  119 (228)
Q Consensus       120 --------------------------------------------------------------------------------  119 (228)
                                                                                                      
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv  261 (401)
T cd05107         182 SKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCV  261 (401)
T ss_pred             CCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcC
Confidence                                                                                            


Q ss_pred             -Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 -DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 -r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                       +|++                                              .....++.++||||||+++|||++++ ..
T Consensus       262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g-~~  340 (401)
T cd05107         262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLG-GT  340 (401)
T ss_pred             cccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcC-CC
Confidence             1111                                              11123467899999999999999853 47


Q ss_pred             CCCCCChHHHH-HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          153 PFPHLTNEQVI-QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       153 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ||......+.. ..+....       +++.|..++.++.+++.+||+.+|.+||++.+|+..|+.+
T Consensus       341 P~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         341 PYPELPMNEQFYNAIKRGY-------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             CCCCCCchHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            88765544432 2222211       3345667889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.2e-28  Score=194.39  Aligned_cols=178  Identities=34%  Similarity=0.664  Sum_probs=147.1

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++++++++.+.||+|++|.||+|...    .+..||+|.++      .++.+|+.++++++|+||+++++++...+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   76 (261)
T cd05068           1 WEIDRTSIQLLRKLGAGQFGEVWEGLWN----NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPI   76 (261)
T ss_pred             CccchhheeeEEEecccCCccEEEEEec----CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCe
Confidence            5788899999999999999999999875    45789999885      4688999999999999999999999888889


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +|++                         
T Consensus        77 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          77 YIVTELM-KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKE  155 (261)
T ss_pred             eeeeecc-cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence            9999999 999999998542                               1222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||+++ |..||.+.........+....       ..+.+.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  227 (261)
T cd05068         156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTY-GRMPYPGMTNAEVLQQVDQGY-------RMPCPP  227 (261)
T ss_pred             CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-------CCCCCC
Confidence                                1123457789999999999999996 368998877766665554321       234456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .++..+.+++.+||+.+|.+||++.++.+.|+.
T Consensus       228 ~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         228 GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            788999999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG1025|consensus

Probab=99.96  E-value=2.2e-29  Score=217.64  Aligned_cols=178  Identities=31%  Similarity=0.477  Sum_probs=154.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ...++...+||+|.||+||+|.|-...+ -+.+||+|++.        .++..|+..+.++.|+|+++++|++.... +.
T Consensus       695 Etelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q  773 (1177)
T KOG1025|consen  695 ETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ  773 (1177)
T ss_pred             hhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence            3345567899999999999999975322 35789999883        66899999999999999999999996654 89


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ||++|+ +.|+|.+|++.+                              |||+                           
T Consensus       774 lvtq~m-P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  774 LVTQLM-PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             HHHHhc-ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence            999999 999999999866                              2333                           


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         +....|+.++|||||||++||++|. |..||.+.+..++-..+..+.       +++.|+.
T Consensus       853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTF-Ga~Py~gi~~~eI~dlle~ge-------RLsqPpi  924 (1177)
T KOG1025|consen  853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTF-GAKPYDGIPAEEIPDLLEKGE-------RLSQPPI  924 (1177)
T ss_pred             ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhc-CCCccCCCCHHHhhHHHhccc-------cCCCCCC
Confidence                               5566899999999999999999998 579999999998888776654       6888999


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      |+.+++.++.+||..|+..||+|+++...+.+.
T Consensus       925 CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~  957 (1177)
T KOG1025|consen  925 CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM  957 (1177)
T ss_pred             ccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence            999999999999999999999999999999887

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=2.6e-28  Score=204.88  Aligned_cols=191  Identities=30%  Similarity=0.549  Sum_probs=149.7

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcc
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLV   87 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv   87 (228)
                      .++..+.|.++.++|++.+.||+|+||.||++.+...  ......||+|.++        ..+.+|+++++.+ +|+||+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv  105 (374)
T cd05106          26 QLPYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIV  105 (374)
T ss_pred             cccccccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCcee
Confidence            4666788999999999999999999999999986431  1144689999884        3478899999999 899999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------------------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------------------  119 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------------------  119 (228)
                      +++|++......+++|||+ ++|+|.+++...                                                
T Consensus       106 ~~~~~~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (374)
T cd05106         106 NLLGACTHGGPVLVITEYC-CYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEM  184 (374)
T ss_pred             eEeeEecCCCCeEEeHhhc-cCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccccc
Confidence            9999999988999999999 999999887421                                                


Q ss_pred             ---------------------------------------------------Cccc-------------------------
Q psy796          120 ---------------------------------------------------DNLT-------------------------  123 (228)
Q Consensus       120 ---------------------------------------------------r~l~-------------------------  123 (228)
                                                                         |||+                         
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         185 RPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             CCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence                                                               2222                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++. |..||...........+....      .....+
T Consensus       265 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~-G~~Pf~~~~~~~~~~~~~~~~------~~~~~~  337 (374)
T cd05106         265 DSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL-GKSPYPGILVNSKFYKMVKRG------YQMSRP  337 (374)
T ss_pred             CcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhC-CCCCCccccccHHHHHHHHcc------cCccCC
Confidence                                 1123567899999999999999974 358887755443322222111      023345


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...+.++.+++.+||+.+|++|||+.+|++.|+++
T Consensus       338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            56789999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=6.9e-28  Score=196.02  Aligned_cols=188  Identities=40%  Similarity=0.803  Sum_probs=145.4

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEec-------------cCCCceeEEeecch--------HHHHHHHHHHhhCCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETED-------------IELDTEKVAVRTCR--------GDSLREIRFLSSLQDPN   85 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~-------------~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~n   85 (228)
                      +++.++|++.+.||+|+||.||++....             .......||+|.++        .++.+|+.++..++|+|
T Consensus         1 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (296)
T cd05095           1 EFPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN   80 (296)
T ss_pred             CCChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            3577789999999999999999986532             11134578999884        35788999999999999


Q ss_pred             cceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------Cccc--
Q psy796           86 LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------DNLT--  123 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------r~l~--  123 (228)
                      |+++++++...+..+++|||+ ++|+|.+++...                                        +|++  
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~  159 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYM-ENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR  159 (296)
T ss_pred             cceEEEEEecCCccEEEEEeC-CCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence            999999999988999999999 999999887542                                        1221  


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  ...+.++.++||||||+++|||+++.+..||...+.
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05095         160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD  239 (296)
T ss_pred             eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence                                                        111345678999999999999999767789987776


Q ss_pred             HHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          160 EQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      .+..................+.+..++..+.+++.+||+.+|.+||++.+|.+.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         240 EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            66554443322221112234456678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=7.6e-28  Score=195.68  Aligned_cols=188  Identities=39%  Similarity=0.812  Sum_probs=145.4

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEecc-----------CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcc
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDI-----------ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~-----------~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv   87 (228)
                      +++..+|++.+.||+|+||.||++.....           ......||+|.++        ..+.+|++++.+++|+|++
T Consensus         1 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~   80 (295)
T cd05097           1 EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNII   80 (295)
T ss_pred             CCchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcC
Confidence            46777899999999999999999876431           1123468999884        3578899999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------------------Cccc---
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------DNLT---  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------r~l~---  123 (228)
                      ++++++...+..+++|||+ ++++|.+++...                                         +|++   
T Consensus        81 ~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          81 RLLGVCVSDDPLCMITEYM-ENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             eEEEEEcCCCccEEEEecC-CCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            9999999888999999999 999998887431                                         1121   


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 .....++.++||||||++++||+++++..||...+..
T Consensus       160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~  239 (295)
T cd05097         160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE  239 (295)
T ss_pred             EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence                                                       1123457899999999999999997778899887777


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +....+...............+..++..+.+|+.+||+.+|++|||+.+|++.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            6655543322211111123345567899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=4.5e-28  Score=195.58  Aligned_cols=180  Identities=36%  Similarity=0.669  Sum_probs=145.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ++-++|++.+.||+|+||.||+|......  .....|++|.++        ..+.+|++++..++|+||+++++++....
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ   81 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence            44567889999999999999999876422  134689999884        44788999999999999999999998888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---------  123 (228)
                      ..+++|||+ ++|+|.+++...                                             +||+         
T Consensus        82 ~~~~~~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~  160 (283)
T cd05048          82 PTCMLFEYL-AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG  160 (283)
T ss_pred             ceEEEEecC-CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence            899999999 999999988542                                             1221         


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .....++.++|||||||++|||++. +..||.+.+..+....+
T Consensus       161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~-g~~p~~~~~~~~~~~~i  239 (283)
T cd05048         161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSY-GLQPYYGFSNQEVIEMI  239 (283)
T ss_pred             CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Confidence                                                 1224567889999999999999984 36889888877766655


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ....       ..+.+..++.++.+|+.+||+.+|.+||++.+|+++|+.
T Consensus       240 ~~~~-------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         240 RSRQ-------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HcCC-------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            4321       233466789999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=7.1e-28  Score=192.05  Aligned_cols=175  Identities=27%  Similarity=0.568  Sum_probs=141.2

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++.+++++.+.||+|+||.||.+.+.    .+..+|+|.++      ..+.+|+.++.+++|+||+++++++...+..++
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           1 IDPKDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             CChHHeEEeeEecCcccceEEEEEec----CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence            35667899999999999999999875    45569999885      457899999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ ++|+|.+++...                              ++++                            
T Consensus        77 v~e~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05113          77 VTEYM-SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY  155 (256)
T ss_pred             EEEcC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence            99999 999999988643                              1111                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++||||||+++|||+++ +..||...+..+....+....       ....+...+
T Consensus       156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~  227 (256)
T cd05113         156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSL-GKMPYERFNNSETVEKVSQGL-------RLYRPHLAS  227 (256)
T ss_pred             eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcC-CCCCcCcCCHHHHHHHHhcCC-------CCCCCCCCC
Confidence                             1123467889999999999999985 368888777766666554322       223355578


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ..+.+++.+||+.+|.+||++.+++..|+
T Consensus       228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            99999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=1.1e-27  Score=191.25  Aligned_cols=177  Identities=34%  Similarity=0.677  Sum_probs=144.5

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+|.++++++.+.||+|+||.||+|...    .+..||+|.+.      .++.+|+.++++++|+|++++++++. .+..
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~----~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~   75 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI   75 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeecC----CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence            6788999999999999999999999865    56789999884      56889999999999999999999874 4568


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +|++                         
T Consensus        76 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          76 YIITEYM-ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIED  154 (260)
T ss_pred             EEEEEcC-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence            9999999 999999987542                               1222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||+++ |..||.+.+..+....+....       ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  226 (260)
T cd05067         155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTY-GRIPYPGMTNPEVIQNLERGY-------RMPRPD  226 (260)
T ss_pred             CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHHcCC-------CCCCCC
Confidence                                1123456789999999999999985 468998877766665553321       234566


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .++.++.+++.+||..+|++||+++++...|+.
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         227 NCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=2.1e-27  Score=192.50  Aligned_cols=191  Identities=32%  Similarity=0.541  Sum_probs=150.6

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      |++..++|++.+.||+|+||.||+|.....  ...+..||+|.++        ..+.+|+.+++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   80 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK   80 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            678889999999999999999999987531  1135689999873        346789999999999999999999988


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC---------------------------------------Cccc-------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------DNLT-------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------r~l~-------------  123 (228)
                      .+..+++|||+ ++|+|.+++...                                       ++++             
T Consensus        81 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          81 GQPTLVVMELM-AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CCCcEEEEeCC-CCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence            88899999999 999999998631                                       1111             


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                       .....++.++||||||++++||+++ +..||.+....+....+....
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~  238 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL-AEQPYQGLSNEQVLKFVMDGG  238 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC
Confidence                                             1123567889999999999999986 358898877766655443221


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccCCCCC
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYKSNLD  225 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~~~~~  225 (228)
                             ....+..++.++.+++.+||+.+|++|||+.++++.|+.. ....+-.|
T Consensus       239 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         239 -------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             -------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence                   2234556789999999999999999999999999999987 44444444

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0592|consensus

Probab=99.96  E-value=4.4e-28  Score=201.58  Aligned_cols=171  Identities=20%  Similarity=0.322  Sum_probs=152.3

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH----------HHHHHHHHhhC-CCCCcceeeeeeeCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------SLREIRFLSSL-QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------~~~e~~~l~~l-~h~niv~~~g~~~~~~   97 (228)
                      ...+|.+++.||+|+|++|++|+...   .++.+|||++.++          +.+|-..|.++ .||.|++++-.|+++.
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~---t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~  147 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKA---TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE  147 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecC---CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence            45689999999999999999999887   8899999999533          45788888888 8999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      .+|+|+||+ ++|+|.++|++-                             |||+                         
T Consensus       148 sLYFvLe~A-~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  148 SLYFVLEYA-PNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             ceEEEEEec-CCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            999999999 999999988765                             5555                         


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      +..+..++.+|+|+|||++|+|+.  |.+||.+.+..-+++.++..  
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmla--G~PPFra~NeyliFqkI~~l--  302 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLA--GQPPFRAANEYLIFQKIQAL--  302 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhc--CCCCCccccHHHHHHHHHHh--
Confidence                                            555667899999999999999999  78999999999999999876  


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ...+|...++.+++|+.+.|..||.+|+|+.+|.+|
T Consensus       303 ------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  303 ------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence                  466899999999999999999999999999888764

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.96  E-value=1.7e-27  Score=194.47  Aligned_cols=196  Identities=29%  Similarity=0.560  Sum_probs=156.2

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEecc----CCCceeEEeecch--------HHHHHHHHHHhhC-CCCC
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI----ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPN   85 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~----~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~n   85 (228)
                      .+++...|++...++.+.+.||+|+||.||++.....    ...+..|++|.++        .++.+|+.++..+ +|+|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~   82 (304)
T cd05101           3 ELPEDPRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN   82 (304)
T ss_pred             ccccCCcccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCC
Confidence            4555667889999999999999999999999986421    1134679999884        3477899999999 8999


Q ss_pred             cceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------C
Q psy796           86 LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------D  120 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r  120 (228)
                      |+++++++......+++|||+ ++|+|.+++...                                             +
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~  161 (304)
T cd05101          83 IINLLGACTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHR  161 (304)
T ss_pred             chheeEEEecCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            999999999888899999999 999999988642                                             2


Q ss_pred             ccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCC
Q psy796          121 NLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPF  154 (228)
Q Consensus       121 ~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~  154 (228)
                      ||+                                              .....++.++||||||+++|||++++ ..||
T Consensus       162 dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g-~~p~  240 (304)
T cd05101         162 DLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPY  240 (304)
T ss_pred             ccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCC-CCCc
Confidence            222                                              12234678899999999999999863 5788


Q ss_pred             CCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCCC
Q psy796          155 PHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN  223 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~~  223 (228)
                      .+.+..+....+....       ....+..++.++.+++.+||+.+|.+|||+.++++.|+++.....|
T Consensus       241 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~~  302 (304)
T cd05101         241 PGIPVEELFKLLKEGH-------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN  302 (304)
T ss_pred             ccCCHHHHHHHHHcCC-------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhhc
Confidence            8877777666554321       2344667899999999999999999999999999999999655443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.5e-27  Score=191.89  Aligned_cols=181  Identities=31%  Similarity=0.547  Sum_probs=147.7

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      |+++.+++.+.+.||+|+||.||+|......  .....|++|.+.        ..+.+|+.++..++|+|++++++++..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (277)
T cd05032           1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST   80 (277)
T ss_pred             CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence            6788999999999999999999999886422  245789999984        347789999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC---------------------------------------Cccc-------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------DNLT-------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------r~l~-------------  123 (228)
                      ....+++|||+ ++|+|.+++...                                       +|++             
T Consensus        81 ~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          81 GQPTLVVMELM-AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CCCcEEEEecC-CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence            88999999999 999999987531                                       1221             


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                       .....++.++||||||+++|||+++ +..||.+.+..+....+....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~-g~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05032         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATL-AEQPYQGLSNEEVLKFVIDGG  238 (277)
T ss_pred             ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhcc-CCCCCccCCHHHHHHHHhcCC
Confidence                                             1224567889999999999999985 458898877777666554221


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                             ....|..++.++.+++.+||+.+|++|||+.+++..|+
T Consensus       239 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         239 -------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             -------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence                   33456678999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.96  E-value=7.3e-28  Score=198.89  Aligned_cols=174  Identities=20%  Similarity=0.262  Sum_probs=143.7

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .....++|++.+.||+|+||.||++....   .++.||+|.++          ..+.+|+.++.+++|+||+++++++..
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   89 (329)
T PTZ00263         13 SSWKLSDFEMGETLGTGSFGRVRIAKHKG---TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD   89 (329)
T ss_pred             CCCCchheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence            33445779999999999999999999875   67899999884          236789999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      ++..+++|||+ ++|+|.+++...                             +||+                       
T Consensus        90 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         90 ENRVYFLLEFV-VGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             CCEEEEEEcCC-CCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence            99999999999 999999887654                             3333                       


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..+
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~pf~~~~~~~~~~~i~~~--------~~~~p~~~  238 (329)
T PTZ00263        169 PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA--GYPPFFDDTPFRIYEKILAG--------RLKFPNWF  238 (329)
T ss_pred             CCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc--CCCCCCCCCHHHHHHHHhcC--------CcCCCCCC
Confidence                              233456889999999999999999  67999887776666655433        34456678


Q ss_pred             cHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      +.++++++.+||+.||.+|++     +.+++.|
T Consensus       239 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            899999999999999999986     6888764

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=2.4e-27  Score=189.91  Aligned_cols=181  Identities=27%  Similarity=0.555  Sum_probs=144.3

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |..++|+..+.||+|+||.||+|...........+++|.++        ..+.+|++++..++|+|++++++++......
T Consensus         2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence            55678899999999999999999986532234579999874        3477899999999999999999999988899


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      +++|||+ ++++|.+++...                              +|++                          
T Consensus        82 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          82 MIITEYM-ENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence            9999999 999999988643                              1111                          


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++. |..||...+..+....+....       ..+.+
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~-g~~p~~~~~~~~~~~~i~~~~-------~~~~~  232 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSF-GERPYWDMSNHEVMKAINDGF-------RLPAP  232 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhC-CCCCCCcCCHHHHHHHHhcCC-------CCCCC
Confidence                                 1123456789999999999999874 357887777666655554321       33445


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus       233 ~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         233 MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            56789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0598|consensus

Probab=99.96  E-value=7.5e-28  Score=192.25  Aligned_cols=167  Identities=20%  Similarity=0.324  Sum_probs=147.0

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+..++|++.++||+|+||+|++++.++   .++.+|+|.++          ....+|..+|..++||.||+++-.|++
T Consensus        20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~d---t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt   96 (357)
T KOG0598|consen   20 EMVGPDDFEILKVIGKGSFGKVFQVRKKD---TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT   96 (357)
T ss_pred             ccCChhheeeeeeeeccCCceEEEEEEcc---cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc
Confidence            35677899999999999999999999885   88999999995          346789999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      .+.+|+|+||+ .||.|..+|.+.                             |||+                       
T Consensus        97 ~~kLylVld~~-~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~  175 (357)
T KOG0598|consen   97 EEKLYLVLDYL-NGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED  175 (357)
T ss_pred             CCeEEEEEecc-CCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence            99999999999 999999999865                             5555                       


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           +....|+.++|.||+|+++|||++  |.+||.+.+.......+....       ....|
T Consensus       176 ~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~--G~pPF~~~~~~~~~~~I~~~k-------~~~~p  246 (357)
T KOG0598|consen  176 LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLT--GKPPFYAEDVKKMYDKILKGK-------LPLPP  246 (357)
T ss_pred             ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhh--CCCCCcCccHHHHHHHHhcCc-------CCCCC
Confidence                                 556689999999999999999999  679999999888888887652       23445


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCC
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rp  205 (228)
                      ..++.+.++++...++.+|+.|.
T Consensus       247 ~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  247 GYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             ccCCHHHHHHHHHHhccCHHHhc
Confidence            66999999999999999999995

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=2.3e-27  Score=192.68  Aligned_cols=187  Identities=45%  Similarity=0.900  Sum_probs=148.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-------------CceeEEeecch--------HHHHHHHHHHhhCCCCCc
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-------------DTEKVAVRTCR--------GDSLREIRFLSSLQDPNL   86 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-------------~~~~vavK~~~--------~~~~~e~~~l~~l~h~ni   86 (228)
                      ++++++++.+.||+|+||.||++.......             ....||+|.+.        ..+.+|++++.+++|+|+
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   81 (296)
T cd05051           2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI   81 (296)
T ss_pred             CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE
Confidence            566789999999999999999988753211             23568999884        457789999999999999


Q ss_pred             ceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------Cccc---
Q psy796           87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------DNLT---  123 (228)
Q Consensus        87 v~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------r~l~---  123 (228)
                      +++++++..+...+++|||+ ++++|.+++...                                        +|++   
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYM-ENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             eEEEEEEecCCCcEEEEecC-CCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            99999999888999999999 999999887542                                        1121   


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 .....++.++||||||+++|||+++++..||...+..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence                                                       1223567889999999999999997677899887777


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +....+.............+.+..++.++.+++.+||+.+|.+|||+.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            7666665543333333234456678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.96  E-value=2.7e-27  Score=193.52  Aligned_cols=197  Identities=31%  Similarity=0.589  Sum_probs=155.4

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC----CCceeEEeecch--------HHHHHHHHHHhhC-CC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE----LDTEKVAVRTCR--------GDSLREIRFLSSL-QD   83 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~----~~~~~vavK~~~--------~~~~~e~~~l~~l-~h   83 (228)
                      .+.+++.+.|+++.+++.+.+.||+|+||.||++......    .....+|+|.++        .++.+|+.++..+ +|
T Consensus         4 ~~~~~~~~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h   83 (307)
T cd05098           4 EYELPEDPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH   83 (307)
T ss_pred             cccCCCCCcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC
Confidence            3445566789999999999999999999999999874321    123579999884        2467899999999 79


Q ss_pred             CCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC--------------------------------------------
Q psy796           84 PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA--------------------------------------------  119 (228)
Q Consensus        84 ~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------------------  119 (228)
                      +||+++++++...+..+++|||+ ++|+|.+++...                                            
T Consensus        84 ~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~  162 (307)
T cd05098          84 KNIINLLGACTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCI  162 (307)
T ss_pred             CCEeeEEEEEecCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            99999999999888999999999 999999988642                                            


Q ss_pred             -Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 -DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 -r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                       +|++                                              ..+..++.++||||||+++|||+++ +..
T Consensus       163 H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~-g~~  241 (307)
T cd05098         163 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL-GGS  241 (307)
T ss_pred             cccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcC-CCC
Confidence             1111                                              1123457789999999999999986 358


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                      ||.+.+..+....+....       ....+..++.++.+++.+||+.+|.+|||+.+|++.|+++.....
T Consensus       242 p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         242 PYPGVPVEELFKLLKEGH-------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             CCCcCCHHHHHHHHHcCC-------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence            888777666555544321       234566788999999999999999999999999999999954433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=6.7e-28  Score=192.31  Aligned_cols=179  Identities=27%  Similarity=0.587  Sum_probs=146.8

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      |+-+..+|++.+.||+|+||.||+|...    .+..+++|.+.       ..+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~~~~~~y~~~~~ig~g~~~~vy~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   76 (261)
T cd05148           1 WERPREEFTLERKLGSGYFGEVWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP   76 (261)
T ss_pred             CcCcHHHHHHhhhhccCCCccEEEeEec----CCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC
Confidence            3455667889999999999999999986    56889999884       457889999999999999999999999889


Q ss_pred             CeEEEeeccccCCHHHHhhhC-------------------------------Cccc------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~------------------------  123 (228)
                      .+++|||+ ++++|.+++...                               +|++                        
T Consensus        77 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148          77 VYIITELM-EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             eEEEEeec-ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence            99999999 999999998642                               1222                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++++|+++ +..||...+..+....+....       ..+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  227 (261)
T cd05148         156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY-GQVPYPGMNNHEVYDQITAGY-------RMPCPA  227 (261)
T ss_pred             CccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcC-CCCCCCcCCHHHHHHHHHhCC-------cCCCCC
Confidence                                1224567789999999999999985 468998877766666554321       334566


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+++++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            7889999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=3e-27  Score=191.53  Aligned_cols=182  Identities=34%  Similarity=0.647  Sum_probs=146.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      |.+.++.+.+.||+|+||.||++.....  ......+++|.+.       ..+.+|++++.+++|+|++++++++...+.
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            5678899999999999999999976432  1145678999884       457889999999999999999999998889


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------------------Cccc-------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------------------DNLT-------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------------------r~l~-------------  123 (228)
                      .+++|||+ ++++|.+++...                                          ++++             
T Consensus        82 ~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          82 LIMVFEYM-KHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             cEEEEEcC-CCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            99999999 999999888532                                          2222             


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                       .....++.++||||||++++||+++ +..||...+.......+....
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~-g~~p~~~~~~~~~~~~i~~~~  239 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY-GKQPWYQLSNNEVIECITQGR  239 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC
Confidence                                             1223567889999999999999985 468888877766655554322


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                             ....+..++.++.+++.+||+.+|.+|||+.++...|+.+.
T Consensus       240 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         240 -------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             -------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence                   22335567889999999999999999999999999999994

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.8e-27  Score=188.70  Aligned_cols=178  Identities=37%  Similarity=0.726  Sum_probs=146.9

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++.++|.+.+.||+|+||.||++...    .+..|++|.+.      .++.+|+.++++++|+|++++++++......
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~----~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   76 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWN----GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI   76 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEc----CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence            6789999999999999999999999865    45779999884      5688999999999999999999999888889


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               ++++                         
T Consensus        77 ~~v~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034          77 YIVTEYM-SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIED  155 (261)
T ss_pred             EEEEecc-CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccc
Confidence            9999999 999999988643                               1111                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          ..+..++.++||||||++++||+++ |..||.+.........+....       ..+.+.
T Consensus       156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  227 (261)
T cd05034         156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTY-GRVPYPGMTNREVLEQVERGY-------RMPRPP  227 (261)
T ss_pred             hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCCCCC
Confidence                                1124467889999999999999985 468998877766665554321       234455


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .++.++.+++.+||+.+|++||++.++.+.|+.
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         228 NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=3.2e-27  Score=191.63  Aligned_cols=187  Identities=33%  Similarity=0.635  Sum_probs=151.3

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSIL   90 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~   90 (228)
                      ....+.+++++|++.+.||+|+||.||++......  .....+++|.++        ..+.+|++++.++ +|+||++++
T Consensus         3 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~   82 (293)
T cd05053           3 LDPEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL   82 (293)
T ss_pred             CCcccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            34678899999999999999999999999886432  245789999874        3477899999999 799999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc--
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT--  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~--  123 (228)
                      +++......+++|||+ ++|+|.+++...                                             +||+  
T Consensus        83 ~~~~~~~~~~li~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~  161 (293)
T cd05053          83 GVCTQEGPLYVVVEYA-AHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR  161 (293)
T ss_pred             EEEcCCCCeEEEEEeC-CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence            9998888999999999 999999988531                                             1111  


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  .....++.++||||||+++|||++. |..||.+.+.
T Consensus       162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~  240 (293)
T cd05053         162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL-GGSPYPGIPV  240 (293)
T ss_pred             eEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcC-CCCCCCCCCH
Confidence                                                        1223467789999999999999985 4588888777


Q ss_pred             HHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          160 EQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+....+....       ....+..++.++.+++.+||..+|.+|||+.++++.|+.+
T Consensus       241 ~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         241 EELFKLLKEGY-------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHcCC-------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            76665554321       3345667889999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=3.2e-27  Score=189.25  Aligned_cols=180  Identities=30%  Similarity=0.613  Sum_probs=144.1

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ..++|++.+.||+|+||.||+|...........+++|.++        ..+.+|+.++.+++|+||+++++++..++..+
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            4567889999999999999999875432234579999874        45788999999999999999999998888999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++++|.+++...                              +|++                           
T Consensus        82 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          82 IVTEYM-ENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            999999 999999998653                              1111                           


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++|+||||++++|+++. |..||.+.+..+....+....       ..+.+.
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  232 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY-GERPYWEMSNQDVIKAIEEGY-------RLPAPM  232 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcC-CCCCcccCCHHHHHHHHhCCC-------cCCCCC
Confidence                                1123567789999999999998864 468898877766655554321       234456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         233 DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            6889999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=3.4e-27  Score=190.64  Aligned_cols=180  Identities=32%  Similarity=0.642  Sum_probs=143.9

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccC-CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIE-LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~-~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++.+++++.+.||+|+||.||+|...... ..+..|++|.++        ..+.+|+.+++.++|+||+++++++.....
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   81 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP   81 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence            56678999999999999999999864321 145789999985        457889999999999999999999999889


Q ss_pred             CeEEEeeccccCCHHHHhhhC----------------------------------------------Cccc---------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA----------------------------------------------DNLT---------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~----------------------------------------------r~l~---------  123 (228)
                      .+++|||+ ++++|.+++...                                              +|++         
T Consensus        82 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~  160 (283)
T cd05090          82 VCMLFEYL-NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             eEEEEEcC-CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence            99999999 999999887411                                              1222         


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .....++.++||||||++++||+++ +..||.+.+.......+
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~-g~~p~~~~~~~~~~~~~  239 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSF-GLQPYYGFSNQEVIEMV  239 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Confidence                                                 1123467899999999999999985 45788877766555544


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ....       .++.+..++.++.+++.+||+.+|++||++.+|.++|..
T Consensus       240 ~~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         240 RKRQ-------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HcCC-------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            3321       334566789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=2.8e-27  Score=190.57  Aligned_cols=181  Identities=31%  Similarity=0.537  Sum_probs=144.9

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      |++..++|++.+.||+|+||.||.|.+....  ..+..||+|.++        ..+.+|+.+++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~   80 (277)
T cd05062           1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   80 (277)
T ss_pred             CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            5677888999999999999999999875321  145789999873        347789999999999999999999988


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC---------------------------------------Cccc-------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------DNLT-------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------r~l~-------------  123 (228)
                      .+..+++|||+ ++|+|.+++...                                       +||+             
T Consensus        81 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~  159 (277)
T cd05062          81 GQPTLVIMELM-TRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  159 (277)
T ss_pred             CCCeEEEEecC-CCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence            88999999999 999999988642                                       1111             


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                       .....++.++||||||+++|||+++ +..||.+.+.......+....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05062         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-AEQPYQGMSNEQVLRFVMEGG  238 (277)
T ss_pred             ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCC
Confidence                                             1123467889999999999999996 357888877766655544321


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                             ....+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       239 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         239 -------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             -------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence                   22345678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=3.5e-27  Score=193.65  Aligned_cols=182  Identities=25%  Similarity=0.476  Sum_probs=143.3

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .+...+|+..+.||+|+||.||+|.+..... ....||+|.++        .++.+|+.+++.++|+||++++|++... 
T Consensus         3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-   81 (316)
T cd05108           3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-   81 (316)
T ss_pred             ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence            3566789999999999999999998754111 23458999873        4578899999999999999999999765 


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..++++||+ ++|+|.+++...                              +||+                        
T Consensus        82 ~~~~v~e~~-~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          82 TVQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             CceeeeecC-CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence            568999999 999999988653                              2333                        


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||++. +..||.+....+....+....       ..+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~  232 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGE-------RLPQ  232 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHhCCC-------CCCC
Confidence                                  2233567889999999999999874 468888777665544333221       3445


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +..++.++.+++.+||+.+|.+||++.+++..|..+.
T Consensus       233 ~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         233 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            6678899999999999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=194.51  Aligned_cols=169  Identities=16%  Similarity=0.204  Sum_probs=140.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .++.||+|.+.          ..+.+|+.+++.++|+||+++++++.+.+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   77 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRI---SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLY   77 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEE
Confidence            367889999999999999998865   67899999883          23678999999999999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++|+|.+++...                             +||+                            
T Consensus        78 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~  156 (291)
T cd05612          78 MLMEYV-PGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW  156 (291)
T ss_pred             EEEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcc
Confidence            999999 999999988654                             2222                            


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.+++
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~--g~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~  226 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV--GYPPFFDDNPFGIYEKILAG--------KLEFPRHLDLYAK  226 (291)
T ss_pred             cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CcCCCccCCHHHH
Confidence                         223456788999999999999999  67899888777766666543        3445667789999


Q ss_pred             HHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      +++.+||+.||.+||+     +++++++
T Consensus       227 ~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         227 DLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            9999999999999995     8888864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0616|consensus

Probab=99.95  E-value=1.1e-27  Score=186.45  Aligned_cols=163  Identities=22%  Similarity=0.330  Sum_probs=147.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ..-++|+..++||.|+||+|++.+.+.   ++..+|+|+++          +...+|..+|+.+.||.++++++.+.+.+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~---~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKH---SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS  117 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEcc---CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC
Confidence            556779999999999999999999987   78999999994          34568999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ++++||||+ +||.|+.+|++.                             |||+                         
T Consensus       118 ~lymvmeyv-~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  118 NLYMVMEYV-PGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             eEEEEEecc-CCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            999999999 999999999874                             5555                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++|-|||||++|||+.  |.+||.+.+...+.+.+..+        ...+|+..+.
T Consensus       197 rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMla--G~pPF~~~~~~~iY~KI~~~--------~v~fP~~fs~  266 (355)
T KOG0616|consen  197 RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLA--GYPPFYDDNPIQIYEKILEG--------KVKFPSYFSS  266 (355)
T ss_pred             cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHc--CCCCCcCCChHHHHHHHHhC--------cccCCcccCH
Confidence                            667789999999999999999999  77999999999999999876        5678999999


Q ss_pred             HHHHHHHHhhccCCCCC
Q psy796          188 DIYDLMCDCWKRDQTMR  204 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~R  204 (228)
                      ++++|+...++.|-..|
T Consensus       267 ~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  267 DAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHHHHHhhhhHhh
Confidence            99999999999998888

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=4.5e-27  Score=188.49  Aligned_cols=180  Identities=29%  Similarity=0.596  Sum_probs=143.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ...++++.+.||+|+||.||+|...........|++|.++        ..+.+|+.+++.++|+||+++++++......+
T Consensus         2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence            3456889999999999999999987532234579999874        45788999999999999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++++|.+++...                              +|++                           
T Consensus        82 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          82 IITEFM-ENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EEEecC-CCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence            999999 999999988643                              1222                           


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||++. |..||.+.+..+....+....       ..+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~-g~~p~~~~~~~~~~~~i~~~~-------~~~~  232 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY-GERPYWDMSNQDVINAIEQDY-------RLPP  232 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcC-CCCCCCCCCHHHHHHHHHcCC-------cCCC
Confidence                                  1123446789999999999998864 468898877776666553321       3344


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +..++.++.+++.+||+.+|.+||++.+|+..|+++
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         233 PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            567889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG1989|consensus

Probab=99.95  E-value=7.5e-28  Score=209.86  Aligned_cols=194  Identities=19%  Similarity=0.234  Sum_probs=157.3

Q ss_pred             cccCCCCCccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhh
Q psy796            8 WNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSS   80 (228)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~   80 (228)
                      +...++++............+...++++.++|.+|+|+.||++....   .+..+|+|.+-       ..+.+||++++.
T Consensus        14 ~~~~~~~~~~~~~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~---~~~~~AlKrm~~~de~~L~~v~~EI~~MK~   90 (738)
T KOG1989|consen   14 GSSKGSSPQSENYFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVK---GGKKYALKRMYVNDEEALNAVKREIDIMKL   90 (738)
T ss_pred             CCCCCCCcccccCCCceEEEECCEEEEEEEEEccCCcEEEEEEEecC---CCceeeeeeeecCCHHHHHHHHHHHHHHHH
Confidence            34445555566666678999999999999999999999999999975   44899999882       557899999999


Q ss_pred             CC-CCCcceeeeee-eCC---C---CCeEEEeeccccCCHHHHhhhC---------------------------------
Q psy796           81 LQ-DPNLVSILGVC-TGE---Q---PPWLVMEYPAQLGDLVQHLNSA---------------------------------  119 (228)
Q Consensus        81 l~-h~niv~~~g~~-~~~---~---~~~lv~e~~~~~g~L~~~l~~~---------------------------------  119 (228)
                      |. |+|||.+++.+ ...   +   .+.|+|||| .+|.|-|++...                                 
T Consensus        91 L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC-~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIH  169 (738)
T KOG1989|consen   91 LSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYC-KGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIH  169 (738)
T ss_pred             hcCCCceeeEeccccccccCCCceeEEEeehhhc-cCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccch
Confidence            96 99999999933 211   1   357999999 999999999754                                 


Q ss_pred             Cccc--------------------------------------------------------cccCCCCCccchHHHHHHHH
Q psy796          120 DNLT--------------------------------------------------------RDRDRYTCQSNVWSFAVTLW  143 (228)
Q Consensus       120 r~l~--------------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~  143 (228)
                      ||||                                                        +.+...+.|+|||+|||+||
T Consensus       170 RDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLY  249 (738)
T KOG1989|consen  170 RDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLY  249 (738)
T ss_pred             hhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHH
Confidence            6666                                                        66778999999999999999


Q ss_pred             HHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          144 EILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       144 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      -|+.  ...||.+.....+    ..+.+      .+|..+..+..+++||..||+.+|++||++-+|+..+.++
T Consensus       250 kLCy--~t~PFe~sg~laI----lng~Y------~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  250 KLCY--FTTPFEESGKLAI----LNGNY------SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             HHHH--hCCCcCcCcceeE----Eeccc------cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence            9999  5699987533322    12211      3444467899999999999999999999999999999998

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.5e-27  Score=188.78  Aligned_cols=173  Identities=32%  Similarity=0.647  Sum_probs=140.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +..++++.+.||+|+||.||++.+.    .+..+++|.+.      ..+.+|+.++++++|+||+++++++...+..+++
T Consensus         2 ~~~~~~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           2 DPSELTFLKELGSGQFGVVHLGKWR----GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             ChHHcchhhhhccCCCceEEEeEec----CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence            4567889999999999999999875    45679999874      4678899999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ ++++|.+++...                              +|++                             
T Consensus        78 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          78 TEYM-ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             EecC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence            9999 999999988643                              2222                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||+++ +..||...+..+....+....       ....+..++.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  228 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSE-GKMPYERFSNSEVVESVSAGY-------RLYRPKLAPT  228 (256)
T ss_pred             ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhcc-CCCCCCCCCHHHHHHHHHcCC-------cCCCCCCCCH
Confidence                            1124556789999999999999985 368888777666655544321       2334566899


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ++.+++.+||+.+|++|||+.++++.|
T Consensus       229 ~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         229 EVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=2e-27  Score=191.39  Aligned_cols=179  Identities=37%  Similarity=0.674  Sum_probs=144.2

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +..++|.+.+.||+|+||.||+|.....  ...+..||+|.++        ..+.+|++++..+.|+|++++++++....
T Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   81 (280)
T cd05049           2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD   81 (280)
T ss_pred             CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence            4566788899999999999999987532  1245789999984        45789999999999999999999999998


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------------------Cccc-----------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------------------DNLT-----------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------------------r~l~-----------  123 (228)
                      ..+++|||+ ++++|.+++...                                           +||+           
T Consensus        82 ~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          82 PPIMVFEYM-EHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             CeEEEEecC-CCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence            999999999 999999988532                                           1111           


Q ss_pred             -----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q psy796          124 -----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH  168 (228)
Q Consensus       124 -----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~  168 (228)
                                                         .....++.++||||||+++|||++. |..||...+.......+..
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~-g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTY-GKQPWYGLSNEEVIECITQ  239 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHc
Confidence                                               1234567889999999999999984 3588888777766665543


Q ss_pred             hhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          169 MYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +.       ....+..++.++.+++.+||+.+|.+||++.+|++.|+
T Consensus       240 ~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         240 GR-------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             CC-------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            21       22335568899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.95  E-value=4e-27  Score=187.89  Aligned_cols=177  Identities=33%  Similarity=0.650  Sum_probs=143.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++.+++++.+.||+|+||.||++...    .+..|++|.++      ..+.+|+.++++++|+|++++++++. .+..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~   75 (260)
T cd05070           1 WEIPRESLQLIKKLGNGQFGEVWMGTWN----GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI   75 (260)
T ss_pred             CCCchHHhhhhheeccccCceEEEEEec----CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence            6788889999999999999999999775    55679999884      56889999999999999999999875 4568


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               ++++                         
T Consensus        76 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          76 YIVTEYM-SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIED  154 (260)
T ss_pred             EEEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence            9999999 999999988542                               1122                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||+++ +..||.+.+..+....+....       ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  226 (260)
T cd05070         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK-GRVPYPGMNNREVLEQVERGY-------RMPCPQ  226 (260)
T ss_pred             cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-------CCCCCC
Confidence                                1123456789999999999999995 468898877766665554321       234456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ..+.++.+++.+||..+|.+|||+.++...|+.
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=6.1e-27  Score=187.29  Aligned_cols=178  Identities=33%  Similarity=0.648  Sum_probs=142.6

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++..+|++.+.||+|+||.||+|...    .+..|++|.++      ..+.+|++++..++|+||+++++.+. ....
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~   75 (262)
T cd05071           1 WEIPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPI   75 (262)
T ss_pred             CCCChHHeeEeeecCCCCCCcEEEEEec----CCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCc
Confidence            5788889999999999999999999875    34569999885      45789999999999999999999874 4567


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++|+|.+++...                               +|++                         
T Consensus        76 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          76 YIVTEYM-SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  154 (262)
T ss_pred             EEEEEcC-CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence            9999999 999999998642                               2222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++|||+++ +..||.+.........+....       ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  226 (262)
T cd05071         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVERGY-------RMPCPP  226 (262)
T ss_pred             cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCChHHHHHHHhcCC-------CCCCcc
Confidence                                1123457789999999999999996 367888777666555443221       223355


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .++..+.+++.+||+.+|++||++.++++.|+..
T Consensus       227 ~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         227 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            6889999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.95  E-value=7.1e-27  Score=186.54  Aligned_cols=177  Identities=33%  Similarity=0.647  Sum_probs=143.8

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++.+.+.+.+.||+|+||.||++...    .+..+++|.++      ..+.+|++++++++|+|++++++.+.. ...
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   75 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI   75 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEec----CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence            7889999999999999999999999864    45679999874      457889999999999999999999877 678


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +||+                         
T Consensus        76 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          76 YIITEFM-AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             EEEEEeC-CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            9999999 999999998653                               1221                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++|+||||+++++++++ |..||.+.+..+....+....       ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  226 (260)
T cd05073         155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGY-------RMPRPE  226 (260)
T ss_pred             CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHhCCC-------CCCCcc
Confidence                                1123456789999999999999985 468998877766655543321       233456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ..+.++.+++.+||+.+|++||++.++...|+.
T Consensus       227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=1e-26  Score=186.60  Aligned_cols=182  Identities=32%  Similarity=0.605  Sum_probs=145.6

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +++.+++.+.+.||+|+||.||+|...........|++|...        +.+.+|+.+++.+.|+|++++++++.+ +.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~   80 (270)
T cd05056           2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP   80 (270)
T ss_pred             eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence            567788999999999999999999886432234678999874        457889999999999999999998865 45


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++|+|.+++...                              +|++                         
T Consensus        81 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          81 VWIVMELA-PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             cEEEEEcC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence            78999999 999999998653                              1111                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||++. |..||.+.+..+....+....       ..+.+.
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~pf~~~~~~~~~~~~~~~~-------~~~~~~  231 (270)
T cd05056         160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILML-GVKPFQGVKNNDVIGRIENGE-------RLPMPP  231 (270)
T ss_pred             ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-------cCCCCC
Confidence                                1223467889999999999999874 468998877766555544322       334567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .++.++.+++.+||..+|.+|||+.+++..|+.+.
T Consensus       232 ~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         232 NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=7.8e-27  Score=187.12  Aligned_cols=176  Identities=30%  Similarity=0.595  Sum_probs=138.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC-----
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQP-----   98 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~-----   98 (228)
                      |.+.+.||+|+||.||.|...........||+|.++         ..+.+|+..++.++|+||+++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            457789999999999999886532235789999884         347889999999999999999998865443     


Q ss_pred             -CeEEEeeccccCCHHHHhhhC-----------------------------------Cccc-------------------
Q psy796           99 -PWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT-------------------  123 (228)
Q Consensus        99 -~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~-------------------  123 (228)
                       .++++||+ ++|+|..++...                                   +|++                   
T Consensus        81 ~~~~v~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          81 KPMVILPFM-KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             ccEEEEecc-CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence             78999999 999998887321                                   2222                   


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++||||||+++|||+++ +..||.+....+....+....      
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~------  232 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR-GQTPYPGVENHEIYDYLRHGN------  232 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC------
Confidence                                       1124467889999999999999996 468898877776665554321      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       233 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         233 -RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             2334667889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=5.7e-27  Score=186.54  Aligned_cols=178  Identities=33%  Similarity=0.638  Sum_probs=145.1

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |.++..++++.+.||+|+||.||++..     .++.|++|.++      ..+.+|+.++..++|+|++++++++.+.+..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~g~v~~~~~-----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   75 (256)
T cd05039           1 WAINSKELKLGATIGKGEFGDVMLGDY-----RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL   75 (256)
T ss_pred             CccChhhccceeeeecCCCceEEEEEe-----cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCe
Confidence            456778899999999999999999986     57889999995      3577899999999999999999999988889


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +||+                         
T Consensus        76 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~  154 (256)
T cd05039          76 YIVTEYM-AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ  154 (256)
T ss_pred             EEEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc
Confidence            9999999 999999988543                               1222                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||++++||++. |..||...+..++...+....       ....+..+++
T Consensus       155 ~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  226 (256)
T cd05039         155 GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF-GRVPYPRIPLKDVVPHVEKGY-------RMEAPEGCPP  226 (256)
T ss_pred             ccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHhcCC-------CCCCccCCCH
Confidence                            2224566789999999999999975 468888777766655554321       2234556789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++.+++.+||..+|++||++.+++..|+.+
T Consensus       227 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         227 EVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=8.9e-27  Score=189.06  Aligned_cols=184  Identities=32%  Similarity=0.632  Sum_probs=146.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++..++.+.+.||+|+||.||++......  .....+++|.++       ..+.+|++++++++|+||+++++++.....
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            45677889999999999999999865321  145678999884       457899999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc----------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT----------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~----------  123 (228)
                      .+++|||+ ++++|.+++..+                                             +||+          
T Consensus        82 ~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~  160 (291)
T cd05094          82 LIMVFEYM-KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL  160 (291)
T ss_pred             eEEEEecC-CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence            99999999 999999998532                                             1222          


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          .....++.++||||||+++|||+++ |..||...+..+....+.
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~-g~~p~~~~~~~~~~~~~~  239 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTY-GKQPWFQLSNTEVIECIT  239 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHh
Confidence                                                1223457789999999999999985 468888777766655543


Q ss_pred             HhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                      ...       ....+..++.++.+++.+||+.+|.+||++.+|++.|+.+.+.
T Consensus       240 ~~~-------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         240 QGR-------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             CCC-------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            321       2223556789999999999999999999999999999999443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.7e-27  Score=194.91  Aligned_cols=176  Identities=20%  Similarity=0.291  Sum_probs=140.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|++.+.||+|+||.||+|....   .+..||+|.++          ..+.+|++++..++|+||+++++++...+..++
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKD---TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEE
Confidence            58899999999999999999875   67899999884          236679999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++|+|.+++...                             +||+                             
T Consensus        79 v~e~~-~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~  157 (333)
T cd05600          79 AMEYV-PGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS  157 (333)
T ss_pred             EEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCC
Confidence            99999 999999998653                             2333                             


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++|||||||++|||++  |..||...+..+....+.........+........++.++.+
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  235 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLC--GFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD  235 (333)
T ss_pred             cccCccccChhHhcCCCCCCccceecchHHHhhhhh--CCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence                        233467899999999999999999  679998887776666554332111100000111256899999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+||+.+|.+||++.+++++
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhC
Confidence            9999999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.95  E-value=6.2e-27  Score=193.47  Aligned_cols=182  Identities=18%  Similarity=0.262  Sum_probs=139.2

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++..++|++.+.||+|+||.||++....   .+..+|+|.+.        ..+.+|++++.+++|+||+++++++...+.
T Consensus         1 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   77 (331)
T cd06649           1 ELKDDDFERISELGAGNGGVVTKVQHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE   77 (331)
T ss_pred             CCCcccceEEEeecCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            3567889999999999999999998865   67889999873        458899999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++|+|.+++...                              +||+                         
T Consensus        78 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  156 (331)
T cd06649          78 ISICMEHM-DGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (331)
T ss_pred             EEEEeecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence            99999999 999999887543                              2332                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC---Cc--------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG---EL--------  175 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~--------  175 (228)
                                       ..+..++.++||||||+++|||++  |..||......++...+.......   ..        
T Consensus       157 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (331)
T cd06649         157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAI--GRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR  234 (331)
T ss_pred             cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence                             233457889999999999999999  668887655544332221100000   00        


Q ss_pred             ----------------------------cccCC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          176 ----------------------------QVFLP-KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       176 ----------------------------~~~~~-~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                                                  ..... ....++.++.+|+.+||+.+|++|||+.+++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                                        00000 1124678999999999999999999999999753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.95  E-value=8.4e-27  Score=186.13  Aligned_cols=177  Identities=34%  Similarity=0.622  Sum_probs=141.3

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |+++.+++.+.+.||+|+||.||++...    .+..+++|.+.      ..+.+|+.+++.+.|+|++++++++. .+..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~   75 (260)
T cd05069           1 WEIPRESLRLDVKLGQGCFGEVWMGTWN----GTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPI   75 (260)
T ss_pred             CcCChHHeeeeeeecCcCCCeEEEEEEc----CCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCc
Confidence            5678888999999999999999999875    34569999874      46789999999999999999999875 4567


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               +|++                         
T Consensus        76 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05069          76 YIVTEFM-GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIED  154 (260)
T ss_pred             EEEEEcC-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccC
Confidence            9999999 989999988642                               1222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++|||+++ +..||.+.........+....       ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  226 (260)
T cd05069         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK-GRVPYPGMVNREVLEQVERGY-------RMPCPQ  226 (260)
T ss_pred             CcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCCCCc
Confidence                                1123456789999999999999995 368898877666555543321       223455


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ..+..+.+++.+||+.+|.+||++++|.+.|+.
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         227 GCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.95  E-value=9.4e-27  Score=187.57  Aligned_cols=180  Identities=31%  Similarity=0.532  Sum_probs=143.5

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ++..++|.+.+.||+|+||.||+|.+....  .....|++|.+.        ..+.+|+.+++.++|+||+++++++...
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (277)
T cd05036           2 EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER   81 (277)
T ss_pred             CCCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            455677999999999999999999986421  135789999873        4578899999999999999999999888


Q ss_pred             CCCeEEEeeccccCCHHHHhhhCC------------------------------------ccc-----------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSAD------------------------------------NLT-----------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~r------------------------------------~l~-----------------  123 (228)
                      ...+++|||+ ++++|.+++...+                                    ||+                 
T Consensus        82 ~~~~lv~e~~-~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          82 LPRFILLELM-AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             CCcEEEEecC-CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence            8899999999 9999999875431                                    111                 


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      .....++.++|||||||++|||+++ +..||.+.+.......+.... 
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~-g~~pf~~~~~~~~~~~~~~~~-  238 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL-GYMPYPGRTNQEVMEFVTGGG-  238 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCC-
Confidence                                            0123467889999999999999975 468998877766554443221 


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                            ....+..++.++.+++.+||+.+|++||++.+|+++|+
T Consensus       239 ------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         239 ------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             ------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence                  23446678899999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0201|consensus

Probab=99.95  E-value=5.7e-29  Score=202.25  Aligned_cols=171  Identities=20%  Similarity=0.358  Sum_probs=141.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ...|+..+.||+|+||.||+|....   .++.||+|++.        +++++|+.+|.+++++||.+++|.+.....+++
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~---t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwi   88 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNK---TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWI   88 (467)
T ss_pred             ccccccchhccccccceeeeeeecc---ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHH
Confidence            3445666899999999999999876   78999999994        668999999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||| .+|++.+.|...                             ||++                             
T Consensus        89 iMey~-~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen   89 IMEYC-GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR  167 (467)
T ss_pred             HHHHh-cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence            99999 999998877654                             3333                             


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     +....|+.|+||||||++.+||.+  |.+|+.+..+....-.+....     +  +.....++..
T Consensus       168 r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~--GePP~s~~hPmrvlflIpk~~-----P--P~L~~~~S~~  238 (467)
T KOG0201|consen  168 RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK--GEPPHSKLHPMRVLFLIPKSA-----P--PRLDGDFSPP  238 (467)
T ss_pred             cccccccccccchhhhccccccchhhhhhhhHHHHHHhc--CCCCCcccCcceEEEeccCCC-----C--CccccccCHH
Confidence                           556689999999999999999999  789999887754433332210     1  1112367889


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++++..|+..+|+.||++.++++|
T Consensus       239 ~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  239 FKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhhh
Confidence            9999999999999999999999874

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=5.4e-27  Score=186.26  Aligned_cols=167  Identities=38%  Similarity=0.753  Sum_probs=135.0

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|+||.||+|....   +++.||+|.+.        ..+.+|++++++++|+||+++++++...+..+++|||+ +
T Consensus         1 ~~lg~g~~g~vy~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRA---DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV-Q   76 (252)
T ss_pred             CccCcccCccEEEEEEec---CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeec-c
Confidence            368999999999999876   67899999763        45789999999999999999999999988999999999 9


Q ss_pred             cCCHHHHhhhC------------------------------Cccc-----------------------------------
Q psy796          109 LGDLVQHLNSA------------------------------DNLT-----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~------------------------------r~l~-----------------------------------  123 (228)
                      +++|.+++...                              +|++                                   
T Consensus        77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  156 (252)
T cd05084          77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK  156 (252)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence            99999998543                              1221                                   


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||+++ +..||...+.......+....       ..+.+..++.++.++
T Consensus       157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~-~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l  228 (252)
T cd05084         157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSL-GAVPYANLSNQQTREAIEQGV-------RLPCPELCPDAVYRL  228 (252)
T ss_pred             CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhC-CCCCccccCHHHHHHHHHcCC-------CCCCcccCCHHHHHH
Confidence                       1123456779999999999999985 468887777665554443321       234466788999999


Q ss_pred             HHHhhccCCCCCCCHHHHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +.+||+.+|++|||+.++++.|+
T Consensus       229 i~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         229 MERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHh
Confidence            99999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.95  E-value=8.4e-27  Score=185.64  Aligned_cols=178  Identities=31%  Similarity=0.604  Sum_probs=143.5

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeee-CCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCT-GEQPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~-~~~~~   99 (228)
                      |.++.+++.+.+.||+|+||.||++..     .+..|++|.++     ..+.+|+.++++++|+|++++++++. ..+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05082           1 WALNMKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   75 (256)
T ss_pred             CCccHHhCeeeeeecccCCCeEEEEEE-----cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence            567788899999999999999999976     56789999885     45789999999999999999999765 44578


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||+ ++++|.+++...                               ++|+                         
T Consensus        76 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082          76 YIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             EEEEECC-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence            9999999 999999988643                               2222                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||++. |..||......+....+....       ....+..++.
T Consensus       155 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  226 (256)
T cd05082         155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF-GRVPYPRIPLKDVVPRVEKGY-------KMDAPDGCPP  226 (256)
T ss_pred             cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHhcCC-------CCCCCCCCCH
Confidence                            2233567889999999999999985 368888776666655554321       2234567889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         227 VVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.95  E-value=3.8e-27  Score=196.35  Aligned_cols=176  Identities=16%  Similarity=0.207  Sum_probs=132.3

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      ...++++..+.||+|+||.||++....   +++.||+|.+.        ..+.+|+++++.++|+||+++++++...+..
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRP---TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECC---CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence            344677888999999999999998865   67899999883        4578999999999999999999999888899


Q ss_pred             eEEEeeccccCCHHHH---------------------hhhC----Cccc-------------------------------
Q psy796          100 WLVMEYPAQLGDLVQH---------------------LNSA----DNLT-------------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~---------------------l~~~----r~l~-------------------------------  123 (228)
                      +++|||+ .+|+|.+.                     ||..    +||+                               
T Consensus       148 ~lv~e~~-~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  226 (353)
T PLN00034        148 QVLLEFM-DGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN  226 (353)
T ss_pred             EEEEecC-CCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence            9999999 98888542                     2221    3433                               


Q ss_pred             -------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                   +     .+...+.++|||||||++|||++  |..||......+....+.......    ....+..+
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~  300 (353)
T PLN00034        227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL--GRFPFGVGRQGDWASLMCAICMSQ----PPEAPATA  300 (353)
T ss_pred             ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCccHHHHHHHHhccC----CCCCCCcc
Confidence                         0     01112358999999999999999  668887433222222121111110    23345678


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|++|||+.+++++
T Consensus       301 ~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        301 SREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            8999999999999999999999999985

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=5.2e-27  Score=194.62  Aligned_cols=180  Identities=17%  Similarity=0.236  Sum_probs=146.6

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      .+.....+..++|.+.+.||+|+||.||+|.....  ....||+|.+.          ..+.+|+.++..++||||++++
T Consensus        20 ~~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~   97 (340)
T PTZ00426         20 EPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNE--DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLY   97 (340)
T ss_pred             ccccCCCCChhhcEEEEEEeecCCeEEEEEEEECC--CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceE
Confidence            34466777888999999999999999999987541  33689999873          3366799999999999999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------  123 (228)
                      +++.+.+..+++|||+ ++|+|.+++.+.                             |||+                  
T Consensus        98 ~~~~~~~~~~lv~Ey~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG  176 (340)
T PTZ00426         98 GSFKDESYLYLVLEFV-IGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFG  176 (340)
T ss_pred             EEEEeCCEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCC
Confidence            9999998999999999 999999988654                             3333                  


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             ..+..++.++|||||||++|||++  |..||.+.+.......+...        ...
T Consensus       177 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~--G~~Pf~~~~~~~~~~~i~~~--------~~~  246 (340)
T PTZ00426        177 FAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV--GCPPFYANEPLLIYQKILEG--------IIY  246 (340)
T ss_pred             CCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc--CCCCCCCCCHHHHHHHHhcC--------CCC
Confidence                                   223456789999999999999999  67899887776666665543        233


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .|..++.++.+++.+||+.+|.+|+     ++++++++
T Consensus       247 ~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        247 FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            5667889999999999999999995     88888764

>KOG1187|consensus

Probab=99.95  E-value=7.9e-27  Score=193.76  Aligned_cols=181  Identities=25%  Similarity=0.391  Sum_probs=133.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-CCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-PPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-~~~lv  102 (228)
                      ++|.-.+.||+|+||.||+|...    ++..||||.+.       .+|.+|+.++.+++|+|+++++|||.+.+ ...||
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~----~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLS----DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEEC----CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            45666689999999999999996    45899999773       35999999999999999999999999888 49999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------------Cccc------------------------c
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------------DNLT------------------------R  124 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------------r~l~------------------------~  124 (228)
                      +||+ ++|+|.++|+..                                  ||++                        .
T Consensus       151 YEym-~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  151 YEYM-PNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             EEcc-CCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence            9999 999999998764                                  2222                        1


Q ss_pred             ---------------------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC---hHHHHHHHHHhhhCCCccccCC
Q psy796          125 ---------------------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT---NEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       125 ---------------------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                           ..+..+.|+|||||||+++||++|+  .+.+...   ...+..++............+.
T Consensus       230 ~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr--~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD  307 (361)
T KOG1187|consen  230 GDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR--KAVDQSRPRGELSLVEWAKPLLEEGKLREIVD  307 (361)
T ss_pred             cccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC--cccCCCCCcccccHHHHHHHHHHCcchhheeC
Confidence                                 1124678999999999999999953  4444321   2224444433333322221111


Q ss_pred             CC---CCCc-----HHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          181 KP---SLCP-----RDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       181 ~~---~~~~-----~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..   ...+     ..+..+...|++.+|.+||+|.+|++.|+.+.
T Consensus       308 ~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  308 PRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             CCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            11   1222     23567778999999999999999999997763

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=1.6e-26  Score=189.57  Aligned_cols=189  Identities=31%  Similarity=0.577  Sum_probs=151.3

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEecc----CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcc
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI----ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLV   87 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~----~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv   87 (228)
                      +....|.++.+++.+.+.||+|+||.||++.....    ......+|+|.++        .++.+|+.++.++ +|+||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv   81 (314)
T cd05099           2 PLDPKWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNII   81 (314)
T ss_pred             CCcccccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCee
Confidence            33467889999999999999999999999976321    1135679999874        3467899999999 699999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Ccc
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNL  122 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l  122 (228)
                      ++++++......+++|||+ ++|+|.+++...                                             +||
T Consensus        82 ~~~~~~~~~~~~~lv~e~~-~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dl  160 (314)
T cd05099          82 NLLGVCTQEGPLYVIVEYA-AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDL  160 (314)
T ss_pred             eEEEEEccCCceEEEEecC-CCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            9999998888899999999 999999988541                                             122


Q ss_pred             c----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC
Q psy796          123 T----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH  156 (228)
Q Consensus       123 ~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~  156 (228)
                      +                                              .....++.++||||||+++|||+++ +..||.+
T Consensus       161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~-g~~p~~~  239 (314)
T cd05099         161 AARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTL-GGSPYPG  239 (314)
T ss_pred             cceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhC-CCCCCCC
Confidence            1                                              1223467789999999999999996 3588888


Q ss_pred             CChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          157 LTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+..++...+....       ....+..++.++.+++.+||+.+|++|||+.++++.|+++.
T Consensus       240 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         240 IPVEELFKLLREGH-------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             CCHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            77776666554321       23446678899999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.95  E-value=9.8e-27  Score=188.41  Aligned_cols=181  Identities=31%  Similarity=0.602  Sum_probs=144.0

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      +++..+|++.+.||+|+||.||++.....  ...+..||+|.+.        ..+.+|+.++..+.|+|++++++++...
T Consensus         1 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           1 EYPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             CCChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            35678899999999999999999987431  1146789999873        4478899999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC---------------------------------------------------Cccc--
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------------DNLT--  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------------r~l~--  123 (228)
                      ...++++||+ ++|+|.+++...                                                   ++++  
T Consensus        81 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          81 KPMCLLFEYM-AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CccEEEEecC-CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            8899999999 999999988531                                                   1111  


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  .....++.++|||||||++|||++. +..||.+.+.
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~-~~~p~~~~~~  238 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY-GMQPYYGMAH  238 (288)
T ss_pred             heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCCH
Confidence                                                        1224567789999999999999985 3578887777


Q ss_pred             HHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          160 EQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .+....+....       ..+.+..++.++.+++.+||+.+|++|||+.++++.|++
T Consensus       239 ~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         239 EEVIYYVRDGN-------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            76655554321       223456788999999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=1.4e-26  Score=184.49  Aligned_cols=169  Identities=30%  Similarity=0.559  Sum_probs=133.8

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      .||+|+||.||+|.+.... .+..+|+|.++         ..+.+|+.++..+.|+||++++|++.. ...+++|||+ +
T Consensus         2 ~lg~G~~g~v~~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~-~   78 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKK-SEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELA-E   78 (257)
T ss_pred             cCCCcCCcceEEeEEecCC-CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecC-C
Confidence            5899999999999875322 56889999873         457889999999999999999998854 4578999999 9


Q ss_pred             cCCHHHHhhhC-----------------------------Cccc------------------------------------
Q psy796          109 LGDLVQHLNSA-----------------------------DNLT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-----------------------------r~l~------------------------------------  123 (228)
                      +|+|.+++...                             +|++                                    
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence            99999988654                             2222                                    


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||+++ |..||...+.......+....       ..+.|..++.++.++
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~i~~~~-------~~~~~~~~~~~l~~l  230 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSY-GQKPYKGMKGNEVTQMIESGE-------RMECPQRCPPEMYDL  230 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHCCC-------CCCCCCCCCHHHHHH
Confidence                       1112345689999999999999984 468998877766665554322       334566789999999


Q ss_pred             HHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+||+.+|++||++.+|...|+..
T Consensus       231 i~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         231 MKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHhccCchhCcCHHHHHHHHhcc
Confidence            9999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=1.7e-26  Score=187.95  Aligned_cols=178  Identities=28%  Similarity=0.568  Sum_probs=141.3

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~  100 (228)
                      +++|++.++||+|+||.||+|...... ....+++|.++        ..+.+|++++.++ +|+||+++++++...+..+
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            367899999999999999999876421 12346777774        3578899999999 7999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------------------Cccc------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~------------  123 (228)
                      +++||+ ++++|.+++...                                             +||+            
T Consensus        80 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          80 IAIEYA-PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEEEec-CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence            999999 999999888531                                             2222            


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     .....++.++||||||+++|||++. |..||.+....+....+....  
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~-g~~pf~~~~~~~~~~~~~~~~--  235 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGY--  235 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHhcCC--
Confidence                                           1223467899999999999999974 458998877766655443221  


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                           ....+..++.++.+++.+||+.+|.+||++.++++.|+.+
T Consensus       236 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         236 -----RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                 2334567889999999999999999999999999999888

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=1.3e-26  Score=189.34  Aligned_cols=181  Identities=28%  Similarity=0.567  Sum_probs=141.7

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~   97 (228)
                      .+..++|++.+.||+|+||.||+|..... .....+++|.++        ..+.+|++++.++ +|+||+++++++...+
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~   81 (303)
T cd05088           3 VLEWNDIKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   81 (303)
T ss_pred             ccchhhceeeeeecCCCCceEEEEEEccC-CceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence            45667899999999999999999988641 122456777663        3477899999999 8999999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---------  123 (228)
                      ..+++|||+ ++++|.++++..                                             +||+         
T Consensus        82 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~  160 (303)
T cd05088          82 YLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  160 (303)
T ss_pred             CceEEEEeC-CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence            999999999 999999888532                                             2222         


Q ss_pred             ----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHh
Q psy796          124 ----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHM  169 (228)
Q Consensus       124 ----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~  169 (228)
                                                        .....++.++||||||++++||+++ +..||.+.+..+....+...
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~~~~~~~~~~~~~~~  239 (303)
T cd05088         161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKLPQG  239 (303)
T ss_pred             CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhc-CCCCcccCChHHHHHHHhcC
Confidence                                              1123457889999999999999985 35888877766555444321


Q ss_pred             hhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          170 YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .       ....+..++.++.+++.+||+.+|++||++.++++.|+.+
T Consensus       240 ~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         240 Y-------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             C-------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1       2234556788999999999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=1.5e-26  Score=186.72  Aligned_cols=179  Identities=33%  Similarity=0.610  Sum_probs=142.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      |.++++.+.+.||+|+||.||++.....  ...+..+++|.++       ..+.+|++++..++|+||+++++++.....
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            5678899999999999999999975421  1145688999874       468899999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC--------------------------------------------Cccc-----------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA--------------------------------------------DNLT-----------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~--------------------------------------------r~l~-----------  123 (228)
                      .+++|||+ ++++|.+++...                                            ++|+           
T Consensus        82 ~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~  160 (280)
T cd05092          82 LLMVFEYM-RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV  160 (280)
T ss_pred             eEEEEecC-CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence            99999999 999999888542                                            1111           


Q ss_pred             -----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q psy796          124 -----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH  168 (228)
Q Consensus       124 -----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~  168 (228)
                                                         .....++.++||||||+++|||+++ +..||......+....+..
T Consensus       161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05092         161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTY-GKQPWYQLSNTEAIECITQ  239 (280)
T ss_pred             EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcC-CCCCCccCCHHHHHHHHHc
Confidence                                               1223457889999999999999985 4688877766655544433


Q ss_pred             hhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          169 MYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ..       ....+..++.++.+++.+||+.+|.+||++.+|...|+
T Consensus       240 ~~-------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         240 GR-------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             Cc-------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            21       23345678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.95  E-value=1.3e-26  Score=184.29  Aligned_cols=174  Identities=30%  Similarity=0.587  Sum_probs=140.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +.+++++.+.||+|+||.||++.+.    .+..+++|.++      ..+.+|++++++++|+|++++++++......+++
T Consensus         2 ~~~~~~~~~~ig~g~~g~v~~~~~~----~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           2 HPSELTLVQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             ChhHeEEEeeecCcccceEEEEEEe----CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence            4567899999999999999999875    46789999874      4688999999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ ++++|.+++...                              +|++                             
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          78 FEFM-EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             EEcC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence            9999 999999988643                              1111                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||++. +..||...........+....       ....+...+.
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  228 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSE-GKTPYENRSNSEVVETINAGF-------RLYKPRLASQ  228 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcC-CCCCCCcCCHHHHHHHHhCCC-------CCCCCCCCCH
Confidence                            1124456789999999999999985 468888777666665554321       2233555789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ++.+++.+||+.+|++|||+.++++.|+
T Consensus       229 ~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         229 SVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            9999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0582|consensus

Probab=99.95  E-value=9.9e-27  Score=189.68  Aligned_cols=184  Identities=17%  Similarity=0.297  Sum_probs=148.4

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...|.+..++|++.++||.|.-+.||+|+...   .+..||||++.        ..+.+|++.++.++||||++++-.|.
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p---~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIP---TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV   94 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecc---cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence            46788899999999999999999999999876   67999999994        55789999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                      .++.+|+||.|+ .+|++.+.+...                               ||+|                    
T Consensus        95 v~~~LWvVmpfM-a~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs  173 (516)
T KOG0582|consen   95 VDSELWVVMPFM-AGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS  173 (516)
T ss_pred             ecceeEEeehhh-cCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence            999999999999 999998876543                               4554                    


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .+...|+.|+||||||++..||.+  |..||....+.+++..-.++....
T Consensus       174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~--G~aPf~k~pPmkvLl~tLqn~pp~  251 (516)
T KOG0582|consen  174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH--GHAPFSKYPPMKVLLLTLQNDPPT  251 (516)
T ss_pred             eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc--CCCCcccCChHHHHHHHhcCCCCC
Confidence                                          344579999999999999999999  679999998887654332221100


Q ss_pred             Cc--cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          174 EL--QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       174 ~~--~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ..  ..........+..++.++..|++.||..|||+++++.
T Consensus       252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            00  0000011235667999999999999999999999996

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.95  E-value=7.5e-27  Score=193.92  Aligned_cols=185  Identities=28%  Similarity=0.538  Sum_probs=141.9

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      +|+++.++|++.+.||+|+||.||+|.+...  ...++.||||.++        ..+.+|+.++.++ +|+||+++++++
T Consensus         1 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (343)
T cd05103           1 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   80 (343)
T ss_pred             CcccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence            4889999999999999999999999985421  1156889999884        3467899999999 689999999988


Q ss_pred             eCC-CCCeEEEeeccccCCHHHHhhhC-----------------------------------------------------
Q psy796           94 TGE-QPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------------  119 (228)
Q Consensus        94 ~~~-~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------------  119 (228)
                      ... ...+++|||+ ++|+|.++++..                                                     
T Consensus        81 ~~~~~~~~lv~ey~-~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (343)
T cd05103          81 TKPGGPLMVIVEFC-KFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS  159 (343)
T ss_pred             ecCCCceEEEEecc-CCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence            654 4678999999 999999887531                                                     


Q ss_pred             -------------------------------------------Cccc---------------------------------
Q psy796          120 -------------------------------------------DNLT---------------------------------  123 (228)
Q Consensus       120 -------------------------------------------r~l~---------------------------------  123 (228)
                                                                 +||+                                 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  239 (343)
T cd05103         160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG  239 (343)
T ss_pred             cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence                                                       2222                                 


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-HHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-VIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                   .....++.++||||||+++|||+++ |..||....... ....+....       ....|...+.++
T Consensus       240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  311 (343)
T cd05103         240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKIDEEFCRRLKEGT-------RMRAPDYTTPEM  311 (343)
T ss_pred             CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHC-CCCCCCCccccHHHHHHHhccC-------CCCCCCCCCHHH
Confidence                         1123457789999999999999975 467887654432 222222111       233355577899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+++..||+.+|++|||+.+|+++|+.+.
T Consensus       312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         312 YQTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0588|consensus

Probab=99.95  E-value=2.3e-27  Score=201.32  Aligned_cols=167  Identities=22%  Similarity=0.344  Sum_probs=150.5

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +++++.||.|+-|.|.+|++..   +|+.+|||++.          ..+.+|+-+|+-+.||||+++++++.++...|++
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~---TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAE---TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             eeccccccCCCCceehhhhccc---ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            5789999999999999999876   89999999994          3478999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      .||+ ++|.|++||.++                             |||+                              
T Consensus        91 lEyv-~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe  169 (786)
T KOG0588|consen   91 LEYV-PGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE  169 (786)
T ss_pred             EEec-CCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence            9999 999999999765                             4554                              


Q ss_pred             -------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                   ..+..| +.++||||.||+|+-|++  |..||++.+...++.++.++        .+..|.+++.++
T Consensus       170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLt--G~LPFdDdNir~LLlKV~~G--------~f~MPs~Is~ea  239 (786)
T KOG0588|consen  170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLT--GKLPFDDDNIRVLLLKVQRG--------VFEMPSNISSEA  239 (786)
T ss_pred             ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHh--CCCCCCCccHHHHHHHHHcC--------cccCCCcCCHHH
Confidence                         444455 489999999999999999  67999999999999988887        577899999999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+|+.+|+..||+.|-|+++|+.|
T Consensus       240 QdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  240 QDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHHHhccCccccccHHHHhhC
Confidence            999999999999999999999985

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=9.3e-27  Score=192.92  Aligned_cols=184  Identities=30%  Similarity=0.560  Sum_probs=141.6

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      +|+++.++|++.++||+|+||.||+|......  ..++.||+|.++        ..+.+|++++.++ +|+||+++++++
T Consensus         1 ~~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           1 KWEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             CcccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence            48899999999999999999999999754311  135789999874        3467899999999 899999999988


Q ss_pred             eCC-CCCeEEEeeccccCCHHHHhhhC-----------------------------------------------------
Q psy796           94 TGE-QPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------------  119 (228)
Q Consensus        94 ~~~-~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------------  119 (228)
                      ... ...+++|||+ ++++|.+++...                                                     
T Consensus        81 ~~~~~~~~~v~ey~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
T cd05054          81 TKPGGPLMVIVEYC-KFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED  159 (337)
T ss_pred             ecCCCCEEEEEecC-CCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence            654 5678999999 999999887421                                                     


Q ss_pred             -------------------------------------Cccc---------------------------------------
Q psy796          120 -------------------------------------DNLT---------------------------------------  123 (228)
Q Consensus       120 -------------------------------------r~l~---------------------------------------  123 (228)
                                                           +|++                                       
T Consensus       160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~  239 (337)
T cd05054         160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL  239 (337)
T ss_pred             hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence                                                 2222                                       


Q ss_pred             -------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhhhCCCccccCCCCCCCcHHHHHHHHH
Q psy796          124 -------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD  195 (228)
Q Consensus       124 -------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  195 (228)
                             .....++.++|||||||+++||++. +..||.+....+.. ..+....       ....+..++.++.+++.+
T Consensus       240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~-g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~  311 (337)
T cd05054         240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSL-GASPYPGVQIDEEFCRRLKEGT-------RMRAPEYATPEIYSIMLD  311 (337)
T ss_pred             cccCcHHhcCCCCCccccHHHHHHHHHHHHHc-CCCCCCCCCccHHHHHHHhccC-------CCCCCccCCHHHHHHHHH
Confidence                   1123467789999999999999974 35888765543322 2222111       233455678899999999


Q ss_pred             hhccCCCCCCCHHHHHHHHHHH
Q psy796          196 CWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       196 c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ||+.+|++||++.+|+++|+.+
T Consensus       312 cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         312 CWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             HccCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.95  E-value=3.1e-26  Score=184.68  Aligned_cols=183  Identities=27%  Similarity=0.522  Sum_probs=145.2

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccC-CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC-C
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIE-LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG-E   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~-~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~-~   96 (228)
                      .+.+++|.+.++||+|+||.||+|...... ..+..|++|.++        ..+.+|+.+++.++|+|++++++++.. .
T Consensus         2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   81 (280)
T cd05043           2 AISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG   81 (280)
T ss_pred             ccchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            467788999999999999999999986421 126889999884        447889999999999999999998766 4


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------------Cccc----------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------------DNLT----------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------r~l~----------------  123 (228)
                      ...+++++|+ ++|+|.+++...                                     ++++                
T Consensus        82 ~~~~~~~~~~-~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          82 EPPFVLYPYM-NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CCCEEEEEcC-CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence            5789999999 899999998542                                     1111                


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++||++++ +..||...+..+....+....   
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~---  236 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL-GQTPYVEIDPFEMAAYLKDGY---  236 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC-CCCCcCcCCHHHHHHHHHcCC---
Confidence                                          1123467889999999999999985 358998877766655544321   


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                          ....+..+++++.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       237 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         237 ----RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             ----CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                23345567899999999999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=2.8e-26  Score=189.75  Aligned_cols=189  Identities=29%  Similarity=0.572  Sum_probs=151.3

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccC----CCceeEEeecch--------HHHHHHHHHHhhC-CCCCcc
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE----LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLV   87 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~----~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv   87 (228)
                      |....|++...++++.+.||+|+||.||++......    .....||+|.++        ..+.+|++++.++ +|+||+
T Consensus         2 ~~~~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv   81 (334)
T cd05100           2 PADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNII   81 (334)
T ss_pred             CCCcccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCee
Confidence            345789999999999999999999999999864311    123578999874        3578899999999 799999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Ccc
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNL  122 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l  122 (228)
                      ++++++......++++||+ ++|+|.+++...                                             +|+
T Consensus        82 ~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dl  160 (334)
T cd05100          82 NLLGACTQDGPLYVLVEYA-SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDL  160 (334)
T ss_pred             eeeEEEccCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            9999998888899999999 999999988531                                             111


Q ss_pred             c----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC
Q psy796          123 T----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH  156 (228)
Q Consensus       123 ~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~  156 (228)
                      +                                              .....++.++||||||+++|||+++ +..||.+
T Consensus       161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~  239 (334)
T cd05100         161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL-GGSPYPG  239 (334)
T ss_pred             ccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhc-CCCCCCC
Confidence            1                                              1123466789999999999999986 3588988


Q ss_pred             CChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          157 LTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+..+....+....       ..+.+..++.++.+++.+||+.+|.+||++.+++..|+++.
T Consensus       240 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         240 IPVEELFKLLKEGH-------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             CCHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            77776665554321       33456678899999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.3e-26  Score=182.29  Aligned_cols=172  Identities=34%  Similarity=0.649  Sum_probs=137.1

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|+||.||+|.+.........+++|.+.        ..+.+|+++++.+.|+|++++++++.. +..+++|||+ +
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~-~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA-P   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC-C
Confidence            36899999999999886543334789999874        357789999999999999999998764 4579999999 9


Q ss_pred             cCCHHHHhhhC-----------------------------Cccc------------------------------------
Q psy796          109 LGDLVQHLNSA-----------------------------DNLT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-----------------------------r~l~------------------------------------  123 (228)
                      +|+|.+++...                             +||+                                    
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~  158 (257)
T cd05060          79 LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG  158 (257)
T ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence            99999998754                             1222                                    


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||+++ +..||...+..+....+....       ..+.+..++..++++
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~l  230 (257)
T cd05060         159 RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSY-GAKPYGEMKGAEVIAMLESGE-------RLPRPEECPQEIYSI  230 (257)
T ss_pred             cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcC-CCCCcccCCHHHHHHHHHcCC-------cCCCCCCCCHHHHHH
Confidence                       1223456789999999999999985 468998877766665554322       334566788999999


Q ss_pred             HHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          193 MCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +.+||+.+|.+||++.++++.|+.+.
T Consensus       231 i~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         231 MLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            99999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=3.3e-26  Score=182.62  Aligned_cols=173  Identities=28%  Similarity=0.576  Sum_probs=134.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC-CCCCeEEEeecc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG-EQPPWLVMEYPA  107 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~lv~e~~~  107 (228)
                      +.||+|+||.||+|...........||+|.+.        ..+.+|+.+++.++|+|++++++++.. +...+++|||+ 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~-   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM-   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC-
Confidence            36899999999999875433345789999873        356789999999999999999998754 44679999999 


Q ss_pred             ccCCHHHHhhhC------------------------------Cccc----------------------------------
Q psy796          108 QLGDLVQHLNSA------------------------------DNLT----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~------------------------------r~l~----------------------------------  123 (228)
                      ++|+|.+++...                              +|++                                  
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            999999988643                              2222                                  


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    .....++.++||||||+++|||+++ +.+||...+..+....+....       ..+.+..++..+
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  231 (262)
T cd05058         160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVDSFDITVYLLQGR-------RLLQPEYCPDPL  231 (262)
T ss_pred             ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHhcCC-------CCCCCCcCCHHH
Confidence                          1123456789999999999999996 367887777666555443321       233456678999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+++.+||+.+|++||++.+|+..|+++.
T Consensus       232 ~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         232 YEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1024|consensus

Probab=99.95  E-value=2.1e-27  Score=191.14  Aligned_cols=184  Identities=25%  Similarity=0.486  Sum_probs=155.1

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+.+.++++..++-+|.||+||.|.|+.  ..++.+.|.+|.++        ..+..|.-.|..+.|+|+..+.|++..
T Consensus       279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie  358 (563)
T KOG1024|consen  279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE  358 (563)
T ss_pred             hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence            34455667777889999999999998874  22355788999886        346778888888899999999999865


Q ss_pred             C-CCCeEEEeeccccCCHHHHhhhC-------------------------------------Cccc--------------
Q psy796           96 E-QPPWLVMEYPAQLGDLVQHLNSA-------------------------------------DNLT--------------  123 (228)
Q Consensus        96 ~-~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------r~l~--------------  123 (228)
                      + ..+++++.+. .-|+|..||...                                     +|++              
T Consensus       359 ~~~~P~V~y~~~-~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  359 DYATPFVLYPAT-GVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             ccCcceEEEecc-CcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence            4 5778999998 789999999732                                     1111              


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      +.+..|+.++|||||||++|||.|++ ..||.+.++.+....+..++ 
T Consensus       438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg-~~PyaeIDPfEm~~ylkdGy-  515 (563)
T KOG1024|consen  438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLG-KLPYAEIDPFEMEHYLKDGY-  515 (563)
T ss_pred             ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcC-CCCccccCHHHHHHHHhccc-
Confidence                                            66778999999999999999999994 79999999999998888776 


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                            ++..|.+||+++.+++..||...|++||++++++.-|.++.
T Consensus       516 ------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  516 ------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence                  78889999999999999999999999999999999998884

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=3.1e-26  Score=186.95  Aligned_cols=189  Identities=31%  Similarity=0.545  Sum_probs=146.1

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcce
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVS   88 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~   88 (228)
                      ++....+.+..+++.+.+.||+|+||.||++....  .......||+|.++        ..+.+|+.+++++ +|+||++
T Consensus        24 ~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~  103 (302)
T cd05055          24 LPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVN  103 (302)
T ss_pred             ccccccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcce
Confidence            45556788899999999999999999999997632  11145689999874        3478899999999 7999999


Q ss_pred             eeeeeeCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------
Q psy796           89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------  123 (228)
Q Consensus        89 ~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------  123 (228)
                      +++++...+..+++|||+ ++|+|.++++..                               +|++              
T Consensus       104 ~~~~~~~~~~~~lv~e~~-~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l  182 (302)
T cd05055         104 LLGACTIGGPILVITEYC-CYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKI  182 (302)
T ss_pred             EEEEEecCCceEEEEEcC-CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEE
Confidence            999999888999999999 999999988643                               1111              


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMY  170 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~  170 (228)
                                                      .....++.++||||||+++|||++. |..||.+....... ..+....
T Consensus       183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~-g~~p~~~~~~~~~~~~~~~~~~  261 (302)
T cd05055         183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSL-GSNPYPGMPVDSKFYKLIKEGY  261 (302)
T ss_pred             CCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhC-CCCCcCCCCchHHHHHHHHcCC
Confidence                                            1122346789999999999999984 35788776654333 2222111


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                             ....+...+.++.+++.+||..+|++|||+.++++.|++.
T Consensus       262 -------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         262 -------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                   2234556788999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0583|consensus

Probab=99.95  E-value=1.3e-26  Score=192.85  Aligned_cols=171  Identities=24%  Similarity=0.342  Sum_probs=146.5

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH------------HHHHHHHHHhhCC-CCCcceeeeeee
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG------------DSLREIRFLSSLQ-DPNLVSILGVCT   94 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~------------~~~~e~~~l~~l~-h~niv~~~g~~~   94 (228)
                      .....+.+++.||+|+||+|+.|....   .+..||+|++..            .+.+|+.+++.++ ||||++++.++.
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~   90 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA   90 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence            445678999999999999999999876   779999997643            2358999999998 999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      ..+..++||||| .+|+|++++...                             ||||                      
T Consensus        91 t~~~~~ivmEy~-~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen   91 TPTKIYIVMEYC-SGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA  169 (370)
T ss_pred             cCCeEEEEEEec-CCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence            998999999999 999999999764                             5555                      


Q ss_pred             -----------------------cccCC-CC-CccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -----------------------RDRDR-YT-CQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -----------------------~~~~~-~~-~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                             +.... |+ .++||||+||++|-|++  |..||.+.+...+...+..+        .
T Consensus       170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~--G~~PF~d~~~~~l~~ki~~~--------~  239 (370)
T KOG0583|consen  170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLC--GRLPFDDSNVPNLYRKIRKG--------E  239 (370)
T ss_pred             ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHh--CCCCCCCccHHHHHHHHhcC--------C
Confidence                                   33333 54 89999999999999999  67999998888787776654        4


Q ss_pred             CCCCCCC-cHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          179 LPKPSLC-PRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       179 ~~~~~~~-~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +..|..+ +.+++.++.+|+..+|..|+++.+|+.
T Consensus       240 ~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  240 FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            5667777 999999999999999999999999994

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=3.8e-26  Score=183.26  Aligned_cols=175  Identities=29%  Similarity=0.565  Sum_probs=134.4

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC------C
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE------Q   97 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~------~   97 (228)
                      +.+++.||+|+||.||+|.+.... ....||+|.++         ..+.+|+++++.++|+||+++++++...      .
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDD-SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             CccccccCcccCceEEEeEEccCC-CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence            356789999999999999886411 22468999763         4578899999999999999999987432      2


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------------Cccc-------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT-------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~-------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                                   +|++                   
T Consensus        80 ~~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          80 SPVVILPFM-KHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             CcEEEEEeC-CCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCc
Confidence            468999999 999998876311                                   2222                   


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++||||||+++|||+++ +..||.+....+....+....      
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~------  231 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATR-GQTPYPGVENSEIYDYLRQGN------  231 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCC------
Confidence                                       1123457789999999999999995 358898877666655554321      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....+..++..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       232 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 -RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             -CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             2344567889999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=2.3e-26  Score=186.18  Aligned_cols=171  Identities=16%  Similarity=0.246  Sum_probs=134.3

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      |+..+.||+|+||.||++....   ++..||+|.+.          ..+.+|+.++..++|+|++++++++...+..+++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEec---CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEE
Confidence            6778999999999999999876   78899999873          2356899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++|+|.+++...                               +||+                            
T Consensus        79 ~e~~-~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05631          79 LTIM-NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET  157 (285)
T ss_pred             EEec-CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence            9999 999998776432                               2333                            


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     ..+..++.++|||||||++|||++  |..||...+.......+.......    ....+..++.+
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~  231 (285)
T cd05631         158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQ--GQSPFRKRKERVKREEVDRRVKED----QEEYSEKFSED  231 (285)
T ss_pred             ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHh--CCCCCCCCCcchhHHHHHHHhhcc----cccCCccCCHH
Confidence                           223467889999999999999999  678998765433222222211111    23345668899


Q ss_pred             HHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      +.+|+.+||+.+|.+||+     +++++++
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         232 AKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            999999999999999997     7888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=3.8e-26  Score=182.23  Aligned_cols=169  Identities=28%  Similarity=0.560  Sum_probs=134.2

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      .||+|+||.||+|.++... .+..||+|.+.        ..+.+|+.++++++|+||+++++++.. ...+++|||+ ++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~-~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~-~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRK-KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMA-SG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCC-CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeC-CC
Confidence            3899999999999875321 45679999883        447899999999999999999998854 4679999999 99


Q ss_pred             CCHHHHhhhC------------------------------Cccc------------------------------------
Q psy796          110 GDLVQHLNSA------------------------------DNLT------------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~------------------------------r~l~------------------------------------  123 (228)
                      ++|.+++...                              +||+                                    
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            9999998642                              2222                                    


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||++. |..||.+....+....+..+.       ..+.+..+++++.++
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~l  230 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSY-GQKPYKKMKGPEVMSFIEQGK-------RLDCPAECPPEMYAL  230 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcC-CCCCcCcCCHHHHHHHHHCCC-------CCCCCCCCCHHHHHH
Confidence                       1123456789999999999999964 468998887776665554332       344567789999999


Q ss_pred             HHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+||+.+|++||++.+|.+.|+.+
T Consensus       231 i~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         231 MKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=8.2e-27  Score=192.13  Aligned_cols=163  Identities=20%  Similarity=0.342  Sum_probs=134.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      ++||+|+||.||++....   +++.||+|+++          ..+.+|+.++..++|+||+++++++...+..+++|||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   77 (323)
T cd05571           1 KLLGKGTFGKVILVREKA---TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCC
Confidence            368999999999998865   78899999884          23567899999999999999999999999999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       ++|+|.+++...                             +||+                                  
T Consensus        78 -~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~  156 (323)
T cd05571          78 -NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC  156 (323)
T ss_pred             -CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccccee
Confidence             999998887654                             3333                                  


Q ss_pred             ----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHH
Q psy796          124 ----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLM  193 (228)
Q Consensus       124 ----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  193 (228)
                                .....++.++|||||||++|||++  |..||...+.......+...        ....|..++.++.+++
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~Pf~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~li  226 (323)
T cd05571         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHEKLFELILME--------EIRFPRTLSPEAKSLL  226 (323)
T ss_pred             cCccccChhhhcCCCCCccccCcccchhhhhhhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHHH
Confidence                      234457889999999999999999  67899887776665554432        2345677899999999


Q ss_pred             HHhhccCCCCCC-----CHHHHHHH
Q psy796          194 CDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       194 ~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .+||+.||++||     ++.+++++
T Consensus       227 ~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         227 AGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             HHHccCCHHHcCCCCCCCHHHHHcC
Confidence            999999999999     79998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.95  E-value=2.4e-26  Score=190.20  Aligned_cols=181  Identities=18%  Similarity=0.249  Sum_probs=135.7

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++..++|++.+.||+|+||.||++....   .+..+|+|.++        ..+.+|++++.+++|+||+++++++..++.
T Consensus         1 ~l~~~~y~~~~~lg~g~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   77 (333)
T cd06650           1 ELKDDDFEKISELGAGNGGVVFKVSHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE   77 (333)
T ss_pred             CcchhhhheeccccCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCE
Confidence            4567889999999999999999998865   67889999763        457899999999999999999999999889


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++|+|.+++...                              +||+                         
T Consensus        78 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  156 (333)
T cd06650          78 ISICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (333)
T ss_pred             EEEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence            99999999 999999987543                              2222                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC------------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE------------  174 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------  174 (228)
                                       ..+..++.++|||||||++|||++  |..||......+....+........            
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (333)
T cd06650         157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAI--GRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP  234 (333)
T ss_pred             hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence                             223457888999999999999999  5678875544333211110000000            


Q ss_pred             -------------------------ccccCCC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 -------------------------LQVFLPK-PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 -------------------------~~~~~~~-~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                               ....... ....+.++++|+.+||+.+|++|||+.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence                                     0000001 12356789999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0578|consensus

Probab=99.95  E-value=1.8e-27  Score=198.89  Aligned_cols=174  Identities=20%  Similarity=0.352  Sum_probs=147.2

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++..|.....||+|.-|.||.+.-..   .+..||||.+.       +-+.+|+.+|+..+|+|||+++..+.-.+.+|+
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~---~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV  347 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKIS---TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV  347 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeecc---CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence            34556667899999999999998876   77889999993       557899999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC----------------------------Cccc------------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA----------------------------DNLT------------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~----------------------------r~l~------------------------------  123 (228)
                      ||||+ ++|+|.|.+...                            |||+                              
T Consensus       348 VMEym-~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  348 VMEYM-EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             EEeec-CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            99999 999998866433                            5555                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    .....|++|+||||||++.+||+-  |++||...++......+...-     .+.+..+..++.++
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve--GEPPYlnE~PlrAlyLIa~ng-----~P~lk~~~klS~~~  499 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLRALYLIATNG-----TPKLKNPEKLSPEL  499 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhc--CCCCccCCChHHHHHHHhhcC-----CCCcCCccccCHHH
Confidence                          556689999999999999999999  789998777777666665432     22455678899999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++.+||+.|+++|+++.++++|
T Consensus       500 kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  500 KDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHhhcchhcCCCHHHHhcC
Confidence            999999999999999999999974

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=1.8e-26  Score=186.33  Aligned_cols=180  Identities=32%  Similarity=0.547  Sum_probs=143.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.-+++.+.+.||+|+||.||+|.....  ...+..||+|.++        ..+.+|+.++..++|+||+++++++...+
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   81 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence            3445678889999999999999987532  1145789999984        34778999999999999999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---------  123 (228)
                      ..++++||+ ++++|.+++...                                             +|++         
T Consensus        82 ~~~~~~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          82 PLSMIFSYC-SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             ceEEEEEcC-CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence            899999999 999998887411                                             2222         


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .....++.++||||||+++|||+++ +..||.+....+....+
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Confidence                                                 1224567789999999999999986 46788887776666655


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ....       ..+.+..++.++.+++.+||+.+|.+||++.+|++.|+.
T Consensus       240 ~~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         240 RNRQ-------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HcCC-------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            4432       233467789999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0589|consensus

Probab=99.95  E-value=3.6e-27  Score=195.09  Aligned_cols=171  Identities=20%  Similarity=0.376  Sum_probs=150.3

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC-C
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQP-P   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~-~   99 (228)
                      .++|..++++|+|+||.++..+++.   .+..+++|.+.         ....+|+.++++++|||||.+.+.|..++. .
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~---~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKS---DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhcc---CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceE
Confidence            4578889999999999999998876   77899999993         457889999999999999999999998887 8


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +|+|+|| +||++.+.+.+.                               |||+                         
T Consensus        80 ~Ivm~Y~-eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   80 CIVMEYC-EGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EEEEeec-CCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            9999999 999999877644                               4444                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         ..+..|+.|+|||||||++|||++  -+++|...+...+...+..+.       ..+.|..
T Consensus       159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~--lk~aF~a~~m~~Li~ki~~~~-------~~Plp~~  229 (426)
T KOG0589|consen  159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCT--LKPAFKASNMSELILKINRGL-------YSPLPSM  229 (426)
T ss_pred             chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHh--cccccCccchHHHHHHHhhcc-------CCCCCcc
Confidence                               667789999999999999999999  468999999888888887764       3567888


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+.+++.++..|++.+|+.||++.+++.+
T Consensus       230 ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  230 YSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            99999999999999999999999999974

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=3.8e-26  Score=181.46  Aligned_cols=169  Identities=21%  Similarity=0.379  Sum_probs=136.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|.+.+.||+|+||.||++....   ++..|++|.+.         ..+.+|+++++.++|+|++++++++...+..+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKA---DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcC---CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEE
Confidence            46788999999999999999875   67899999873         4477899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++...                               ++++                            
T Consensus        78 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          78 MEYA-ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             EEeC-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            9999 999999988653                               1111                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++|+||||++++||++  |..||...+.......+....       ..+.+..++.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  227 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT--GKHPFDANNQGALILKIIRGV-------FPPVSQMYSQ  227 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHcCC-------CCCCccccCH
Confidence                            122345789999999999999999  678998777655544443321       1223446788


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|++||++.+++++
T Consensus       228 ~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         228 QLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHhhC
Confidence            99999999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=6.7e-26  Score=183.74  Aligned_cols=177  Identities=30%  Similarity=0.621  Sum_probs=140.9

Q ss_pred             CceeeeeecccceeeEEEEEEeccCC--CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIEL--DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~--~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|.+.+.||+|+||.||+|.......  ....+++|.+.        ..+.+|+.++..++|+||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            36778999999999999998754221  23578898773        357789999999999999999999998889999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------------------------------Cccc-----
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------------------------------DNLT-----  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------------------------------r~l~-----  123 (228)
                      ++||+ .+|+|.+++...                                                     +|++     
T Consensus        81 v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil  159 (290)
T cd05045          81 IVEYA-KYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL  159 (290)
T ss_pred             EEEec-CCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence            99999 999999887531                                                     1111     


Q ss_pred             -----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH
Q psy796          124 -----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV  162 (228)
Q Consensus       124 -----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~  162 (228)
                                                               .....++.++||||||++++||+++ |..||.+.....+
T Consensus       160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~  238 (290)
T cd05045         160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL-GGNPYPGIAPERL  238 (290)
T ss_pred             EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhc-CCCCCCCCCHHHH
Confidence                                                     1122357789999999999999985 3588988777766


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...+....       ..+.+..++.++.+++.+||+.+|.+||++.+++..|+++
T Consensus       239 ~~~~~~~~-------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         239 FNLLKTGY-------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHHhCCC-------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            65554322       2344667889999999999999999999999999999988

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.94  E-value=5.2e-26  Score=180.28  Aligned_cols=166  Identities=36%  Similarity=0.707  Sum_probs=133.9

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ++||+|+||.||+|...    ++..+|+|.++        ..+.+|++++..++|+||+++++++...+..+++|||+ +
T Consensus         1 ~~ig~g~~g~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~   75 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELV-P   75 (250)
T ss_pred             CccCCCCCceEEEEEec----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECC-C
Confidence            36899999999999864    67889999873        34778999999999999999999999888999999999 9


Q ss_pred             cCCHHHHhhhC------------------------------Cccc-----------------------------------
Q psy796          109 LGDLVQHLNSA------------------------------DNLT-----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~------------------------------r~l~-----------------------------------  123 (228)
                      +++|.+++...                              +|++                                   
T Consensus        76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (250)
T cd05085          76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ  155 (250)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence            99999988642                              1222                                   


Q ss_pred             ----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHH
Q psy796          124 ----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLM  193 (228)
Q Consensus       124 ----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  193 (228)
                                .....++.++||||||+++||+++. +..||.+.........+....       ....+..++.++.+++
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li  227 (250)
T cd05085         156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSL-GVCPYPGMTNQQAREQVEKGY-------RMSCPQKCPDDVYKVM  227 (250)
T ss_pred             CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHcCC-------CCCCCCCCCHHHHHHH
Confidence                      1223457789999999999999985 467998877666555554321       2334566889999999


Q ss_pred             HHhhccCCCCCCCHHHHHHHHH
Q psy796          194 CDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       194 ~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      .+||+.+|++||++.++++.|.
T Consensus       228 ~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         228 QRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHcccCcccCCCHHHHHHHhc
Confidence            9999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0605|consensus

Probab=99.94  E-value=2.7e-26  Score=190.79  Aligned_cols=175  Identities=18%  Similarity=0.246  Sum_probs=147.9

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.-++|++..+||+|+||.||+++-+.   ++..+|+|+++          +.+..|-.+|....++.||+++-.|++.
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~---Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~  213 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKD---TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK  213 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEcc---CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence            5577889999999999999999999987   89999999995          3457788999999999999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +.+||||||. +||++...|.+.                             |||+                        
T Consensus       214 ~~LYLiMEyl-PGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  214 EYLYLIMEYL-PGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             CeeEEEEEec-CCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence            9999999999 999998877654                             4444                        


Q ss_pred             -------------------------------------------------------------------cccCCCCCccchH
Q psy796          124 -------------------------------------------------------------------RDRDRYTCQSNVW  136 (228)
Q Consensus       124 -------------------------------------------------------------------~~~~~~~~~~Dv~  136 (228)
                                                                                         +.+..|+..+|.|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence                                                                               5566799999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC---HHHHHH
Q psy796          137 SFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT---FKQIYS  212 (228)
Q Consensus       137 s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps---~~~v~~  212 (228)
                      |+|||+|||+.  |.+||.+.++.+++.++......-    ..|....++.+.++||.+|+. ||++|..   ++||.+
T Consensus       373 SLG~ImyEmLv--GyPPF~s~tp~~T~rkI~nwr~~l----~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  373 SLGCIMYEMLV--GYPPFCSETPQETYRKIVNWRETL----KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             HHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhhhc----cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            99999999999  789999999999998887754321    233345578999999999999 9999965   555443

>KOG0611|consensus

Probab=99.94  E-value=3.1e-27  Score=191.09  Aligned_cols=169  Identities=24%  Similarity=0.395  Sum_probs=144.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH----------HHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------SLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      ..+|++.+.||+|.||+|-++..+.   .++.||||.++++          +.+|+++++.++||||+.++.+|.+.+.+
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~---sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI  128 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHK---SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI  128 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhcc---CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence            3568889999999999999998876   7899999999622          68999999999999999999999999999


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      .|||||. .+|.|++|+...                             |||+                           
T Consensus       129 vivMEYa-S~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k  207 (668)
T KOG0611|consen  129 VIVMEYA-SGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK  207 (668)
T ss_pred             EEEEEec-CCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence            9999999 999999999765                             4444                           


Q ss_pred             ----------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 ----------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 ----------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                      ..+.+| .+.+|.||+||++|-|+.  |..||++.+...+...+.++.+.        .| ..+
T Consensus       208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVy--GtMPFDG~Dhk~lvrQIs~GaYr--------EP-~~P  276 (668)
T KOG0611|consen  208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVY--GTMPFDGRDHKRLVRQISRGAYR--------EP-ETP  276 (668)
T ss_pred             HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhh--cccccCCchHHHHHHHhhccccc--------CC-CCC
Confidence                            334444 489999999999999999  67999999999999888876532        12 234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+...||.+++..+|++|.|+.+|..|
T Consensus       277 SdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  277 SDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             chHHHHHHHHHhcCcccchhHHHHhhh
Confidence            567889999999999999999999875

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.94  E-value=3.1e-26  Score=182.14  Aligned_cols=174  Identities=30%  Similarity=0.596  Sum_probs=140.2

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++-+++++.+.||+|+||.||.+..     .+..|++|.++     ..+.+|+.++..++|+|++++++++..+ ..+++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           3 LNLQKLTLGEIIGEGEFGAVLQGEY-----TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             ccHHHceeeeeeccCCCCceEeccc-----CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEE
Confidence            4556789999999999999999875     67789999884     4578899999999999999999998665 47999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++...                               +|++                            
T Consensus        77 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~  155 (254)
T cd05083          77 MELM-SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD  155 (254)
T ss_pred             EECC-CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence            9999 999999988643                               2222                            


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++|+||||++++||+++ +..||...+..+....+....       .+..+..++.++.
T Consensus       156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  227 (254)
T cd05083         156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSY-GRAPYPKMSLKEVKECVEKGY-------RMEPPEGCPADVY  227 (254)
T ss_pred             CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhC-CCCCCccCCHHHHHHHHhCCC-------CCCCCCcCCHHHH
Confidence                         2234677889999999999999985 468898877766555443321       2334567889999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      +++.+||+.+|++||++.+++..|+.
T Consensus       228 ~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         228 VLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=6.8e-26  Score=182.14  Aligned_cols=180  Identities=32%  Similarity=0.674  Sum_probs=142.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +++++|...+.||+|+||.||+|+.....  .....|++|.+.        ..+.+|++++.+++|+||+++++++...+
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   81 (275)
T cd05046           2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE   81 (275)
T ss_pred             CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence            56688999999999999999999986422  145779999883        35788999999999999999999998888


Q ss_pred             CCeEEEeeccccCCHHHHhhhCC--------------------------------------ccc----------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSAD--------------------------------------NLT----------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~r--------------------------------------~l~----------------  123 (228)
                      ..+++|||+ ++|+|.+++...+                                      |++                
T Consensus        82 ~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~  160 (275)
T cd05046          82 PHYMILEYT-DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL  160 (275)
T ss_pred             cceEEEEec-CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence            899999999 9999999986432                                      111                


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                   ......+.++||||||+++++|+++ +..||.................   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~-~~~p~~~~~~~~~~~~~~~~~~---  236 (275)
T cd05046         161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ-GELPFYGLSDEEVLNRLQAGKL---  236 (275)
T ss_pred             cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCCccccchHHHHHHHHcCCc---
Confidence                                         1123356779999999999999986 4678877666655554432211   


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                         ..+.+..++..+.+++.+||+.+|.+||++.+++..|+
T Consensus       237 ---~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         237 ---ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence               12335568899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=9.2e-26  Score=182.10  Aligned_cols=181  Identities=31%  Similarity=0.513  Sum_probs=138.5

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +...+|++.+.||+|+||.||+|.+..... ....+++|.+.        .++..|+..+..+.|+||++++|++.. ..
T Consensus         4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~   82 (279)
T cd05111           4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS   82 (279)
T ss_pred             CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence            455678889999999999999999854110 12358888873        335667778889999999999998754 45


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++++||+ ++|+|.+++...                              +|++                         
T Consensus        83 ~~~i~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          83 LQLVTQLS-PLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             cEEEEEeC-CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            78999999 999999998643                              2222                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++. |..||.+.........+..+.       ..+.+
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~  233 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY-GAEPYAGMRPHEVPDLLEKGE-------RLAQP  233 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHCCC-------cCCCC
Confidence                                 1234567889999999999999985 468888877665554443221       23345


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..++.++.+++.+||..+|++|||+.++++.|..+.
T Consensus       234 ~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         234 QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            567889999999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=9.8e-26  Score=181.75  Aligned_cols=180  Identities=26%  Similarity=0.482  Sum_probs=141.5

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +..+++++.+.||+|+||.||+|.+..... ....||+|.++        ..+.+|+.++..+.|+||+++++++... .
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~   82 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T   82 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence            456778999999999999999998764111 12358999873        4577899999999999999999998654 5


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++++||+ ++|+|.+++...                              +||+                         
T Consensus        83 ~~l~~~~~-~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          83 VQLVTQLM-PYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             cEEEEEcC-CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            78999999 999999998653                              2222                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++. +..||...........+....       ..+.+
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~  233 (279)
T cd05109         162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTF-GAKPYDGIPAREIPDLLEKGE-------RLPQP  233 (279)
T ss_pred             ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHCCC-------cCCCC
Confidence                                 2233467789999999999999985 468888776666555444321       23445


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..++.++.+++.+||+.+|++||++.+++..|+.+
T Consensus       234 ~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~  268 (279)
T cd05109         234 PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM  268 (279)
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            67889999999999999999999999999999988

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=7.6e-26  Score=181.03  Aligned_cols=174  Identities=21%  Similarity=0.370  Sum_probs=135.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.++          ..+.+|+++++.++|+|++++++++...+..+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLL---DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELN   78 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeC---CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEE
Confidence            468889999999999999999876   67899999662          34788999999999999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------r~l~------------------------  123 (228)
                      +++||+ ++|+|.+++...                                 +||+                        
T Consensus        79 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          79 IVLELA-DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEec-CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            999999 999998877421                                 2222                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh--HHHHHHHHHhhhCCCccccCC-
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN--EQVIQNAEHMYYGGELQVFLP-  180 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-  180 (228)
                                          .....++.++|+||||+++|||++  +..||.....  ......+....       ..+ 
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~p~~~~~~~~~~~~~~~~~~~-------~~~~  228 (267)
T cd08228         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLFSLCQKIEQCD-------YPPL  228 (267)
T ss_pred             chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhc--CCCCCccccccHHHHHHHHhcCC-------CCCC
Confidence                                223456788999999999999999  4567654322  23333332111       111 


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1235678899999999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0694|consensus

Probab=99.94  E-value=1.1e-26  Score=197.96  Aligned_cols=167  Identities=23%  Similarity=0.420  Sum_probs=144.6

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeeeeeeC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILGVCTG   95 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g~~~~   95 (228)
                      .+.-++|.+..+||+|+||+|+++..+.   ++..+|||.++          +..+.|.+++... +||.+++++.+|+.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~---~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT  440 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKG---TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT  440 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcC---CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc
Confidence            5667789999999999999999999987   78899999996          3357788887766 59999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------------  123 (228)
                      ++.+++||||+ .||++..+.+..                            ||||                        
T Consensus       441 ~~~l~fvmey~-~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m  519 (694)
T KOG0694|consen  441 KEHLFFVMEYV-AGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM  519 (694)
T ss_pred             CCeEEEEEEec-CCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence            99999999999 999975544422                            6666                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          +.+..|+.++|.|||||++|||+.  |..||.+.+-.++...|..-        ....|.
T Consensus       520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~--Gq~PF~gddEee~FdsI~~d--------~~~yP~  589 (694)
T KOG0694|consen  520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV--GESPFPGDDEEEVFDSIVND--------EVRYPR  589 (694)
T ss_pred             CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHhcC--------CCCCCC
Confidence                                778899999999999999999999  78999999999998888653        345688


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~  207 (228)
                      .++.|..+|+.+.+..+|+.|..+
T Consensus       590 ~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  590 FLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             cccHHHHHHHHHHhccCcccccCC
Confidence            899999999999999999999765

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.2e-25  Score=181.23  Aligned_cols=183  Identities=26%  Similarity=0.483  Sum_probs=145.8

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .+...++++.+.||+|+||.||+|.+..... ....+++|.++        ..+.+|+..+.+++|+|++++++++.. .
T Consensus         3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   81 (279)
T cd05057           3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S   81 (279)
T ss_pred             ccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence            4566788999999999999999998764211 23468999873        457789999999999999999999987 6


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                              +|++                        
T Consensus        82 ~~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          82 QVQLITQLM-PLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             ceEEEEecC-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            789999999 999999988653                              2222                        


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++|+||||++++|+++. +..||.+....++...+....       ..+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~  232 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTF-GAKPYEGIPAVEIPDLLEKGE-------RLPQ  232 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcC-CCCCCCCCCHHHHHHHHhCCC-------CCCC
Confidence                                  1123557789999999999999984 358898887776666554321       3445


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +..++.++.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       233 ~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         233 PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            66788999999999999999999999999999999843

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=185.44  Aligned_cols=174  Identities=21%  Similarity=0.374  Sum_probs=139.8

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.++|++.+.||+|+||.||++....   ++..|++|.++       ..+.+|+.++++++|+|++++++.+..+...++
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKE---TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcC---CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Confidence            45668889999999999999999865   67899999873       457889999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ ++++|.+++...                              +|++                            
T Consensus        80 v~e~~-~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          80 LIEFC-DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             Eeecc-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence            99999 999999987542                              1221                            


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++  |..||...+.......+....     .+....+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~  231 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQ--MEPPHHELNPMRVLLKILKSE-----PPTLDQP  231 (280)
T ss_pred             ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHh--CCCCcccCCHHHHHHHHhcCC-----CCCcCCc
Confidence                                 012335678999999999999999  668998777665554443221     1133345


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++.++.+++.+||+.+|.+||++.+++++
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            6788999999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=3.2e-26  Score=188.66  Aligned_cols=163  Identities=19%  Similarity=0.334  Sum_probs=133.6

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +.||+|+||.||++....   ++..||+|.++.          .+.+|+.++..++|+||+++++++...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~   77 (323)
T cd05595           1 KLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCC
Confidence            368999999999998765   788999998842          3467899999999999999999999888999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       ++|+|..++...                             +||+                                  
T Consensus        78 -~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  156 (323)
T cd05595          78 -NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC  156 (323)
T ss_pred             -CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccccc
Confidence             999998887654                             2333                                  


Q ss_pred             ----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHH
Q psy796          124 ----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLM  193 (228)
Q Consensus       124 ----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  193 (228)
                                .....++.++|||||||++|||++  |..||...+.......+...        ....|..++.++.+++
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~--g~~Pf~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~li  226 (323)
T cd05595         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHERLFELILME--------EIRFPRTLSPEAKSLL  226 (323)
T ss_pred             CCcCcCCcccccCCCCCchhchhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHHH
Confidence                      223456889999999999999999  67899887776665554332        2345667899999999


Q ss_pred             HHhhccCCCCCC-----CHHHHHHH
Q psy796          194 CDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       194 ~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .+||+.+|.+|+     ++.+++++
T Consensus       227 ~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         227 AGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             HHHccCCHHHhCCCCCCCHHHHHcC
Confidence            999999999998     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=1.9e-26  Score=184.55  Aligned_cols=177  Identities=16%  Similarity=0.270  Sum_probs=134.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +..+|++.+.||+|+||.||+|....   .+..||+|.+.       ..+.+|+.++.+++|+||+++++++...+..++
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLH---TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECC---CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence            45678999999999999999998865   67899999884       346789999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++++|.++++..                             +|++                             
T Consensus        84 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          84 CMEYC-GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             EEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence            99999 999999887543                             1122                             


Q ss_pred             ---------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ---------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ---------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                     .   ....++.++||||||++++||++  +..||...+.......+....   ...+....+..+
T Consensus       163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~--g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  237 (267)
T cd06646         163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE--LQPPMFDLHPMRALFLMSKSN---FQPPKLKDKTKW  237 (267)
T ss_pred             cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh--CCCCccccchhhhheeeecCC---CCCCCCcccccc
Confidence                           0   12335678999999999999999  557776554433222221110   001112223456


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      +.++.+++.+||+.+|++||++++++++|
T Consensus       238 ~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         238 SSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            88999999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=6e-26  Score=182.80  Aligned_cols=167  Identities=19%  Similarity=0.259  Sum_probs=126.9

Q ss_pred             eecccceeeEEEEEEecc---------------------CCCceeEEeecch-------HHHHHHHHHHhhCCCCCccee
Q psy796           38 RLGSCHLGEMMICETEDI---------------------ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSI   89 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~---------------------~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~   89 (228)
                      .||+|+||.||+|.+...                     ......|++|.+.       ..+.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            589999999999986421                     1123568999884       346788899999999999999


Q ss_pred             eeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------
Q psy796           90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------  123 (228)
Q Consensus        90 ~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------  123 (228)
                      +|++.+....++||||+ ++|+|..++...                              +||+                
T Consensus        82 ~~~~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~  160 (274)
T cd05076          82 HGVCVRGSENIMVEEFV-EHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS  160 (274)
T ss_pred             EEEEEeCCceEEEEecC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence            99999988899999999 999999888542                              2222                


Q ss_pred             -------------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 -------------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 -------------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                     . ....++.++||||||+++|||++. +..||......+.......   
T Consensus       161 ~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~---  236 (274)
T cd05076         161 PFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD-GEVPLKERTPSEKERFYEK---  236 (274)
T ss_pred             ceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCccccChHHHHHHHHh---
Confidence                                           0 113467889999999999999654 5688877665544332221   


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                            ....+...+.++.+++.+||+.+|++|||+.+|++.|+
T Consensus       237 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         237 ------KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ------ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence                  12233445678999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=4.2e-26  Score=187.90  Aligned_cols=166  Identities=19%  Similarity=0.285  Sum_probs=134.2

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++........++.||+|.++           ..+.+|+.++..++|+||+++++++..++..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            57999999999999875333367899999884           2346799999999999999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++.+.                             +||+                                 
T Consensus        82 ~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          82 L-SGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             C-CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            9 999999887543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||++  |..||...+.......+...        ....|..++.++.++
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--G~~pf~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l  230 (323)
T cd05584         161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLT--GAPPFTAENRKKTIDKILKG--------KLNLPPYLTPEARDL  230 (323)
T ss_pred             CCCccccChhhccCCCCCCcceecccHHHHHHHhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHH
Confidence                       223346788999999999999999  67999887776665555432        344567788999999


Q ss_pred             HHHhhccCCCCCC-----CHHHHHHH
Q psy796          193 MCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      +.+||+.+|++||     ++.+++.+
T Consensus       231 i~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         231 LKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            9999999999999     78888763

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3e-26  Score=187.87  Aligned_cols=161  Identities=24%  Similarity=0.341  Sum_probs=131.2

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   ++..||+|.++          ..+.+|+.++.+++|+||+++++++...+..+++|||+ +
T Consensus         1 lg~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRD---TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI-N   76 (312)
T ss_pred             CCcCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC-C
Confidence            6999999999998865   67899999884          23567999999999999999999999888999999999 9


Q ss_pred             cCCHHHHhhhC-----------------------------Cccc------------------------------------
Q psy796          109 LGDLVQHLNSA-----------------------------DNLT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-----------------------------r~l~------------------------------------  123 (228)
                      +|+|.+++...                             |||+                                    
T Consensus        77 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  156 (312)
T cd05585          77 GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGT  156 (312)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCC
Confidence            99999988654                             3333                                    


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD  195 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  195 (228)
                              ..+..++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.++.+++.+
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g~~pf~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~  226 (312)
T cd05585         157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT--GLPPFYDENVNEMYRKILQE--------PLRFPDGFDRDAKDLLIG  226 (312)
T ss_pred             cccCCHHHHcCCCCCCccceechhHHHHHHHh--CCCCcCCCCHHHHHHHHHcC--------CCCCCCcCCHHHHHHHHH
Confidence                    223356889999999999999999  67999887776665554432        344567789999999999


Q ss_pred             hhccCCCCCCC---HHHHHHH
Q psy796          196 CWKRDQTMRPT---FKQIYSF  213 (228)
Q Consensus       196 c~~~~p~~Rps---~~~v~~~  213 (228)
                      ||+.+|.+||+   +.+++.+
T Consensus       227 ~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         227 LLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HcCCCHHHcCCCCCHHHHHcC
Confidence            99999999975   6676653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.94  E-value=6.4e-26  Score=180.36  Aligned_cols=169  Identities=24%  Similarity=0.437  Sum_probs=136.9

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|++.+.||+|+||.||++....   ++..+++|.++        ..+.+|+.+++.++|+|++++++.+...+..+++|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   77 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN---SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM   77 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC---CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence            46788999999999999998865   67899999873        45778999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC-------------------------------Cccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------------  123 (228)
                      ||+ ++|+|.+++...                               ++++                             
T Consensus        78 e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          78 EYC-DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             eeC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence            999 999999887542                               1111                             


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++|+||||+++++|++  |..||...+.......+....       ..+.+..++..
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  227 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT--LKHPFQANSWKNLILKVCQGS-------YKPLPSHYSYE  227 (255)
T ss_pred             cccccCCccccCHHHHccCCcCchhhhhhhchhheehhh--ccCCCCCCCHHHHHHHHhcCC-------CCCCCcccCHH
Confidence                           122346788999999999999999  668998776665555443321       22345668889


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+++.+||+.+|.+||++.+++..
T Consensus       228 ~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         228 LRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHhCCcccCCCHHHHhhc
Confidence            9999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=1.9e-25  Score=178.51  Aligned_cols=175  Identities=21%  Similarity=0.380  Sum_probs=137.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .+|++.+.||+|+||.||+|....   .+..|++|.++          ..+.+|++++++++|+|++++++++...+..+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~   78 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLL---DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELN   78 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcC---CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            468889999999999999999875   67899999773          45788999999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------r~l~------------------------  123 (228)
                      ++|||+ ++++|.+++...                                 ++|+                        
T Consensus        79 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          79 IVLELA-DAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEecC-CCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            999999 999999887531                                 1222                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC--hHHHHHHHHHhhhCCCccccCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--NEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                          .....++.++||||||+++|+|++  +..||....  ..+....+....       ..+.
T Consensus       158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~-------~~~~  228 (267)
T cd08224         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLCKKIEKCD-------YPPL  228 (267)
T ss_pred             CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH--CCCCcccCCccHHHHHhhhhcCC-------CCCC
Confidence                                223346778999999999999999  557775432  223333332211       1222


Q ss_pred             CC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          182 PS-LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       182 ~~-~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +. .++.++.+++.+||..+|++|||+.+|++.|+.+.
T Consensus       229 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         229 PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            33 67889999999999999999999999999998873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG4717|consensus

Probab=99.94  E-value=6.1e-27  Score=194.25  Aligned_cols=166  Identities=23%  Similarity=0.393  Sum_probs=147.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |.+.++||+|.|+.|-++++.-   .|..||||++.         ..+++|++.++.++|||||++|.+.-....+|||+
T Consensus        20 YDLekTlG~GHFAVVKLArHVF---TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVF---TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhc---ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            6778999999999999998865   89999999994         55789999999999999999999998888999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      |.- .+|+|++|+-++                              |||+                              
T Consensus        97 ELG-D~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen   97 ELG-DGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             Eec-CCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh
Confidence            998 899999999765                              5555                              


Q ss_pred             --------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 --------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 --------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                    +.+..| .+++||||+||++|-|++  |.+||...+..+.+..++.+        +...|..++.+
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVC--Gq~PFqeANDSETLTmImDC--------KYtvPshvS~e  245 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC--GQPPFQEANDSETLTMIMDC--------KYTVPSHVSKE  245 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHh--CCCccccccchhhhhhhhcc--------cccCchhhhHH
Confidence                          233344 489999999999999999  78999999999999999887        45678999999


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +++||..|+..||.+|.+.++|+.
T Consensus       246 CrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  246 CRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHHHHHHhcCchhhccHHHHhc
Confidence            999999999999999999999875

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-25  Score=179.23  Aligned_cols=171  Identities=20%  Similarity=0.327  Sum_probs=135.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +++++.+.||+|++|.||.+....   .+..|++|.+.            ..+.+|++++.+++|+||+++++++..+..
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~---~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   78 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVD---TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDET   78 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcC---CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCe
Confidence            468889999999999999998765   67899999763            346789999999999999999999999889


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .++++||+ ++++|.+++...                             +|++                          
T Consensus        79 ~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~  157 (263)
T cd06625          79 LSIFMEYM-PGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI  157 (263)
T ss_pred             EEEEEEEC-CCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence            99999999 999999887543                             2222                          


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           ..+..++.++||||||+++|||++  |..||...+............      .....+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~  229 (263)
T cd06625         158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT--EKPPWAEFEAMAAIFKIATQP------TNPQLP  229 (263)
T ss_pred             ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh--CCCCccccchHHHHHHHhccC------CCCCCC
Confidence                                 111235678999999999999999  568887765554433332211      123346


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++.++.+++.+||..+|.+|||+.+++++
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         230 SHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            6788999999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=1e-25  Score=185.66  Aligned_cols=167  Identities=25%  Similarity=0.432  Sum_probs=132.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHH---hhCCCCCcceeeeeeeCCCCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFL---SSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l---~~l~h~niv~~~g~~~~~~~~   99 (228)
                      |++.+.||+|+||.||++....   .+..||+|.++          ..+.+|+.++   ..++|+||+++++++...+..
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~   77 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHV   77 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEE
Confidence            4678899999999999998865   68899999984          2245565554   466899999999999998899


Q ss_pred             eEEEeeccccCCHHHHhhhC----------------------------Cccc----------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA----------------------------DNLT----------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~----------------------------r~l~----------------------------  123 (228)
                      +++|||+ ++|+|..++...                            +||+                            
T Consensus        78 ~lv~E~~-~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          78 CFVMEYA-AGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EEEEcCC-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence            9999999 999998877543                            3333                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ..+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..++.
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--G~~pf~~~~~~~~~~~i~~~--------~~~~p~~~~~  226 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV--GESPFPGDDEEEVFDSIVND--------EVRYPRFLSR  226 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCCCCCH
Confidence                            223456788999999999999999  67999887777666555432        2335667899


Q ss_pred             HHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+||     ++.+++++
T Consensus       227 ~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         227 EAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             HHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            999999999999999999     57777664

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=9.5e-26  Score=194.97  Aligned_cols=169  Identities=20%  Similarity=0.349  Sum_probs=137.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      .|.+.+.||+|+||.||.+.....  .+..|++|.+.       ..+.+|+.++..++|+||+++++++...+..++|||
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~--~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSD--PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCC--CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            478899999999999999987541  26788888762       346789999999999999999999999999999999


Q ss_pred             eccccCCHHHHhhhC---------------------------------Cccc----------------------------
Q psy796          105 YPAQLGDLVQHLNSA---------------------------------DNLT----------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~---------------------------------r~l~----------------------------  123 (228)
                      |+ ++|+|.++|...                                 |||+                            
T Consensus       146 ~~-~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        146 YG-SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CC-CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            99 999998877431                                 3343                            


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++|||||||++|||++  |..||...+..+....+....       ..+.+..+
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~Pf~~~~~~~~~~~~~~~~-------~~~~~~~~  295 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT--LHRPFKGPSQREIMQQVLYGK-------YDPFPCPV  295 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCC-------CCCCCccC
Confidence                              223457889999999999999999  668998877766665554332       22345678


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +.++.+++.+||+.+|++||++.+++.
T Consensus       296 s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        296 SSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            899999999999999999999999875

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1e-25  Score=182.41  Aligned_cols=172  Identities=17%  Similarity=0.262  Sum_probs=134.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|+..++||+|+||.||++....   +++.||+|.+.          ..+.+|+.+++.++|+||+++++.+...+..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcC---CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEE
Confidence            46788999999999999998765   67899999884          235679999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ ++|+|.+++...                               +||+                           
T Consensus        78 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          78 VLTLM-NGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             EEecc-CCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            99999 999998877432                               2222                           


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||++  |..||.+.+.......+.......    ....+..++.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  230 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE--GKSPFRQRKEKVKREEVERRVKED----QEEYSEKFSE  230 (285)
T ss_pred             ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH--CCCCCCCCchhhHHHHHHHHhhhc----ccccCcccCH
Confidence                            122446788999999999999999  678998766543333332221111    2234556889


Q ss_pred             HHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .+.+++.+||+.||.+||     ++.+++++
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            999999999999999999     88898764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=1.8e-25  Score=193.70  Aligned_cols=174  Identities=20%  Similarity=0.303  Sum_probs=138.9

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .....+|.+.+.||+|+||.||++....   +++.||+|.+.         ..+.+|+.++..++|+|++++++.+....
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVS---DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            3445789999999999999999998765   78899999883         34678999999999999999887765332


Q ss_pred             --------CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc-------------
Q psy796           98 --------PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT-------------  123 (228)
Q Consensus        98 --------~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~-------------  123 (228)
                              ..+++|||+ ++|+|.+++...                                 +||+             
T Consensus       105 ~~~~~~~~~i~lV~Ey~-~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        105 PRNPENVLMIALVLDYA-NAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             ccCcccceEEEEEEeCC-CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence                    257999999 999999887532                                 3333             


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                       .....++.++||||||+++|||++  |..||.+.+.......+....
T Consensus       184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt--G~~Pf~~~~~~~~~~~~~~~~  261 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT--LKRPFDGENMEEVMHKTLAGR  261 (496)
T ss_pred             EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHhcCC
Confidence                                             123457889999999999999999  668998877766655544322


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                             ..+.|..++.++.+++.+||+.+|.+||++.+++++
T Consensus       262 -------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        262 -------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             -------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence                   234567789999999999999999999999999874

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.94  E-value=1.2e-25  Score=181.86  Aligned_cols=176  Identities=20%  Similarity=0.287  Sum_probs=131.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||++....   .+..||+|.++         ..+.+|+.++..++|+||+++++++...+..+++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKE---TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV   78 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECC---CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence            57889999999999999999875   67899999874         3467899999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||+ +++.+..+....                             +||+                              
T Consensus        79 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          79 FEYV-EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             EecC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence            9999 876655443221                             2222                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC-----------C-Cc-
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG-----------G-EL-  175 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-----------~-~~-  175 (228)
                                     ..+..++.++|||||||++|||++  |..||.+.+..+....+......           . .. 
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSD--GQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH  235 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence                           223457889999999999999999  66899877654433332221100           0 00 


Q ss_pred             cccCCC-----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPK-----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~-----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+.           ...++.++.+++.+||+.+|++|||++++++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            000000           12367889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=2.8e-25  Score=179.43  Aligned_cols=181  Identities=29%  Similarity=0.546  Sum_probs=132.2

Q ss_pred             CceeeeeecccceeeEEEEEEecc-CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~  100 (228)
                      .+.+.+.||+|+||.||++.+... ...+..||+|.++        ..+.+|++++++++|+||+++++++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ   84 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence            357889999999999998775421 1256789999884        3467899999999999999999987654  3578


Q ss_pred             EEEeeccccCCHHHHhhhC----------------------------Cccc-----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------------------  123 (228)
                      ++|||+ ++++|.+++...                            +||+                             
T Consensus        85 lv~e~~-~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          85 LIMEYV-PLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             EEecCC-CCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence            999999 999999987653                            2222                             


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH--HHH---------HHHHHhhhCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE--QVI---------QNAEHMYYGGE  174 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~--~~~---------~~~~~~~~~~~  174 (228)
                                        .....++.++||||||++++||++|  ..||......  +..         ..+......  
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH--CDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER--  239 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC--CCCCCCCcchhhhhhcccccccchhhhhhhhhc--
Confidence                              1124467889999999999999994  4666432211  000         000000000  


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                       ....+.+..++.++.+++.+||+.+|++|||++++++.|+.+.
T Consensus       240 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         240 -GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence             1122345678899999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=2.2e-25  Score=180.69  Aligned_cols=177  Identities=19%  Similarity=0.266  Sum_probs=135.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .++|++.+.||+|+||.||+|....   ++..||+|.++        ..+.+|++++++++|+||+++++++......++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECC---CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            3568889999999999999998765   67899999874        346789999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + |+|.+++...                              +||+                            
T Consensus        81 v~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          81 VFEYL-D-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             EEeCC-C-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            99999 7 6888877542                              2333                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                       .....++.++||||+||++|||++  |..||.+.+..+....+.........           
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT--GRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE  236 (288)
T ss_pred             cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence                             122457889999999999999999  66899887766554444332110000           


Q ss_pred             -c-ccC---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -Q-VFL---------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~-~~~---------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       . ...         .....++.+..+++.+|++.||.+|||+.++++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence             0 000         0113467889999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=2.2e-25  Score=178.96  Aligned_cols=171  Identities=30%  Similarity=0.610  Sum_probs=134.1

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      ++||+|+||.||+|...... ....+++|.++        ..+.+|++++.++ +|+||+++++++...+..+++|||+ 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~-   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA-   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC-
Confidence            36899999999999886410 12457888774        3467899999999 7999999999999888899999999 


Q ss_pred             ccCCHHHHhhhC---------------------------------------------Cccc-------------------
Q psy796          108 QLGDLVQHLNSA---------------------------------------------DNLT-------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~---------------------------------------------r~l~-------------------  123 (228)
                      ++|+|.+++...                                             +|++                   
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            999999988532                                             1222                   


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++||||||++++||+++ +..||.+.+..+....+....       ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~-g~~pf~~~~~~~~~~~~~~~~-------~~  230 (270)
T cd05047         159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGY-------RL  230 (270)
T ss_pred             ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcC-CCCCccccCHHHHHHHHhCCC-------CC
Confidence                                    1233467789999999999999974 468898777666555443221       23


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         231 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            34556789999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0198|consensus

Probab=99.94  E-value=1.2e-26  Score=186.97  Aligned_cols=175  Identities=22%  Similarity=0.336  Sum_probs=136.9

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH-------HHHHHHHHhhCCCCCcceeeeeeeCCC--CCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD-------SLREIRFLSSLQDPNLVSILGVCTGEQ--PPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~-------~~~e~~~l~~l~h~niv~~~g~~~~~~--~~~  100 (228)
                      ..+....+.||+|+||.||++...+   ++...|||.+...       +.+|+.+|.+++|+|||+++|.....+  ..+
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~---~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~   92 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKK---TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN   92 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecC---CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence            4557778999999999999999875   5899999999533       789999999999999999999854444  578


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      +.|||+ ++|+|.+++.+.                              +||+                           
T Consensus        93 i~mEy~-~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   93 IFMEYA-PGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             eeeecc-CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            999999 999999988764                              2222                           


Q ss_pred             ---------------------cccC-CCCCccchHHHHHHHHHHHhcCCCCCCCCC-ChHHHHHHHHHhhhCCCccccCC
Q psy796          124 ---------------------RDRD-RYTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ---------------------~~~~-~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                           ...+ ....++|||||||++.||+|  |.+||... ......-.+....      ..+.
T Consensus       172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T--g~~PW~~~~~~~~~~~~ig~~~------~~P~  243 (313)
T KOG0198|consen  172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT--GKPPWSEFFEEAEALLLIGRED------SLPE  243 (313)
T ss_pred             cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC--CCCcchhhcchHHHHHHHhccC------CCCC
Confidence                                 1111 12249999999999999999  67999873 3333333333221      1235


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .|..++.+.++++.+|++.+|+.|||+++++.|--.
T Consensus       244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            577899999999999999999999999999986543

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=7.4e-26  Score=186.87  Aligned_cols=163  Identities=21%  Similarity=0.334  Sum_probs=133.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +.||+|+||.||++....   .+..||+|+++          ..+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~   77 (328)
T cd05593           1 KLLGKGTFGKVILVREKA---SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYV   77 (328)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCC
Confidence            368999999999998865   78899999884          23567899999999999999999999988999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       ++|+|.+++...                             +||+                                  
T Consensus        78 -~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~  156 (328)
T cd05593          78 -NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFC  156 (328)
T ss_pred             -CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccccc
Confidence             999998887544                             2333                                  


Q ss_pred             ----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHH
Q psy796          124 ----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLM  193 (228)
Q Consensus       124 ----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  193 (228)
                                .....++.++|||||||++|||++  |..||...+.......+...        ....|..++.++.+++
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--G~~Pf~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~li  226 (328)
T cd05593         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHEKLFELILME--------DIKFPRTLSADAKSLL  226 (328)
T ss_pred             CCcCccChhhhcCCCCCccCCccccchHHHHHhh--CCCCCCCCCHHHHHHHhccC--------CccCCCCCCHHHHHHH
Confidence                      223456889999999999999999  67899877766655544321        3345677899999999


Q ss_pred             HHhhccCCCCCC-----CHHHHHHH
Q psy796          194 CDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       194 ~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .+||+.+|.+|+     ++.+++++
T Consensus       227 ~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         227 SGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            999999999997     89999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=8.3e-26  Score=179.52  Aligned_cols=174  Identities=20%  Similarity=0.397  Sum_probs=137.6

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.++|++.+.||+|+||.||+|....   ++..+++|.+.     ..+.+|++++++++|+|++++++.+......++++
T Consensus         1 ~~~~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~   77 (256)
T cd06612           1 PEEVFDILEKLGEGSYGSVYKAIHKE---TGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM   77 (256)
T ss_pred             CcccchhhhhhcCCCCeEEEEEEEcC---CCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence            35678899999999999999999875   57899999885     45889999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ ++++|.+++...                              ++++                              
T Consensus        78 e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  156 (256)
T cd06612          78 EYC-GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR  156 (256)
T ss_pred             ecC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence            999 999999988542                              1111                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    ..+..++.++||||||+++|+|++  +..||...+.......+...     .......+..++.++
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~--g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  229 (256)
T cd06612         157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE--GKPPYSDIHPMRAIFMIPNK-----PPPTLSDPEKWSPEF  229 (256)
T ss_pred             ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh--CCCCCCCcchhhhhhhhccC-----CCCCCCchhhcCHHH
Confidence                          223356788999999999999999  56888766554333222111     111233455678899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.+|.+|||+.+++.+
T Consensus       230 ~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         230 NDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             HHHHHHHHhcChhhCcCHHHHhcC
Confidence            999999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0593|consensus

Probab=99.94  E-value=1.5e-26  Score=180.62  Aligned_cols=174  Identities=23%  Similarity=0.383  Sum_probs=135.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .|+....+|+|++|.||+++.+.   +++.||||.+.         +.-+||+++|++++|+|+|.++.+|.....++||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~---TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV   79 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKD---TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV   79 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCC---cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence            35666789999999999999987   89999999993         4468999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      +||| .. ++.+-|.+.                              ||++                             
T Consensus        80 FE~~-dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~  157 (396)
T KOG0593|consen   80 FEYC-DH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDN  157 (396)
T ss_pred             eeec-ch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcch
Confidence            9999 74 444433322                              5555                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------Cc-
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------EL-  175 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~-  175 (228)
                                      ....+|+..+||||.||++.||++  |.+-|++.+..+..-.++.....-           .. 
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~--G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F  235 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLT--GEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF  235 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhc--CCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence                            445689999999999999999999  678899988876665555432110           00 


Q ss_pred             -cccCCCC----------CCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          176 -QVFLPKP----------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       176 -~~~~~~~----------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                       ..++|.|          +.++.-+.+++..|++.||.+|++-++++.
T Consensus       236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence             1122222          234566889999999999999999999985

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=1.6e-25  Score=181.72  Aligned_cols=179  Identities=18%  Similarity=0.336  Sum_probs=139.1

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..+..+.+.|++.+.||+|+||.||+|....   .+..+++|.+.       ..+.+|+.+++.++|+|++++++.+..+
T Consensus         5 ~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   81 (292)
T cd06644           5 RRDLDPNEVWEIIGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD   81 (292)
T ss_pred             hcccCcchhhhhhheecCCCCeEEEEEEECC---CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC
Confidence            3455566789999999999999999998865   67899999984       4477899999999999999999999888


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ ++++|..++...                              +|++                       
T Consensus        82 ~~~~lv~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          82 GKLWIMIEFC-PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CeEEEEEecC-CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            8899999999 999998776432                              2222                       


Q ss_pred             ---------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 ---------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 ---------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                           .     ....++.++|||||||++|||++  +..||...+.......+....     .+
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~-----~~  233 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ--IEPPHHELNPMRVLLKIAKSE-----PP  233 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhc--CCCCCccccHHHHHHHHhcCC-----Cc
Confidence                                 0     12335678999999999999999  568887666544333332211     11


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+..++.++.+++.+||+.+|++||++.+++++
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            233456678899999999999999999999999863

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0577|consensus

Probab=99.94  E-value=2.7e-27  Score=198.95  Aligned_cols=188  Identities=22%  Similarity=0.339  Sum_probs=150.5

Q ss_pred             cCCCCCccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHh
Q psy796           10 ISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLS   79 (228)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~   79 (228)
                      .+-.++..+.+...++++   .-|.-.+.||.|+||.||.++...   +...||||.+.          .++.+|+.+|.
T Consensus         8 GslKDPeiA~LF~k~DPE---klf~dLrEIGHGSFGAVYfArd~~---n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~   81 (948)
T KOG0577|consen    8 GSLKDPEIADLFFKDDPE---KLFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLR   81 (948)
T ss_pred             CCCCCchHHHHHccCCHH---HHHHHHHHhcCCccceeEEeeccC---ccceeeeeeccccccccHHHHHHHHHHHHHHH
Confidence            344445555444444443   234445789999999999999877   88999999993          66889999999


Q ss_pred             hCCCCCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc------
Q psy796           80 SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------  123 (228)
Q Consensus        80 ~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------  123 (228)
                      +++|||++.+.|++..+.+-||||||| - |+-.|.|.-+                              ||++      
T Consensus        82 ~l~HPntieYkgCyLre~TaWLVMEYC-l-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL  159 (948)
T KOG0577|consen   82 QLRHPNTIEYKGCYLREHTAWLVMEYC-L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL  159 (948)
T ss_pred             hccCCCcccccceeeccchHHHHHHHH-h-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe
Confidence            999999999999999999999999999 5 7777765322                              4444      


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .+.+.|+-|+||||+|+++.||.-  +.+|+..++....+-+|
T Consensus       160 se~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE--RkPPlFnMNAMSALYHI  237 (948)
T KOG0577|consen  160 SEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHI  237 (948)
T ss_pred             cCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhh--cCCCccCchHHHHHHHH
Confidence                                                 778899999999999999999999  77999999988877777


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .....     +.+ ....+++.+.+++..|++.-|.+|||..+++.|
T Consensus       238 AQNes-----PtL-qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  238 AQNES-----PTL-QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             HhcCC-----CCC-CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            65321     011 234588999999999999999999999998874

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=5.5e-26  Score=181.30  Aligned_cols=168  Identities=24%  Similarity=0.405  Sum_probs=128.3

Q ss_pred             eeecccceeeEEEEEEeccCC----CceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIEL----DTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~----~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||+|.......    ....|++|.+.       +.+.+|+.+++.+.|+|++++++++......+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998753211    23458888874       4467889999999999999999999988889999999


Q ss_pred             ccccCCHHHHhhhC------------------------------Cccc--------------------------------
Q psy796          106 PAQLGDLVQHLNSA------------------------------DNLT--------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~------------------------------r~l~--------------------------------  123 (228)
                      + ++|+|.+++...                              +|++                                
T Consensus        81 ~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          81 V-KFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             C-CCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            9 999999998653                              2222                                


Q ss_pred             ----------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 ----------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 ----------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                      . ....++.++||||||+++|||++|+ ..||..............         ....|...+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  229 (258)
T cd05078         160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGG-DKPLSALDSQKKLQFYED---------RHQLPAPKW  229 (258)
T ss_pred             CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCC-CCChhhccHHHHHHHHHc---------cccCCCCCc
Confidence                            1 1134677899999999999999952 567766555443322211         223455567


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      .++.+++.+||+.+|++|||++++++.|+
T Consensus       230 ~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         230 TELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            88999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=3.2e-25  Score=176.40  Aligned_cols=169  Identities=19%  Similarity=0.410  Sum_probs=136.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .|++.+.||+|+||.+|.+....   +++.|++|.+.         ..+.+|+.++++++|+||+++++++...+..+++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKE---DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIV   77 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcC---CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEE
Confidence            36788999999999999998865   67899999873         3578899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      +||+ ++++|.+++...                               ++++                            
T Consensus        78 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          78 MDYC-EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             EecC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            9999 999999887542                               1111                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ..+...+.++|+||||+++++|++  |..||...+..+....+....       ..+.+..++.
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~--g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  227 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT--LKHAFEAGNMKNLVLKIIRGS-------YPPVSSHYSY  227 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHc--CCCCccCCCHHHHHHHHhcCC-------CCCCcccCCH
Confidence                            223456788999999999999999  568887766665554443321       2234567889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+||++.+|+++
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         228 DLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            99999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=2.9e-25  Score=176.44  Aligned_cols=169  Identities=20%  Similarity=0.350  Sum_probs=136.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|+..+.||+|+||.||++....   .+..+++|.+.         ..+.+|++++++++|+|++++++.+...+..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA---DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIV   77 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC---CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEE
Confidence            47788999999999999998865   77899999873         3578899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++...                               ++++                            
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          78 MEYA-PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             EecC-CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            9999 999999988653                               1111                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|+|++  +..||...+.......+....       ..+.+..++.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  227 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS--LKRAFEAANLPALVLKIMSGT-------FAPISDRYSP  227 (256)
T ss_pred             cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHh--CCCCcccCchHHHHHHHHhcC-------CCCCCCCcCH
Confidence                            122345788999999999999999  568888776665554443321       2234556889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+|||+.+++++
T Consensus       228 ~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         228 DLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhhC
Confidence            99999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=1.4e-25  Score=188.07  Aligned_cols=181  Identities=18%  Similarity=0.247  Sum_probs=144.3

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      .....+..++|++.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.+++.++|+||++++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~  111 (370)
T cd05596          35 ITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKS---SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYA  111 (370)
T ss_pred             hccCCCCHHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            34566777889999999999999999998865   68899999884          225679999999999999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc---------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT---------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~---------------------  123 (228)
                      +...+..+++|||+ ++|+|.+++...                            +||+                     
T Consensus       112 ~~~~~~~~lv~Ey~-~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~  190 (370)
T cd05596         112 FQDDKYLYMVMEYM-PGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (370)
T ss_pred             EecCCEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence            99988999999999 999999987653                            3333                     


Q ss_pred             ------------------------c----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ------------------------R----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ------------------------~----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                              .    ....++.++|||||||++|||++  |..||.+.+.......+.....    
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt--G~~Pf~~~~~~~~~~~i~~~~~----  264 (370)
T cd05596         191 KMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV--GDTPFYADSLVGTYSKIMDHKN----  264 (370)
T ss_pred             eccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh--CCCCcCCCCHHHHHHHHHcCCC----
Confidence                                    0    01236788999999999999999  6799988777666665543211    


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                      ....+....++.++.+++.+|++.+|.+  |+++.+++.+
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            1122333457899999999999999987  9999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0661|consensus

Probab=99.94  E-value=1.2e-26  Score=190.34  Aligned_cols=177  Identities=20%  Similarity=0.328  Sum_probs=140.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHHH--------HHHHHHHhhCC-CCCcceeeeeeeCCC-CC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQ-DPNLVSILGVCTGEQ-PP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~~--------~~e~~~l~~l~-h~niv~~~g~~~~~~-~~   99 (228)
                      .++|.+++.||.|+||.||+|+-..   .+..||||.++..|        .||+..|++++ |+||++++.++.++. .+
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~---~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKE---TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecC---CCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            4568888999999999999998876   77889999997553        68999999998 999999999998887 88


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      ++||||+ . .+|++.++++                              ||++                          
T Consensus        86 ~fVfE~M-d-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   86 YFVFEFM-D-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK  163 (538)
T ss_pred             eeeHHhh-h-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC
Confidence            9999999 6 8999988755                              5555                          


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----------  175 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------  175 (228)
                                        +....|+.+.||||+||+++|+.++  ++-|++.+-.+...++-........          
T Consensus       164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sL--rPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La  241 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSL--RPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA  241 (538)
T ss_pred             CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHh--cccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence                              6777899999999999999999996  4778887765544443322111000          


Q ss_pred             ---cccCCC---------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ---QVFLPK---------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ---~~~~~~---------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         ...++.         -++++.++.+++.+|++.||.+|||+.+++++
T Consensus       242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence               001111         13478899999999999999999999999874

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=4.7e-25  Score=175.42  Aligned_cols=170  Identities=21%  Similarity=0.371  Sum_probs=136.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|+..++||+|+||.|+.++...   .+..+++|.+.         ..+.+|++++++++|+||+++++++...+..+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~   77 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTE---DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIE   77 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcC---CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEE
Confidence            47888999999999999988765   67889999763         4578899999999999999999999998889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++.+.                               ++++                            
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          78 MEYA-NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             EEec-CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence            9999 999999988653                               1111                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ..+..++.++||||||+++|||++  +..||...+..+....+....       ..+.+..++.
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~--g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  227 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT--LKRTFDATNPLNLVVKIVQGN-------YTPVVSVYSS  227 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHcCC-------CCCCccccCH
Confidence                            112235678999999999999999  568888766666555544321       1223456789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ++.+++.+||+.+|.+||++.++++++
T Consensus       228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         228 ELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=5.4e-25  Score=177.77  Aligned_cols=183  Identities=30%  Similarity=0.543  Sum_probs=133.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEec-cCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETED-IELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGE--QP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~-~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~   98 (228)
                      ...++++.+.||+|+||.||++.... ....+..|++|.++       ..+.+|++++.+++|+||+++++++...  ..
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           2 EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             ccccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            45678999999999999999998642 11256889999984       3578999999999999999999987543  46


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++|+|.+++...                              ++++                         
T Consensus        82 ~~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          82 LRLVMEYL-PYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             eEEEEEec-CCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence            78999999 999999998643                              1222                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH------------HHHHHHHHh
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE------------QVIQNAEHM  169 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~------------~~~~~~~~~  169 (228)
                                            ..+..++.++||||||++++||++++  .++......            .....+...
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS--DKSCSPPAEFMRMMGNDKQGQMIVYHLIEL  238 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcC--CcCCCcchhhhhhcccccccccchHHHHHH
Confidence                                  11234678899999999999999953  332211110            001111111


Q ss_pred             hhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          170 YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....   ...+.+..++.++.+++.+||+.+|++|||+.+|+..|+.+
T Consensus       239 ~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         239 LKNN---GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HhcC---CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            1111   13344567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=3.6e-25  Score=177.36  Aligned_cols=177  Identities=19%  Similarity=0.242  Sum_probs=135.4

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      .++..+++.....||+|+||.||+|....   ++..|++|.+.       ..+.+|+.+++.++|+||+++++++...+.
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLS---TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF   79 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecC---CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence            34556667677899999999999998765   67889999873       457899999999999999999999998889


Q ss_pred             CeEEEeeccccCCHHHHhhhC--------------------------------Cccc-----------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT-----------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~-----------------------  123 (228)
                      .++++||+ ++++|.+++...                                ++++                       
T Consensus        80 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          80 FKIFMEQV-PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEEEEecC-CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence            99999999 999999988642                                1111                       


Q ss_pred             ----------------------ccc--CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ----------------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ----------------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                            ...  ..++.++||||||+++|+|++  +..||................     ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~  231 (268)
T cd06624         159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT--GKPPFIELGEPQAAMFKVGMF-----KIHP  231 (268)
T ss_pred             cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh--CCCCCccccChhhhHhhhhhh-----ccCC
Confidence                                  001  126788999999999999999  568887544322211111000     0022


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..|..+++++.+++.+||+.+|.+|||+.+++.+
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            3456788999999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0597|consensus

Probab=99.94  E-value=1.2e-26  Score=194.08  Aligned_cols=168  Identities=22%  Similarity=0.387  Sum_probs=143.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|-+.+.||+|+||.||+|+-+.   +...||+|.+.         ..+.+|+++++.++||||+.++..|+....+++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~---t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~v   78 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY---TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWV   78 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc---ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEE
Confidence            356677889999999999998765   77899999993         337899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      |+||| . |+|..+|..+                             ||++                             
T Consensus        79 Vte~a-~-g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~v  156 (808)
T KOG0597|consen   79 VTEYA-V-GDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSV  156 (808)
T ss_pred             Eehhh-h-hhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCcee
Confidence            99999 7 5999988766                             2332                             


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     ..++.|+..+|.||+||++||+++  |.+||...+..++...|..-        ....|+..+.+
T Consensus       157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~--G~PPF~a~si~~Lv~~I~~d--------~v~~p~~~S~~  226 (808)
T KOG0597|consen  157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV--GQPPFYARSITQLVKSILKD--------PVKPPSTASSS  226 (808)
T ss_pred             eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc--CCCCchHHHHHHHHHHHhcC--------CCCCcccccHH
Confidence                           557789999999999999999999  67999988888887777542        23346788999


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+++...++.||..|.|..+++.|
T Consensus       227 f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  227 FVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHHHHHHhhcChhhcccHHHHhcC
Confidence            9999999999999999999998863

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=1.8e-25  Score=178.87  Aligned_cols=175  Identities=21%  Similarity=0.380  Sum_probs=135.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   ++..+++|.+.          .++.+|+.+++.++|+||+++++++...+..+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN   78 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecC---CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEE
Confidence            357788999999999999998765   67899999763          35778999999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------r~l~------------------------  123 (228)
                      ++|||+ ++++|.+++...                                 ++|+                        
T Consensus        79 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          79 IVLELA-DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEec-CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            999999 999999887531                                 1121                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH--HHHHHHHHhhhCCCccccCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE--QVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                          .....++.++||||||+++|||++  +..||.+....  .....+.....      ....
T Consensus       158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~------~~~~  229 (267)
T cd08229         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLCKKIEQCDY------PPLP  229 (267)
T ss_pred             cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh--CCCCcccccchHHHHhhhhhcCCC------CCCC
Confidence                                123456778999999999999999  56788654322  22222221110      1112


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +..++.++.+++.+||+.+|.+|||+.+|++.++++
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            345788999999999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=1.5e-25  Score=184.33  Aligned_cols=163  Identities=20%  Similarity=0.351  Sum_probs=131.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   .+..||+|.++.          .+.+|+.++..+ +|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~   77 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG---TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY   77 (318)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            368999999999998865   678999998852          245688888777 799999999999988899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (318)
T cd05570          78 V-NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTF  156 (318)
T ss_pred             C-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccce
Confidence            9 999998877544                             2222                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 ..+..++.++|||||||++|||++  |..||...+.......+...        ....|..++.++.++
T Consensus       157 ~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~--G~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (318)
T cd05570         157 CGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA--GQSPFEGDDEDELFQSILED--------EVRYPRWLSKEAKSI  226 (318)
T ss_pred             ecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCcCCHHHHHH
Confidence                       223467889999999999999999  67899887776665555432        233466788999999


Q ss_pred             HHHhhccCCCCCCCH-----HHHHHH
Q psy796          193 MCDCWKRDQTMRPTF-----KQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rps~-----~~v~~~  213 (228)
                      +.+||+.+|.+||++     .+++.+
T Consensus       227 i~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         227 LKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.2e-25  Score=179.20  Aligned_cols=169  Identities=21%  Similarity=0.378  Sum_probs=135.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|++.+.||+|+||.||+|....   ++..|++|.+.        ..+.+|+++++.++|+|++++++++......++++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKR---TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM   78 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECC---CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence            56778899999999999999865   78899999874        34678999999999999999999999888899999


Q ss_pred             eeccccCCHHHHhhhC----------------------------Cccc--------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA----------------------------DNLT--------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------------  123 (228)
                      ||+ ++++|.+++...                            ++++                                
T Consensus        79 e~~-~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          79 EYC-GGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             Eee-CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            999 999999988764                            1111                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC-CcHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL-CPRDIY  190 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~  190 (228)
                                  .....++.++||||||+++|||++  |..||...+.......+....       ....+.. ++.++.
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  228 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK--GEPPLSDLHPMRVLFLIPKNN-------PPSLEGNKFSKPFK  228 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCcccCchHHHHHHhhhcC-------CCCCcccccCHHHH
Confidence                        222346789999999999999999  678998766555444443321       1112223 788999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||..+|++|||+++++++
T Consensus       229 ~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         229 DFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             HHHHHHhhCChhhCcCHHHHhhC
Confidence            99999999999999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.94  E-value=2e-25  Score=183.38  Aligned_cols=162  Identities=25%  Similarity=0.412  Sum_probs=130.1

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchHH----------HHHHHHHHhh-CCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------SLREIRFLSS-LQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------~~~e~~~l~~-l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||+|....   .+..||+|.++..          ...|..++.. ++||||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey   77 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY   77 (316)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence            368999999999999875   6789999988532          4567777775 4899999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (316)
T cd05619          78 L-NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTF  156 (316)
T ss_pred             C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeee
Confidence            9 999999888653                             2322                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 ..+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--G~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (316)
T cd05619         157 CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI--GQSPFHGHDEEELFQSIRMD--------NPCYPRWLTREAKDI  226 (316)
T ss_pred             cCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCccCCHHHHHH
Confidence                       223467889999999999999999  67899888777666655432        223455688999999


Q ss_pred             HHHhhccCCCCCCCHH-HHHH
Q psy796          193 MCDCWKRDQTMRPTFK-QIYS  212 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~-~v~~  212 (228)
                      +.+||+.+|.+||++. ++.+
T Consensus       227 i~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         227 LVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHhccCHhhcCCChHHHHc
Confidence            9999999999999996 6654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=4.1e-25  Score=175.64  Aligned_cols=170  Identities=40%  Similarity=0.773  Sum_probs=139.2

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|+||.||++........+..|++|.++        ..+.+|++.+..++|+|++++++++......+++|||+ +
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM-E   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec-c
Confidence            36899999999999987521237899999984        35678999999999999999999999888899999999 9


Q ss_pred             cCCHHHHhhhC--------------------------------------Cccc---------------------------
Q psy796          109 LGDLVQHLNSA--------------------------------------DNLT---------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~--------------------------------------r~l~---------------------------  123 (228)
                      +++|.+++...                                      +|++                           
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  159 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD  159 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence            99999998652                                      1221                           


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||++++||+++ |..||......+....+....       ....+..
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~  231 (262)
T cd00192         160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTL-GATPYPGLSNEEVLEYLRKGY-------RLPKPEY  231 (262)
T ss_pred             ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-------CCCCCcc
Confidence                               1123567889999999999999996 378998887777766665421       3455677


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ++.++.+++.+||+.+|.+|||+.+++.+|+
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         232 CPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            8999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=4.7e-26  Score=187.20  Aligned_cols=165  Identities=19%  Similarity=0.309  Sum_probs=132.2

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      +.||+|+||.||++........+..||+|.++         ..+.+|++++.+++|+||+++++++..+...+++|||+ 
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~-   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL-   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC-
Confidence            57999999999998764323367899999884         23567999999999999999999999988999999999 


Q ss_pred             ccCCHHHHhhhC-----------------------------Cccc-----------------------------------
Q psy796          108 QLGDLVQHLNSA-----------------------------DNLT-----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~-----------------------------r~l~-----------------------------------  123 (228)
                      ++|+|.+++...                             +||+                                   
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            999999988654                             2332                                   


Q ss_pred             ---------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 ---------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 ---------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                               .....++.++||||||+++|||++  |..||...+..+....+...        ....|..++.++.+++.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~~~~~~i~~~--------~~~~p~~~~~~~~~li~  230 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT--GSLPFQGKDRKETMTMILKA--------KLGMPQFLSPEAQSLLR  230 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeeeecc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHHHH
Confidence                     223356789999999999999999  67899887776666555432        23456678899999999


Q ss_pred             HhhccCCCCCCC-----HHHHHH
Q psy796          195 DCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       195 ~c~~~~p~~Rps-----~~~v~~  212 (228)
                      +||+.+|.+||+     +.+++.
T Consensus       231 ~~l~~~P~~R~~a~~~~~~~~~~  253 (318)
T cd05582         231 ALFKRNPANRLGAGPDGVEEIKR  253 (318)
T ss_pred             HHhhcCHhHcCCCCCCCHHHHhC
Confidence            999999999999     555554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=5.5e-25  Score=176.06  Aligned_cols=168  Identities=24%  Similarity=0.351  Sum_probs=132.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      +.+...||+|+||.||+|....   .+..+++|.+.                +.+.+|+.++++++|+||+++++++...
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNAS---SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA   78 (267)
T ss_pred             ccccceeecCCCeEEEEEEecC---CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence            4566889999999999998764   67889999773                3467899999999999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      ...+++|||+ ++++|.+++...                             ++++                        
T Consensus        79 ~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          79 DHLNIFLEYV-PGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             CccEEEEEec-CCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            8999999999 999999888654                             1111                        


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++|+||||+++|+|++  |..||...+.......+....       
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-------  228 (267)
T cd06628         158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT--GKHPFPDCTQLQAIFKIGENA-------  228 (267)
T ss_pred             cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh--CCCCCCCccHHHHHHHHhccC-------
Confidence                                      112235678999999999999999  678998766544433332211       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+..++.++.+++.+||+.+|.+||++.+++++
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         229 SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            223456688999999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=1.3e-25  Score=180.85  Aligned_cols=169  Identities=20%  Similarity=0.370  Sum_probs=134.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      .|+..+.||+|+||.||+|....   .+..||+|.++        ..+.+|+.+++.+.|+|++++++++.+....+++|
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNR---TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM   81 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEcc---CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45667889999999999998865   67899999874        34778999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC----------------------------Cccc--------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA----------------------------DNLT--------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------------  123 (228)
                      ||+ ++++|.+++...                            ++|+                                
T Consensus        82 e~~-~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06640          82 EYL-GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             ecC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence            999 999999987643                            1111                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++|+||||+++|||++  |..||...........+....       ....+..++..+.+
T Consensus       161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  231 (277)
T cd06640         161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK--GEPPNSDMHPMRVLFLIPKNN-------PPTLTGEFSKPFKE  231 (277)
T ss_pred             ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHH--CCCCCCCcChHhHhhhhhcCC-------CCCCchhhhHHHHH
Confidence                        223456789999999999999999  678988766655443332111       12234457788999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+||+.+|++||++.+++.+
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         232 FIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHcccCcccCcCHHHHHhC
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.93  E-value=4.7e-25  Score=176.36  Aligned_cols=169  Identities=22%  Similarity=0.371  Sum_probs=132.1

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      +...+.||+|+||.||+|...    ++..+|+|.++             ..+.+|+++++.++|+||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   77 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTN----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTI   77 (265)
T ss_pred             ccccceEeccCCeEEEEEEEc----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeE
Confidence            567789999999999999763    67889999773             3477899999999999999999999988899


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      ++++||+ ++++|.+++.+.                             ++|+                           
T Consensus        78 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          78 SIFMEFV-PGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             EEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence            9999999 999999998653                             1111                           


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||++++||++  |..||...+.......+....  .   ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~--~---~~~~  229 (265)
T cd06631         157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT--GKPPLASMDRLAAMFYIGAHR--G---LMPR  229 (265)
T ss_pred             ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh--CCCccccCChHHHHHHhhhcc--C---CCCC
Confidence                                   112235788999999999999999  678997665443332222110  0   0223


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+..++.++.+++.+||+.+|.+||++.+++.+
T Consensus       230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            456688999999999999999999999998763

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.4e-25  Score=174.54  Aligned_cols=166  Identities=38%  Similarity=0.789  Sum_probs=134.4

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|+||.||++...    .++.|++|.++        ..+.+|+++++++.|+||+++++++...+..+++|||+ +
T Consensus         1 ~~lg~g~~g~v~~~~~~----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~-~   75 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELV-P   75 (251)
T ss_pred             CccccCCCceEEEEEEe----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcC-C
Confidence            36899999999999875    47899999874        45788999999999999999999999999999999999 9


Q ss_pred             cCCHHHHhhhC------------------------------Cccc-----------------------------------
Q psy796          109 LGDLVQHLNSA------------------------------DNLT-----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~------------------------------r~l~-----------------------------------  123 (228)
                      +++|.+++...                              +|++                                   
T Consensus        76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (251)
T cd05041          76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK  155 (251)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence            99999988542                              1111                                   


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++|+||||++++||+++ +..||...........+....       ..+.+..++.++.++
T Consensus       156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~-~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l  227 (251)
T cd05041         156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSL-GDTPYPGMSNQQTRERIESGY-------RMPAPQLCPEEIYRL  227 (251)
T ss_pred             cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhc-cCCCCccCCHHHHHHHHhcCC-------CCCCCccCCHHHHHH
Confidence                       1223567789999999999999996 368888777665555443221       234456788999999


Q ss_pred             HHHhhccCCCCCCCHHHHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +.+||+.+|.+||++.++++.|+
T Consensus       228 i~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         228 MLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHhccChhhCcCHHHHHHHhh
Confidence            99999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.93  E-value=5.4e-25  Score=179.17  Aligned_cols=173  Identities=18%  Similarity=0.309  Sum_probs=137.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +..+|++.+.||.|+||.||+|....   .++.|++|.+.       ..+.+|+..++.++|+|++++++.+...+..++
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVA---TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcC---CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEE
Confidence            34568899999999999999998755   77899999883       457889999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC----------------------------Cccc------------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA----------------------------DNLT------------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~----------------------------r~l~------------------------------  123 (228)
                      ++||+ ++++|.+++...                            +||+                              
T Consensus        94 v~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  172 (296)
T cd06655          94 VMEYL-AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR  172 (296)
T ss_pred             EEEec-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence            99999 999998877653                            2222                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    .....++.++|||||||++|+|++  |..||...+.......+....     .+....+..++..+
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~llt--g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  245 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLRALYLIATNG-----TPELQNPEKLSPIF  245 (296)
T ss_pred             CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcC-----CcccCCcccCCHHH
Confidence                          122346788999999999999999  668998776654433332211     11233456788999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .+++.+||..+|.+||++.+++.
T Consensus       246 ~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         246 RDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHhhcChhhCCCHHHHhh
Confidence            99999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=2.6e-25  Score=178.11  Aligned_cols=170  Identities=39%  Similarity=0.729  Sum_probs=133.1

Q ss_pred             eeecccceeeEEEEEEeccC---CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIE---LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~---~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||+|......   ..+..+++|.+.        ..+.+|+.+++.++|+||+++++++......+++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            35899999999999875311   123689999873        3578899999999999999999999888889999999


Q ss_pred             ccccCCHHHHhhhC------------------------------------Cccc--------------------------
Q psy796          106 PAQLGDLVQHLNSA------------------------------------DNLT--------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~------------------------------------r~l~--------------------------  123 (228)
                      + ++++|.+++.+.                                    ++++                          
T Consensus        81 ~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044          81 M-EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             c-CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence            9 999999988531                                    1111                          


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....++.++||||||+++|||++. +..||...+..+....+....       .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~-g~~p~~~~~~~~~~~~~~~~~-------~  231 (269)
T cd05044         160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTL-GQQPYPALNNQEVLQHVTAGG-------R  231 (269)
T ss_pred             ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHc-CCCCCcccCHHHHHHHHhcCC-------c
Confidence                                     1123456789999999999999985 358888777666555443211       3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ...+..++..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         232 LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            3445678899999999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=5.8e-25  Score=176.45  Aligned_cols=176  Identities=26%  Similarity=0.560  Sum_probs=135.2

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC------
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ------   97 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~------   97 (228)
                      |.+.++||+|+||.||+|.+......+..||+|.+.         +.+.+|+++++.++|+||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999886543357899999874         34778999999999999999999886432      


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------------Cccc-------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT-------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~-------------------  123 (228)
                      ..+++++|+ .+|+|.+++...                                   +|++                   
T Consensus        81 ~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          81 IPMVILPFM-KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             ceEEEEecC-CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence            247889999 999998776321                                   2222                   


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++||||||+++|||+++ +..||.+.+..+....+....      
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~------  232 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTR-GQTPYAGVENSEIYNYLIKGN------  232 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhC-CCCCCCCCCHHHHHHHHHcCC------
Confidence                                       1122346789999999999999985 468888776665555444321      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....+..++.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       233 -~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         233 -RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             -cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             2334456789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.93  E-value=4.9e-25  Score=179.39  Aligned_cols=173  Identities=19%  Similarity=0.325  Sum_probs=136.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ..+|++.+.||+|+||.||+|....   .+..|++|.+.       ..+.+|+.+++.+.|+|++++++.+......+++
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECC---CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            3568889999999999999998754   67899999884       4577899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||+ ++++|.+++...                            +||+                               
T Consensus        96 ~e~~-~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  174 (296)
T cd06654          96 MEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (296)
T ss_pred             eccc-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence            9999 999999988643                            2222                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++|||||||++|+|++  |..||...+...........   .  .+....+..++..+.
T Consensus       175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~--g~~pf~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~l~  247 (296)
T cd06654         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRALYLIATN---G--TPELQNPEKLSAIFR  247 (296)
T ss_pred             cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh--CCCCCCCCCHHHhHHHHhcC---C--CCCCCCccccCHHHH
Confidence                         122346788999999999999999  67898776654332222111   0  112233556788999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||..+|++||++.+++.+
T Consensus       248 ~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         248 DFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHHHCcCCcccCcCHHHHhhC
Confidence            99999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=4.4e-25  Score=180.18  Aligned_cols=181  Identities=27%  Similarity=0.490  Sum_probs=139.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      |...+++..+.||+|+||.||+|.+..... ....||+|.+.        ..+.+|+.++..++|+||++++|++... .
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~   82 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T   82 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence            455678888999999999999998864211 12467898774        2577899999999999999999998654 4


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++++||+ ++|+|.+++..+                              +|++                         
T Consensus        83 ~~~v~e~~-~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          83 IQLVTQLM-PHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             ceeeehhc-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence            67999999 999999988653                              2222                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||++. +..||.+....+....+....       ..+.+
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~  233 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF-GGKPYDGIPTREIPDLLEKGE-------RLPQP  233 (303)
T ss_pred             cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHCCC-------CCCCC
Confidence                                 1223456789999999999999974 358887766655554443221       33445


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..++..+.+++..||..+|++||++.++++.|+.+.
T Consensus       234 ~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         234 PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            668889999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.93  E-value=7.3e-25  Score=175.75  Aligned_cols=173  Identities=31%  Similarity=0.463  Sum_probs=127.4

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|+||.||+|...... ....+++|.++        ..+.+|+.++.+++|+||++++|++......+++|||+ +
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGY-TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFC-P   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECC-C
Confidence            35899999999999875311 45679999874        35788999999999999999999998888899999999 9


Q ss_pred             cCCHHHHhhhC----------------------------------Cccc-------------------------------
Q psy796          109 LGDLVQHLNSA----------------------------------DNLT-------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~----------------------------------r~l~-------------------------------  123 (228)
                      +|+|.+++...                                  +|++                               
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            99999988632                                  1222                               


Q ss_pred             ---------------cc-------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ---------------RD-------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ---------------~~-------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                     ..       ...++.++||||||+++|||++. |..||......+...........  .......
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~  235 (269)
T cd05087         159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL-GSQPYRHLSDEQVLTYTVREQQL--KLPKPRL  235 (269)
T ss_pred             CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHhhcccC--CCCCCcc
Confidence                           00       01236789999999999999964 46899877666544332221110  0001111


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ....++.+.+++..|| .+|++|||+.+|++.|+
T Consensus       236 ~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         236 KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2346788999999999 57999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=2.8e-25  Score=179.56  Aligned_cols=180  Identities=21%  Similarity=0.326  Sum_probs=137.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      +..++|++.+.||+|+||.||++....   .+..||+|.+.        ..+.+|++++..++|+||+++++.+...+..
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHIP---TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNI   78 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEcC---CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEE
Confidence            455678889999999999999998865   67889999763        4578899999999999999999999999899


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      +++|||+ ++++|.+++...                              ++++                          
T Consensus        79 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          79 CMCMEFM-DCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEEEecC-CCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence            9999999 999998776542                              1122                          


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH--------HHHHHHHHhhhCCCccccC
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE--------QVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~  179 (228)
                                      .....++.++||||||++++||++  |..||...+..        .+...+.......    ..
T Consensus       158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  231 (284)
T cd06620         158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELAL--GKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP----PP  231 (284)
T ss_pred             ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHh--CCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----CC
Confidence                            223456789999999999999999  66888765432        1122222211111    11


Q ss_pred             CC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PK-PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~-~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .. ...++.++.+++.+||+.+|++|||+.+++++.--+
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         232 RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            11 223778999999999999999999999999875444

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.93  E-value=1.4e-25  Score=180.74  Aligned_cols=169  Identities=21%  Similarity=0.367  Sum_probs=132.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      .|...+.||+|+||.||+|....   .+..||+|.++        ..+.+|+.++++++|+||+++++++..++..+++|
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNR---TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcC---CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence            35566789999999999998765   67899999874        35788999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhC----------------------------Cccc--------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA----------------------------DNLT--------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------------  123 (228)
                      ||+ ++++|.+++...                            ++++                                
T Consensus        82 e~~-~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06642          82 EYL-GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             Ecc-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence            999 999998887543                            1111                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++||||||++++||++  |..||...........+....       ....+..++.++.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  231 (277)
T cd06642         161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK--GEPPNSDLHPMRVLFLIPKNS-------PPTLEGQYSKPFKE  231 (277)
T ss_pred             ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHh--CCCCCcccchhhHHhhhhcCC-------CCCCCcccCHHHHH
Confidence                        223346778999999999999999  668887665544433322111       11223457789999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+||+.+|.+||++.+++.+
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         232 FVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHccCCcccCcCHHHHHHh
Confidence            9999999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.6e-25  Score=175.81  Aligned_cols=176  Identities=20%  Similarity=0.335  Sum_probs=137.0

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      |.++|++.+.||+|+||.||++....   .+..+++|.+.       ..+.+|++++++++|+|++++++++......++
T Consensus         1 ~~~~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           1 PQEDYELIQRIGSGTYGDVYKARDIA---TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             CccceEEEEEecCCCceEEEEeEecC---CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEE
Confidence            46788999999999999999998865   56789999874       457899999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ ++++|.+++...                              ++++                            
T Consensus        78 ~~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          78 VMEYC-GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             EEeCC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            99999 999999887543                              1111                            


Q ss_pred             ----------------cccC---CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 ----------------RDRD---RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 ----------------~~~~---~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                      ....   .++.++||||||+++|||++  |..||...+............   -.......+..
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~t--g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  231 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAE--LQPPMFDLHPMRALFLISKSN---FPPPKLKDKEK  231 (262)
T ss_pred             ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcc---CCCccccchhh
Confidence                            1122   56778999999999999999  568888776554433332210   01112223344


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+.++.+++.+||+.+|.+|||+.+|+.+
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         232 WSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             hhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            67889999999999999999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.93  E-value=3.9e-25  Score=182.20  Aligned_cols=168  Identities=21%  Similarity=0.339  Sum_probs=134.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCC-CCcceeeeeeeCCCCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQD-PNLVSILGVCTGEQPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h-~niv~~~g~~~~~~~~~  100 (228)
                      +|++.+.||+|+||.||+|....   .++.||+|+++          ..+..|++++..+.| ++|+++++++...+..+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   77 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEE
Confidence            47889999999999999998865   67899999884          235678888888865 56888999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++|+|.+++...                             +||+                            
T Consensus        78 lv~E~~-~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05587          78 FVMEYV-NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK  156 (324)
T ss_pred             EEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence            999999 999998887543                             3333                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ..+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..++.
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--G~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~  226 (324)
T cd05587         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--GQPPFDGEDEDELFQSIMEH--------NVSYPKSLSK  226 (324)
T ss_pred             ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCH
Confidence                            223456789999999999999999  67999888777766665432        3345667899


Q ss_pred             HHHHHHHHhhccCCCCCCCH-----HHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTF-----KQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~-----~~v~~~  213 (228)
                      ++.+++.+||..+|.+|++.     .++.++
T Consensus       227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         227 EAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            99999999999999999976     566543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=2.9e-25  Score=182.38  Aligned_cols=162  Identities=25%  Similarity=0.419  Sum_probs=128.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchHH----------HHHHHHHHhh-CCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------SLREIRFLSS-LQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------~~~e~~~l~~-l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||+|....   .+..||+|.++..          ...|..++.. .+|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~   77 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG---TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            368999999999999865   6789999988522          3456666654 4899999999999888889999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~  156 (316)
T cd05592          78 L-NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF  156 (316)
T ss_pred             C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccc
Confidence            9 999999887543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 ..+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~--G~~Pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (316)
T cd05592         157 CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI--GQSPFHGEDEDELFDSILND--------RPHFPRWISKEAKDC  226 (316)
T ss_pred             cCCccccCHHHHcCCCCCCcccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHH
Confidence                       233457889999999999999999  67999988877666555332        234566788999999


Q ss_pred             HHHhhccCCCCCCCHH-HHHH
Q psy796          193 MCDCWKRDQTMRPTFK-QIYS  212 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~-~v~~  212 (228)
                      +.+||+.+|.+||++. +++.
T Consensus       227 l~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         227 LSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHHHccCCHHHcCCChHHHHc
Confidence            9999999999999875 5544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=2.5e-25  Score=183.15  Aligned_cols=157  Identities=22%  Similarity=0.356  Sum_probs=128.0

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   .++.||+|.++.          .+.+|..++..+ +|+||+++++++...+..+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey   77 (320)
T cd05590           1 RVLGKGSFGKVMLARLKE---SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF   77 (320)
T ss_pred             CeeeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence            368999999999998865   678999998852          245677777766 699999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (320)
T cd05590          78 V-NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF  156 (320)
T ss_pred             C-CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccc
Confidence            9 999999887654                             2333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||++  |..||.+.+..+....+...        ....|..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~Pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (320)
T cd05590         157 CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC--GHAPFEAENEDDLFEAILND--------EVVYPTWLSQDAVDI  226 (320)
T ss_pred             ccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHH
Confidence                       223456788999999999999999  67999888877766655432        234466788999999


Q ss_pred             HHHhhccCCCCCCCH
Q psy796          193 MCDCWKRDQTMRPTF  207 (228)
Q Consensus       193 i~~c~~~~p~~Rps~  207 (228)
                      +.+||+.||.+||++
T Consensus       227 i~~~L~~dP~~R~~~  241 (320)
T cd05590         227 LKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHcccCHHHCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.93  E-value=2.9e-25  Score=183.20  Aligned_cols=172  Identities=16%  Similarity=0.254  Sum_probs=128.0

Q ss_pred             eeeeeccc--ceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           35 VLERLGSC--HLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        35 ~~~~ig~G--~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.++||+|  +||.||++....   ++..||+|.++         ..+.+|+++++.++|+||+++++++..++..+++|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKP---TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT   78 (327)
T ss_pred             hhhhccccccceEEEEEEeecc---cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence            46789999  789999998876   78999999885         23667999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC-------------------------------Cccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------------  123 (228)
                      ||+ ++|+|.+++..+                               +||+                             
T Consensus        79 e~~-~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          79 SFM-AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             ecc-CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            999 999999988532                               2222                             


Q ss_pred             ----------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC-----
Q psy796          124 ----------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE-----  174 (228)
Q Consensus       124 ----------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----  174 (228)
                                            ..  ...++.++|||||||++|||++  |..||...+................     
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  235 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN--GHVPFKDMPATQMLLEKLNGTVPCLLDTTT  235 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHH--CCCCCCCcchhHHHHHHhcCCccccccccc
Confidence                                  00  1246789999999999999999  6789987655443222211100000     


Q ss_pred             ---------------------------ccc------cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 ---------------------------LQV------FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 ---------------------------~~~------~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                                                 .++      ..+....++.++.+++.+||+.||++|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                                       000      00011234678999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.93  E-value=2.2e-25  Score=179.95  Aligned_cols=170  Identities=21%  Similarity=0.370  Sum_probs=134.2

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +++.+.||+|+||.||+|....   .+..+++|.+.       ..+.+|+++++.++|+|++++++++...+..++++||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKE---TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECC---CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            5677889999999999998865   67888998873       4477899999999999999999999988889999999


Q ss_pred             ccccCCHHHHhhhC------------------------------Cccc--------------------------------
Q psy796          106 PAQLGDLVQHLNSA------------------------------DNLT--------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~------------------------------r~l~--------------------------------  123 (228)
                      + ++++|..++.+.                              +||+                                
T Consensus        84 ~-~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (282)
T cd06643          84 C-AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  162 (282)
T ss_pred             c-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence            9 999998877532                              2222                                


Q ss_pred             ------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 ------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 ------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                  .     ....++.++|||||||++|||++  +.+||...+.......+....     .+....+..++
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  235 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQ--IEPPHHELNPMRVLLKIAKSE-----PPTLAQPSRWS  235 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHcc--CCCCccccCHHHHHHHHhhcC-----CCCCCCccccC
Confidence                        0     12335678999999999999999  568888776655544443321     11233456688


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++.+||+.+|.+||++.+++++
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         236 SEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999998863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=8.5e-25  Score=176.79  Aligned_cols=182  Identities=29%  Similarity=0.577  Sum_probs=133.2

Q ss_pred             CCCceeeeeecccceeeEEEEEEec-cCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETED-IELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE--QP   98 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~-~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~   98 (228)
                      ...|+..+.||+|+||.||.+.+.. ....+..|++|.++        ..+.+|+++++.++|+|++++++++...  ..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            4557888999999999999998642 12257889999884        4578899999999999999999998775  46


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++++|.+++...                              +|++                         
T Consensus        83 ~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          83 IKLIMEFL-PSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             eEEEEEcc-CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence            78999999 999999988543                              2222                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC-CC----------hHHHHHHHHHhh
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH-LT----------NEQVIQNAEHMY  170 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~-~~----------~~~~~~~~~~~~  170 (228)
                                            ..+..++.++||||||++++||++++  .|+.. ..          ............
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC--DSESSPMTLFLKMIGPTHGQMTVTRLVRVL  239 (284)
T ss_pred             CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC--CCCccccchhhhhcccccccccHHHHHHHH
Confidence                                  12234678899999999999999953  22211 00          000011111111


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....   ..+.+..++.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       240 ~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         240 EEGK---RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HcCc---cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            1111   2334567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=5.8e-25  Score=174.76  Aligned_cols=169  Identities=21%  Similarity=0.469  Sum_probs=134.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|.+.+.||+|+||.||++....   .+..+++|.+.         ..+.+|+++++.++|+|++++++.+...+..+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS---DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC---CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEE
Confidence            46788999999999999999876   67889999883         3467899999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      +||+ ++++|.+++...                               ++++                            
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          78 MEYC-DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             EecC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence            9999 999999988543                               1111                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++||||||++++||++  +..||...+..+.........       ..+.+...+
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~  227 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT--LKHPFEGNNLHQLVLKICQGY-------FAPISPNFS  227 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCccHHHHHHHHhccc-------CCCCCCCCC
Confidence                             112346788999999999999999  568887766555443332211       122345678


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++.+||+.+|++|||+.+++.+
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         228 RDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=5.1e-25  Score=177.45  Aligned_cols=170  Identities=19%  Similarity=0.369  Sum_probs=135.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +.|+..+.||+|+||.||+|....   .+..||+|...        ..+.+|+.++.+++|+||+++++++..+...+++
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   80 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   80 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECC---CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEE
Confidence            346677889999999999998765   67899999873        4577899999999999999999999998899999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||+ ++++|.+++...                            ++++                               
T Consensus        81 ~e~~-~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06641          81 MEYL-GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EEeC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence            9999 999999988643                            1111                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++|+||||+++|+|++  |..||...+.......+....       ....+..++.++.
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  230 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAK--GEPPHSELHPMKVLFLIPKNN-------PPTLEGNYSKPLK  230 (277)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHc--CCCCCCccchHHHHHHHhcCC-------CCCCCcccCHHHH
Confidence                         122345778999999999999999  678987766554444332211       1223456789999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||+.+|.+||++.+++++
T Consensus       231 ~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         231 EFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHccCChhhCcCHHHHHhC
Confidence            99999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=2.9e-25  Score=182.75  Aligned_cols=163  Identities=18%  Similarity=0.330  Sum_probs=132.3

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||+|....   .++.||+|.++.          .+..|.+++..+ +|+||+++++++...+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~   77 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG---TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY   77 (321)
T ss_pred             CccccCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence            368999999999998865   678999998852          245678888765 799999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (321)
T cd05591          78 V-NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTF  156 (321)
T ss_pred             C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccc
Confidence            9 999998877543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||++  |..||...+..+....+...        ....|..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t--g~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~~~~~~~l  226 (321)
T cd05591         157 CGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA--GQPPFEADNEDDLFESILHD--------DVLYPVWLSKEAVSI  226 (321)
T ss_pred             ccCccccCHHHHcCCCCCCccceechhHHHHHHhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHH
Confidence                       223457889999999999999999  67999988877776665432        233466688999999


Q ss_pred             HHHhhccCCCCCC-------CHHHHHHH
Q psy796          193 MCDCWKRDQTMRP-------TFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rp-------s~~~v~~~  213 (228)
                      +.+||+.+|.+|+       ++.+++++
T Consensus       227 l~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         227 LKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            9999999999999       78888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=5.7e-25  Score=177.73  Aligned_cols=179  Identities=21%  Similarity=0.390  Sum_probs=134.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeC--
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTG--   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~--   95 (228)
                      ...-..+++++.+.||+|+||.||++....   .+..+++|..+      ..+.+|+.++.++ +|+||+++++++..  
T Consensus        12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKK---NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             cCCCcccceeeeeeeccCCCcEEEEEEECC---CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            344466788999999999999999998865   67899999874      4577899999998 69999999998742  


Q ss_pred             ---CCCCeEEEeeccccCCHHHHhhhC---------------------------------Cccc----------------
Q psy796           96 ---EQPPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT----------------  123 (228)
Q Consensus        96 ---~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~----------------  123 (228)
                         .+..+++|||+ ++++|.+++...                                 ++++                
T Consensus        89 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~d  167 (286)
T cd06638          89 VKNGDQLWLVLELC-NGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVD  167 (286)
T ss_pred             cCCCCeEEEEEeec-CCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEcc
Confidence               34679999999 999998876421                                 2222                


Q ss_pred             ----------------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhh
Q psy796          124 ----------------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMY  170 (228)
Q Consensus       124 ----------------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~  170 (228)
                                                  .     ....++.++|||||||++|||++  +..||............... 
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~--g~~p~~~~~~~~~~~~~~~~-  244 (286)
T cd06638         168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD--GDPPLADLHPMRALFKIPRN-  244 (286)
T ss_pred             CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc--CCCCCCCCchhHHHhhcccc-
Confidence                                        0     11235779999999999999999  56888766544333222111 


Q ss_pred             hCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          171 YGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                          ..+....+..++.++.+++.+||+.+|++|||+.+++++.
T Consensus       245 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         245 ----PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             ----CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence                1112233556788999999999999999999999998763

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.93  E-value=5.8e-25  Score=185.06  Aligned_cols=173  Identities=20%  Similarity=0.278  Sum_probs=134.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      +.|+.++.||+|+||.||+|....   .+..||+|.+.          ..+.+|+.++..++|+||+++++++.+.+..+
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~   77 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVD---THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY   77 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEE
Confidence            357889999999999999998866   77899999984          23678999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc------------------c---------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------R---------  124 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------~---------  124 (228)
                      ++|||+ ++|+|.+++.+.                             |||+                  .         
T Consensus        78 lv~E~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~  156 (381)
T cd05626          78 FVMDYI-PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN  156 (381)
T ss_pred             EEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence            999999 999999988653                             3333                  0         


Q ss_pred             ----------------------------------------------------------------ccCCCCCccchHHHHH
Q psy796          125 ----------------------------------------------------------------DRDRYTCQSNVWSFAV  140 (228)
Q Consensus       125 ----------------------------------------------------------------~~~~~~~~~Dv~s~Gv  140 (228)
                                                                                      ....++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~  236 (381)
T cd05626         157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV  236 (381)
T ss_pred             cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence                                                                            0124678899999999


Q ss_pred             HHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHH--hhccCCCCCCCHHHHHHH
Q psy796          141 TLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD--CWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       141 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--c~~~~p~~Rps~~~v~~~  213 (228)
                      ++|||++  |..||...+.......+.....    ....+....++.++.+++.+  |+..++..|+++.+++.|
T Consensus       237 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         237 ILFEMLV--GQPPFLAPTPTETQLKVINWEN----TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHHHHHh--CCCCCcCCCHHHHHHHHHcccc----ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            9999999  6799988776555444432111    11233344678999999988  555566679999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.93  E-value=7.7e-25  Score=179.22  Aligned_cols=179  Identities=22%  Similarity=0.315  Sum_probs=133.9

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|++.+.||+|+||.||++....   .+..+++|.++        ..+.+|++++.+++|+||+++++++..++..+++|
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   78 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRP---SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM   78 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcC---CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence            58889999999999999998765   67789998873        34778999999999999999999999998999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ ++++|.+++...                              +|++                              
T Consensus        79 ey~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (308)
T cd06615          79 EHM-DGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  157 (308)
T ss_pred             ecc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence            999 999999887543                              1222                              


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------------------
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------------------  173 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------------  173 (228)
                                  ..+..++.++||||||++++||++  |..||...+.......+.......                  
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI--GRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPR  235 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHh--CCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccc
Confidence                        123456788999999999999999  567886554433322221110000                  


Q ss_pred             -------------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 -------------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 -------------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                   ...+..+ ...++.++++++.+||+.+|++||++.+|+++  +...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         236 PMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                         0000001 11367789999999999999999999999986  4444

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=5.2e-25  Score=181.37  Aligned_cols=167  Identities=20%  Similarity=0.330  Sum_probs=134.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~  100 (228)
                      +|.+.+.||+|+||.||+|....   .+..||+|.++.          .+..|..++..+ +|++|+++++++...+..+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLY   77 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEE
Confidence            47888999999999999998865   678999998852          245567777766 5899999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||+ ++|+|.+++...                             +||+                            
T Consensus        78 lv~E~~-~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~  156 (323)
T cd05616          78 FVMEYV-NGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV  156 (323)
T ss_pred             EEEcCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence            999999 999999887543                             3333                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--g~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~s~  226 (323)
T cd05616         157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--GQAPFEGEDEDELFQSIMEH--------NVAYPKSMSK  226 (323)
T ss_pred             ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCCcCCH
Confidence                            334467889999999999999999  67999988877776666543        2345667899


Q ss_pred             HHHHHHHHhhccCCCCCCCH-----HHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTF-----KQIYS  212 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~-----~~v~~  212 (228)
                      ++.+++.+|++.+|.+|++.     .++.+
T Consensus       227 ~~~~li~~~l~~~p~~R~~~~~~~~~~i~~  256 (323)
T cd05616         227 EAVAICKGLMTKHPGKRLGCGPEGERDIKE  256 (323)
T ss_pred             HHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence            99999999999999999984     55554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=4.2e-25  Score=178.59  Aligned_cols=173  Identities=23%  Similarity=0.380  Sum_probs=135.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.++        ..+.+|+.++.+++|+||+++++++...+..+++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP---TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC   77 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence            357888999999999999998865   67899999773        3577899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC---------------------------------Cccc--------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------------  123 (228)
                      |||+ ++++|..++...                                 +||+                          
T Consensus        78 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  156 (286)
T cd06622          78 MEYM-DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS  156 (286)
T ss_pred             Eeec-CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence            9999 999998887652                                 1222                          


Q ss_pred             ----------------c------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------R------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------~------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                      .      ....++.++|+|||||++|||++  |..||...........+.......    ....
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~  230 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMAL--GRYPYPPETYANIFAQLSAIVDGD----PPTL  230 (286)
T ss_pred             ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHh--CCCCCCCcchhhHHHHHHHHhhcC----CCCC
Confidence                            0      11124678999999999999999  668887655544443333222111    1233


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++.+++.+||+.+|++||++.+++.+
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            55688999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=4.3e-25  Score=178.02  Aligned_cols=183  Identities=31%  Similarity=0.621  Sum_probs=136.6

Q ss_pred             cCCCceeeeeecccceeeEEEEEEecc-CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC--CC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG--EQ   97 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~--~~   97 (228)
                      ..+++++.+.||+|+||.||++.+... ...+..||+|.++        ..+.+|+++++.+.|+||+++++++..  ..
T Consensus         2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           2 EKRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             chhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence            346688889999999999999987532 1246889999884        357899999999999999999998876  45


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ ++++|.+++...                              +|++                        
T Consensus        82 ~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          82 SLRLIMEYL-PSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             ceEEEEecC-CCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            789999999 999999998653                              1222                        


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-----------HHHHHHHh
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-----------VIQNAEHM  169 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-----------~~~~~~~~  169 (228)
                                             .....++.++||||||++++||++|  ..|+.......           ....+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05038         161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTY--GDPSQSPPAEFLRMIGIAQGQMIVTRLLEL  238 (284)
T ss_pred             cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeecc--CCCcccccchhccccccccccccHHHHHHH
Confidence                                   1123456789999999999999994  46654432211           11111111


Q ss_pred             hhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          170 YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .....   ..+.+..++.++.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       239 ~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         239 LKEGE---RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHcCC---cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            11111   3344567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.93  E-value=1e-24  Score=177.92  Aligned_cols=176  Identities=18%  Similarity=0.234  Sum_probs=130.3

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .++|++.+.||+|+||.||+|....   ++..||+|.++        ..+.+|+.+++.++|+||+++++++.+....++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKV---NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECC---CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence            3678999999999999999998865   67899999884        346789999999999999999999998889999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + ++|.+++...                              +||+                            
T Consensus        81 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  158 (303)
T cd07869          81 VFEYV-H-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH  158 (303)
T ss_pred             EEECC-C-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence            99998 6 7887776542                              3333                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCC---cc------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGE---LQ------  176 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~---~~------  176 (228)
                                       .....++.++|||||||++|||++  |..||.+.... +....+........   +.      
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T cd07869         159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQ--GVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP  236 (303)
T ss_pred             cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence                             112346778999999999999999  67899875442 22222221110000   00      


Q ss_pred             ----ccCC--CC---------CCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          177 ----VFLP--KP---------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       177 ----~~~~--~~---------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                          ....  .+         ...+.++.+++.+|++.||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                0000  00         123567899999999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=4.8e-25  Score=181.12  Aligned_cols=161  Identities=24%  Similarity=0.388  Sum_probs=128.9

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhh-CCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSS-LQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~-l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||++....   .+..||+|.++.          ....|..++.. .+|+||+++++++...+..+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   77 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG---KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence            468999999999999875   678999999852          24557777765 4899999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (316)
T cd05620          78 L-NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTF  156 (316)
T ss_pred             C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceecc
Confidence            9 999998887653                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.+++++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~--g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l  226 (316)
T cd05620         157 CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI--GQSPFHGDDEDELFESIRVD--------TPHYPRWITKESKDI  226 (316)
T ss_pred             CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCCCCCHHHHHH
Confidence                       223467889999999999999999  67899887776666555432        233455688999999


Q ss_pred             HHHhhccCCCCCCCHH-HHH
Q psy796          193 MCDCWKRDQTMRPTFK-QIY  211 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~-~v~  211 (228)
                      +.+||+.||.+||++. ++.
T Consensus       227 i~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         227 LEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHccCCHHHcCCChHHHH
Confidence            9999999999999974 565

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.93  E-value=1.9e-24  Score=173.41  Aligned_cols=172  Identities=25%  Similarity=0.437  Sum_probs=126.8

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      .||+|+||.||+|...... ....+++|.++        ..+.+|+.++..++|+||+++++.+.+....+++|||+ ++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~   79 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDT-GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYC-EL   79 (268)
T ss_pred             cCCCCcCceEEEEEEEcCC-CcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecC-CC
Confidence            5899999999999764311 23456677553        45888999999999999999999999888899999999 99


Q ss_pred             CCHHHHhhhC---------------------------------Cccc---------------------------------
Q psy796          110 GDLVQHLNSA---------------------------------DNLT---------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~---------------------------------r~l~---------------------------------  123 (228)
                      |+|.++++..                                 +|++                                 
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  159 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED  159 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence            9999988642                                 2222                                 


Q ss_pred             -------------c-------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 -------------R-------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 -------------~-------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                   .       ....++.++||||||+++|||+++ +..||...+..+....+.........  ....+.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  236 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN-AAQPYSHLSDREVLNHVIKDQQVKLF--KPQLEL  236 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhhcccccC--CCccCC
Confidence                         0       011235689999999999999985 46788877766655544332211111  122234


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ..++.+.+++..|| .+|++||++.+|++.|.
T Consensus       237 ~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         237 PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            47788999999999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=1.5e-24  Score=172.67  Aligned_cols=170  Identities=30%  Similarity=0.597  Sum_probs=134.0

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      +.||+|++|.||+|.+.........||+|.+.        ..+.+|+.++++++|+||+++++.+.. ...+++|||+ +
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~-~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA-P   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec-C
Confidence            36899999999999986532234579999884        356789999999999999999999988 7889999999 9


Q ss_pred             cCCHHHHhhhC-------------------------------Cccc----------------------------------
Q psy796          109 LGDLVQHLNSA-------------------------------DNLT----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-------------------------------r~l~----------------------------------  123 (228)
                      +++|.+++...                               ++++                                  
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (257)
T cd05040          79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE  158 (257)
T ss_pred             CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence            99999988553                               1111                                  


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++||||||++++||+++ |..||...+..+....+....      .....+..++..+.
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  231 (257)
T cd05040         159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTY-GEEPWAGLSGSQILKKIDKEG------ERLERPEACPQDIY  231 (257)
T ss_pred             CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcC------CcCCCCccCCHHHH
Confidence                         1123457789999999999999985 358888777776655554311      12334556789999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      +++.+||+.+|.+||++.++++.|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.9e-25  Score=184.33  Aligned_cols=172  Identities=19%  Similarity=0.265  Sum_probs=136.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .++.||||+++          ..+.+|+.++..++|+||+++++++...+..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~   77 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKD---TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLY   77 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEE
Confidence            368899999999999999999875   67899999984          23567999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++|+|.+++...                             +||+                            
T Consensus        78 lv~E~~-~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  156 (364)
T cd05599          78 LIMEYL-PGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR  156 (364)
T ss_pred             EEECCC-CCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence            999999 999999988654                             2333                            


Q ss_pred             ------------------------------------------------------cccCCCCCccchHHHHHHHHHHHhcC
Q psy796          124 ------------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLC  149 (228)
Q Consensus       124 ------------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~  149 (228)
                                                                            .....++.++|||||||+++||++  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~--  234 (364)
T cd05599         157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV--  234 (364)
T ss_pred             ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc--
Confidence                                                                  012235778999999999999999  


Q ss_pred             CCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC---HHHHHHH
Q psy796          150 RDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT---FKQIYSF  213 (228)
Q Consensus       150 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps---~~~v~~~  213 (228)
                      |..||.+.+..+....+.....    ....+....+++++.+++.+|+. +|.+|++   +.+++.+
T Consensus       235 G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         235 GYPPFCSDNPQETYRKIINWKE----TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCC----ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            6799988877766555543221    11222333578999999999996 8999987   8888763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.93  E-value=1.7e-25  Score=184.77  Aligned_cols=172  Identities=20%  Similarity=0.301  Sum_probs=137.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|.+.+.||+|+||.||++....   .+..||+|.++          ..+.+|+.++..++|+||+++++++.+.+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~   77 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKA---TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLY   77 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEE
Confidence            358889999999999999998865   78899999985          23567889999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++|+|.+++.+.                              +||+                           
T Consensus        78 lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          78 LVMEYQ-PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             EEECCC-CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence            999999 999999988653                              2222                           


Q ss_pred             ------------------c------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------R------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------~------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                        .      ....++.++|||||||++|||++  |..||...+.......+.....    ....
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~--g~~Pf~~~~~~~~~~~i~~~~~----~~~~  230 (330)
T cd05601         157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIY--GRSPFHEGTSAKTYNNIMNFQR----FLKF  230 (330)
T ss_pred             ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeecc--CCCCCCCCCHHHHHHHHHcCCC----ccCC
Confidence                              0      03346688999999999999999  6799988776665555543211    1123


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +....++.++.+++..|++ +|.+||++.+++.+
T Consensus       231 ~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            3344678999999999998 99999999998864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=1.3e-25  Score=185.08  Aligned_cols=163  Identities=20%  Similarity=0.337  Sum_probs=133.0

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +.||+|+||.||++....   .+..||+|.++          ..+.+|++++..++|+||+++.+++..++..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~   77 (325)
T cd05594           1 KLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA   77 (325)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            368999999999998765   78899999884          23467888999999999999999999888999999999


Q ss_pred             cccCCHHHHhhhC------------------------------Cccc---------------------------------
Q psy796          107 AQLGDLVQHLNSA------------------------------DNLT---------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~------------------------------r~l~---------------------------------  123 (228)
                       ++|+|..++...                              +||+                                 
T Consensus        78 -~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (325)
T cd05594          78 -NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF  156 (325)
T ss_pred             -CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccc
Confidence             999998876543                              3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--G~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~~~~~~~l  226 (325)
T cd05594         157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHEKLFELILME--------EIRFPRTLSPEAKSL  226 (325)
T ss_pred             cCCcccCCHHHHccCCCCCccccccccceeeeecc--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHH
Confidence                       223457889999999999999999  67899887776665554322        234566789999999


Q ss_pred             HHHhhccCCCCCC-----CHHHHHHH
Q psy796          193 MCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      +.+||+.||++|+     ++.+++++
T Consensus       227 i~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         227 LSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            9999999999996     89998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.1e-25  Score=184.41  Aligned_cols=172  Identities=23%  Similarity=0.319  Sum_probs=138.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|.+.+.||+|+||.||++....   .+..||+|.++          ..+.+|+.++..++|+||+++++++.+.+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKD---TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLY   77 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEE
Confidence            358889999999999999999865   68899999984          23678999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||+ ++++|.+++...                             +||+                            
T Consensus        78 lv~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  156 (350)
T cd05573          78 LVMEYM-PGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD  156 (350)
T ss_pred             EEEcCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence            999999 999999988654                             2222                            


Q ss_pred             ---------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC
Q psy796          124 ---------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT  158 (228)
Q Consensus       124 ---------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~  158 (228)
                                                                   .....++.++|||||||++|||++  |..||...+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~Pf~~~~  234 (350)
T cd05573         157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY--GFPPFYSDT  234 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhcc--CCCCCCCCC
Confidence                                                         012346789999999999999999  678998887


Q ss_pred             hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC-HHHHHHH
Q psy796          159 NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT-FKQIYSF  213 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps-~~~v~~~  213 (228)
                      .......+.......    ..+....++.++.+++.+|++ +|.+||+ +.+++++
T Consensus       235 ~~~~~~~i~~~~~~~----~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         235 LQETYNKIINWKESL----RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHHHHHhccCCcc----cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            666655554421111    222333468999999999997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.93  E-value=4.1e-25  Score=205.58  Aligned_cols=181  Identities=20%  Similarity=0.326  Sum_probs=131.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---HHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      +...++||+|+||.||+|....   .+..||+|.++.   ...+|++.+++++||||++++|++.+....++||||+ ++
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~-~~  767 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIK---NGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI-EG  767 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECC---CCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC-CC
Confidence            4445689999999999998865   788999998852   2356789999999999999999999988999999999 99


Q ss_pred             CCHHHHhhhC-----------------------------Cccc-------------------------------------
Q psy796          110 GDLVQHLNSA-----------------------------DNLT-------------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~-----------------------------r~l~-------------------------------------  123 (228)
                      |+|.++++..                             ||++                                     
T Consensus       768 g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP  847 (968)
T PLN00113        768 KNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAP  847 (968)
T ss_pred             CcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCc
Confidence            9999877531                             3333                                     


Q ss_pred             --cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh--HHHHHHHHHhhhCCCc----cccCC----CCCCCcHHHHH
Q psy796          124 --RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN--EQVIQNAEHMYYGGEL----QVFLP----KPSLCPRDIYD  191 (228)
Q Consensus       124 --~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~l~~  191 (228)
                        .....++.++|||||||++|||++  |..||.....  .....+..........    ++...    .+.....++.+
T Consensus       848 E~~~~~~~~~~sDv~S~Gvvl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  925 (968)
T PLN00113        848 ETRETKDITEKSDIYGFGLILIELLT--GKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMN  925 (968)
T ss_pred             ccccCCCCCcccchhhHHHHHHHHHh--CCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHH
Confidence              223457889999999999999999  5577743221  1222222221111100    11111    11112346788


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      ++.+||+.+|++|||+.+|++.|+++..
T Consensus       926 l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        926 LALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            9999999999999999999999999844

>KOG0610|consensus

Probab=99.93  E-value=1.8e-25  Score=180.83  Aligned_cols=177  Identities=21%  Similarity=0.292  Sum_probs=149.8

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      +...+..++|++.+.||.|.-|.||++..+.   .+..+|+|++.          .+.+.|.++|+.+.||.+..+++.+
T Consensus        70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~---t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f  146 (459)
T KOG0610|consen   70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRG---TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF  146 (459)
T ss_pred             CCCccCHHHHHHHHHcCCCCceeEEEEEecC---CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee
Confidence            4566777888889999999999999999976   66899999994          2346689999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------  123 (228)
                      +.+...+++|||| +||+|+..+++.                               ||||                   
T Consensus       147 et~~~~cl~meyC-pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDL  225 (459)
T KOG0610|consen  147 ETDKYSCLVMEYC-PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDL  225 (459)
T ss_pred             eccceeEEEEecC-CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccc
Confidence            9999999999999 999999988765                               4444                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy796          124 --------------------------------------------------------------------------------  123 (228)
Q Consensus       124 --------------------------------------------------------------------------------  123 (228)
                                                                                                      
T Consensus       226 S~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE  305 (459)
T KOG0610|consen  226 SLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE  305 (459)
T ss_pred             cccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce
Confidence                                                                                            


Q ss_pred             -cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCC
Q psy796          124 -RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQT  202 (228)
Q Consensus       124 -~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~  202 (228)
                       +.++..+.++|.|+|||++|||++  |.+||.+.++.+.+.++....      ..++..+..+..+++||.+.|..||.
T Consensus       306 vI~G~GHgsAVDWWtfGIflYEmLy--G~TPFKG~~~~~Tl~NIv~~~------l~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  306 VIRGEGHGSAVDWWTFGIFLYEMLY--GTTPFKGSNNKETLRNIVGQP------LKFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             eeecCCCCchhhHHHHHHHHHHHHh--CCCCcCCCCchhhHHHHhcCC------CcCCCCCcchhHHHHHHHHHhccChh
Confidence             556677899999999999999999  679999999998888876421      14444456788999999999999999


Q ss_pred             CCCC----HHHHHH
Q psy796          203 MRPT----FKQIYS  212 (228)
Q Consensus       203 ~Rps----~~~v~~  212 (228)
                      +|..    +.+|-+
T Consensus       378 kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKR  391 (459)
T ss_pred             hhhccccchHHhhc
Confidence            9988    666655

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.93  E-value=1.5e-24  Score=175.86  Aligned_cols=168  Identities=24%  Similarity=0.365  Sum_probs=136.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .++.||+|.+.          ..+.+|+++++++.|+||+++++++......+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLY   77 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEE
Confidence            368889999999999999999875   67899999873          33678999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++++|.+++...                             ++|+                            
T Consensus        78 ~v~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  156 (290)
T cd05580          78 LVMEYV-PGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTY  156 (290)
T ss_pred             EEEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCC
Confidence            999999 999999988654                             1221                            


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   ......+.++||||||+++++|++  |..||...+.......+...        ....|...+..+.
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~  226 (290)
T cd05580         157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA--GYPPFFDDNPIQIYEKILEG--------KVRFPSFFSPDAK  226 (290)
T ss_pred             CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcC--------CccCCccCCHHHH
Confidence                         122345678999999999999999  67899877755555544322        2345667789999


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHH
Q psy796          191 DLMCDCWKRDQTMRP-----TFKQIYS  212 (228)
Q Consensus       191 ~li~~c~~~~p~~Rp-----s~~~v~~  212 (228)
                      +++.+||+.+|.+|+     ++.+++.
T Consensus       227 ~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         227 DLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHHHccCCHHHccCcccCCHHHHHc
Confidence            999999999999998     7777775

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=6.4e-25  Score=181.42  Aligned_cols=171  Identities=19%  Similarity=0.287  Sum_probs=131.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~   99 (228)
                      +|++.+.||+|+||.||++........+..||+|.++           ..+.+|+.++..+ +|+||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4788999999999999999875333367899999884           2356789999999 599999999999888889


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      +++|||+ ++|+|.+++...                             +||+                           
T Consensus        81 ~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          81 HLILDYV-SGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             EEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence            9999999 999999988654                             3333                           


Q ss_pred             ------------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH----HHHHHHHHhhhCCCccccCC
Q psy796          124 ------------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ------------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~  180 (228)
                                        .. ...++.++|||||||++|||++  |..||......    .+...+...        ..+
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ellt--g~~pf~~~~~~~~~~~~~~~~~~~--------~~~  229 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLT--GASPFTLEGERNTQSEVSRRILKC--------DPP  229 (332)
T ss_pred             CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhc--CCCCCCCCCCCCCHHHHHHHHhcC--------CCC
Confidence                              11 1236788999999999999999  66888643322    222222211        234


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .+..++.++.+++.+||+.||++||     ++++++++
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            4567889999999999999999999     77888764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.93  E-value=4.1e-25  Score=176.88  Aligned_cols=176  Identities=15%  Similarity=0.281  Sum_probs=133.1

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.++|.+.+.||+|+||.||++....   .+..|++|.++       ..+.+|+.+++.++|+||+++++.+...+..++
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVN---TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcC---CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence            34578888999999999999998765   67899999874       346789999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++++|.+++...                             ++|+                             
T Consensus        84 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          84 CMEFC-GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             EEecc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence            99999 999999887543                             2222                             


Q ss_pred             ---------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ---------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ---------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                     .   ....++.++|||||||++|||++  +..||...............   ....+.......+
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~--~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  237 (267)
T cd06645         163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE--LQPPMFDLHPMRALFLMTKS---NFQPPKLKDKMKW  237 (267)
T ss_pred             cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc--CCCCcccccchhhHHhhhcc---CCCCCcccccCCC
Confidence                           0   13346778999999999999999  55787655443322222111   1111111122346


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..+.+++.+||+.+|++||++.+|+.+
T Consensus       238 ~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         238 SNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            7889999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.93  E-value=6.8e-25  Score=187.79  Aligned_cols=183  Identities=16%  Similarity=0.192  Sum_probs=133.3

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCC--------
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGE--------   96 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~--------   96 (228)
                      .+..+|.+.+.||+|+||.||+|....   .+..||+|.+.   ....+|+.+++.++|+||+++++++...        
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICID---TSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            345678999999999999999998865   67899999884   3356799999999999999998876432        


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC---------------------------------Cccc--------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------  123 (228)
                      ...+++|||+ + ++|.+++...                                 |||+                    
T Consensus       140 ~~l~lvmE~~-~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        140 IFLNVVMEFI-P-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             eEEEEEEecC-C-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence            1356899999 7 5776655321                                 3444                    


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC----
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE----  174 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----  174 (228)
                                               .....++.++|||||||++|||++  |.+||.+.+..+....+........    
T Consensus       218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt--G~~pf~~~~~~~~~~~i~~~~~~p~~~~~  295 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMIL--GYPIFSGQSSVDQLVRIIQVLGTPTEDQL  295 (440)
T ss_pred             chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence                                     112357889999999999999999  6799988776554444332211000    


Q ss_pred             -----------cc------ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          175 -----------LQ------VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       175 -----------~~------~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                                 .+      .....|...+.++.+|+.+||+.+|.+|||+.++++  .++.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence                       00      001124457789999999999999999999999996  34444

>KOG0574|consensus

Probab=99.93  E-value=1.7e-27  Score=186.27  Aligned_cols=174  Identities=16%  Similarity=0.340  Sum_probs=145.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.+-|.+...||+|+||.||++.++.   .++.||||.+.     .++.+|+.++++...+++|+++|.+..++.+++||
T Consensus        31 PEEVFDi~~KLGEGSYGSV~KAIH~E---sG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   31 PEEVFDIVGKLGEGSYGSVHKAIHRE---SGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             hHHHHHHHHHhcCCcchHHHHHHHhc---cCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence            34556778899999999999999876   89999999994     66789999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| ..|++.+.++-+                              ||++                              
T Consensus       108 EYC-GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  108 EYC-GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             hhc-CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            999 999999987533                              3443                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    +....|+.++||||+|++..||..  |++||.+.-+....-.+     ....++.+..|..++.+.
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAE--G~PPYsDIHPMRAIFMI-----PT~PPPTF~KPE~WS~~F  259 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAE--GRPPYSDIHPMRAIFMI-----PTKPPPTFKKPEEWSSEF  259 (502)
T ss_pred             CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhc--CCCCcccccccceeEec-----cCCCCCCCCChHhhhhHH
Confidence                          556689999999999999999999  67999887765443222     123344555677789999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+|+-..|++|.|+.++++|
T Consensus       260 ~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  260 NDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHhhh
Confidence            999999999999999999998875

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=1.3e-24  Score=173.97  Aligned_cols=167  Identities=20%  Similarity=0.307  Sum_probs=125.0

Q ss_pred             eeecccceeeEEEEEEeccC---------CCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           37 ERLGSCHLGEMMICETEDIE---------LDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~---------~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      +.||+|+||.||+|.+....         .....|++|.+.       ..+.+|+.++..++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            36899999999999864211         123468999873       34677889999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++|+|..++...                              +||+                           
T Consensus        81 lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          81 MVEEFV-EFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEEecc-cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            999999 999998887642                              2222                           


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||+++ +..||......+..... ..        .....
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~~~~~~~~~-~~--------~~~~~  229 (262)
T cd05077         160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN-GEIPLKDKTLAEKERFY-EG--------QCMLV  229 (262)
T ss_pred             ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCcchhHHHHHH-hc--------CccCC
Confidence                                 1134467789999999999999864 46788765544332211 11        11222


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ...+.++.+|+.+||+.+|.+||++.+|++.|
T Consensus       230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            33467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.93  E-value=3.8e-24  Score=173.24  Aligned_cols=171  Identities=16%  Similarity=0.242  Sum_probs=133.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      |+..+.||+|+||.||++....   +++.||+|.+.          ..+.+|++++..++|+|++.+.+++..++..+++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRA---TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECC---CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEE
Confidence            5677899999999999998876   67899999873          2256799999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++...                               +|++                            
T Consensus        79 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05632          79 LTIM-NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES  157 (285)
T ss_pred             EEec-cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence            9999 999998877532                               2222                            


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++|+||||+++|||++  |..||...........+.......    ....+..++.+
T Consensus       158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~P~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  231 (285)
T cd05632         158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE--GQSPFRGRKEKVKREEVDRRVLET----EEVYSAKFSEE  231 (285)
T ss_pred             ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhhhcc----ccccCccCCHH
Confidence                           223456788999999999999999  678998776554433332221111    12235567889


Q ss_pred             HHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      +.+|+..||+.+|++||+     +.+++.+
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         232 AKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            999999999999999999     7788775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=1.6e-24  Score=172.09  Aligned_cols=173  Identities=39%  Similarity=0.769  Sum_probs=138.5

Q ss_pred             ceeeeeecccceeeEEEEEEeccC-CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIE-LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~-~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +++.+.||.|+||.||++...... .....||+|.++        ..+.+|+.++..++|+||+++++.+...+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            456789999999999999987521 124889999985        35778999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhCC-------------------------------ccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSAD-------------------------------NLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~r-------------------------------~l~-----------------------------  123 (228)
                      ||+ ++++|.+++....                               |++                             
T Consensus        81 e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       81 EYM-EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             ecc-CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            999 9999999886431                               111                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||+|++++||+++ +..||...+..+....+....       ....+..++.
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  231 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL-GESPYPGMSNEEVLEYLKKGY-------RLPKPENCPP  231 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHhcCC-------CCCCCCcCCH
Confidence                            1123467789999999999999986 368888877777666655432       3344566889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ++.+++.+||..+|++|||+.++++.|
T Consensus       232 ~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      232 EIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            999999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.93  E-value=3.1e-24  Score=172.01  Aligned_cols=172  Identities=28%  Similarity=0.492  Sum_probs=128.8

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      .||+|+||.||+|..... .....+++|.+.        ..+.+|+..++.++|+||+++++.+......+++|||+ ++
T Consensus         2 ~lg~G~fg~v~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~-~~   79 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRG-MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFC-PL   79 (269)
T ss_pred             cCCccCCceEEEEEEecC-CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeC-CC
Confidence            589999999999976432 245678999773        34678999999999999999999999888899999999 99


Q ss_pred             CCHHHHhhhC----------------------------------Cccc--------------------------------
Q psy796          110 GDLVQHLNSA----------------------------------DNLT--------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~----------------------------------r~l~--------------------------------  123 (228)
                      |+|.+++...                                  +|++                                
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK  159 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence            9999988543                                  2222                                


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||+++|||+++ +..||......+............  .+....+
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~  236 (269)
T cd05042         160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA-ADQPYPDLSDEQVLKQVVREQDIK--LPKPQLD  236 (269)
T ss_pred             CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC-CCCCCCcCCHHHHHHHHhhccCcc--CCCCccc
Confidence                                 0012346789999999999999996 467888776665544332221110  1011224


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ..++..+.+++..||. +|++|||+.+|++.|.
T Consensus       237 ~~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         237 LKYSDRWYEVMQFCWL-DPETRPTAEEVHELLT  268 (269)
T ss_pred             ccCCHHHHHHHHHHhc-CcccccCHHHHHHHhc
Confidence            4678899999999995 9999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=1.2e-24  Score=175.57  Aligned_cols=164  Identities=15%  Similarity=0.212  Sum_probs=123.0

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   .++.+|+|.+..          ....|++++.+++|+||+++++.+......+++|||+ +
T Consensus         1 lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~-~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKN---TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM-N   76 (277)
T ss_pred             CCCCCceEEEEEEEcc---CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC-C
Confidence            6999999999998876   688999998841          2356899999999999999999998888899999999 9


Q ss_pred             cCCHHHHhhhC-------------------------------Cccc----------------------------------
Q psy796          109 LGDLVQHLNSA-------------------------------DNLT----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-------------------------------r~l~----------------------------------  123 (228)
                      +++|.+++...                               +||+                                  
T Consensus        77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05607          77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAG  156 (277)
T ss_pred             CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCC
Confidence            99998877432                               2222                                  


Q ss_pred             ---------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 ---------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 ---------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                               .....++.++|||||||++|||++  |..||...........+........   .......++.++++++.
T Consensus       157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~  231 (277)
T cd05607         157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA--GRTPFKDHKEKVAKEELKRRTLEDE---VKFEHQNFTEESKDICR  231 (277)
T ss_pred             CCCccCHHHHccCCCCCchhHHHHHHHHHHHHh--CCCCCCCCcchhhHHHHHHHhhccc---cccccccCCHHHHHHHH
Confidence                     223457889999999999999999  5688876543211111111111111   11122457899999999


Q ss_pred             HhhccCCCCCCCHHHHH
Q psy796          195 DCWKRDQTMRPTFKQIY  211 (228)
Q Consensus       195 ~c~~~~p~~Rps~~~v~  211 (228)
                      +||+.+|++||++.+++
T Consensus       232 ~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         232 LFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHhccCHhhCCCCccch
Confidence            99999999999996654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=1.3e-24  Score=175.52  Aligned_cols=165  Identities=18%  Similarity=0.249  Sum_probs=125.6

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   ++..||+|.+.          ..+..|+.+++.++|+||+++.+++...+..+++|||+ +
T Consensus         1 lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~-~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRA---TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM-N   76 (280)
T ss_pred             CCCCCceeEEEEEEcc---CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC-C
Confidence            6999999999998876   77899999984          23467999999999999999999998888899999999 9


Q ss_pred             cCCHHHHhhhC---------------------------------Cccc--------------------------------
Q psy796          109 LGDLVQHLNSA---------------------------------DNLT--------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~---------------------------------r~l~--------------------------------  123 (228)
                      +|+|.+++...                                 +||+                                
T Consensus        77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (280)
T cd05608          77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG  156 (280)
T ss_pred             CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence            99998776321                                 2332                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  ..+..++.++||||||+++|||++  |..||...........+......    .....+..++.++.+
T Consensus       157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  230 (280)
T cd05608         157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA--ARGPFRARGEKVENKELKQRILN----DSVTYPDKFSPASKS  230 (280)
T ss_pred             cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh--CCCCCCCCCcchhHHHHHHhhcc----cCCCCcccCCHHHHH
Confidence                        223456789999999999999999  66888765432211111111110    022345668899999


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHHH
Q psy796          192 LMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ++.+||+.+|++||     ++++++++
T Consensus       231 li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         231 FCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             HHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            99999999999999     77888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.93  E-value=3.2e-24  Score=173.78  Aligned_cols=176  Identities=19%  Similarity=0.232  Sum_probs=128.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC---CCCCcceeeeeeeC----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL---QDPNLVSILGVCTG----   95 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l---~h~niv~~~g~~~~----   95 (228)
                      +|++.+.||+|+||.||++.....  .+..||+|.++         ..+.+|+.++..+   .|+||+++++++..    
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCC--CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            578889999999999999987431  46789999874         2456788777665   69999999998852    


Q ss_pred             -CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           96 -EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        96 -~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                       ....+++|||+ . ++|.+++...                               +||+                    
T Consensus        80 ~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T cd07862          80 RETKLTLVFEHV-D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  157 (290)
T ss_pred             CCCcEEEEEccC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence             34578999998 6 7888877532                               3333                    


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC---cc-
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE---LQ-  176 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~-  176 (228)
                                             .....++.++|||||||++|||++  +.+||.+.+..+....+........   .+ 
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~  235 (290)
T cd07862         158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  235 (290)
T ss_pred             EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc--CCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence                                   223457889999999999999999  6789988777665555543221000   00 


Q ss_pred             ----------ccCC-----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ----------VFLP-----KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ----------~~~~-----~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                ....     ....+++.+.+++.+||+.+|++|||+.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence                      0000     013467789999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=1.6e-24  Score=179.13  Aligned_cols=179  Identities=21%  Similarity=0.269  Sum_probs=129.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----   97 (228)
                      .|++.+.||+|+||.||+|....   .+..||+|.++         ..+.+|+.+++.++|+||+++++++...+     
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   77 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK   77 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECC---CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence            36788999999999999998765   67899999874         23678999999999999999999886432     


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ . ++|.+++...                             +||+                         
T Consensus        78 ~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~  155 (338)
T cd07859          78 DIYVVFELM-E-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN  155 (338)
T ss_pred             eEEEEEecC-C-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence            369999999 6 7888877543                             3333                         


Q ss_pred             ----------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------
Q psy796          124 ----------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------  173 (228)
Q Consensus       124 ----------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------  173 (228)
                                            ..  ...++.++|||||||++|||++  |..||.+.+.......+.......      
T Consensus       156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (338)
T cd07859         156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPGKNVVHQLDLITDLLGTPSPETIS  233 (338)
T ss_pred             ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence                                  00  1356788999999999999999  568897766543322221110000      


Q ss_pred             ------------CccccCC-----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 ------------ELQVFLP-----KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ------------~~~~~~~-----~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                  ......+     .-..++.++.+++.+||+.+|++|||+.+++++  +..+
T Consensus       234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence                        0000000     012467789999999999999999999999974  4444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.93  E-value=1.9e-24  Score=176.90  Aligned_cols=176  Identities=18%  Similarity=0.292  Sum_probs=133.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .++|.+.+.||+|+||.||+|....   .+..||+|.++        ..+.+|++++++++|+||+++++++..++..++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecC---CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence            3568889999999999999998765   67889999884        346789999999999999999999998889999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + ++|.+++...                              +||+                            
T Consensus        82 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          82 VFEYL-D-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             EEeCC-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            99998 7 5887776432                              2332                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC------------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE------------  174 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------  174 (228)
                                       .....++.++||||||++++||++  |..||.+.+..+....+........            
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS--GRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE  237 (309)
T ss_pred             ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence                             112346788999999999999999  5689987766554433332211000            


Q ss_pred             -----cccc-----CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 -----LQVF-----LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 -----~~~~-----~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                           .+..     ......++.++.+++.+|++.+|.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                 0000     0011346789999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=1.1e-24  Score=179.86  Aligned_cols=166  Identities=16%  Similarity=0.279  Sum_probs=125.6

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||++....   .+..||+|.++.          .+.+|+.++..+ +|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~   77 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK---TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF   77 (329)
T ss_pred             CeEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence            468999999999999876   688999999852          256788888888 799999999999999899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (329)
T cd05588          78 V-SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTF  156 (329)
T ss_pred             C-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccc
Confidence            9 999998887543                             2332                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-----HHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-----QVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                 ..+..++.++|||||||++|||++  |..||......     .....+.......    ....|..++.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~  230 (329)
T cd05588         157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA--GRSPFDIVGMSDNPDQNTEDYLFQVILEK----QIRIPRSLSV  230 (329)
T ss_pred             cCCccccCHHHHcCCCCCCccceechHHHHHHHHH--CCCCcccccccccccccchHHHHHHHHcC----CCCCCCCCCH
Confidence                       223456789999999999999999  66888632211     1111111111111    2335667889


Q ss_pred             HHHHHHHHhhccCCCCCCC------HHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPT------FKQIYS  212 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps------~~~v~~  212 (228)
                      ++.+++.+||+.+|.+|++      +.+++.
T Consensus       231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            9999999999999999987      667765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=9e-25  Score=177.59  Aligned_cols=173  Identities=18%  Similarity=0.316  Sum_probs=135.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .++|.+.+.||+|+||.||++....   .+..|++|.+.       ..+.+|+.+++.++|+|++++++.+...+..+++
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv   94 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV   94 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcC---CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence            3678888999999999999998654   67889999873       4578899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      +||+ ++++|.+++.+.                            ++++                               
T Consensus        95 ~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          95 MEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             EecC-CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence            9999 999999987653                            2222                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++||||||+++|++++  |..||...+.......+...   .  .+....+...+..+.
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~--g~~pf~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~l~  246 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLRALYLIATN---G--TPELQNPEKLSAIFR  246 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCChhhheeehhcC---C--CCCCCCccccCHHHH
Confidence                         112346788999999999999999  67899776554332222111   0  112233445678899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||..+|++||++.+++.+
T Consensus       247 ~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         247 DFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.93  E-value=2.9e-24  Score=170.82  Aligned_cols=169  Identities=20%  Similarity=0.361  Sum_probs=132.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-CCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-PPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-~~~l  101 (228)
                      .|++.+.||+|++|.||++....   .+..|++|.+.         ..+.+|++++++++|+|++++++.+...+ ..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT---DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC---CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence            37889999999999999998865   67889999873         34678999999999999999998876443 5689


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ ++++|.+++...                               +|++                           
T Consensus        78 v~e~~-~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          78 VMGFC-EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             Eeccc-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            99999 999999988642                               1222                           


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++||||||+++++|++  +..||...+.......+..+.       ....+...+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~--g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  227 (257)
T cd08223         157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT--LKHAFNAKDMNSLVYRIIEGK-------LPPMPKDYS  227 (257)
T ss_pred             CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHhcC-------CCCCccccC
Confidence                             122345678999999999999999  567888766655444443321       122345678


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++.+||+.+|.+||++.+++++
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=8.2e-25  Score=180.21  Aligned_cols=158  Identities=20%  Similarity=0.309  Sum_probs=126.3

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHH-HHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIR-FLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~-~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||++....   ++..||+|.+..          .+.+|.. +++.++|+||+++++.+...+..+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~   77 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKA---DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDY   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence            468999999999999875   788999999842          2334444 45778999999999999988899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus        78 ~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (323)
T cd05575          78 V-NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTF  156 (323)
T ss_pred             C-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccc
Confidence            9 999998887654                             2333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 ..+..++.++|||||||++|||++  |..||...+..+....+...        ....+...+.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (323)
T cd05575         157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLY--GLPPFYSRDTAEMYDNILNK--------PLRLKPNISVSARHL  226 (323)
T ss_pred             cCChhhcChhhhcCCCCCccccccccchhhhhhhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHH
Confidence                       233457889999999999999999  67999888777666655432        233455678999999


Q ss_pred             HHHhhccCCCCCCCHH
Q psy796          193 MCDCWKRDQTMRPTFK  208 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~  208 (228)
                      +.+||+.+|.+||++.
T Consensus       227 i~~~l~~~p~~R~~~~  242 (323)
T cd05575         227 LEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHhhcCHHhCCCCC
Confidence            9999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=1.6e-24  Score=181.80  Aligned_cols=182  Identities=17%  Similarity=0.258  Sum_probs=142.7

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      .....+..++|++.+.||+|+||.||++....   .+..+|+|.+.          ..+.+|+.++..++|+||++++++
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~  111 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA  111 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECC---CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            34566777899999999999999999998876   77899999873          235678999999999999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc---------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT---------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~---------------------  123 (228)
                      +...+..+++|||+ ++|+|.+++...                            |||+                     
T Consensus       112 ~~~~~~~~lv~Ey~-~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         112 FQDDRYLYMVMEYM-PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EEcCCEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            99888899999999 999999887653                            3333                     


Q ss_pred             ------------------------cc----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ------------------------RD----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ------------------------~~----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                              ..    ...++.++|||||||++|||++  |..||.+.+.......+......   
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~--G~~Pf~~~~~~~~~~~i~~~~~~---  265 (371)
T cd05622         191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV--GDTPFYADSLVGTYSKIMNHKNS---  265 (371)
T ss_pred             EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh--CCCCCCCCCHHHHHHHHHcCCCc---
Confidence                                    00    1126789999999999999999  67999887776666665432211   


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSFM  214 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~l  214 (228)
                       ...+.+..++.++++++..|+...+.+  |+++.+++++.
T Consensus       266 -~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         266 -LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             -ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence             123334568899999999999854443  78999998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0032|consensus

Probab=99.93  E-value=2.1e-24  Score=179.91  Aligned_cols=175  Identities=21%  Similarity=0.275  Sum_probs=148.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCC-CCCcceeeeeeeCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQ   97 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~   97 (228)
                      -...|++.+.||.|.||.||.+....   ++..+|+|.+.          ..+.+|+++|+++. ||||+.+.+++.+..
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~---tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~  109 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKS---TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD  109 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecC---CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence            34468888999999999999999986   68999999993          36789999999998 999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC----------------------------Cccc--------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT--------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------  123 (228)
                      ..++|||+| .||+|.+.+...                            ||++                          
T Consensus       110 ~~~lvmEL~-~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~  188 (382)
T KOG0032|consen  110 SVYLVMELC-EGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF  188 (382)
T ss_pred             eEEEEEEec-CCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence            999999999 999999988552                            3333                          


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....|+.++||||+||++|.|++  |.+||.+.+.......+..+..    .-..+..
T Consensus       189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~--G~~PF~~~~~~~~~~~i~~~~~----~f~~~~w  262 (382)
T KOG0032|consen  189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS--GVPPFWGETEFEIFLAILRGDF----DFTSEPW  262 (382)
T ss_pred             ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh--CCCCCcCCChhHHHHHHHcCCC----CCCCCCc
Confidence                                 444689999999999999999999  7799999887777766665532    1123345


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++..+++++..++..||..|+|+.++++|
T Consensus       263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  263 DDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            6789999999999999999999999999986

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=2.4e-24  Score=177.52  Aligned_cols=162  Identities=20%  Similarity=0.340  Sum_probs=131.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCC-CCCcceeeeeeeCCCCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQ-DPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~  100 (228)
                      +|++.+.||+|+||.||++....   ++..||+|+++.          .+..|+.++..+. |++|+++++++...+..+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLY   77 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEE
Confidence            46788999999999999998865   788999998842          2556788887775 677888999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||+ ++|+|.+++...                             +||+                            
T Consensus        78 lv~Ey~-~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~  156 (323)
T cd05615          78 FVMEYV-NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV  156 (323)
T ss_pred             EEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence            999999 999999887653                             2333                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++|||||||++|||++  |..||.+.+.......+...        ....|..++.
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--G~~pf~~~~~~~~~~~i~~~--------~~~~p~~~~~  226 (323)
T cd05615         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA--GQPPFDGEDEDELFQSIMEH--------NVSYPKSLSK  226 (323)
T ss_pred             cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCccCCH
Confidence                            223456889999999999999999  67899888777766665543        2345667889


Q ss_pred             HHHHHHHHhhccCCCCCCCH
Q psy796          188 DIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~  207 (228)
                      ++.+++.+||+.+|.+|++.
T Consensus       227 ~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         227 EAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHcccCHhhCCCC
Confidence            99999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.93  E-value=8.9e-25  Score=177.96  Aligned_cols=171  Identities=19%  Similarity=0.318  Sum_probs=134.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      .+|.+.+.||+|+||.||++....   .+..||+|.+.       ..+.+|+.+++.++|+|++++++++......+++|
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECC---CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            568888999999999999998754   67899999883       45678999999999999999999999888899999


Q ss_pred             eeccccCCHHHHhhhC----------------------------Cccc--------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA----------------------------DNLT--------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------------  123 (228)
                      ||+ ++++|.+++...                            +||+                                
T Consensus        96 e~~-~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~  174 (297)
T cd06656          96 EYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (297)
T ss_pred             ccc-CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence            999 999999887543                            2222                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++|+||||+++|+|++  |..||...+.......+...   .  .+....+..++..+.+
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~t--g~~pf~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~  247 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLRALYLIATN---G--TPELQNPERLSAVFRD  247 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCcchheeeeccC---C--CCCCCCccccCHHHHH
Confidence                        122346688999999999999999  66888765543222111110   0  1122345667889999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++.+||+.+|++||++.+++.
T Consensus       248 li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         248 FLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.3e-24  Score=172.79  Aligned_cols=174  Identities=18%  Similarity=0.384  Sum_probs=133.2

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCC---
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTGEQP---   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~---   98 (228)
                      +.++|++.+.||+|+||.||+|....   .+..+++|.+.      ..+.+|+.+++++ .|+||+++++++.....   
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKK---TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECC---CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            34678999999999999999998865   67889999874      5578899999998 79999999999976543   


Q ss_pred             ---CeEEEeeccccCCHHHHhhhC---------------------------------Cccc-------------------
Q psy796           99 ---PWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT-------------------  123 (228)
Q Consensus        99 ---~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~-------------------  123 (228)
                         .+++|||+ ++++|.+++...                                 ++++                   
T Consensus        81 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          81 DDQLWLVMELC-GGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             ceEEEEEEEcC-CCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence               79999999 999998887531                                 1111                   


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++++|++  |..||...........+....   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~---  234 (275)
T cd06608         160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD--GKPPLCDMHPMRALFKIPRNP---  234 (275)
T ss_pred             ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh--CCCCccccchHHHHHHhhccC---
Confidence                                          001235678999999999999999  678987665544433332211   


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                        .+....+..++.++.+++.+||..+|++|||+.+++++
T Consensus       235 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         235 --PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             --CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence              11222344577899999999999999999999999863

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.92  E-value=3.2e-24  Score=170.49  Aligned_cols=169  Identities=25%  Similarity=0.406  Sum_probs=132.5

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++..++||+|+||.||+|....   ++..|++|.+.            ..+.+|+++++.++|+|++++++++......+
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLD---DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLY   78 (258)
T ss_pred             ccccceeeecCCceEEEEEEcC---CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEE
Confidence            4566889999999999998865   67889999762            34778999999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhCC-----------------------------ccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSAD-----------------------------NLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~r-----------------------------~l~----------------------------  123 (228)
                      +++||+ ++++|.+++.+..                             +++                            
T Consensus        79 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          79 IFLELV-PGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             EEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence            999999 9999999886541                             111                            


Q ss_pred             ---------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ---------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ---------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                     ..... ++.++|+||||+++|+|++  |..||...........+....  .    ....+..++.
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~--~----~~~~~~~~~~  229 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT--GKPPWSQLEGVAAVFKIGRSK--E----LPPIPDHLSD  229 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh--CCCCcccCcHHHHHHHHHhcc--c----CCCcCCCcCH
Confidence                           11122 6788999999999999999  668887766444333332211  0    2234566789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+||++.+++.+
T Consensus       230 ~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         230 EAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            99999999999999999999999863

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.92  E-value=3.6e-24  Score=171.03  Aligned_cols=172  Identities=19%  Similarity=0.341  Sum_probs=135.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|+||.||+|....   ++..+++|.+.        ..+.+|+..++.++|+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv   77 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLP---NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV   77 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcC---CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence            367889999999999999998765   67889999873        4578899999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhhhC--------------------------------Cccc---------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA--------------------------------DNLT---------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~--------------------------------r~l~---------------------------  123 (228)
                      +|++ ++++|.+++...                                ++++                           
T Consensus        78 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          78 MPYL-SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG  156 (267)
T ss_pred             Eecc-CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence            9999 999999988542                                1111                           


Q ss_pred             ---------------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ---------------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ---------------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                           .. ...++.++|+||||++++||++  |..||...+............     ......
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~  229 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT--GAAPYSKYPPMKVLMLTLQND-----PPSLET  229 (267)
T ss_pred             cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh--CCCCccccChhhhHHHHhcCC-----CCCcCC
Confidence                                 11 1256788999999999999999  678998776654443332221     001111


Q ss_pred             ---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 ---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         ...++.++.+++.+||+.+|++||++.+|+.+
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence               23678899999999999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=2.2e-24  Score=174.67  Aligned_cols=170  Identities=19%  Similarity=0.265  Sum_probs=130.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      |+..+.||+|+||.||++....   .++.||+|.+.          ..+.+|+.++++++|+|++.+++.+...+..+++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcC---CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEE
Confidence            6778899999999999999876   78899999873          2356799999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ ++++|.+++...                               +|++                            
T Consensus        79 ~e~~-~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          79 LTLM-NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             EEec-CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            9999 999999887432                               2222                            


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++||||||+++|||++  |..||...................    ....+..++.+
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~--g~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  231 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA--GQSPFQQRKKKIKREEVERLVKEV----QEEYSEKFSPD  231 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh--CCCCCCCCCccchHHHHHhhhhhh----hhhcCccCCHH
Confidence                           123456788999999999999999  678997654321111111110000    12235567889


Q ss_pred             HHHHHHHhhccCCCCCCC-----HHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps-----~~~v~~  212 (228)
                      +.+++.+||+.+|++|||     +.+++.
T Consensus       232 ~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         232 ARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            999999999999999999     888886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=3.1e-24  Score=179.58  Aligned_cols=173  Identities=18%  Similarity=0.251  Sum_probs=134.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .++.||+|+++          ..+.+|+.++..++|+||+++++.+.+....+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~   77 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKD---TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLY   77 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEE
Confidence            468899999999999999998765   67899999984          23567999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc------------------c---------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------R---------  124 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------~---------  124 (228)
                      ++|||+ ++|+|.+++...                             |||+                  .         
T Consensus        78 lv~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          78 LIMEFL-PGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             EEEcCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence            999999 999999988654                             3333                  0         


Q ss_pred             ----------------------------------------------------ccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          125 ----------------------------------------------------DRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       125 ----------------------------------------------------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                                                                          .+..++.++|||||||++|||++  |..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~--G~~  234 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI--GYP  234 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh--CCC
Confidence                                                                02346788999999999999999  679


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhc--cCCCCCCCHHHHHHH
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWK--RDQTMRPTFKQIYSF  213 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~--~~p~~Rps~~~v~~~  213 (228)
                      ||.+.+.......+......    ..++....+++++++++.+++.  .++..||++++|++|
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~----~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         235 PFCSETPQETYKKVMNWKET----LIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCCCCCHHHHHHHHHcCcCc----ccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            99988877776666542111    1222233478899999987543  233356899999986

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=3.2e-24  Score=174.86  Aligned_cols=176  Identities=19%  Similarity=0.262  Sum_probs=133.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .+.|.+.+.||+|+||.||+|....   .+..||+|.++        ..+.+|+.+++.++|+||+++++++...+..++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcC---CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence            3568889999999999999998865   67899999884        346789999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + ++|.+++...                              +||+                            
T Consensus        82 v~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          82 VFEYL-D-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             EEecc-c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            99999 7 6888877542                              2222                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                       .....++.++||||||+++|||++  |.+||...+..+....+.........           
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST--GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  237 (301)
T ss_pred             cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence                             112235678999999999999999  56899877765544433332111000           


Q ss_pred             ccc--CC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          176 QVF--LP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       176 ~~~--~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ...  .+         ....++.++++++.+|++.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000  00         11346788999999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=1.9e-24  Score=174.39  Aligned_cols=175  Identities=15%  Similarity=0.221  Sum_probs=129.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.++||+|+||.||+|....   .+..||+|.+.        ..+.+|++++.+++|+||+++++.+...+..+++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLL---TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcC---CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence            357888999999999999998765   67889999873        3477899999999999999999999998889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------Cccc----------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------DNLT----------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------r~l~----------------------------------  123 (228)
                      |||+ ++++|..+..-.                         +||+                                  
T Consensus        78 ~e~~-~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (279)
T cd06619          78 TEFM-DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT  156 (279)
T ss_pred             EecC-CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence            9999 999886543211                         2232                                  


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH---HHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV---IQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                              .....++.++||||||+++|+|++  |..||........   ........... .. ........+.++.++
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l  232 (279)
T cd06619         157 NAYMAPERISGEQYGIHSDVWSLGISFMELAL--GRFPYPQIQKNQGSLMPLQLLQCIVDE-DP-PVLPVGQFSEKFVHF  232 (279)
T ss_pred             hhhcCceeecCCCCCCcchHHHHHHHHHHHHh--CCCCchhhcccccccchHHHHHHHhcc-CC-CCCCCCcCCHHHHHH
Confidence                    234457889999999999999999  5688865332110   00111111100 00 111123467889999


Q ss_pred             HHHhhccCCCCCCCHHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+||+.+|++||++++++++
T Consensus       233 i~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         233 ITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHhhCChhhCCCHHHHhcC
Confidence            999999999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0659|consensus

Probab=99.92  E-value=1.6e-24  Score=166.52  Aligned_cols=176  Identities=22%  Similarity=0.320  Sum_probs=138.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|...+.+|+|.||.||+|+...   +++.||||.++         ....||+..|+.++|+||+.+.++|...+.+.|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~---t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~l   78 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTE---TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSL   78 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecC---CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEE
Confidence            346667899999999999999876   88999999995         346899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      |+||+ + .+|...+++.                              ||++                            
T Consensus        79 VfEfm-~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   79 VFEFM-P-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             EEEec-c-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            99999 7 7888777654                              5655                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc--ccc------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL--QVF------  178 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~------  178 (228)
                                       +....|+..+||||.||++.||+.  +.+-|++.+.-+....+-+.......  .+.      
T Consensus       157 ~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELll--r~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd  234 (318)
T KOG0659|consen  157 IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLL--RVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD  234 (318)
T ss_pred             ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHc--cCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence                             445678999999999999999999  66777777776655554443221111  000      


Q ss_pred             ------CCCC------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 ------LPKP------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ------~~~~------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            .|.+      +.++.+..+++..+|..+|.+|.|++|.+++
T Consensus       235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                  1111      2256788999999999999999999999874

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=1.8e-24  Score=173.58  Aligned_cols=171  Identities=16%  Similarity=0.318  Sum_probs=130.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeCC------C
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTGE------Q   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~~------~   97 (228)
                      ..|++.+.||+|+||.||+|....   .++.||+|.+.      ..+.+|+.++.++ +|+|++++++++...      .
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcC---CCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            457778889999999999998865   67899999983      4578899999998 799999999998753      2


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ ++++|.+++...                               +|++                       
T Consensus        83 ~~~iv~e~~-~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          83 QLWLVMEFC-GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             EEEEEEEcC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            468999999 999999988653                               1111                       


Q ss_pred             ---------------------cc-----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 ---------------------RD-----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 ---------------------~~-----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                           ..     ...++.++|||||||++|||++  |..||...............      ..
T Consensus       162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~--g~~p~~~~~~~~~~~~~~~~------~~  233 (272)
T cd06637         162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE--GAPPLCDMHPMRALFLIPRN------PA  233 (272)
T ss_pred             ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh--CCCCccccCHHHHHHHHhcC------CC
Confidence                                 10     2346778999999999999999  56788765544333322211      00


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+..++.++.+++.+||+.+|.+|||+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            122344678899999999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.8e-24  Score=181.76  Aligned_cols=171  Identities=19%  Similarity=0.249  Sum_probs=134.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|.+.+.||+|+||.||++....   .+..||+|.+.          ..+.+|++++..++|+||+++++++.+.+..++
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~l   78 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKD---TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYL   78 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEE
Confidence            57889999999999999998865   78899999873          335779999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc------------------c----------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------R----------  124 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------~----------  124 (228)
                      +|||+ ++|+|.+++...                             |||+                  .          
T Consensus        79 v~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          79 IMEFL-PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             EEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            99999 999999887543                             3333                  0          


Q ss_pred             ---------------------------------------------------------------ccCCCCCccchHHHHHH
Q psy796          125 ---------------------------------------------------------------DRDRYTCQSNVWSFAVT  141 (228)
Q Consensus       125 ---------------------------------------------------------------~~~~~~~~~Dv~s~Gv~  141 (228)
                                                                                     ....++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence                                                                           01235788999999999


Q ss_pred             HHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCC---CCHHHHHHH
Q psy796          142 LWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMR---PTFKQIYSF  213 (228)
Q Consensus       142 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~R---ps~~~v~~~  213 (228)
                      +|||++  |..||.+.+..+....+.....    ....+....++.++++++.+|++ +|.+|   +++.+++++
T Consensus       238 l~ellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         238 MFECLI--GWPPFCSENSHETYRKIINWRE----TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhhhhc--CCCCCCCCCHHHHHHHHHccCC----ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            999999  6799988777665555543211    11223334578999999999998 66654   699998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG2345|consensus

Probab=99.92  E-value=3.1e-25  Score=168.92  Aligned_cols=183  Identities=18%  Similarity=0.335  Sum_probs=144.2

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .....|+.++|++.+.+|+|+|+.||++..-+   +++.+|+|.+.       +..++|++..++++||||++++++...
T Consensus        13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s---~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~   89 (302)
T KOG2345|consen   13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLS---TGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLR   89 (302)
T ss_pred             CCcEEEcCceEEEeeeecCCCceeeeeecccC---cccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHH
Confidence            46788999999999999999999999998655   78899999883       557899999999999999999988754


Q ss_pred             CC-----CCeEEEeeccccCCHHHHhhhC-----------------------------------Cccc------------
Q psy796           96 EQ-----PPWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT------------  123 (228)
Q Consensus        96 ~~-----~~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~------------  123 (228)
                      +.     ..||++.|. ..|+|.+.+...                                   +|++            
T Consensus        90 ~~~D~~~~~yll~Pyy-~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~  168 (302)
T KOG2345|consen   90 EEKDGKHEAYLLLPYY-KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP  168 (302)
T ss_pred             hhccCceeEEEEeehh-ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence            43     489999999 889999988654                                   4444            


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  -...-.+.++|||||||++|+|+.  +..||...-.
T Consensus       169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf--~~sPfe~~~~  246 (302)
T KOG2345|consen  169 VLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF--GESPFERIYQ  246 (302)
T ss_pred             EEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH--cCCcchHHhh
Confidence                                                        334457899999999999999999  6788863211


Q ss_pred             H--HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          160 E--QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       160 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .  .+.-.+..      .....|..+..++.+..++..|++.||.+||++.+++..++.+
T Consensus       247 ~GgSlaLAv~n------~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  247 QGGSLALAVQN------AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             cCCeEEEeeec------cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            0  01001111      0113344455899999999999999999999999999998875

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=1.7e-24  Score=181.71  Aligned_cols=175  Identities=18%  Similarity=0.262  Sum_probs=130.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----   97 (228)
                      +|++.+.||+|+||.||++....   ++..||+|.+.         ..+.+|+.++..++|+||+++++++...+     
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPR---DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECC---CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence            46788999999999999998755   78899999873         34678999999999999999999997765     


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++++||+ . ++|.+++...                             +||+                         
T Consensus        78 ~~~lv~e~~-~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          78 EIYVVTELM-Q-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             eEEEEeecc-c-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence            679999998 6 6777766433                             3333                         


Q ss_pred             --------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh-----------
Q psy796          124 --------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY-----------  171 (228)
Q Consensus       124 --------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~-----------  171 (228)
                                          . ....++.++|||||||+++||++  |..||.+.+..+....+.....           
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~  233 (372)
T cd07853         156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLG--RRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC  233 (372)
T ss_pred             CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHc--CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence                                0 11246788999999999999999  6789988776554443322110           


Q ss_pred             --------CCCc-cc----cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 --------GGEL-QV----FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 --------~~~~-~~----~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                              .... .+    ........++++.+++.+||+.||.+|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                    0000 00    001123457899999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.92  E-value=5e-24  Score=174.09  Aligned_cols=170  Identities=18%  Similarity=0.263  Sum_probs=132.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|++.+.||+|+||.||++....   .++.|++|.+.          ..+.+|+.++..++|+||+++++.+..++..++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   78 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKE---TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCM   78 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECC---CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEE
Confidence            57889999999999999998865   67899999874          235688999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++++|.+++...                             ++++                             
T Consensus        79 v~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          79 VMEYV-EGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             EEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence            99999 999999988653                             1111                             


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++|+||||+++|||++  |..||.+....+........... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~--g~~pf~~~~~~~~~~~~~~~~~~-  234 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV--GCVPFFGDTPEELFGQVISDDIE-  234 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcccC-
Confidence                                          011245678999999999999999  66899887776665554432110 


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                          ....+..++.++.+++.+||+.+|++||++..+.+
T Consensus       235 ----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  269 (305)
T cd05609         235 ----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFE  269 (305)
T ss_pred             ----CCCccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence                11122357899999999999999999999544443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2.1e-24  Score=182.20  Aligned_cols=178  Identities=19%  Similarity=0.297  Sum_probs=128.8

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +....|++.+.||+|+||.||++....   .++.||+|... ..+.+|++++++++|+||+++++++......++++|++
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~---~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNK---TCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECC---CCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            445679999999999999999998876   78899999875 55789999999999999999999998888899999998


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       . ++|.+++...                             |||+                                  
T Consensus       166 -~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~  243 (391)
T PHA03212        166 -K-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW  243 (391)
T ss_pred             -C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccc
Confidence             5 7888776543                             3333                                  


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-------hHHHHHHHHHh----------------
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-------NEQVIQNAEHM----------------  169 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-------~~~~~~~~~~~----------------  169 (228)
                                 .....++.++|||||||++|||++|  ..||....       .......+...                
T Consensus       244 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg--~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~  321 (391)
T PHA03212        244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC--HDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL  321 (391)
T ss_pred             cCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHC--CCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence                       2234578899999999999999995  44543221       11111111100                


Q ss_pred             -------hhCCCccc-cCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          170 -------YYGGELQV-FLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       170 -------~~~~~~~~-~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                             .......+ ..+.   ....+.++.+++.+||+.||.+|||+.++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                   00000000 0000   0124668999999999999999999999996

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=2.2e-24  Score=180.85  Aligned_cols=179  Identities=17%  Similarity=0.265  Sum_probs=140.7

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.+.||+|+||.||++....   .+..+|+|.+.          ..+.+|+.+++.++|+||+++++++.
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~  113 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKS---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ  113 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            445566789999999999999999999875   67899999874          23568999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------------  123 (228)
                      +++..+++|||+ ++|+|.+++...                            |||+                       
T Consensus       114 ~~~~~~lv~Ey~-~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         114 DDKYLYMVMEYM-PGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             cCCEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence            998999999999 999999988653                            3343                       


Q ss_pred             ----------------------cc----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 ----------------------RD----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 ----------------------~~----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                            ..    ...++.++|||||||++|||++  |..||.+.+.......+.....    ..
T Consensus       193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~--G~~Pf~~~~~~~~~~~i~~~~~----~~  266 (370)
T cd05621         193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV--GDTPFYADSLVGTYSKIMDHKN----SL  266 (370)
T ss_pred             ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCc----cc
Confidence                                  00    1126789999999999999999  6799988777666655543221    11


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                      ..+....++..+++++..|++.++.+  |+++.++++|
T Consensus       267 ~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         267 NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            22333456899999999999865543  8999999886

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.92  E-value=2.9e-24  Score=175.64  Aligned_cols=172  Identities=22%  Similarity=0.399  Sum_probs=133.2

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +...|...+.||+|+||.||+|....   .+..|++|.+.          .++.+|++++..++|+|++++++++...+.
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~   89 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHT   89 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcC---CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCe
Confidence            34557888999999999999998865   67899999873          347789999999999999999999999888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++++||+ + |++.+++...                              ++++                         
T Consensus        90 ~~lv~e~~-~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607          90 AWLVMEYC-L-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             EEEEHHhh-C-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            99999998 7 6776665422                              1222                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++|||++  |..||...+.......+....     . ....+..+
T Consensus       168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t--g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~  239 (307)
T cd06607         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQND-----S-PTLSSNDW  239 (307)
T ss_pred             CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc--CCCCCCCccHHHHHHHHhcCC-----C-CCCCchhh
Confidence                              013457789999999999999999  668888766655443332210     0 11123457


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|++||++.+|+.+
T Consensus       240 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         240 SDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            8899999999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG2052|consensus

Probab=99.92  E-value=2.4e-25  Score=181.52  Aligned_cols=183  Identities=21%  Similarity=0.391  Sum_probs=137.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhh--CCCCCcceeeeeeeCCC----CCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSS--LQDPNLVSILGVCTGEQ----PPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~--l~h~niv~~~g~~~~~~----~~~  100 (228)
                      +.+.+.+.||+|.||.|++|+|     .|..||||++.    ..|.+|.++.+.  ++|+||+.|++....++    .++
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~w-----rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRW-----RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             heeEEEEEecCccccceeeccc-----cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            3588999999999999999999     68999999994    568999998876  49999999999887654    578


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------------Cccc---------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------------DNLT---------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------------r~l~---------------------  123 (228)
                      ||++|. +.|+|+|||.+.                                    ||||                     
T Consensus       286 LvTdYH-e~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  286 LVTDYH-EHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  364 (513)
T ss_pred             Eeeecc-cCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence            999999 999999999887                                    5666                     


Q ss_pred             -------------------------------cccCCCC--CccchHHHHHHHHHHHhcCC--------CCCCCCCChH-H
Q psy796          124 -------------------------------RDRDRYT--CQSNVWSFAVTLWEILSLCR--------DKPFPHLTNE-Q  161 (228)
Q Consensus       124 -------------------------------~~~~~~~--~~~Dv~s~Gv~l~el~~~~~--------~~p~~~~~~~-~  161 (228)
                                                     ++...|.  ..+||||||.++||+...+-        ..||.+.-+. -
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP  444 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP  444 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence                                           1122222  44899999999999875321        4577664322 2


Q ss_pred             HHHHHHHhhhCCCccccCCC-CCCC--cHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          162 VIQNAEHMYYGGELQVFLPK-PSLC--PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      ....+.....-.+.++..+. ....  -..+..+|..||..+|..|.|+-.|-+.|.++.+
T Consensus       445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            23334433333333333332 2222  2467889999999999999999999999999854

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=5.7e-24  Score=170.68  Aligned_cols=171  Identities=19%  Similarity=0.284  Sum_probs=130.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +...+.||+|+||.||+|....   .+..||+|.++                 +.+.+|+.++..++|+|++++++++..
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   79 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVT---TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT   79 (272)
T ss_pred             eeecceecccCceEEEEEeecC---CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc
Confidence            4567899999999999998764   67899999763                 236779999999999999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      .+..+++|||+ ++++|.+++...                             +|++                       
T Consensus        80 ~~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          80 EEYLSIFLEYV-PGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             CCceEEEEecC-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            88999999999 999999987653                             1121                       


Q ss_pred             -----------------------ccc--CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -----------------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -----------------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                             ...  ..++.++||||||++++|+++  |..||...........+.....    ...
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~----~~~  232 (272)
T cd06629         159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA--GRRPWSDEEAIAAMFKLGNKRS----APP  232 (272)
T ss_pred             cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh--CCCCCcCcchHHHHHHhhcccc----CCc
Confidence                                   011  136788999999999999999  5688865554433322221111    001


Q ss_pred             CC--CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LP--KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~--~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+  ....++.++.+++.+||+.+|.+||++.+|+++
T Consensus       233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            11  123468899999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0579|consensus

Probab=99.92  E-value=3.7e-26  Score=193.57  Aligned_cols=173  Identities=21%  Similarity=0.362  Sum_probs=146.1

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++..+++..||.|.||+||++.-+.   .+...|.|.+.       +++.-||++|....||+|+++++.+.-++.++|+
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nke---t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil  107 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKE---TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL  107 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhccc---chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence            3445678899999999999998764   56677888883       6788999999999999999999999888899999


Q ss_pred             EeeccccCCHHHHhh--------------------------hC----Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLN--------------------------SA----DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~--------------------------~~----r~l~-----------------------------  123 (228)
                      .||| .||-++..+-                          ..    |||+                             
T Consensus       108 iEFC-~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  108 IEFC-GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             Eeec-CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence            9999 9888866432                          21    4444                             


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          ....+|+.++||||||++|.||..  +.+|....++..++..+...-     ++.+..|+
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq--iEPPHhelnpMRVllKiaKSe-----PPTLlqPS  259 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ--IEPPHHELNPMRVLLKIAKSE-----PPTLLQPS  259 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc--cCCCccccchHHHHHHHhhcC-----CCcccCcc
Confidence                                667789999999999999999999  679999999998887776542     33566789


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++..+.+++..|+..+|..||++.++++|
T Consensus       260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  260 HWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             hhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            999999999999999999999999999874

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.92  E-value=6.5e-24  Score=169.82  Aligned_cols=171  Identities=18%  Similarity=0.308  Sum_probs=130.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCC-
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGE-   96 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~-   96 (228)
                      +.+|++.+.||+|+||.||.+....   .+..|++|.+.            ..+.+|++++.+++|+||+++++++.+. 
T Consensus         1 ~~~~~~~~~l~~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   77 (265)
T cd06652           1 PTNWRLGKLLGQGAFGRVYLCYDAD---TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM   77 (265)
T ss_pred             CCcceEeeEEecCCceEEEEEEEcC---CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC
Confidence            3578899999999999999998765   67899999763            2467799999999999999999988664 


Q ss_pred             -CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           97 -QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        97 -~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                       ...+++|||+ ++++|.+++...                             ++|+                       
T Consensus        78 ~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          78 ERTLSIFMEHM-PGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             CceEEEEEEec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence             3568999999 999999988553                             1111                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              ..+..++.++||||||+++|||++  |..||...............   ..   ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~---~~---~~  228 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT--EKPPWAEFEAMAAIFKIATQ---PT---NP  228 (265)
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhh--CCCCCCccchHHHHHHHhcC---CC---CC
Confidence                                    122345778999999999999999  56888766544333222211   10   22


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..|...+..+.+++.+||. +|++||++++|+++
T Consensus       229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            2355677889999999995 89999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.92  E-value=2.1e-24  Score=178.33  Aligned_cols=167  Identities=16%  Similarity=0.277  Sum_probs=124.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   .++.||+|.++.          .+.+|+.++.++ +|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   77 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK---TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY   77 (329)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence            468999999999998875   678999999852          256788888776 799999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (329)
T cd05618          78 V-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF  156 (329)
T ss_pred             C-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccc
Confidence            9 999998877543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-----HHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-----EQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                 ..+..++.++||||||+++|||++  |..||.....     ......+.......    ....|..++.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~----~~~~p~~~~~  230 (329)
T cd05618         157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK----QIRIPRSLSV  230 (329)
T ss_pred             cCCccccCHHHHcCCCCCCccceecccHHHHHHhh--CCCCCccCCCcCCcccccHHHHHHHHhcC----CCCCCCCCCH
Confidence                       223456789999999999999999  5688853211     11111111111111    2345677889


Q ss_pred             HHHHHHHHhhccCCCCCCC------HHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPT------FKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps------~~~v~~~  213 (228)
                      ++.+++.+||+.||.+||+      +.++++|
T Consensus       231 ~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         231 KAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            9999999999999999998      4566543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.92  E-value=6.2e-24  Score=171.97  Aligned_cols=170  Identities=18%  Similarity=0.309  Sum_probs=133.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      .+...+.||+|++|.||++....   .+..+++|.++       ..+.+|+.++..+.|+||+++++++...+..++++|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e   96 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKS---TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME   96 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence            45556899999999999998765   67889999873       346789999999999999999999988888999999


Q ss_pred             eccccCCHHHHhhhC----------------------------Cccc---------------------------------
Q psy796          105 YPAQLGDLVQHLNSA----------------------------DNLT---------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~----------------------------r~l~---------------------------------  123 (228)
                      |+ ++++|.+++...                            ++|+                                 
T Consensus        97 ~~-~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  175 (285)
T cd06648          97 FL-EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL  175 (285)
T ss_pred             cc-CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence            99 999999887543                            2222                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||++++||++  |..||...+.......+....     .+....+..++..+.++
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l  248 (285)
T cd06648         176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD--GEPPYFNEPPLQAMKRIRDNL-----PPKLKNLHKVSPRLRSF  248 (285)
T ss_pred             cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHh--CCCCCcCCCHHHHHHHHHhcC-----CCCCcccccCCHHHHHH
Confidence                       112356788999999999999999  568887766555544443321     11222344578899999


Q ss_pred             HHHhhccCCCCCCCHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~  212 (228)
                      +.+||+.+|++||++.++++
T Consensus       249 i~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         249 LDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHcccChhhCcCHHHHcc
Confidence            99999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=8.8e-24  Score=171.16  Aligned_cols=174  Identities=24%  Similarity=0.337  Sum_probs=128.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~l  101 (228)
                      +|+..+.||.|++|.||++....   .+..+++|.+.        ..+.+|++++++++|+||+++++++...  +..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKN---TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECC---CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence            57888999999999999999875   67899999874        4578999999999999999999988654  35799


Q ss_pred             EEeeccccCCHHHHhhhC---------------------------------Cccc-------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA---------------------------------DNLT-------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~---------------------------------r~l~-------------------------  123 (228)
                      +|||+ ++++|.+++...                                 ++++                         
T Consensus        79 v~e~~-~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          79 AMEYC-EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EEEec-CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            99999 999998876431                                 1111                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-----hHHHHHHHHHhhhCCCccccCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-----NEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                       .....++.++||||||+++|||++  |..||....     ..+....+...... ........
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  234 (287)
T cd06621         158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQ--NRFPFPPEGEPPLGPIELLSYIVNMPNP-ELKDEPGN  234 (287)
T ss_pred             cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCcccCCCCChHHHHHHHhcCCch-hhccCCCC
Confidence                             223456789999999999999999  567886542     22333332221100 00000000


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ....++++.+++.+||+.+|.+|||+.++++
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            1234678999999999999999999999997

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4279|consensus

Probab=99.92  E-value=1.1e-25  Score=192.34  Aligned_cols=165  Identities=23%  Similarity=0.353  Sum_probs=136.5

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchHH-------HHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD-------SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~-------~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      -+||+|.+|+||.|+..+   +..++|||.+.+.       +-.|+.+=+.++|.|||+++|.+..+..+-|.||.+ +|
T Consensus       581 vVLGKGTYG~VYA~RD~~---tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqV-PG  656 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMD---TQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQV-PG  656 (1226)
T ss_pred             EEeecCceeEEEeecccc---ceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecC-CC
Confidence            379999999999999876   7788999999522       567888888999999999999998888888999999 99


Q ss_pred             CCHHHHhhhC--------------------------------Cccc----------------------------------
Q psy796          110 GDLVQHLNSA--------------------------------DNLT----------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~--------------------------------r~l~----------------------------------  123 (228)
                      |+|.+.|...                                ||++                                  
T Consensus       657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF  736 (1226)
T KOG4279|consen  657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF  736 (1226)
T ss_pred             CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence            9999988765                                4554                                  


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....|+.++|||||||++.||.|  |++||......+..-.-...     ....++.|..++.+.+
T Consensus       737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT--GrPPF~ElgspqAAMFkVGm-----yKvHP~iPeelsaeak  809 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT--GRPPFVELGSPQAAMFKVGM-----YKVHPPIPEELSAEAK  809 (1226)
T ss_pred             ccchhhhChHhhccCCcCCCchhhhhhccceeEeecc--CCCCeeecCChhHhhhhhcc-----eecCCCCcHHHHHHHH
Confidence                         334468999999999999999999  67999887766543222211     1224566888999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++|.+|+.++|.+||++.++++
T Consensus       810 ~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  810 NFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHcCCCcccCccHHHhcc
Confidence            9999999999999999999986

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=9.8e-24  Score=171.08  Aligned_cols=174  Identities=20%  Similarity=0.358  Sum_probs=132.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeCCC----
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTGEQ----   97 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~----   97 (228)
                      ..++|.+.+.||+|+||.||++....   .+..+|+|.+.      ..+.+|+.++.++ +|+|++++++++...+    
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~---~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~   96 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKK---DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG   96 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECC---CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence            45779999999999999999998865   67899999884      4567899999988 7999999999986532    


Q ss_pred             -CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc--------------------
Q psy796           98 -PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------  123 (228)
Q Consensus        98 -~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------  123 (228)
                       ..+++|||+ ++++|.++++..                                 ++++                    
T Consensus        97 ~~~~lv~ey~-~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~  175 (291)
T cd06639          97 GQLWLVLELC-NGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS  175 (291)
T ss_pred             CeeEEEEEEC-CCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence             479999999 999999877521                                 1222                    


Q ss_pred             ------------------------cc-----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 ------------------------RD-----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ------------------------~~-----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                              ..     ...++.++|||||||++|||++  |..||...........+....    
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~--g~~p~~~~~~~~~~~~~~~~~----  249 (291)
T cd06639         176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD--GDPPLFDMHPVKTLFKIPRNP----  249 (291)
T ss_pred             hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh--CCCCCCCCcHHHHHHHHhcCC----
Confidence                                    00     1125789999999999999999  668888766544433332211    


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       .+....+...+.++.+++.+||+.+|++||++.+++++
T Consensus       250 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         250 -PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             -CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence             11222344567889999999999999999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.92  E-value=2.9e-24  Score=173.50  Aligned_cols=176  Identities=19%  Similarity=0.281  Sum_probs=130.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||+|....   .+..||+|.+.         +.+.+|++++..++|+||+++++++......+++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   78 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKE---TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV   78 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECC---CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence            57888999999999999999865   67899999873         3467899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      +||+ ++++|..+....                             ++++                              
T Consensus        79 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          79 FEFV-DHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             EecC-CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence            9999 888887765432                             1111                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC---------------
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG---------------  173 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~---------------  173 (228)
                                     .....++.++||||||+++|||++  |.+||...+..+....+.......               
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT--GEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA  235 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHc--CCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence                           011235678999999999999999  568887655443333332211100               


Q ss_pred             -CccccC-------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 -ELQVFL-------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 -~~~~~~-------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ...+..       .....++..+.+++.+||+.+|++||++.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence             000000       0123567889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.92  E-value=3.7e-24  Score=180.24  Aligned_cols=171  Identities=20%  Similarity=0.274  Sum_probs=134.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .|+.++.||+|+||.||+|....   .+..||+|.+.          ..+.+|+.++.+++|+||+++++.+.+.+..++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~l   78 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVD---TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF   78 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEE
Confidence            57889999999999999998865   67899999984          246789999999999999999999999989999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc------------------c----------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------R----------  124 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------~----------  124 (228)
                      ||||+ ++|+|.+++.+.                             |||+                  .          
T Consensus        79 v~E~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          79 VMDYI-PGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             EEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence            99999 999999988643                             3333                  0          


Q ss_pred             ---------------------------------------------------------------ccCCCCCccchHHHHHH
Q psy796          125 ---------------------------------------------------------------DRDRYTCQSNVWSFAVT  141 (228)
Q Consensus       125 ---------------------------------------------------------------~~~~~~~~~Dv~s~Gv~  141 (228)
                                                                                     ....++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  237 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  237 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence                                                                           11246778999999999


Q ss_pred             HHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC---HHHHHHH
Q psy796          142 LWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT---FKQIYSF  213 (228)
Q Consensus       142 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps---~~~v~~~  213 (228)
                      +|||++  |..||.+.+..+....+.....    ....+....++.++.+++.+++ .+|.+|++   +.++++|
T Consensus       238 l~ellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         238 LYEMLV--GQPPFLAQTPLETQMKVINWQT----SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHHHHh--CCCCCCCCCHHHHHHHHHccCC----CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            999999  6799988777655544433211    1122333567889999998875 48999987   8887763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=5.7e-24  Score=170.32  Aligned_cols=170  Identities=20%  Similarity=0.331  Sum_probs=129.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCC--
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGE--   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~--   96 (228)
                      -+|+..+.||+|+||.||++....   .+..|++|.+.            ..+.+|+.++++++|+||+++++++...  
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   78 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVD---TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE   78 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcC---CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence            357888999999999999998765   67899999773            3467899999999999999999988653  


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      ...++++||+ ++++|.+++...                             ++++                        
T Consensus        79 ~~~~l~~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~  157 (266)
T cd06651          79 KTLTIFMEYM-PGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  157 (266)
T ss_pred             CEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence            4568999999 999999888643                             1111                        


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             ..+..++.++||||||+++|||++  |..||................      ....
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~--g~~pf~~~~~~~~~~~~~~~~------~~~~  229 (266)
T cd06651         158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT--EKPPWAEYEAMAAIFKIATQP------TNPQ  229 (266)
T ss_pred             cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH--CCCCccccchHHHHHHHhcCC------CCCC
Confidence                                   112335678999999999999999  568998765544333222111      0223


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+..+++.+++++ +||..+|++||++.+|+++
T Consensus       230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         230 LPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            3556788899998 6888999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.92  E-value=7.7e-24  Score=170.94  Aligned_cols=175  Identities=21%  Similarity=0.283  Sum_probs=129.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|++|.||+|....   .+..|++|.++         ..+.+|+.++.+++|+|++++++++..++..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKK---TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLI   77 (285)
T ss_pred             CceEeeEecccCceEEEEEEECC---CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEE
Confidence            46788999999999999998865   67899999874         3478899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC--------------------------------Cccc---------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA--------------------------------DNLT---------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~--------------------------------r~l~---------------------------  123 (228)
                      |||+ + ++|.+++...                                ++++                           
T Consensus        78 ~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          78 FEFL-S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             EecC-C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            9999 7 6888776432                                1222                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC-----------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE-----------  174 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------  174 (228)
                                        .....++.++||||||++++||++  +.+||.+.+................           
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT--KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP  233 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence                              111235778999999999999999  5688876554322211111000000           


Q ss_pred             -ccc---------cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 -LQV---------FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 -~~~---------~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ...         .......++.++.+++.+||+.||.+|||+.+|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence             000         001123478899999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.92  E-value=5.4e-24  Score=172.19  Aligned_cols=174  Identities=20%  Similarity=0.353  Sum_probs=137.3

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ....|+..+.||+|++|.||++....   .+..|++|.++      ..+.+|++.+..++|+|++++++++...+..+++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRA---TGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEcc---CCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence            34557777899999999999999875   57889999884      4578899999999999999999999998999999


Q ss_pred             EeeccccCCHHHHhhhCC-ccc----------------------------------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSAD-NLT----------------------------------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~r-~l~----------------------------------------------------------  123 (228)
                      +||+ ++++|.+++.... .+.                                                          
T Consensus        94 ~e~~-~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          94 MEYM-DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             Eecc-CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            9999 9999999987542 111                                                          


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++||||||+++|+|++  |..||...+.......+....     ......+..++.+
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  245 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAE--GEPPYLREPPLRALFLITTKG-----IPPLKNPEKWSPE  245 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcC-----CCCCcchhhCCHH
Confidence                           112346789999999999999999  668887766654443332211     1122234457899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+++.+||+.+|.+||++.+++.+
T Consensus       246 l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         246 FKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhhC
Confidence            9999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.92  E-value=1.4e-23  Score=175.33  Aligned_cols=177  Identities=19%  Similarity=0.187  Sum_probs=127.9

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|++.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++..++|+||+++++++....   
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTV---LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcC---CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence            3568899999999999999998765   68899999883         34678999999999999999999986543   


Q ss_pred             ---CCeEEEeeccccCCHHHHhhhC---------------------------Cccc------------------------
Q psy796           98 ---PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------------  123 (228)
Q Consensus        98 ---~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------------  123 (228)
                         ..+++|||+ . ++|.+.+...                           +||+                        
T Consensus        97 ~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          97 EFQDVYLVMELM-D-ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             ccceeEEEEeCC-C-cCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence               468999998 6 5565543321                           3333                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh-------------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY-------------  171 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~-------------  171 (228)
                                         ..+..++.++||||||+++|||++  |..||.+.+....+..+.....             
T Consensus       175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (359)
T cd07876         175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK--GSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT  252 (359)
T ss_pred             cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence                               233457889999999999999999  6789987665433222111100             


Q ss_pred             -----CCCcc-cc---------------CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 -----GGELQ-VF---------------LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 -----~~~~~-~~---------------~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                           ..... ..               .......+.++++++.+||+.||++|||+.+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence                 00000 00               00111245789999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.92  E-value=8.2e-24  Score=170.80  Aligned_cols=177  Identities=19%  Similarity=0.318  Sum_probs=132.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||++....   ++..||+|.+.         +.+.+|+.++.+++|+|++++++++...+..++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRE---TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECC---CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEE
Confidence            357888999999999999998865   67899999773         346789999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ +++.|..++...                             ++|+                             
T Consensus        78 v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  156 (286)
T cd07847          78 VFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD  156 (286)
T ss_pred             EEecc-CccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence            99999 888777765432                             2222                             


Q ss_pred             ---------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------Cc-
Q psy796          124 ---------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------EL-  175 (228)
Q Consensus       124 ---------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~-  175 (228)
                                     . ....++.++||||||+++|||++  |..||.+.+..+....+.......           .. 
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd07847         157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT--GQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF  234 (286)
T ss_pred             ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence                           0 11346789999999999999999  569998776654443332211100           00 


Q ss_pred             -cccCCC----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -QVFLPK----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~~~~~~----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....+.          -...+..+.+++.+||+.+|++||++.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence             000000          12457889999999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.92  E-value=2.1e-24  Score=181.28  Aligned_cols=172  Identities=20%  Similarity=0.260  Sum_probs=135.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.+.          ..+.+|++++..++|+||+++++.+..++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~   77 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVD---TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLY   77 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEE
Confidence            368899999999999999998765   68899999884          23678999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc------------------c---------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------R---------  124 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------~---------  124 (228)
                      ++|||+ ++|+|.+++...                             |||+                  .         
T Consensus        78 lv~E~~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~  156 (376)
T cd05598          78 FVMDYI-PGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (376)
T ss_pred             EEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence            999999 999999988653                             3333                  0         


Q ss_pred             ------------------------------------------------------------ccCCCCCccchHHHHHHHHH
Q psy796          125 ------------------------------------------------------------DRDRYTCQSNVWSFAVTLWE  144 (228)
Q Consensus       125 ------------------------------------------------------------~~~~~~~~~Dv~s~Gv~l~e  144 (228)
                                                                                  ....++.++|||||||++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  236 (376)
T cd05598         157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  236 (376)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence                                                                        01235678999999999999


Q ss_pred             HHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCC---CHHHHHHH
Q psy796          145 ILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRP---TFKQIYSF  213 (228)
Q Consensus       145 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rp---s~~~v~~~  213 (228)
                      |++  |..||.+.+..+....+.....    ....+....++.++.+++.+|+ .+|.+|+   ++.+++.+
T Consensus       237 ll~--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         237 MLV--GQPPFLADTPAETQLKVINWET----TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             hhh--CCCCCCCCCHHHHHHHHhccCc----cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            999  6799988776655444432211    1122334467899999999976 5999999   89999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=3.2e-24  Score=174.75  Aligned_cols=172  Identities=17%  Similarity=0.286  Sum_probs=135.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      ..++....||+|+||.||++....   .+..|++|.+.       ..+.+|+.++..+.|+|++++++++...+..++++
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcC---CCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence            445556689999999999998764   67899999873       45788999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhC----------------------------Cccc--------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA----------------------------DNLT--------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------------  123 (228)
                      ||+ ++++|.+++...                            +|++                                
T Consensus        98 e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  176 (297)
T cd06659          98 EFL-QGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS  176 (297)
T ss_pred             ecC-CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence            999 999998876543                            2222                                


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++||||||++++||++  |..||...+..+....+....     ......+...+.++.+
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~  249 (297)
T cd06659         177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD--GEPPYFSDSPVQAMKRLRDSP-----PPKLKNAHKISPVLRD  249 (297)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhccC-----CCCccccCCCCHHHHH
Confidence                        223356788999999999999999  668887766555544443211     1112234467889999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+||+.+|.+||++.+++++
T Consensus       250 ~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         250 FLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHhcCCcccCcCHHHHhhC
Confidence            9999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.92  E-value=2.4e-24  Score=177.60  Aligned_cols=160  Identities=19%  Similarity=0.297  Sum_probs=126.8

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHH-HHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREI-RFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~-~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   .+..||+|.+..          .+.+|. .+++.++|+||+++++++...+..+++|||
T Consensus         1 ~~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05602           1 KVIGKGSFGKVLLARHKA---EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDY   77 (325)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeC
Confidence            368999999999998865   678899998842          233343 346778999999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             |||+                                 
T Consensus        78 ~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~  156 (325)
T cd05602          78 I-NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTF  156 (325)
T ss_pred             C-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccc
Confidence            9 999999887653                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 ..+..++.++|||||||++|||++  |..||.+.+..+....+...        ....+..++.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (325)
T cd05602         157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY--GLPPFYSRNTAEMYDNILNK--------PLQLKPNITNSARHL  226 (325)
T ss_pred             cCCccccCHHHHcCCCCCCccccccccHHHHHHhc--CCCCCCCCCHHHHHHHHHhC--------CcCCCCCCCHHHHHH
Confidence                       233457789999999999999999  67999887777666655432        233455788999999


Q ss_pred             HHHhhccCCCCCCCHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQI  210 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v  210 (228)
                      +.+||+.+|.+|+++.+.
T Consensus       227 i~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         227 LEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             HHHHcccCHHHCCCCCCC
Confidence            999999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=8.7e-24  Score=174.73  Aligned_cols=174  Identities=18%  Similarity=0.238  Sum_probs=133.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.++..++|+||+++++++..++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKN---TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLY   77 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEE
Confidence            368899999999999999998875   67899999984          23677889999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      +||||+ ++|+|.+++...                              +||+                           
T Consensus        78 lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          78 LVMDYY-VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             EEEecC-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence            999999 999999998642                              3333                           


Q ss_pred             ------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 ------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                        .     ....++.++|||||||++|||++  |..||.+.+..+....+.......  . ..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~--g~~Pf~~~~~~~~~~~i~~~~~~~--~-~~~  231 (331)
T cd05597         157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY--GETPFYAESLVETYGKIMNHKEHF--Q-FPP  231 (331)
T ss_pred             CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh--CCCCCCCCCHHHHHHHHHcCCCcc--c-CCC
Confidence                              0     01235678999999999999999  679998877666655554321100  0 112


Q ss_pred             CCCCCcHHHHHHHHHhhccCCC--CCCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQT--MRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~--~Rps~~~v~~~  213 (228)
                      ....+++++++++.+|+..++.  .|+++.+++.+
T Consensus       232 ~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         232 DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            2334789999999998765444  37899999876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.92  E-value=2.9e-24  Score=171.13  Aligned_cols=167  Identities=23%  Similarity=0.360  Sum_probs=132.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|++.+.||+|+||.||++....   .+..|++|.+.          ..+.+|++++++++|+||+++++++...+..++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   77 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRD---TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYL   77 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEcc---CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEE
Confidence            47888999999999999998765   67889999883          356789999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      ++||+ .+++|.+++...                             ++|+                             
T Consensus        78 v~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  156 (258)
T cd05578          78 VVDLL-LGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT  156 (258)
T ss_pred             EEeCC-CCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc
Confidence            99999 999999988644                             1111                             


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                    .....++.++|+||||+++|+|++  |..||...+..   ........        .....|..++
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  226 (258)
T cd05578         157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLR--GKRPYRGHSRTIRDQIRAKQET--------ADVLYPATWS  226 (258)
T ss_pred             cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHh--CCCCCCCCCccHHHHHHHHhcc--------ccccCcccCc
Confidence                          223346889999999999999999  66888876642   22221111        1334566788


Q ss_pred             HHHHHHHHHhhccCCCCCCCH--HHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTF--KQIYS  212 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~--~~v~~  212 (228)
                      .++.+++.+||+.+|.+||++  .+++.
T Consensus       227 ~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         227 TEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            999999999999999999999  66543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=9.1e-24  Score=168.29  Aligned_cols=169  Identities=21%  Similarity=0.371  Sum_probs=132.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~  100 (228)
                      +|++.+.||+|+||.||++....   .+..|++|.+.         ..+.+|+++++.++|+|++++++++...  ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS---DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence            36788999999999999998765   67889999873         3467899999999999999999987643  4568


Q ss_pred             EEEeeccccCCHHHHhhhC--------------------------------------Cccc-------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA--------------------------------------DNLT-------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~--------------------------------------r~l~-------------------  123 (228)
                      ++|||+ ++++|.+++...                                      +|++                   
T Consensus        78 ~~~e~~-~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~  156 (265)
T cd08217          78 IVMEYC-EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGL  156 (265)
T ss_pred             EEehhc-cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccc
Confidence            999999 999998877431                                      1111                   


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....++.++|+||||+++++|++  |..||...+.......+....       .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~  227 (265)
T cd08217         157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCA--LSPPFTARNQLQLASKIKEGK-------F  227 (265)
T ss_pred             cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHH--CCCcccCcCHHHHHHHHhcCC-------C
Confidence                                     112235678999999999999999  668998777655555444321       2


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+...+.++.+++.+||+.+|.+||++.+|+++
T Consensus       228 ~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         228 RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            23456788999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=2.4e-24  Score=177.25  Aligned_cols=158  Identities=23%  Similarity=0.351  Sum_probs=125.5

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHH-HHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIR-FLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~-~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++||+|+||.||++....   .+..||+|.+.          ..+.+|.. +++.++|+||+++++++...+..+++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   77 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKS---DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDY   77 (321)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcC
Confidence            368999999999999865   67899999884          12344543 56788999999999999988899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (321)
T cd05603          78 V-NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTF  156 (321)
T ss_pred             C-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccc
Confidence            9 999998877543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++|||||||++|||++  |..||...+.......+...        ....|...+.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~l  226 (321)
T cd05603         157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY--GLPPFYSRDVSQMYDNILHK--------PLQLPGGKTVAACDL  226 (321)
T ss_pred             cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhc--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHH
Confidence                       223457789999999999999999  67999887776665555432        234456778899999


Q ss_pred             HHHhhccCCCCCCCHH
Q psy796          193 MCDCWKRDQTMRPTFK  208 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~  208 (228)
                      +.+||+.+|.+||++.
T Consensus       227 i~~~l~~~p~~R~~~~  242 (321)
T cd05603         227 LVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHccCCHhhcCCCC
Confidence            9999999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.92  E-value=1.5e-23  Score=167.23  Aligned_cols=169  Identities=21%  Similarity=0.310  Sum_probs=134.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|++.+.||+|++|.||++....   .+..|++|.+.        ..+.+|+..+..++|+|++++++++...+..++++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~---~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKP---TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL   78 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcC---CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence            57888999999999999998875   68899999873        45788999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ ++++|.+++...                              ++++                              
T Consensus        79 e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          79 EYM-DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             Eec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence            999 999999988653                              1111                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC---hHHHHHHHHHhhhCCCccccCCCCCC-C
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT---NEQVIQNAEHMYYGGELQVFLPKPSL-C  185 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~  185 (228)
                                    .....++.++|+||||+++|||++  +..||...+   ..+....+....       ....+.. +
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  228 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECAL--GKFPFLPPGQPSFFELMQAICDGP-------PPSLPAEEF  228 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHh--CCCCCccccccCHHHHHHHHhcCC-------CCCCCcccC
Confidence                          112245678999999999999999  668887764   233333332211       2223444 7


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..+.+++.+||..+|.+||++.+++++
T Consensus       229 ~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         229 SPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            8999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=7.2e-24  Score=191.89  Aligned_cols=174  Identities=17%  Similarity=0.286  Sum_probs=133.0

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +.+....+|.+.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++..++|+||+++++++..
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~---tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d   83 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKR---TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN   83 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECC---CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence            344455679999999999999999999875   67889999873         447889999999999999999998865


Q ss_pred             C--CCCeEEEeeccccCCHHHHhhhC----------------------------------------Cccc----------
Q psy796           96 E--QPPWLVMEYPAQLGDLVQHLNSA----------------------------------------DNLT----------  123 (228)
Q Consensus        96 ~--~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------r~l~----------  123 (228)
                      .  ..++|||||+ ++|+|.++|...                                        +||+          
T Consensus        84 e~~~~lyIVMEY~-~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~  162 (1021)
T PTZ00266         84 KANQKLYILMEFC-DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI  162 (1021)
T ss_pred             cCCCEEEEEEeCC-CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence            4  4579999999 999998766431                                        1222          


Q ss_pred             --------------------------------------------------c--ccCCCCCccchHHHHHHHHHHHhcCCC
Q psy796          124 --------------------------------------------------R--DRDRYTCQSNVWSFAVTLWEILSLCRD  151 (228)
Q Consensus       124 --------------------------------------------------~--~~~~~~~~~Dv~s~Gv~l~el~~~~~~  151 (228)
                                                                        +  ....++.++|||||||++|||++  +.
T Consensus       163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT--Gk  240 (1021)
T PTZ00266        163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS--GK  240 (1021)
T ss_pred             cccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH--CC
Confidence                                                              0  11236788999999999999999  67


Q ss_pred             CCCCCCChHH-HHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          152 KPFPHLTNEQ-VIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       152 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .||...+... +...+...        ........+.++.+||..||+.+|.+||++.+++.
T Consensus       241 ~PF~~~~~~~qli~~lk~~--------p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        241 TPFHKANNFSQLISELKRG--------PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CCCCcCCcHHHHHHHHhcC--------CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            8987655432 33222211        11122356889999999999999999999999985

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=2.6e-24  Score=174.83  Aligned_cols=173  Identities=16%  Similarity=0.281  Sum_probs=135.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++.+.....||+|+||.||++....   .+..||+|.+.       +.+.+|+.++..++|+|++++++.+...+..+++
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv   97 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKH---TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVV   97 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECC---CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEE
Confidence            3445556789999999999998754   67899999873       4577899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||+ ++++|.+++...                            +||+                               
T Consensus        98 ~e~~-~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~  176 (292)
T cd06658          98 MEFL-EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK  176 (292)
T ss_pred             EeCC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence            9999 999998887442                            2222                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++||||||++++||++  |..||...+.......+....     ..........+..+.
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  249 (292)
T cd06658         177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID--GEPPYFNEPPLQAMRRIRDNL-----PPRVKDSHKVSSVLR  249 (292)
T ss_pred             eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcC-----CCccccccccCHHHH
Confidence                         112356789999999999999999  568888766655544433221     112222345678999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||..+|.+|||+.+++++
T Consensus       250 ~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         250 GFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHccCChhHCcCHHHHhhC
Confidence            99999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=8.7e-24  Score=169.36  Aligned_cols=173  Identities=22%  Similarity=0.395  Sum_probs=131.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------------HHHHHHHHHHhh-CCCCCcceeeeee
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------GDSLREIRFLSS-LQDPNLVSILGVC   93 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------~~~~~e~~~l~~-l~h~niv~~~g~~   93 (228)
                      +|++.+.||+|+||.||++.....  .+..+++|.+.                 .++.+|+.++.+ ++|+|++++++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   78 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF   78 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence            367788999999999999998641  35789999763                 235678887765 7999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc----------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT----------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~----------------  123 (228)
                      ...+..+++|||+ ++++|.+++...                                  +|++                
T Consensus        79 ~~~~~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          79 LENDRLYIVMDLI-EGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             ccCCeEEEEEecC-CCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEec
Confidence            9988999999999 999998776321                                  1222                


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++||||||+++|||++  +..||...........+.....     
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----  230 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT--LQPPFYSTNMLSLATKIVEAVY-----  230 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh--CCCcccccCHHHHHHHHhhccC-----
Confidence                                       122346788999999999999999  5688876655554444432211     


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                       .......++.++.+++.+||+.+|++||++.++..+++
T Consensus       231 -~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         231 -EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             -CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence             11122357889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.92  E-value=7.3e-24  Score=169.53  Aligned_cols=173  Identities=15%  Similarity=0.250  Sum_probs=132.2

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +|+..+.||+|+||.||++....   ++..||+|.+.             ..+.+|+.++++++|+||+++++++...+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~---~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   77 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVK---TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSH   77 (268)
T ss_pred             CccccceecCcCceEEEEEEEcC---CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCe
Confidence            35677899999999999998755   67899999883             347889999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .++++||+ ++++|.+++...                             ++|+                          
T Consensus        78 ~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          78 FNLFVEWM-AGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             EEEEEecc-CCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence            99999999 999999988653                             1111                          


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||+|+++++|++  |..||...........+.......   ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~---~~~~  231 (268)
T cd06630         157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT--AKPPWNAEKHSNHLALIFKIASAT---TAPS  231 (268)
T ss_pred             ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh--CCCCCCCCCCcchHHHHHHHhccC---CCCC
Confidence                                   111345678999999999999999  568886544332222222111110   0233


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+...+.++.+++.+||+.+|.+||++.+++.+
T Consensus       232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         232 IPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            455678899999999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.92  E-value=7.8e-24  Score=175.07  Aligned_cols=174  Identities=16%  Similarity=0.222  Sum_probs=135.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .+..+|+|.+.          ..+.+|+.++..++|+||+++++++.+.+..+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLY   77 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEE
Confidence            368899999999999999999865   67889999884          22667888999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++|+|.+++.+.                              |||+                           
T Consensus        78 lv~ey~-~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          78 LVMDYY-VGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             EEEecc-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence            999999 999999999652                              3333                           


Q ss_pred             ------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 ------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                        .     ....++.++|||||||++|||++  |..||...+..+....+......   .....
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~--g~~Pf~~~~~~~~~~~i~~~~~~---~~~p~  231 (332)
T cd05623         157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY--GETPFYAESLVETYGKIMNHKER---FQFPA  231 (332)
T ss_pred             cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc--CCCCCCCCCHHHHHHHHhCCCcc---ccCCC
Confidence                              1     12346789999999999999999  67999888777666655432110   00112


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                      .+..++.++++++.+|+..++.+  |+++.++++|
T Consensus       232 ~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         232 QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            23467899999999988665544  6899999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=6e-24  Score=171.51  Aligned_cols=173  Identities=17%  Similarity=0.316  Sum_probs=130.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeC------
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTG------   95 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~------   95 (228)
                      +...+++.+.||+|+||.||+|....   .+..+|+|.+.      ..+..|+.++.++ +|+|++++++++..      
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcC---CCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            45678888999999999999999865   67899999873      4567888888888 79999999999853      


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                      .+..+++|||+ ++|+|.+++...                               ++++                     
T Consensus        91 ~~~~~iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636          91 DDQLWLVMEFC-GAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCEEEEEEEeC-CCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            24568999999 999999888542                               1111                     


Q ss_pred             -----------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 -----------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 -----------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                             .     ....++.++||||||+++|||++  +..||...........+...      
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~--g~~p~~~~~~~~~~~~~~~~------  241 (282)
T cd06636         170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE--GAPPLCDMHPMRALFLIPRN------  241 (282)
T ss_pred             hhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh--CCCCccccCHHhhhhhHhhC------
Confidence                                   0     02346678999999999999999  56888766544333222211      


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ......+..++.++.+++.+||+.+|.+||++.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         242 PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            00112234578999999999999999999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=1.5e-23  Score=172.29  Aligned_cols=176  Identities=21%  Similarity=0.379  Sum_probs=135.8

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++..|...+.||+|+||.||++....   .+..|++|.+.          ..+.+|+++++.++|+|++++++++...+.
T Consensus        23 ~~~~f~~~~~lg~G~~~~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (317)
T cd06635          23 PEKLFTDLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT   99 (317)
T ss_pred             chhhhhhhheeccCCCeEEEEEEEcC---CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence            33456778899999999999998865   67899999873          347789999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ + |++.+++...                              ++|+                         
T Consensus       100 ~~lv~e~~-~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         100 AWLVMEYC-L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             EEEEEeCC-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            99999999 7 6777766432                              1211                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++|||++  |..||...........+.....      ....+..+
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~  249 (317)
T cd06635         178 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQNES------PTLQSNEW  249 (317)
T ss_pred             cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh--CCCCCCCccHHHHHHHHHhccC------CCCCCccc
Confidence                              023457889999999999999999  5688877665554444432210      11223457


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +..+.+++.+||+.+|.+||++.++++++-.+
T Consensus       250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             cHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence            78999999999999999999999999876554

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=6.8e-24  Score=170.70  Aligned_cols=168  Identities=17%  Similarity=0.358  Sum_probs=130.3

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCC---CCCcceeeeeeeCCCCCeE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQ---DPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~---h~niv~~~g~~~~~~~~~l  101 (228)
                      |+..+.||+|+||.||+|....   .+..|++|.++        ..+.+|+.+++++.   |+|++++++++......++
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVP---TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcC---CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            5667889999999999999865   67899999873        45778999999886   9999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC----------------------------Cccc------------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA----------------------------DNLT------------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~----------------------------r~l~------------------------------  123 (228)
                      +|||+ ++++|.+++...                            ++++                              
T Consensus        80 v~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          80 IMEYA-EGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EEecC-CCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            99999 999999887654                            1111                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC-CCCCcH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK-PSLCPR  187 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  187 (228)
                                     ..+..++.++||||||+++|+|++  |..||...........+...    .   .... ....+.
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~--g~~p~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~  229 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT--GNPPYSDVDAFRAMMLIPKS----K---PPRLEDNGYSK  229 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHh--CCCCCCCCChhhhhhccccC----C---CCCCCcccCCH
Confidence                           112235789999999999999999  66898776554333222111    0   1111 223778


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|++||++.+++.+
T Consensus       230 ~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         230 LLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            99999999999999999999999873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.92  E-value=6.1e-24  Score=169.73  Aligned_cols=172  Identities=23%  Similarity=0.363  Sum_probs=131.4

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|+..+.||+|+||.||++....   .+..|++|.+.        ..+.+|+++++.++|+||+++++.+...+..++++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRP---TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM   78 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcC---CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence            57778899999999999998875   67899999873        45788999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC-------------------------------Cccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------------  123 (228)
                      ||+ ++++|.+++...                               ++|+                             
T Consensus        79 e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  157 (265)
T cd06605          79 EYM-DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK  157 (265)
T ss_pred             Eec-CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence            999 989999888642                               1121                             


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC--hHHHHHHHHHhhhCCCccccCCCCCC-CcH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--NEQVIQNAEHMYYGGELQVFLPKPSL-CPR  187 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  187 (228)
                                   ..+..++.++||||||+++++|++  |..||...+  .......+.......    ....+.. ++.
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  231 (265)
T cd06605         158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT--GRFPYPPENDPPDGIFELLQYIVNEP----PPRLPSGKFSP  231 (265)
T ss_pred             cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHh--CCCCCCccccccccHHHHHHHHhcCC----CCCCChhhcCH
Confidence                         223457788999999999999999  567876542  111222222211111    1122222 788


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||..+|.+|||+.+++.+
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         232 DFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            99999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=6.9e-24  Score=171.25  Aligned_cols=176  Identities=19%  Similarity=0.271  Sum_probs=128.4

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||++....   .+..|++|.++         ..+.+|++++++++|+|++++++++.+.+..+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~---~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC---CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEE
Confidence            36788999999999999999876   67899999884         3467899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      +||+ . ++|.+++...                              ++++                             
T Consensus        78 ~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  155 (284)
T cd07839          78 FEYC-D-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC  155 (284)
T ss_pred             EecC-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence            9998 7 6888877532                              2222                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------------Cc
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------------EL  175 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------~~  175 (228)
                                      .....++.++||||||+++|||++|+ .++|.+.+.......+.......            ..
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07839         156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG-RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY  234 (284)
T ss_pred             cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC-CCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence                            11123578899999999999999963 34455544443333322211000            00


Q ss_pred             cc--cC-------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QV--FL-------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~--~~-------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..  ..       .....++.++.+++.+||+.+|.+|||+.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            00  00       0113467899999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0600|consensus

Probab=99.91  E-value=2.6e-24  Score=177.89  Aligned_cols=176  Identities=21%  Similarity=0.324  Sum_probs=137.9

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QP   98 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~   98 (228)
                      .+.|+.++.||+|.||.||+++...   ++..||+|.++         ....|||.+|++++||||+++.+.....  ..
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~---tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s  192 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLE---TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS  192 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecc---cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence            3567778999999999999999876   88999999995         3368999999999999999999998776  58


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      +|||+||+ + -+|.-++...                              |||+                         
T Consensus       193 iYlVFeYM-d-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  193 IYLVFEYM-D-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             EEEEEecc-c-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            89999999 6 5776655443                              5555                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC--CCccc--c
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG--GELQV--F  178 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~--~  178 (228)
                                           +....|+.++|+||.|||+.||++  |.+.|.+.+-.+....|-.....  +...+  .
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~--gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k  348 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFL--GKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK  348 (560)
T ss_pred             CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHc--CCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence                                 556689999999999999999999  66888888776665555443211  11111  1


Q ss_pred             CCC-----C------------CCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          179 LPK-----P------------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       179 ~~~-----~------------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++.     |            ..++....+|+..+|..||.+|.|+.+.++
T Consensus       349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            221     1            125678889999999999999999999886

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.91  E-value=1.8e-23  Score=174.35  Aligned_cols=177  Identities=18%  Similarity=0.216  Sum_probs=128.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|++.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.+++.++|+||+++++++....   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecC---CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence            4578899999999999999998764   67889999884         34678999999999999999999886542   


Q ss_pred             ---CCeEEEeeccccCCHHHHhhhC---------------------------Cccc------------------------
Q psy796           98 ---PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------------  123 (228)
Q Consensus        98 ---~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------------  123 (228)
                         ..+++|||+ . +++.+++...                           +||+                        
T Consensus        93 ~~~~~~lv~e~~-~-~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          93 EFQDVYLVMELM-D-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             ccceeEEEhhhh-c-ccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence               468999999 7 5665544322                           3443                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC------------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG------------  172 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~------------  172 (228)
                                         ..+..++.++|||||||++|||++  +..||.+.+..+....+......            
T Consensus       171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (355)
T cd07874         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_pred             CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence                               233457889999999999999999  66899877654433222111000            


Q ss_pred             ------CCc-------cc-----cC----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 ------GEL-------QV-----FL----PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 ------~~~-------~~-----~~----~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ...       ..     ..    ..+...+.++++++.+|++.||++|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                  000       00     00    0112235678999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.91  E-value=1.4e-23  Score=169.46  Aligned_cols=175  Identities=21%  Similarity=0.315  Sum_probs=128.2

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|+..+.||+|+||.||+|....   ++..|++|.++         ..+.+|++++++++|+||+++++++......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   77 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECC---CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEE
Confidence            47788999999999999998865   67899999884         3578899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||+ . ++|.+++...                               ++++                            
T Consensus        78 ~e~~-~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          78 FEFL-H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             eecc-c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            9998 6 5787776432                               1111                            


Q ss_pred             ----------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 ----------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 ----------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                      .. ...++.++||||||++++||++  |..||.+.+..+....+.........           
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD  233 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence                            01 1224678999999999999999  56788765544332222111100000           


Q ss_pred             -cccC---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -QVFL---------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~~~~---------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....         .....++.++++++.+||+.+|.+|||+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence             0000         0123467889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.91  E-value=3.3e-23  Score=165.29  Aligned_cols=170  Identities=22%  Similarity=0.375  Sum_probs=130.7

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |.+.+.||+|+||.||+|....   .+..|++|.++         ..+.+|+++++.++|+||+++++.+...+..++++
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLD---TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM   78 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECC---CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence            6778999999999999998765   67899999874         34678999999999999999999998888899999


Q ss_pred             eeccccCCHHHHhhhC-----------------------------Cccc-------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------------  123 (228)
                      ||+ ++++|.+++...                             ++|+                               
T Consensus        79 e~~-~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          79 EYC-SGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             ecC-CCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence            999 999999988654                             1121                               


Q ss_pred             -----------------cccC---CCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCC
Q psy796          124 -----------------RDRD---RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 -----------------~~~~---~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                       ....   .++.++||||||++++||++  |..||...... .....+..     ...+..+..
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~--g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~  230 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT--GKRPWSELDNEFQIMFHVGA-----GHKPPIPDS  230 (264)
T ss_pred             ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh--CCCCccCCcchHHHHHHHhc-----CCCCCCCcc
Confidence                             0001   16778999999999999999  66898765432 22222211     111122223


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++..+.+++.+||+.+|.+||++.+++.+
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         231 LQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            3458899999999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.91  E-value=4.1e-24  Score=176.20  Aligned_cols=158  Identities=18%  Similarity=0.306  Sum_probs=125.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHH-HHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIR-FLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~-~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   ++..||+|++..          .+.+|.. +++.++|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKL---DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDF   77 (325)
T ss_pred             CceeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcC
Confidence            368999999999998765   788999998842          2344544 46678999999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (325)
T cd05604          78 V-NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF  156 (325)
T ss_pred             C-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccc
Confidence            9 999998887654                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++|||||||++|||++  |..||...+..+....+...        ....+...+.++.++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--G~~pf~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l  226 (325)
T cd05604         157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY--GLPPFYCRDVAEMYDNILHK--------PLVLRPGASLTAWSI  226 (325)
T ss_pred             cCChhhCCHHHHcCCCCCCcCccccccceehhhhc--CCCCCCCCCHHHHHHHHHcC--------CccCCCCCCHHHHHH
Confidence                       233457889999999999999999  67999887777666555432        233345688999999


Q ss_pred             HHHhhccCCCCCCCHH
Q psy796          193 MCDCWKRDQTMRPTFK  208 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~  208 (228)
                      +.+|++.+|.+||++.
T Consensus       227 l~~ll~~~p~~R~~~~  242 (325)
T cd05604         227 LEELLEKDRQRRLGAK  242 (325)
T ss_pred             HHHHhccCHHhcCCCC
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0585|consensus

Probab=99.91  E-value=5.5e-24  Score=174.96  Aligned_cols=170  Identities=22%  Similarity=0.312  Sum_probs=138.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------------HHHHHHHHHHhhCCCCCccee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------------GDSLREIRFLSSLQDPNLVSI   89 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------------~~~~~e~~~l~~l~h~niv~~   89 (228)
                      ..|+++..||+|.||+|-+|....   .+..||||++.                     +...+||.+|++++|+|||++
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~---~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEV---DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecC---CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            467888999999999999998876   78999999992                     467899999999999999999


Q ss_pred             eeeeeCC--CCCeEEEeeccccCCHHH-------------------------HhhhC----Cccc---------------
Q psy796           90 LGVCTGE--QPPWLVMEYPAQLGDLVQ-------------------------HLNSA----DNLT---------------  123 (228)
Q Consensus        90 ~g~~~~~--~~~~lv~e~~~~~g~L~~-------------------------~l~~~----r~l~---------------  123 (228)
                      +.+--+.  +.+|||+||| ..|.+..                         |||..    |||+               
T Consensus       174 iEvLDDP~s~~~YlVley~-s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYC-SKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             EEeecCcccCceEEEEEec-cCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence            9887654  4789999999 7777632                         44432    5665               


Q ss_pred             -----------------------------------cc---cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q psy796          124 -----------------------------------RD---RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN  165 (228)
Q Consensus       124 -----------------------------------~~---~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~  165 (228)
                                                         ..   ....+.+.||||+||+||.|+.  |..||.+....++...
T Consensus       253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf--G~~PF~~~~~~~l~~K  330 (576)
T KOG0585|consen  253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF--GQLPFFDDFELELFDK  330 (576)
T ss_pred             ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh--ccCCcccchHHHHHHH
Confidence                                               11   1123588999999999999999  6799999888888888


Q ss_pred             HHHhhhCCCccccCCCCCC--CcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          166 AEHMYYGGELQVFLPKPSL--CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      |...        .+.+|..  +.+++++||.++|+.||+.|.++.+|..|.
T Consensus       331 Ivn~--------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  331 IVND--------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             HhcC--------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            8653        3444443  689999999999999999999999988764

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.91  E-value=1e-23  Score=170.70  Aligned_cols=176  Identities=20%  Similarity=0.357  Sum_probs=127.6

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPP   99 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~   99 (228)
                      +.++++..+.||+|+||.||++....   .+..||+|.+.        ..+.+|+.++.++. |+||+++++++..+...
T Consensus         2 ~~~~~~~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~   78 (288)
T cd06616           2 TAEDLKDLGEIGRGAFGTVNKMLHKP---SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDC   78 (288)
T ss_pred             cHHHhHHHHHhCCCCceEEEEEEECC---CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcE
Confidence            44567778899999999999998875   67899999884        34678999999986 99999999999888888


Q ss_pred             eEEEeeccccCCHHHH------------------------------hhhC-----Cccc---------------------
Q psy796          100 WLVMEYPAQLGDLVQH------------------------------LNSA-----DNLT---------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~------------------------------l~~~-----r~l~---------------------  123 (228)
                      +++|||+ . +++.++                              ||..     +||+                     
T Consensus        79 ~~~~e~~-~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616          79 WICMELM-D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             EEEEecc-c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence            9999997 5 444332                              2110     2333                     


Q ss_pred             ----------------------ccc---CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 ----------------------RDR---DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 ----------------------~~~---~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                            ...   ..++.++||||||+++|||++  |..||.....  ....+............
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~--~~~~~~~~~~~~~~~~~  232 (288)
T cd06616         157 QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVAT--GKFPYPKWNS--VFDQLTQVVKGDPPILS  232 (288)
T ss_pred             HhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHh--CCCCchhcch--HHHHHhhhcCCCCCcCC
Confidence                                  111   257789999999999999999  6688876542  22222222111111101


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+..++.++.+++.+||+.+|++|||+.+|+.+
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11223578899999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.91  E-value=1.3e-23  Score=173.50  Aligned_cols=157  Identities=17%  Similarity=0.314  Sum_probs=122.2

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||++....   ++..||+|.++.          .+.+|+.++.++ +|+||+++++++...+..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   77 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKK---NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY   77 (327)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence            468999999999998875   778999999952          256788888887 699999999999988899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|..++...                             +||+                                 
T Consensus        78 ~-~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (327)
T cd05617          78 V-NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTF  156 (327)
T ss_pred             C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecc
Confidence            9 999998877543                             3333                                 


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC------hHH-HHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT------NEQ-VIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                 ..+..++.++||||||+++|||++  |..||....      ..+ ....+..    .    ....|..+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~----~----~~~~p~~~  226 (327)
T cd05617         157 CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA--GRSPFDIITDNPDMNTEDYLFQVILE----K----PIRIPRFL  226 (327)
T ss_pred             cCCcccCCHHHHCCCCCCchheeehhHHHHHHHHh--CCCCCCccCCCcccccHHHHHHHHHh----C----CCCCCCCC
Confidence                       234567789999999999999999  568885422      111 2222211    1    23356678


Q ss_pred             cHHHHHHHHHhhccCCCCCCCH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~  207 (228)
                      +.++.+++.+||+.||.+|+++
T Consensus       227 ~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         227 SVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CHHHHHHHHHHhccCHHHcCCC
Confidence            8999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.91  E-value=1.9e-23  Score=166.25  Aligned_cols=167  Identities=23%  Similarity=0.359  Sum_probs=124.7

Q ss_pred             eeecccceeeEEEEEEeccC-------CCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           37 ERLGSCHLGEMMICETEDIE-------LDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~-------~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.||+|+||.||+|......       .....|++|.+.      ..+.+|+.+++.++|+|+++++|++.. ...+++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            46899999999999987521       012467888763      457789999999999999999999987 6789999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ ++|+|.+++...                              +||+                              
T Consensus        80 e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          80 EYV-KFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EcC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            999 999999988653                              1121                              


Q ss_pred             -----------------ccc--CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -----------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -----------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                       ...  ..++.++||||||+++|||+++ +..||...+..........         ....+..
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~-~~~p~~~~~~~~~~~~~~~---------~~~~~~~  228 (259)
T cd05037         159 LSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN-GEEPLSTLSSSEKERFYQD---------QHRLPMP  228 (259)
T ss_pred             ccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC-CCCCcccCCchhHHHHHhc---------CCCCCCC
Confidence                             111  2567789999999999999996 4678877654333322221         1111222


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      ....+.+++.+||..+|.+|||+.+|++.|+
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         229 DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            2378999999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.91  E-value=8.2e-24  Score=176.78  Aligned_cols=172  Identities=19%  Similarity=0.261  Sum_probs=134.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.++          ..+.+|+.++..++|+||+++++.+.+.+..+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~   77 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKD---TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLY   77 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            368889999999999999998875   68899999884          23567999999999999999999999998999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++|+|.+++...                             |||+                            
T Consensus        78 lv~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~  156 (360)
T cd05627          78 LIMEFL-PGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR  156 (360)
T ss_pred             EEEeCC-CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence            999999 999999988654                             3333                            


Q ss_pred             ---------------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          124 ---------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       124 ---------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                                                                         ..+..++.++|||||||++|||++  |..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t--G~~  234 (360)
T cd05627         157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI--GYP  234 (360)
T ss_pred             cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc--CCC
Confidence                                                               012346778999999999999999  679


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC---HHHHHHH
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT---FKQIYSF  213 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps---~~~v~~~  213 (228)
                      ||.+.+.......+.....    ....+....++.++++++.+++. +|.+|++   +.++++|
T Consensus       235 Pf~~~~~~~~~~~i~~~~~----~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         235 PFCSETPQETYRKVMNWKE----TLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCCCCCHHHHHHHHHcCCC----ceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            9988887766665543211    11122233478899999998764 9999985   6777654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.91  E-value=3.2e-23  Score=173.43  Aligned_cols=177  Identities=16%  Similarity=0.207  Sum_probs=128.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|.+.+.||+|+||.||++....   .++.||||.+.         ..+.+|+.+++.++|+||+++++++....   
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECC---CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence            4568899999999999999998765   67889999884         34678999999999999999999876432   


Q ss_pred             ---CCeEEEeeccccCCHHHHhhhC---------------------------Cccc------------------------
Q psy796           98 ---PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------------  123 (228)
Q Consensus        98 ---~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------------  123 (228)
                         ..+++|||+ + ++|.+++...                           +||+                        
T Consensus       100 ~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         100 EFQDVYIVMELM-D-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             ccCeEEEEEeCC-C-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence               469999998 6 5666554322                           3333                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC------------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG------------  172 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~------------  172 (228)
                                         ..+..++.++|||||||++|||++  |..||.+.+..+....+......            
T Consensus       178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (364)
T cd07875         178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK--GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  255 (364)
T ss_pred             CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence                               233457889999999999999999  56899877765544433221100            


Q ss_pred             ------CCcc----------cc--C----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 ------GELQ----------VF--L----PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 ------~~~~----------~~--~----~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            .+..          ..  .    ......+.++.+++.+|++.||.+|||+.++++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                  0000          00  0    0011134678999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-23  Score=168.32  Aligned_cols=176  Identities=20%  Similarity=0.307  Sum_probs=130.2

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||+|....   ++..|++|.++         ..+.+|++++++++|+||+++++++...+..+++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv   78 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKA---TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV   78 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCC---CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence            57889999999999999998865   67899999874         4578899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||+ +++.+..+....                             ++++                              
T Consensus        79 ~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          79 FEYV-ERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             EecC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence            9999 876666544332                             1111                              


Q ss_pred             ---------------cccC-CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC------------c
Q psy796          124 ---------------RDRD-RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE------------L  175 (228)
Q Consensus       124 ---------------~~~~-~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------~  175 (228)
                                     .... .++.++||||||+++|+|++  |..||.+.+..+....+........            .
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLD--GEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF  235 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence                           1122 56788999999999999999  5688876655443332222110000            0


Q ss_pred             -cccC-----------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -QVFL-----------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~~~~-----------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....           ..+..++.++.+++.+||..+|++||++++++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence             0000           1123458899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.91  E-value=2.4e-23  Score=166.20  Aligned_cols=162  Identities=19%  Similarity=0.296  Sum_probs=128.3

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||.|+||.||++....   .+..+++|.+.          ..+.+|+.+++.++|+||+++++.+.+.+..++++||+ +
T Consensus         1 lg~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKS---KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC-L   76 (262)
T ss_pred             CCCCCceEEEEEEECC---CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC-C
Confidence            6999999999999865   67899999873          34778999999999999999999999888999999999 9


Q ss_pred             cCCHHHHhhhCCc-----------------------------cc------------------------------------
Q psy796          109 LGDLVQHLNSADN-----------------------------LT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~r~-----------------------------l~------------------------------------  123 (228)
                      +++|.+++.+...                             ++                                    
T Consensus        77 ~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~  156 (262)
T cd05572          77 GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTP  156 (262)
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCc
Confidence            9999999875411                             11                                    


Q ss_pred             -------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC--hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 -------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 -------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                             .....++.++|+||||+++|+|++  |..||....  .......+.....      ....|..++.++.+++.
T Consensus       157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~  228 (262)
T cd05572         157 EYVAPEIILNKGYDFSVDYWSLGILLYELLT--GRPPFGEDDEDPMEIYNDILKGNG------KLEFPNYIDKAAKDLIK  228 (262)
T ss_pred             CccChhHhcCCCCCChhhhhhhHHHHHHHHh--CCCCcCCCCCCHHHHHHHHhccCC------CCCCCcccCHHHHHHHH
Confidence                   122346788999999999999999  668887665  4444443332111      33445566899999999


Q ss_pred             HhhccCCCCCCC-----HHHHHH
Q psy796          195 DCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       195 ~c~~~~p~~Rps-----~~~v~~  212 (228)
                      +||+.+|++||+     +.++++
T Consensus       229 ~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         229 QLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHccCChhhCcCCcccCHHHHhc
Confidence            999999999999     777765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.91  E-value=5.8e-24  Score=169.19  Aligned_cols=174  Identities=25%  Similarity=0.462  Sum_probs=132.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |++++.||+|+||.||++....   ++..+|+|.+.         ....+|+.++..++|+||+++++++...+..+++|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK---NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT---TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECC---CCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccc
Confidence            5688999999999999999876   77899999994         22345899999999999999999999988899999


Q ss_pred             eeccccCCHHHHhhhC-----------------------------Cccc-------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------------  123 (228)
                      ||+ .+++|.+++...                             +||+                               
T Consensus        78 ~~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~  156 (260)
T PF00069_consen   78 EYC-PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFN  156 (260)
T ss_dssp             EEE-TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBS
T ss_pred             ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999 888999998732                             2222                               


Q ss_pred             -------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                   .. ....+.++||||+|+++++|++  +..||...+..+....+........ ..........+.++
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  233 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLT--GKLPFEESNSDDQLEIIEKILKRPL-PSSSQQSREKSEEL  233 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHH--SSSSSTTSSHHHHHHHHHHHHHTHH-HHHTTSHTTSHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccc--cccccccccchhhhhhhhhcccccc-cccccccchhHHHH
Confidence                         33 5678899999999999999999  5688887743333332222211100 00111112234899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.+|++||++.+++++
T Consensus       234 ~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  234 RDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=2.5e-23  Score=187.53  Aligned_cols=176  Identities=15%  Similarity=0.264  Sum_probs=135.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .+|++.+.||+|+||.||+|....   .++.||+|.++          .++.+|++++.+++||||+++++++.+.+..+
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~---tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ly   78 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPV---CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVY   78 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECC---CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEE
Confidence            468899999999999999998765   68899999873          45788999999999999999999999888899


Q ss_pred             EEEeeccccCCHHHHhhhC----------------------------------------Cccc-----------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA----------------------------------------DNLT-----------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~----------------------------------------r~l~-----------------  123 (228)
                      ++|||+ ++|+|.+++...                                        |||+                 
T Consensus        79 LVMEY~-eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDF  157 (932)
T PRK13184         79 YTMPYI-EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDW  157 (932)
T ss_pred             EEEEcC-CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEec
Confidence            999999 999998877521                                        3333                 


Q ss_pred             ---------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC
Q psy796          124 ---------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT  158 (228)
Q Consensus       124 ---------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~  158 (228)
                                                                   ..+..++.++|||||||+++||++  |..||....
T Consensus       158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLT--G~~PF~~~~  235 (932)
T PRK13184        158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT--LSFPYRRKK  235 (932)
T ss_pred             CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHH--CCCCCCCcc
Confidence                                                         112245778999999999999999  568997755


Q ss_pred             hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHH
Q psy796          159 NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRP-TFKQIYSFMKRS  217 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rp-s~~~v~~~l~~~  217 (228)
                      ......... ..    .+........++..+.+++.+||+.+|++|+ +++++.+.|+..
T Consensus       236 ~~ki~~~~~-i~----~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        236 GRKISYRDV-IL----SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             hhhhhhhhh-cc----ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            443322110 00    0001112245788999999999999999995 577788888877

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.91  E-value=4.9e-23  Score=163.32  Aligned_cols=169  Identities=21%  Similarity=0.424  Sum_probs=136.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|.+.+.||+|+||.||++....   ++..+++|.+.         ..+.+|+++++.++|+|++++++.+...+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS---DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC---CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE
Confidence            46788999999999999999865   67899999884         3477899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC---------------------------------Cccc--------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------------  123 (228)
                      +||+ ++++|.+++...                                 ++++                          
T Consensus        78 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          78 MEYA-DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             EEec-CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            9999 999999988642                                 1111                          


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||+|+++++|++  +..||...+............       ..+.+..+
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~  227 (258)
T cd08215         157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCT--LKHPFEGENLLELALKILKGQ-------YPPIPSQY  227 (258)
T ss_pred             cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHc--CCCCCCCCcHHHHHHHHhcCC-------CCCCCCCC
Confidence                              123446788999999999999999  568888777665555443321       22335578


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||..+|++||++.+++.+
T Consensus       228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         228 SSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            8999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.91  E-value=1.8e-23  Score=165.96  Aligned_cols=169  Identities=22%  Similarity=0.442  Sum_probs=135.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||++....   .+..+++|.+.         ..+.+|++++++++|+||+++++++......+++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLS---DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIV   77 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECC---CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEE
Confidence            46788999999999999998765   67889999874         3467899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC---------------------------------Cccc--------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------------  123 (228)
                      +||+ ++++|.+++.+.                                 ++++                          
T Consensus        78 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          78 MEYA-PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             ehhc-CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            9999 999999988651                                 1111                          


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++|+||||++++||++  +..||...+.......+....       ..+.+..++.
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  227 (256)
T cd08530         157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT--FAPPFEARSMQDLRYKVQRGK-------YPPIPPIYSQ  227 (256)
T ss_pred             CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcCC-------CCCCchhhCH
Confidence                            122345678999999999999999  668998877765554443321       2233456789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|++||++.+++++
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         228 DLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            99999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0033|consensus

Probab=99.91  E-value=2.4e-25  Score=169.52  Aligned_cols=172  Identities=19%  Similarity=0.260  Sum_probs=146.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.|++.++||+|.|+.|+++....   .++.+|+|++.         +++.+|+.+.+.++||||+++..........++
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~---tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhcc---chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            457888999999999999998876   78999999984         668899999999999999999999888888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      |+|++ +|++|..-+...                             ||++                             
T Consensus        88 vFe~m-~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g  166 (355)
T KOG0033|consen   88 VFDLV-TGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG  166 (355)
T ss_pred             EEecc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence            99999 999986544222                             4544                             


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       ....+|+..+|||+-||+++-|+.  |.+||.+.+-..+.+.+..+...    ...+..+.++
T Consensus       167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~--G~~PF~~~~~~rlye~I~~g~yd----~~~~~w~~is  240 (355)
T KOG0033|consen  167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV--GYPPFWDEDQHRLYEQIKAGAYD----YPSPEWDTVT  240 (355)
T ss_pred             cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHh--CCCCCCCccHHHHHHHHhccccC----CCCcccCcCC
Confidence                             556689999999999999999999  66999998888888888776432    2344567899


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++.++|+.+|+..||.+|-|+.+.+.
T Consensus       241 ~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  241 PEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             HHHHHHHHHHhccChhhhccHHHHhC
Confidence            99999999999999999999998775

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.4e-23  Score=169.87  Aligned_cols=170  Identities=20%  Similarity=0.310  Sum_probs=133.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +|+..+.||+|+||.||++....   .+..+|+|.+.          ..+.+|++++..+.|+||+++++.+......++
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKG---TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCL   78 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcC---CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEE
Confidence            57888999999999999998875   67899999884          246789999999999999999999988888999


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ .+++|.+++...                               +||+                           
T Consensus        79 v~e~~-~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          79 VMDYC-PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EEEec-CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            99999 999999988642                               2222                           


Q ss_pred             ----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC
Q psy796          124 ----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL  157 (228)
Q Consensus       124 ----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~  157 (228)
                                                                    ..+..++.++||||||+++|+|++  |..||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~  235 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY--GTTPFKGS  235 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh--CCCCCCCC
Confidence                                                          001224568999999999999999  67899877


Q ss_pred             ChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCC----HHHHHHH
Q psy796          158 TNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT----FKQIYSF  213 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps----~~~v~~~  213 (228)
                      +.......+....      ...+.....+.++.+++.+||+.+|++||+    +.+++.+
T Consensus       236 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         236 NRDETFSNILKKE------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             chHHHHHHHhcCC------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            7665544443211      012222336899999999999999999999    7777764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=2e-23  Score=172.54  Aligned_cols=171  Identities=15%  Similarity=0.199  Sum_probs=133.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|.+.+.||+|+||.||++....   .++.||+|.+.          ..+.+|+.++..++|+||+++++++...+..+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~   77 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKH---TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLY   77 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            468899999999999999998865   67899999884          22567888899999999999999999998999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++|+|.+++...                              +||+                           
T Consensus        78 lv~Ey~-~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          78 LVMDYY-VGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             EEEeCC-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence            999999 999999998652                              2333                           


Q ss_pred             ------------------ccc-----CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 ------------------RDR-----DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ------------------~~~-----~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                        ...     ..++.++||||||+++|||++  |..||...+..+....+.....      +.+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~--g~~Pf~~~~~~~~~~~i~~~~~------~~~  228 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY--GETPFYAESLVETYGKIMNHEE------RFQ  228 (331)
T ss_pred             ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh--CCCCccCCCHHHHHHHHHcCCC------ccc
Confidence                              111     346788999999999999999  6799988777666555543211      122


Q ss_pred             CC---CCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          181 KP---SLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       181 ~~---~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                      .|   ..+++++++++.+|+...+.+  |+++++++.+
T Consensus       229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            22   346899999999999866544  4688888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=4.4e-23  Score=174.30  Aligned_cols=180  Identities=18%  Similarity=0.264  Sum_probs=129.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      ....|++.+.||+|+||.||++..... ..+..|++|.+.  ....+|+++++.++|+||+++++++......+++||++
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~-~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~  168 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGD-EQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY  168 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCC-ccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc
Confidence            345689999999999999999976431 146789999885  45678999999999999999999998888899999998


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       . ++|.+++...                             |||+                                  
T Consensus       169 -~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~  246 (392)
T PHA03207        169 -K-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYG  246 (392)
T ss_pred             -C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccc
Confidence             5 7888877433                             3333                                  


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhC----------------
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYG----------------  172 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~----------------  172 (228)
                                  .....++.++|||||||++|||++  |..||.+....   .....+......                
T Consensus       247 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~--g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  324 (392)
T PHA03207        247 WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV--KNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH  324 (392)
T ss_pred             cccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH--CCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence                        122356788999999999999999  55777654321   111111111000                


Q ss_pred             -----CCccccCCCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 -----GELQVFLPKP-----SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 -----~~~~~~~~~~-----~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                           ...++....+     ...+.++.+++.+||+.+|++|||+.+++.+
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                 0000000111     2346788999999999999999999999975

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.91  E-value=4.5e-23  Score=167.60  Aligned_cols=167  Identities=16%  Similarity=0.273  Sum_probs=132.1

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ...||+|+||.||++....   ++..|++|.+.       ..+.+|+.+++.++|+|++++++.+...+..+++|||+ +
T Consensus        25 ~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~  100 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL-E  100 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcC---CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC-C
Confidence            4679999999999998865   78899999873       45788999999999999999999999888999999999 9


Q ss_pred             cCCHHHHhhhC----------------------------Cccc-------------------------------------
Q psy796          109 LGDLVQHLNSA----------------------------DNLT-------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~----------------------------r~l~-------------------------------------  123 (228)
                      +++|.+++...                            +|++                                     
T Consensus       101 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  180 (292)
T cd06657         101 GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP  180 (292)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence            99998877443                            1222                                     


Q ss_pred             -------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHh
Q psy796          124 -------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDC  196 (228)
Q Consensus       124 -------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  196 (228)
                             .....++.++|+||||+++|||++  |..||.+.........+....     +........++.++.+++.+|
T Consensus       181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~t--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVD--GEPPYFNEPPLKAMKMIRDNL-----PPKLKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhhC-----CcccCCcccCCHHHHHHHHHH
Confidence                   112345788999999999999999  668888766655544443221     112233456788999999999


Q ss_pred             hccCCCCCCCHHHHHHH
Q psy796          197 WKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       197 ~~~~p~~Rps~~~v~~~  213 (228)
                      |+.+|.+||++.+++.+
T Consensus       254 l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         254 LVRDPAQRATAAELLKH  270 (292)
T ss_pred             HhCCcccCcCHHHHhcC
Confidence            99999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.91  E-value=9.5e-23  Score=160.95  Aligned_cols=171  Identities=22%  Similarity=0.437  Sum_probs=133.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      +|+..+.||+|++|.||++....   ++..+++|.+.       ..+.+|++.+..++|+|++++++.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKR---TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECC---CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence            36778899999999999999875   67889999883       457889999999999999999999998888999999


Q ss_pred             eccccCCHHHHhhhC------------------------------Cccc-------------------------------
Q psy796          105 YPAQLGDLVQHLNSA------------------------------DNLT-------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~------------------------------r~l~-------------------------------  123 (228)
                      |+ ++++|.+++...                              ++++                               
T Consensus        78 ~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  156 (253)
T cd05122          78 FC-SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT  156 (253)
T ss_pred             cC-CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence            99 999999987553                              1111                               


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHH
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD  191 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (228)
                                  .....++.++||||||+++++|++  +..||...+............     .+..+.+..++.++.+
T Consensus       157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  229 (253)
T cd05122         157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE--GKPPYSELPPMKALFKIATNG-----PPGLRNPEKWSDEFKD  229 (253)
T ss_pred             eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh--CCCCCCCCchHHHHHHHHhcC-----CCCcCcccccCHHHHH
Confidence                        112235788999999999999999  568888765544433332211     1122233345889999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q psy796          192 LMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       192 li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+||+.+|++|||+.+++.+
T Consensus       230 ~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         230 FLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHccCChhhCCCHHHHhcC
Confidence            9999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.91  E-value=7.1e-23  Score=165.63  Aligned_cols=175  Identities=17%  Similarity=0.207  Sum_probs=127.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC---CCCCcceeeeeeeCC---
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL---QDPNLVSILGVCTGE---   96 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l---~h~niv~~~g~~~~~---   96 (228)
                      +|++.+.||+|+||.||++....   +++.||+|.++         ....+|+.+++.+   +|+||+++++++...   
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC---CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence            36788999999999999998876   78899999884         2456788777665   799999999988643   


Q ss_pred             --CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           97 --QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        97 --~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                        ...+++|||+ + ++|.+++...                               +|++                    
T Consensus        78 ~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          78 RETKVTLVFEHV-D-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             CCceEEEEEccc-c-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence              3468999998 7 6888877542                               2222                    


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC---Cccc
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG---ELQV  177 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~  177 (228)
                                             ..+..++.++|||||||+++||++  +.+||.+.+..+....+.......   .++.
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07863         156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR--RKPLFCGNSEADQLGKIFDLIGLPPEDDWPR  233 (288)
T ss_pred             ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh--CCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence                                   223457889999999999999998  668887766655444433321100   0000


Q ss_pred             -----------cC-----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 -----------FL-----PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 -----------~~-----~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                 ..     .....+++++.+++.+|++.||++|||+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                       00     0113467889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0586|consensus

Probab=99.91  E-value=6.3e-24  Score=179.23  Aligned_cols=168  Identities=20%  Similarity=0.294  Sum_probs=145.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ..+.+..+||+|.|++|.++.+..   .+..||||.+.         ..+.+|++++..++|||||+++.+...+..+++
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            457788999999999999999876   78999999994         336899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      ||||+ .+|.+++||..+                             |||+                             
T Consensus       133 V~eya-~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  133 VMEYA-SGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             EEEec-cCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccc
Confidence            99999 999999999766                             4444                             


Q ss_pred             --------------ccc-CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 --------------RDR-DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 --------------~~~-~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                    +.+ ...++++|+||+|+++|-|+.  |..||++.+...+..+...+        ++-.|...+.+
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~--GsLPFDG~~lk~Lr~rvl~g--------k~rIp~~ms~d  281 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVE--GSLPFDGQNLKELRPRVLRG--------KYRIPFYMSCD  281 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeee--cccccCCcccccccchheee--------eecccceeech
Confidence                          222 244699999999999999999  78999998888877766555        34456778899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++++|.+++-.+|.+|++++++.+
T Consensus       282 ce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  282 CEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             hHHHHHHhhccCccccCCHHHhhh
Confidence            999999999999999999999986

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.2e-23  Score=161.62  Aligned_cols=168  Identities=21%  Similarity=0.417  Sum_probs=133.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|++|.||++....   .+..|++|.+.         ..+.+|++++.+++|+|++++++++...+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLE---TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcC---CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE
Confidence            36788999999999999998765   67889999883         3478899999999999999999999888889999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      +||+ ++++|.+++...                             ++++                              
T Consensus        78 ~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  156 (254)
T cd06627          78 LEYA-ENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDD  156 (254)
T ss_pred             EecC-CCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccc
Confidence            9999 999999988653                             2221                              


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    ......+.++||||+|+++++|++  +..||...+...........   .    ....+..++.++
T Consensus       157 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~  227 (254)
T cd06627         157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLT--GNPPYYDLNPMAALFRIVQD---D----HPPLPEGISPEL  227 (254)
T ss_pred             cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHh--CCCCCCCccHHHHHHHHhcc---C----CCCCCCCCCHHH
Confidence                          112235678999999999999999  56888776654433333211   1    234466788999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .+++.+||..+|++||++.+++.
T Consensus       228 ~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         228 KDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHHhCChhhCcCHHHHhc
Confidence            99999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.91  E-value=6.3e-23  Score=166.26  Aligned_cols=176  Identities=16%  Similarity=0.239  Sum_probs=128.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|++|.||+|....   .++.|++|.+.        ..+.+|++++++++|+||+++++++...+..+++
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKL---TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcC---CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            568889999999999999998765   67899999884        3357899999999999999999999988899999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ . ++|.+++.+.                              ++|+                             
T Consensus        82 ~e~~-~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          82 FEYL-D-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT  159 (291)
T ss_pred             EecC-C-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence            9999 7 5898877542                              2222                             


Q ss_pred             ---------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHHHhhhCCCccc---------
Q psy796          124 ---------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQV---------  177 (228)
Q Consensus       124 ---------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~---------  177 (228)
                                     . ....++.++||||||+++|||++  |..||.+.. ..+....+...........         
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMAT--GRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE  237 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHh--CCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence                           0 11236778999999999999999  568887654 2222222221110000000         


Q ss_pred             ----c--C-------CCCCCCc--HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 ----F--L-------PKPSLCP--RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ----~--~-------~~~~~~~--~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                          .  .       ......+  .++.+++.+|++.+|.+|||+.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence                0  0       0001233  778899999999999999999998763

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.91  E-value=1.1e-22  Score=161.15  Aligned_cols=169  Identities=25%  Similarity=0.392  Sum_probs=132.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCeE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPWL  101 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~l  101 (228)
                      |...+.||+|++|.||+|....   ++..|++|.+.         ..+.+|+..+++++|+|++++++.+...  ...++
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   78 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKD---TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI   78 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence            5677899999999999998865   67899999873         3478899999999999999999999887  77899


Q ss_pred             EEeeccccCCHHHHhhhCC-----------------------------ccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSAD-----------------------------NLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~r-----------------------------~l~-----------------------------  123 (228)
                      ++||+ ++++|.+++....                             +++                             
T Consensus        79 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          79 FLEYV-SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EEEec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence            99999 9999999886541                             111                             


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-HHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                       ......+.++||||||+++++|++  |..||..... ......+..   .   ......+..+
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~---~---~~~~~~~~~~  229 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT--GKPPWSELGNPMAALYKIGS---S---GEPPEIPEHL  229 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCchHHHHHhccc---c---CCCcCCCccc
Confidence                             111236788999999999999999  5688876652 222222211   0   0123345667


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|.+||++.+++.+
T Consensus       230 ~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         230 SEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            8999999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.91  E-value=2.5e-23  Score=165.87  Aligned_cols=168  Identities=18%  Similarity=0.308  Sum_probs=125.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      |.+.+.||+|+||.||++....   .+..+++|.++            ..+.+|+.++..++|+||+++++.+.+.+..+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKK---AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFC   78 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecC---CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceE
Confidence            6778999999999999998865   33334444332            23567889999999999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------r~l~------------------------  123 (228)
                      +++||+ ++++|.+++...                                 ++++                        
T Consensus        79 lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~  157 (260)
T cd08222          79 IITEYC-EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMG  157 (260)
T ss_pred             EEEEeC-CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCC
Confidence            999999 999998877531                                 1111                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++|+||||+++|+|++  +..||...........+....       ....+..
T Consensus       158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  228 (260)
T cd08222         158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC--LAHAFEGQNFLSVVLRIVEGP-------TPSLPET  228 (260)
T ss_pred             CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh--CCCCCCCccHHHHHHHHHcCC-------CCCCcch
Confidence                               112234668999999999999999  567887655544443332211       2223556


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.++.+++.+||..+|++||++.+++++
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         229 YSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             hcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            78899999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=3e-23  Score=173.25  Aligned_cols=178  Identities=18%  Similarity=0.319  Sum_probs=127.4

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ...|++.+.||+|+||.||+|....   .+..||+|... .....|+.++++++|+||+++++++......++++|++ .
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~  140 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPG---QPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-S  140 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECC---CCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-C
Confidence            3468999999999999999999865   67899999864 44678999999999999999999999888899999998 5


Q ss_pred             cCCHHHHhhhC------------------------------Cccc-----------------------------------
Q psy796          109 LGDLVQHLNSA------------------------------DNLT-----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~------------------------------r~l~-----------------------------------  123 (228)
                       ++|.+++...                              |||+                                   
T Consensus       141 -~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt  219 (357)
T PHA03209        141 -SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGT  219 (357)
T ss_pred             -CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccccccccc
Confidence             7888887542                              3333                                   


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH----------HHHHHHHHhhh-CCCcc--------
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----------QVIQNAEHMYY-GGELQ--------  176 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~----------~~~~~~~~~~~-~~~~~--------  176 (228)
                              .....++.++|||||||++|||++++ .++|......          .+...+..... .....        
T Consensus       220 ~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~-~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  298 (357)
T PHA03209        220 VETNAPEVLARDKYNSKADIWSAGIVLFEMLAYP-STIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLV  298 (357)
T ss_pred             ccccCCeecCCCCCCchhhHHHHHHHHHHHHHcC-CccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHH
Confidence                    23346788999999999999999963 4444432211          11111110000 00000        


Q ss_pred             ---------ccCC-------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ---------VFLP-------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ---------~~~~-------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               .+.+       ....++.++.++|.+||+.||.+|||+.++++|
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        299 RGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             HHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence                     0000       012356678889999999999999999999874

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.90  E-value=9.5e-23  Score=164.24  Aligned_cols=174  Identities=19%  Similarity=0.275  Sum_probs=128.5

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecchH--------HHHHHHHHHhhCC-CCCcceeeeeeeCC--CCCeE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG--------DSLREIRFLSSLQ-DPNLVSILGVCTGE--QPPWL  101 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~--------~~~~e~~~l~~l~-h~niv~~~g~~~~~--~~~~l  101 (228)
                      |++.+.||+|+||.||++....   ++..||+|.++.        ...+|+..+.++. |+|++++++++.+.  +..++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRK---TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcC---CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            4577889999999999998865   678999998852        2356888888885 99999999999877  78899


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + ++|.+++...                              ++++                            
T Consensus        78 v~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~  155 (282)
T cd07831          78 VFELM-D-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPY  155 (282)
T ss_pred             EEecC-C-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCc
Confidence            99998 7 6888877542                              1111                            


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----------ccc
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----------QVF  178 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~  178 (228)
                                     .....++.++|||||||++|||++  +..||.+.+..+....+.........          ...
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS--LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN  233 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc--CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence                           112345789999999999999999  56899877665544444322110000          000


Q ss_pred             CCC-----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LPK-----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~~-----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...           ...++.++.+++.+||+.+|++||++.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            111           12467899999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=6.1e-23  Score=165.36  Aligned_cols=164  Identities=18%  Similarity=0.265  Sum_probs=124.7

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   .++.|++|.+.          ..+.+|++++..++|+|++++++.+...+..+++|||+ +
T Consensus         1 lg~g~~g~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~-~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKA---TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM-N   76 (277)
T ss_pred             CCCCCceeEEEEEEcC---CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC-C
Confidence            6999999999998765   67899999873          23467999999999999999999998888899999999 9


Q ss_pred             cCCHHHHhhhC-------------------------------Cccc----------------------------------
Q psy796          109 LGDLVQHLNSA-------------------------------DNLT----------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-------------------------------r~l~----------------------------------  123 (228)
                      +++|.+++...                               ++|+                                  
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05577          77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAG  156 (277)
T ss_pred             CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccC
Confidence            99999888643                               1111                                  


Q ss_pred             ---------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 ---------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 ---------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                               ..+..++.++||||||+++++|++  |..||...........+.......    ....+..++.++.+++.
T Consensus       157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~  230 (277)
T cd05577         157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIA--GRSPFRQRKEKVEKEELKRRTLEM----AVEYPDKFSPEAKDLCE  230 (277)
T ss_pred             CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhh--CCCCCCCCcccccHHHHHhccccc----cccCCccCCHHHHHHHH
Confidence                     122346778999999999999999  668887654422222222211110    22345567899999999


Q ss_pred             HhhccCCCCCC-----CHHHHHH
Q psy796          195 DCWKRDQTMRP-----TFKQIYS  212 (228)
Q Consensus       195 ~c~~~~p~~Rp-----s~~~v~~  212 (228)
                      +||+.+|.+||     ++.+++.
T Consensus       231 ~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         231 ALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHccCChhHccCCCcccHHHHHh
Confidence            99999999999     6666765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.90  E-value=5.7e-23  Score=165.82  Aligned_cols=174  Identities=22%  Similarity=0.315  Sum_probs=129.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |++.+.||+|++|.||+|....   ++..|++|.+.         ..+.+|++.++.++|+|++++++++.+.+..+++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKL---TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcC---CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence            4567889999999999999865   68899999874         45778999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhCC-------------------------------ccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSAD-------------------------------NLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~r-------------------------------~l~-----------------------------  123 (228)
                      ||+ . ++|.+++....                               +++                             
T Consensus        78 e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~  155 (283)
T cd07835          78 EFL-D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT  155 (283)
T ss_pred             ecc-C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence            998 6 68888875431                               111                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC--------------
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG--------------  173 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------------  173 (228)
                                      .....++.++||||||+++|||++  |..||...+.......+.......              
T Consensus       156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd07835         156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN--RRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY  233 (283)
T ss_pred             cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence                            011235778999999999999999  568887766543332222110000              


Q ss_pred             -------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 -------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 -------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                             ...........++.++.+++.+||+.+|++|||+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                   0000001124567889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.90  E-value=1.1e-22  Score=164.16  Aligned_cols=175  Identities=21%  Similarity=0.293  Sum_probs=131.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||+|....   ++..|++|.+.         ..+.+|+.++++++|+|++++++++......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v   77 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE---TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV   77 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC---CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE
Confidence            36788999999999999999865   67899999884         4578899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      +||+  +++|.+++...                              +|++                             
T Consensus        78 ~e~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (286)
T cd07832          78 MEYM--PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR  155 (286)
T ss_pred             eccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence            9997  69998887532                              2222                             


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                       .....++.++||||+|++++||++  +.++|.+.+.......+.........           
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07832         156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLN--GSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD  233 (286)
T ss_pred             ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHc--CCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence                             011235789999999999999999  56788776655444333322110000           


Q ss_pred             --cccCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 --QVFLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 --~~~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                        ....+         .....+.++.+++.+||+.+|.+||++++++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence              00000         012456889999999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0663|consensus

Probab=99.90  E-value=2e-23  Score=165.17  Aligned_cols=176  Identities=21%  Similarity=0.297  Sum_probs=134.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---------HHHHHHHHHhhCCCCCcceeeeeeeCCC--CC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---------DSLREIRFLSSLQDPNLVSILGVCTGEQ--PP   99 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---------~~~~e~~~l~~l~h~niv~~~g~~~~~~--~~   99 (228)
                      ++|+..+.|++|+||.||+|+..+   ++..||+|.++.         ...|||.+|.+++|+|||.+-.+....+  .+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~---t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKK---TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCC---cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            356677899999999999999987   889999999962         2589999999999999999988887653  68


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      |+||||| + .+|...+...                              |||+                          
T Consensus       153 y~VMe~~-E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  153 YIVMEYV-E-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             eeeHHHH-H-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence            9999999 6 6776655432                              6666                          


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh--CCCccccCC--
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY--GGELQVFLP--  180 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~--  180 (228)
                                         +....|+.+.|+||+||++.||++  +.+-|.+.+-.+....+-....  .+...+-+.  
T Consensus       231 ~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~--~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  231 LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLT--QKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHh--cCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence                               555679999999999999999999  6688888776665555544321  111111110  


Q ss_pred             -------C---C----------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 -------K---P----------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 -------~---~----------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                             +   |          ..+++.-.+|+...+.+||.+|.|+++.+.+
T Consensus       309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence                   0   1          1145788899999999999999999998864

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.90  E-value=4.7e-23  Score=165.68  Aligned_cols=169  Identities=16%  Similarity=0.283  Sum_probs=136.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPP   99 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~   99 (228)
                      ++|.+.+.||+|+||.||++....   ++..|++|.+.          ..+.+|.+++.+++ |+||+++++++...+..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~   77 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKE---TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENL   77 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcC---CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceE
Confidence            367889999999999999999876   78899999884          34678899999998 99999999999888889


Q ss_pred             eEEEeeccccCCHHHHhhhCC-----------------------------ccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSAD-----------------------------NLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~r-----------------------------~l~---------------------------  123 (228)
                      +++|||+ ++++|.+++...+                             +++                           
T Consensus        78 ~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          78 YFVLEYA-PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             EEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence            9999999 9999999886551                             111                           


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           ......+.++||||||++++++++  |..||...+.......+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~  234 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLT--GKPPFRGSNEYLTFQKI  234 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHh--CCCCCCCccHHHHHHHH
Confidence                                                 011234678999999999999999  67899877655554444


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCH----HHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF----KQIYSF  213 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~----~~v~~~  213 (228)
                      ...        ....+..+++.+.+++.+||+.+|.+||++    ++++++
T Consensus       235 ~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         235 LKL--------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             Hhc--------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            322        334566788999999999999999999999    777653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.90  E-value=1.1e-22  Score=166.38  Aligned_cols=178  Identities=22%  Similarity=0.285  Sum_probs=133.2

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--C
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--Q   97 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~   97 (228)
                      +-++|++.+.||+|+||.||+|....   .+..||+|.++         ..+.+|+.++.+++|+|++++++++...  +
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTT---SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD   81 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECC---CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence            34678899999999999999999865   68899999884         2356899999999999999999998765  4


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ . ++|.+++...                              ++|+                        
T Consensus        82 ~~~lv~e~~-~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          82 SIFLVMEYC-E-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             eEEEEEecC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            579999998 6 5787776532                              2222                        


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc-----
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV-----  177 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----  177 (228)
                                           .....++.++||||||+++|||++  |.+||...+..+....+...........     
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07845         160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLA--HKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS  237 (309)
T ss_pred             CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence                                 112346789999999999999999  6689988777766655544321100000     


Q ss_pred             ------cCCC-----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 ------FLPK-----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ------~~~~-----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ....           ....++++.+++.+||+.||++|||+.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                  0000           01247789999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.90  E-value=6.4e-23  Score=169.28  Aligned_cols=176  Identities=18%  Similarity=0.277  Sum_probs=127.7

Q ss_pred             eeeccc--ceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSC--HLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G--~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ..||+|  +||.||++....   .++.||+|.+.         +.+.+|+.+++.++|+||+++++++......++++||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~   80 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTP---TGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF   80 (328)
T ss_pred             HHhCCcccCceeEEEEEEcC---CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence            356666  999999998765   78999999974         3467889999999999999999999998899999999


Q ss_pred             ccccCCHHHHhhhC-------------------------------Cccc-------------------------------
Q psy796          106 PAQLGDLVQHLNSA-------------------------------DNLT-------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-------------------------------r~l~-------------------------------  123 (228)
                      + .+++|.+++...                               +|++                               
T Consensus        81 ~-~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~  159 (328)
T cd08226          81 M-AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK  159 (328)
T ss_pred             c-cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence            9 999999887642                               3333                               


Q ss_pred             --------------------c--ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC-------
Q psy796          124 --------------------R--DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE-------  174 (228)
Q Consensus       124 --------------------~--~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------  174 (228)
                                          .  ....++.++||||||++++||++  |..||.+..................       
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (328)
T cd08226         160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT--GRVPFQDMLRTQMLLQKLKGPPYSPLDITTFP  237 (328)
T ss_pred             ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCcChHHHHHHHhcCCCCCCccccccc
Confidence                                0  00235678999999999999999  6789977654433222111000000       


Q ss_pred             --------------------------------ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHHh
Q psy796          175 --------------------------------LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRST  218 (228)
Q Consensus       175 --------------------------------~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~~  218 (228)
                                                      .....+.+..++..+.+++.+||+.+|++|||+.++++  .+..+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence                                            00001112335678999999999999999999999986  455553

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.90  E-value=1.3e-22  Score=163.65  Aligned_cols=175  Identities=20%  Similarity=0.297  Sum_probs=130.9

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +|+..+.||+|++|.||+|....   .+..|++|.++        ..+.+|+.+++.++|+|++++++++...+..+++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   77 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRT---TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF   77 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECC---CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence            47888999999999999999865   67899999874        34678999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC--------------------------------Cccc----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA--------------------------------DNLT----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~--------------------------------r~l~----------------------------  123 (228)
                      ||+ + ++|.+++...                                ++++                            
T Consensus        78 e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          78 EYM-D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             ecC-C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            999 7 5888876532                                1111                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------------C
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------------E  174 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------~  174 (228)
                                       .....++.++||||||+++|||++  |..||.+.+..+....+.......            .
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT--GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE  233 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence                             011235778999999999999999  568888776655444332221100            0


Q ss_pred             ccccCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQVFLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .....+         ..+.++.++.+++.+||+.+|.+||++.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            000000         012457789999999999999999999999853

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.90  E-value=7.1e-23  Score=167.58  Aligned_cols=173  Identities=22%  Similarity=0.397  Sum_probs=131.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +...|...+.||+|+||.||+|....   .+..|++|.+.          .++.+|+++++.++|+|++++++++.....
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   89 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT   89 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcC---CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence            44456677889999999999999865   67889999873          346789999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ . |++.+++...                              ++|+                         
T Consensus        90 ~~lv~e~~-~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          90 AWLVMEYC-L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             eEEEEEcc-C-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            99999998 7 6777765422                              2222                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++|||++  |..||...+.......+.....      ....+..+
T Consensus       168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~  239 (308)
T cd06634         168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHW  239 (308)
T ss_pred             cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc--CCCCCccccHHHHHHHHhhcCC------CCcCcccc
Confidence                              012456789999999999999999  5678876655444433332110      11123467


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      +..+.+++.+||+.+|.+||++.+++.+.
T Consensus       240 ~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             cHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            88999999999999999999999998763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.90  E-value=9.7e-23  Score=164.36  Aligned_cols=170  Identities=20%  Similarity=0.334  Sum_probs=125.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHH-HhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRF-LSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~-l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||++....   ++..||+|.++        ..+..|+.. ++.++|+|++++++++..++..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l   77 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVP---TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI   77 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcC---CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence            368889999999999999999875   78999999874        234556655 556789999999999998889999


Q ss_pred             EEeeccccCCHHHHhhhC----------------------------------Cccc------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA----------------------------------DNLT------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~----------------------------------r~l~------------------------  123 (228)
                      +|||+ + |+|.+++...                                  +|++                        
T Consensus        78 v~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          78 CMEVM-D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             Ehhhh-c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            99998 6 7777665431                                  2222                        


Q ss_pred             -------------------cc----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHHHhhhCCCccccC
Q psy796          124 -------------------RD----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 -------------------~~----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                         ..    ...++.++|+||||+++|||++  |..||.... ..+.........     .+..
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~  228 (283)
T cd06617         156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT--GRFPYDSWKTPFQQLKQVVEEP-----SPQL  228 (283)
T ss_pred             cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh--CCCCCCccccCHHHHHHHHhcC-----CCCC
Confidence                               00    1345788999999999999999  568886532 222222221110     0011


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       229 -~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         229 -PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             -CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             123578999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.90  E-value=9.6e-23  Score=165.03  Aligned_cols=177  Identities=16%  Similarity=0.227  Sum_probs=130.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~   99 (228)
                      +|++.+.||+|+||.||++........+..||+|.++           ..+.+|++++.++ +|+|++++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            3678899999999999999875433367889999884           2356799999999 599999999999888888


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      +++|||+ ++|+|.+++...                             +|++                           
T Consensus        81 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  159 (288)
T cd05583          81 HLILDYV-NGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE  159 (288)
T ss_pred             EEEEecC-CCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence            9999999 999999887643                             1111                           


Q ss_pred             ------------------cccC--CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 ------------------RDRD--RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 ------------------~~~~--~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                        ....  ..+.++||||||++++||++  |..||...........+.......    ..+.+.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~  233 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT--GASPFTVDGEQNSQSEISRRILKS----KPPFPK  233 (288)
T ss_pred             ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHh--CCCCcccCcccchHHHHHHHHHcc----CCCCCc
Confidence                              0001  14678999999999999999  668885432221111111111111    234456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK  215 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~  215 (228)
                      .++.++.+++.+||+.+|++|||+.++...|+
T Consensus       234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            67889999999999999999999887765443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.9e-22  Score=160.26  Aligned_cols=171  Identities=20%  Similarity=0.307  Sum_probs=131.1

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.+|++.+.||+|+||.||+|....   ++..|++|.+.            ..+.+|++++++++|+||+++++++.+..
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~   77 (264)
T cd06653           1 PVNWRLGKLLGRGAFGEVYLCYDAD---TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE   77 (264)
T ss_pred             CCceeeeeeEccCCCeEEEEEEEcC---CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC
Confidence            3578899999999999999998765   67899999762            34678999999999999999999987643


Q ss_pred             --CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           98 --PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        98 --~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                        ..++++||+ ++++|.+++...                             ++++                       
T Consensus        78 ~~~~~~v~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          78 EKKLSIFVEYM-PGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             CCEEEEEEEeC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence              468999999 999999887643                             1111                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              ..+...+.++|+||||++++||++  |..||...........+...   .   ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~---~---~~~  228 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT--EKPPWAEYEAMAAIFKIATQ---P---TKP  228 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHh--CCCCCCccCHHHHHHHHHcC---C---CCC
Confidence                                    112235678999999999999999  66899776554433322211   1   123


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..|...++++.+++.+||+. +..||++.+++.|
T Consensus       229 ~~p~~~~~~~~~~i~~~l~~-~~~r~~~~~~~~~  261 (264)
T cd06653         229 MLPDGVSDACRDFLKQIFVE-EKRRPTAEFLLRH  261 (264)
T ss_pred             CCCcccCHHHHHHHHHHhcC-cccCccHHHHhcC
Confidence            34667889999999999994 7999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=1.3e-22  Score=166.44  Aligned_cols=168  Identities=21%  Similarity=0.389  Sum_probs=129.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +...+.||+|+||.||+|....   .+..|++|.+.          ..+.+|++++..++|+|++++++++.+.+..+++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSH---TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            4455779999999999998765   67899999873          3467899999999999999999999998889999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ . |++.+++...                              ++++                             
T Consensus       100 ~e~~-~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~  177 (313)
T cd06633         100 MEYC-L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSF  177 (313)
T ss_pred             EecC-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCc
Confidence            9998 6 6777766432                              1111                             


Q ss_pred             -----------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -----------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -----------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                 .   ....++.++||||||+++|||++  |..||...+.......+.....      .......++..+
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l  249 (313)
T cd06633         178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQNDS------PTLQSNEWTDSF  249 (313)
T ss_pred             cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHhcCC------CCCCccccCHHH
Confidence                       0   23456788999999999999999  5688877766554444332110      111233467889


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.+|.+||++.+++.+
T Consensus       250 ~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         250 RGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.90  E-value=1.6e-22  Score=164.61  Aligned_cols=177  Identities=23%  Similarity=0.312  Sum_probs=130.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|++.+.||+|+||.||+|....   .+..|++|.++         ..+.+|+++++.++|+|++++++++....   
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKD---TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECC---CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence            3568888999999999999999875   67899999884         34678999999999999999999987654   


Q ss_pred             -------CCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------
Q psy796           98 -------PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------  123 (228)
Q Consensus        98 -------~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------  123 (228)
                             ..++++||+ + +++..++...                              ++++                 
T Consensus        83 ~~~~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df  160 (302)
T cd07864          83 DFKKDKGAFYLVFEYM-D-HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF  160 (302)
T ss_pred             hccccCCcEEEEEccc-C-ccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence                   678999998 7 4666665432                              1222                 


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                   .....++.++||||||++++||++  |.+||...+..+....+........
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T cd07864         161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT--KKPIFQANQELAQLELISRLCGSPC  238 (302)
T ss_pred             cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCC
Confidence                                         011235778999999999999999  5688877665554444433221110


Q ss_pred             ccc--c--------------------CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQV--F--------------------LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~--~--------------------~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...  .                    ......++..+.+++.+||+.+|.+||++.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            000  0                    00122468899999999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.90  E-value=2e-22  Score=163.52  Aligned_cols=176  Identities=22%  Similarity=0.309  Sum_probs=128.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCC--
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQP--   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~--   98 (228)
                      ++|++.+.||+|+||.||+|....   +++.||+|.++         ..+.+|+.++.++. |+||+++++++...+.  
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~   77 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKN---TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG   77 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECC---CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC
Confidence            357889999999999999999875   68899999874         34678999999995 6999999999876654  


Q ss_pred             ---CeEEEeeccccCCHHHHhhhC----------------------------------Cccc------------------
Q psy796           99 ---PWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT------------------  123 (228)
Q Consensus        99 ---~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~------------------  123 (228)
                         .+++|||+ + ++|.+++...                                  ++++                  
T Consensus        78 ~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~df  155 (295)
T cd07837          78 KPSLYLVFEYL-D-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADL  155 (295)
T ss_pred             CceEEEEeecc-C-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeec
Confidence               79999999 7 5788776431                                  1111                  


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                  .....++.++||||||+++|||++  |..||.+.+.......+.........
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~  233 (295)
T cd07837         156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR--KQPLFPGDSELQQLLHIFKLLGTPTE  233 (295)
T ss_pred             ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence                                        011235788999999999999999  56888876655443333221110000


Q ss_pred             c-----------ccCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 Q-----------VFLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~-----------~~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .           ...+         ....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0           0000         013467889999999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0596|consensus

Probab=99.90  E-value=4.8e-23  Score=172.12  Aligned_cols=176  Identities=18%  Similarity=0.313  Sum_probs=135.3

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      +...+..+.|++.+.||+|+-++||++...    +.+.+|+|.+.         ..+.+|+.+|.++ .|.+||.++++-
T Consensus       354 ~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s----~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE  429 (677)
T KOG0596|consen  354 EIIKVKGREYEILKQIGSGGSSKVFKVLNS----DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE  429 (677)
T ss_pred             eeEEECcchhhHHHhhcCCCcceeeeeecC----CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence            456677888999999999999999999876    56778888774         5589999999999 499999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                      ..+..+|+||||  ...+|..+|...                              .||+                    
T Consensus       430 v~d~~lYmvmE~--Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~  507 (677)
T KOG0596|consen  430 VTDGYLYMVMEC--GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIAN  507 (677)
T ss_pred             ccCceEEEEeec--ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhc
Confidence            999999999997  458898888755                              2222                    


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          ......+++|||||+||++|+|++  |.+||....+  .+.++.
T Consensus       508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY--gktPf~~~~n--~~aKl~  583 (677)
T KOG0596|consen  508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY--GKTPFGQIIN--QIAKLH  583 (677)
T ss_pred             ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh--cCCchHHHHH--HHHHHH
Confidence                                                112346799999999999999999  6799976443  233332


Q ss_pred             HhhhCCCccccCCCCCCCc-HHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          168 HMYYGGELQVFLPKPSLCP-RDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ....   +....++|..-+ .++.+++..||+.||.+||++.++++
T Consensus       584 aI~~---P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  584 AITD---PNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             hhcC---CCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            2211   111234443332 34999999999999999999999997

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.2e-23  Score=172.23  Aligned_cols=160  Identities=18%  Similarity=0.276  Sum_probs=124.1

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC---CCCCcceeeeeeeCCCCCeEEEee
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL---QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l---~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ||+|+||.||++....   .+..||+|.+..          ...+|..++...   .|+||+++++.+...+..+++|||
T Consensus         1 lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~   77 (330)
T cd05586           1 IGKGTFGQVYQVRKKD---TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY   77 (330)
T ss_pred             CCCCCceEEEEEEECC---CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence            6999999999998865   688999999842          133455666554   699999999999988899999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             |||+                                 
T Consensus        78 ~-~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~  156 (330)
T cd05586          78 M-SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTF  156 (330)
T ss_pred             C-CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCc
Confidence            9 999998887644                             3333                                 


Q ss_pred             -----------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC-CCCCcHHHH
Q psy796          124 -----------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK-PSLCPRDIY  190 (228)
Q Consensus       124 -----------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~  190 (228)
                                 . ....++.++|||||||++|||++  |..||...+..+....+....        ... ...++.++.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ellt--G~~Pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~  226 (330)
T cd05586         157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCC--GWSPFYAEDTQQMYRNIAFGK--------VRFPKNVLSDEGR  226 (330)
T ss_pred             cCCccccCHHHHcCCCCCCCccceeccccEEEEecc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCccCCHHHH
Confidence                       1 12246889999999999999999  678998877766665554321        112 234789999


Q ss_pred             HHHHHhhccCCCCCC----CHHHHHH
Q psy796          191 DLMCDCWKRDQTMRP----TFKQIYS  212 (228)
Q Consensus       191 ~li~~c~~~~p~~Rp----s~~~v~~  212 (228)
                      +++.+||+.+|.+||    ++.++++
T Consensus       227 ~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         227 QFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            999999999999998    5677665

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.90  E-value=1.3e-22  Score=164.55  Aligned_cols=176  Identities=23%  Similarity=0.335  Sum_probs=130.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPP   99 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~   99 (228)
                      ++|+..+.||+|+||.||+|....   .+..+++|.++         ..+.+|+.++.+++|+||+++++++...  +..
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKK---TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI   81 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECC---CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence            357888999999999999999865   67889999884         2357899999999999999999998876  788


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------------  123 (228)
                      +++|||+ . ++|.+++...                              ++|+                          
T Consensus        82 ~lv~e~~-~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          82 YMVMEYV-E-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             EEEehhc-C-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            9999998 7 6888877543                              1222                          


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------  173 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------  173 (228)
                                         .....++.++|+||||++++||++  |..||...+..+....+.......           
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (293)
T cd07843         160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT--KKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL  237 (293)
T ss_pred             ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence                               011235788999999999999999  568888776655444432211100           


Q ss_pred             -----Cc-------cccCCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 -----EL-------QVFLPKPSL-CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 -----~~-------~~~~~~~~~-~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                           ..       ......+.. +++.+.+++.+||+.+|++|||+.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                 00       000011222 57889999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2e-22  Score=172.84  Aligned_cols=176  Identities=19%  Similarity=0.288  Sum_probs=126.2

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccccC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLG  110 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g  110 (228)
                      .|.+.+.||+|+||.||++....   .++.||+|... ..+.+|++++++++|+||+++++++......+++||++ . +
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~---~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~-~  244 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPD---YPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-R-S  244 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECC---CCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-C-C
Confidence            58888999999999999998875   67899999763 45779999999999999999999998888889999998 5 7


Q ss_pred             CHHHHhhhC------------------------------Cccc-------------------------------------
Q psy796          111 DLVQHLNSA------------------------------DNLT-------------------------------------  123 (228)
Q Consensus       111 ~L~~~l~~~------------------------------r~l~-------------------------------------  123 (228)
                      +|.+++...                              |||+                                     
T Consensus       245 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~G  324 (461)
T PHA03211        245 DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAG  324 (461)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCC
Confidence            888887532                              3333                                     


Q ss_pred             ---------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC-------ChHHHHHHHHHhhhC-CCc-----------
Q psy796          124 ---------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL-------TNEQVIQNAEHMYYG-GEL-----------  175 (228)
Q Consensus       124 ---------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-------~~~~~~~~~~~~~~~-~~~-----------  175 (228)
                               ..+..++.++|||||||++|||++++ ...|...       ...++...+...... ...           
T Consensus       325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~-~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~  403 (461)
T PHA03211        325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT-ASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQ  403 (461)
T ss_pred             CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC-CCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHH
Confidence                     22335678899999999999999853 2233221       112222222211100 000           


Q ss_pred             ---------cccCCCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ---------QVFLPKP-----SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ---------~~~~~~~-----~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               .+....+     ...+.++.+|+.+||+.||.+|||+.|++++
T Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        404 YRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                     0000000     1245689999999999999999999999975

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.90  E-value=2.9e-22  Score=162.68  Aligned_cols=176  Identities=20%  Similarity=0.301  Sum_probs=130.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|.+|.||+|....   +++.|++|.+.         ..+.+|++++++++|+|++++++++...+..++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRV---TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYL   78 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecC---CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEE
Confidence            458889999999999999998865   67899999884         346789999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ + ++|.+++...                               ++++                           
T Consensus        79 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         79 VFEYL-D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             EEecc-c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            99998 6 5777666432                               1111                           


Q ss_pred             ------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc---------
Q psy796          124 ------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL---------  175 (228)
Q Consensus       124 ------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------  175 (228)
                                        . ....++.++||||||+++|+|++  |..||......+....+.........         
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN--QKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL  234 (294)
T ss_pred             ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence                              0 11235678999999999999999  56888776654443332221110000         


Q ss_pred             ------cccCC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ------QVFLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ------~~~~~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            .+...      .....+.++.+++.+|++.+|++||++.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  00000      123467889999999999999999999999863

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.7e-22  Score=161.08  Aligned_cols=166  Identities=16%  Similarity=0.192  Sum_probs=123.6

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHH-hhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFL-SSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l-~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.||+|+||.||+|....   .++.||+|.++.          .+..|..++ ....|+|++++++++...+..++++||
T Consensus         2 ~~l~~g~~~~v~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (260)
T cd05611           2 KPISKGAFGSVYLAKKRS---TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY   78 (260)
T ss_pred             ccCCcCCCeeEEEEEecC---CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence            468999999999998865   678999998841          123344443 345899999999999988889999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++++|.+++...                             ++|+                                 
T Consensus        79 ~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (260)
T cd05611          79 L-NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTP  157 (260)
T ss_pred             c-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCc
Confidence            9 999999988653                             1222                                 


Q ss_pred             -------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHh
Q psy796          124 -------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDC  196 (228)
Q Consensus       124 -------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  196 (228)
                             ..+..++.++||||||++++||++  |..||...+.......+......    ........++.++.+++.+|
T Consensus       158 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~  231 (260)
T cd05611         158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLF--GYPPFHAETPDAVFDNILSRRIN----WPEEVKEFCSPEAVDLINRL  231 (260)
T ss_pred             CccChhhhcCCCCcchhhhHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhcccC----CCCcccccCCHHHHHHHHHH
Confidence                   112335789999999999999999  67999887776665554432111    01122345789999999999


Q ss_pred             hccCCCCCCCHHHHHH
Q psy796          197 WKRDQTMRPTFKQIYS  212 (228)
Q Consensus       197 ~~~~p~~Rps~~~v~~  212 (228)
                      |+.+|++||++.++.+
T Consensus       232 l~~~p~~R~~~~~~~~  247 (260)
T cd05611         232 LCMDPAKRLGANGYQE  247 (260)
T ss_pred             ccCCHHHccCCCcHHH
Confidence            9999999997654433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0658|consensus

Probab=99.90  E-value=2.5e-23  Score=166.22  Aligned_cols=178  Identities=18%  Similarity=0.252  Sum_probs=136.1

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----CCeEEEe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----PPWLVME  104 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----~~~lv~e  104 (228)
                      +.-.+++|+|+||.||+|....   +...||||.+.   +-..+|.++|+.+.|||||++.-+|....     ...+|||
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e---~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle  102 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRE---TEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE  102 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcC---CCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence            4556899999999999999986   67999999994   34578999999999999999988775432     2459999


Q ss_pred             eccccCCHHHHhhhC---------------------------------Cccc----------------------------
Q psy796          105 YPAQLGDLVQHLNSA---------------------------------DNLT----------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~---------------------------------r~l~----------------------------  123 (228)
                      |+ | -+|.++++..                                 ||+|                            
T Consensus       103 ym-P-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  103 YM-P-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             hc-h-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence            99 8 7998888731                                 5655                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                       +....|+.+.||||.||++.||+-  |.+-|.+.+..+....+.........           
T Consensus       181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~--g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~  258 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLK--GQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT  258 (364)
T ss_pred             CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhc--CCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence                             556679999999999999999999  66889988876655444433211100           


Q ss_pred             ---cccCC-------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          176 ---QVFLP-------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       176 ---~~~~~-------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                         .+.+.       .....+.++.+++.++++++|.+|.++.+++.  .++.+
T Consensus       259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence               00000       12346789999999999999999999999886  45555

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.90  E-value=2e-22  Score=163.84  Aligned_cols=174  Identities=20%  Similarity=0.265  Sum_probs=129.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      |++.+.||+|+||.||+|....   .++.|++|.++            ..+.+|++++.+++|+||+++++++...+..+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKE---TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNIN   78 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECC---CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEE
Confidence            6778899999999999999865   67899999984            22467999999999999999999999988899


Q ss_pred             EEEeeccccCCHHHHhhhCC------------------------------ccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSAD------------------------------NLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~r------------------------------~l~---------------------------  123 (228)
                      +||||+  +|+|.+++....                              +|+                           
T Consensus        79 lv~e~~--~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          79 LVFEFM--ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             EEEccc--CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence            999998  589999886531                              111                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------------  173 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------  173 (228)
                                        .....++.++||||||++++||++  |.++|.+.+..+....+.......            
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (298)
T cd07841         157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLL--RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP  234 (298)
T ss_pred             ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHc--CCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence                              012345788999999999999999  557777666544433332211000            


Q ss_pred             Cccc---cCC-----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ELQV---FLP-----KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ~~~~---~~~-----~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....   ..+     .....+.++.+++.+||+.+|.+|||+.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000   000     013456889999999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=1e-22  Score=168.94  Aligned_cols=180  Identities=19%  Similarity=0.227  Sum_probs=129.5

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      |+++ ++|.+.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++++++|+||+++++++...
T Consensus        11 ~~~~-~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07878          11 WEVP-ERYQNLTPVGSGAYGSVCSAYDTR---LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA   86 (343)
T ss_pred             hhhh-hhhhhheecccCCCeEEEEEEECC---CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence            3443 558889999999999999998765   67899999884         3366899999999999999999987543


Q ss_pred             ------CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-------------------
Q psy796           97 ------QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-------------------  123 (228)
Q Consensus        97 ------~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------  123 (228)
                            ...+++++++  +++|.+++...                            +||+                   
T Consensus        87 ~~~~~~~~~~~~~~~~--~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          87 TSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             ccccccCcEEEEeecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCcc
Confidence                  2458999986  58887766432                            3333                   


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----  175 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----  175 (228)
                                             .....++.++|||||||+++||++  |..||.+.+..+....+.........     
T Consensus       165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07878         165 ARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLK--GKALFPGNDYIDQLKRIMEVVGTPSPEVLKK  242 (343)
T ss_pred             ceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence                                   111356789999999999999999  66888876655444333221110000     


Q ss_pred             ------------cccCCC------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ------------QVFLPK------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ------------~~~~~~------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                  .+..+.      ....++.+.+++.+|++.||.+|||+.+++.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                        000000      12345678999999999999999999999974

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.89  E-value=2.1e-22  Score=166.73  Aligned_cols=180  Identities=19%  Similarity=0.254  Sum_probs=129.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----   97 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.+.        ..+.+|+.++++++|+||+++++++...+     
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKP---TGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcC---CCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            468899999999999999998865   67899999873        34678999999999999999998876543     


Q ss_pred             CCeEEEeeccccCCHHHHhhhC----------------------------Cccc--------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT--------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~--------------------------  123 (228)
                      ..++++||+ . ++|.+++...                            +||+                          
T Consensus        82 ~~~lv~e~~-~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          82 DVYIVQELM-E-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             eEEEEehhc-c-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            468999998 6 5777665432                            2222                          


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC--------
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG--------  173 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------  173 (228)
                                            .....++.++||||||++++||++  |..||.+.+.......+.......        
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~--G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLS--NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI  237 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence                                  112346778999999999999999  568887665443332222111000        


Q ss_pred             ------------CccccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 ------------ELQVFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ------------~~~~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                  ......+   .....+.++.+++.+||+.+|++|||+.+++++  ++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence                        0000000   012457789999999999999999999999986  5554

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0660|consensus

Probab=99.89  E-value=1.2e-22  Score=162.01  Aligned_cols=186  Identities=23%  Similarity=0.301  Sum_probs=140.9

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.++++.. +...+.||.|.+|.|..+..+.   ++..||||.+.         ++-.||+.+|+.++|+||+.+++++.
T Consensus        16 ~~~~i~~~-y~~~~~iG~GAyGvVcsA~~~~---t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   16 ELFEIPRY-YVLIEPIGRGAYGVVCSAKDKR---TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             eEEeccce-ecccccccCcceeeEEEEEEcC---CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            45566655 3347889999999999999887   78999999994         44678999999999999999999987


Q ss_pred             CC-----CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------
Q psy796           95 GE-----QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------  123 (228)
Q Consensus        95 ~~-----~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------  123 (228)
                      ..     +.+|+|+|++ + .+|...++..                             |||+                 
T Consensus        92 p~~~~~f~DvYiV~elM-e-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DF  169 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELM-E-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDF  169 (359)
T ss_pred             cccccccceeEEehhHH-h-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccc
Confidence            62     3689999998 5 7888877665                             4444                 


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh--
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY--  171 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~--  171 (228)
                                                    +....||.+.||||.||++.||++  |++-|.+.+..+....+.....  
T Consensus       170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~--gkplFpG~d~v~Ql~lI~~~lGtP  247 (359)
T KOG0660|consen  170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLT--GKPLFPGKDYVHQLQLILELLGTP  247 (359)
T ss_pred             cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHc--CCCCCCCCchHHHHHHHHHhcCCC
Confidence                                          556689999999999999999999  5677877766544444333211  


Q ss_pred             ------------------CCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          172 ------------------GGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       172 ------------------~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                        .....+..++   -++.++...+|+.+++..||.+|+|+++.++|  |+.+
T Consensus       248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence                              1110111111   13578899999999999999999999999874  4444

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.89  E-value=1.2e-22  Score=161.75  Aligned_cols=160  Identities=24%  Similarity=0.317  Sum_probs=126.2

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   .+..+++|.+.          ..+.+|++++.+++|+|++++++.+......++++||+ +
T Consensus         1 lg~g~~~~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKKS---TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL-P   76 (265)
T ss_pred             CCCCCceEEEEEEECC---CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC-C
Confidence            6899999999999865   68899999884          34678899999999999999999998888899999999 9


Q ss_pred             cCCHHHHhhhC-----------------------------Cccc------------------------------------
Q psy796          109 LGDLVQHLNSA-----------------------------DNLT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~-----------------------------r~l~------------------------------------  123 (228)
                      +++|.+++.+.                             ++++                                    
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          77 GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence            99999988653                             1111                                    


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC--C
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL--C  185 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  185 (228)
                                      ......+.++||||||++++||++  |..||...........+...        ....+..  .
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~  226 (265)
T cd05579         157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLV--GIPPFHGETPEEIFQNILNG--------KIEWPEDVEV  226 (265)
T ss_pred             cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcC--------CcCCCccccC
Confidence                            001224568999999999999999  67899877776665555432        2223333  3


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +.++.+++.+||+.+|.+|||+..+.+
T Consensus       227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~  253 (265)
T cd05579         227 SDEAIDLISKLLVPDPEKRLGAKSIEE  253 (265)
T ss_pred             CHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence            899999999999999999999954444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.89  E-value=3.5e-22  Score=162.48  Aligned_cols=179  Identities=19%  Similarity=0.319  Sum_probs=131.0

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      .+.+.+..+++++.+.||+|+||.||+|.+..   .+..||+|.++        ..+.+|+..+.+. .|+||+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~   83 (296)
T cd06618           7 GQKYPADLNDLENLGEIGSGTCGQVYKMRFKK---TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF   83 (296)
T ss_pred             ceeccCCcchheeeeEeeccCCeEEEEEEECC---CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee
Confidence            46778888999999999999999999999865   58899999984        2345677666666 599999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------  123 (228)
                      .+....+++|||+ + +++.+++...                               ++|+                   
T Consensus        84 ~~~~~~~~v~e~~-~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~  161 (296)
T cd06618          84 ITDSDVFICMELM-S-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGI  161 (296)
T ss_pred             ecCCeEEEEeecc-C-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECcccc
Confidence            9988999999998 6 4554433220                               2222                   


Q ss_pred             ------------------------cc----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-HHHHHHHHHhhhCCC
Q psy796          124 ------------------------RD----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ------------------------~~----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~  174 (228)
                                              ..    ...++.++||||||+++|||++  |..||..... .+....+...   . 
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~---~-  235 (296)
T cd06618         162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT--GQFPYKNCKTEFEVLTKILQE---E-  235 (296)
T ss_pred             chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh--CCCCCCcchhHHHHHHHHhcC---C-
Confidence                                    00    1225678999999999999999  5688865332 2222222211   1 


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       .+..+....++.++.+++.+||+.+|.+||++.+++++
T Consensus       236 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         236 -PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             11222233578899999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.89  E-value=3.9e-22  Score=160.87  Aligned_cols=174  Identities=21%  Similarity=0.310  Sum_probs=129.3

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCeE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPWL  101 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~l  101 (228)
                      |++.+.||+|+||.||+|....   .+..+++|.+.         ..+.+|+++++.++|+|++++++++...  ...++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK---TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC---CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence            4677899999999999999875   67899999995         2477899999999999999999999887  78899


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      ++||+ + ++|.+++...                              ++++                            
T Consensus        78 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~  155 (287)
T cd07840          78 VFEYM-D-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS  155 (287)
T ss_pred             Eeccc-c-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence            99998 7 5888777442                              1111                            


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc---------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ---------  176 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------  176 (228)
                                        .....++.++||||||+++|||++  +..||...+.......+..........         
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07840         156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL--GKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP  233 (287)
T ss_pred             ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence                              012246788999999999999999  568888776655444443321100000         


Q ss_pred             ------ccCC--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ------VFLP--------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ------~~~~--------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ....        ....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                  0000        011137889999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PTZ00284 protein kinase; Provisional

Probab=99.89  E-value=2.2e-22  Score=173.67  Aligned_cols=178  Identities=17%  Similarity=0.228  Sum_probs=124.2

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCC------CCcceeeeeeeC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQD------PNLVSILGVCTG   95 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h------~niv~~~g~~~~   95 (228)
                      +...+|++.+.||+|+||.||++....   .+..||||+++      .+...|++++..++|      .+++++++++..
T Consensus       126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~---~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        126 VSTQRFKILSLLGEGTFGKVVEAWDRK---RKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cCCCcEEEEEEEEeccCEEEEEEEEcC---CCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            345678999999999999999998865   67899999984      345668888777654      458888888876


Q ss_pred             CC-CCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           96 EQ-PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~-~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      +. ..+++|+++  +++|.+++...                              |||+                     
T Consensus       203 ~~~~~~iv~~~~--g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        203 ETGHMCIVMPKY--GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             CCceEEEEEecc--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence            53 578999986  47777665432                              3333                     


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          +.+..++.++|||||||++|||++  |..||.+.+..+....+.
T Consensus       281 ~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ellt--G~~pf~~~~~~~~~~~i~  358 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYT--GKLLYDTHDNLEHLHLME  358 (467)
T ss_pred             CCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHH
Confidence                                                122346788999999999999999  679998877655443332


Q ss_pred             HhhhC---------------------CCccccCC------------C-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          168 HMYYG---------------------GELQVFLP------------K-PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       168 ~~~~~---------------------~~~~~~~~------------~-~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .....                     ....+...            . .......+.+||.+||+.||.+|||+.++++
T Consensus       359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            21100                     00000000            0 0011345789999999999999999999997

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.89  E-value=6.1e-22  Score=165.07  Aligned_cols=176  Identities=17%  Similarity=0.201  Sum_probs=128.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ----   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~----   97 (228)
                      ..|+..+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++.+++|+||+++++++....    
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTV---TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECC---CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            558889999999999999998876   78899999874         34668999999999999999999886442    


Q ss_pred             --CCeEEEeeccccCCHHHHhhhC---------------------------Cccc-------------------------
Q psy796           98 --PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-------------------------  123 (228)
Q Consensus        98 --~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-------------------------  123 (228)
                        ..+++|||+ . ++|.+++...                           +||+                         
T Consensus        93 ~~~~~lv~e~~-~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          93 FQDVYLVMELM-D-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             cCcEEEEEecc-C-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence              468999998 6 6777765432                           3333                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC-------------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG-------------  172 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------  172 (228)
                                        .....++.++||||||+++++|++  |..||...+.......+......             
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR--GTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV  248 (353)
T ss_pred             CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence                              223457788999999999999999  56888776654433332211000             


Q ss_pred             -----CCcc----------ccCCC-------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 -----GELQ----------VFLPK-------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 -----~~~~----------~~~~~-------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                           ....          +....       +...+.++.+++.+||+.||++|||+.+++.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                 0000          00000       12346678999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.89  E-value=8.1e-22  Score=160.91  Aligned_cols=176  Identities=18%  Similarity=0.266  Sum_probs=125.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ----   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~----   97 (228)
                      ++|++.+.||+|+||.||++....   ++..||+|.+.         ..+.+|+.++++++|+||+++++++....    
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKK---TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECC---CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            468889999999999999998865   78899999873         23568999999999999999999886543    


Q ss_pred             ----CCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           98 ----PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        98 ----~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                          ..+++|||+ . ++|.+++...                              ++++                    
T Consensus        89 ~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          89 RYKGSFYLVFEFC-E-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             CCCceEEEEEcCC-C-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence                349999998 6 5777766432                              1222                    


Q ss_pred             ----------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 ----------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ----------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                  . ....++.++||||||++++||++  +..||.+.+.......+........
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t--~~~~~~~~~~~~~~~~~~~~~~~~~  244 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT--RSPIMQGNTEQHQLTLISQLCGSIT  244 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCC
Confidence                                        0 11125678999999999999999  5688877665544333332211000


Q ss_pred             cc--c---------cCCC-------------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQ--V---------FLPK-------------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~--~---------~~~~-------------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..  +         ....             +...+..+.+++.+||+.+|.+|||+.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            00  0         0000             11235678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.89  E-value=2e-22  Score=159.51  Aligned_cols=160  Identities=24%  Similarity=0.385  Sum_probs=128.5

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccc
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ||+|+||.||++....   .+..+++|.+.          ..+.+|+.++++++|+|++++++.+......+++|||+ +
T Consensus         1 lg~G~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~-~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKD---TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA-P   76 (250)
T ss_pred             CCCCCceEEEEEEECC---CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC-C
Confidence            6999999999999865   67899999874          25778999999999999999999998888899999999 8


Q ss_pred             cCCHHHHhhhCCc-----------------------------cc------------------------------------
Q psy796          109 LGDLVQHLNSADN-----------------------------LT------------------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~r~-----------------------------l~------------------------------------  123 (228)
                      +++|.+++.....                             ++                                    
T Consensus        77 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (250)
T cd05123          77 GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGT  156 (250)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCC
Confidence            9999998865411                             11                                    


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD  195 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  195 (228)
                              ......+.++|+||||+++|+|++  +..||...+.......+...        ....+...+.++.+++.+
T Consensus       157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~i~~  226 (250)
T cd05123         157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT--GKPPFYAEDRKEIYEKILKD--------PLRFPEFLSPEARDLISG  226 (250)
T ss_pred             ccccChHHhCCCCCCchhhHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHHHHH
Confidence                    112234678999999999999999  67899777665544444321        445667778999999999


Q ss_pred             hhccCCCCCCCH---HHHHH
Q psy796          196 CWKRDQTMRPTF---KQIYS  212 (228)
Q Consensus       196 c~~~~p~~Rps~---~~v~~  212 (228)
                      ||..+|++||++   .+++.
T Consensus       227 ~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         227 LLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HhcCCHhhCCCcccHHHHHh
Confidence            999999999999   55543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=3.3e-22  Score=165.63  Aligned_cols=179  Identities=20%  Similarity=0.257  Sum_probs=130.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----C
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE-----Q   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----~   97 (228)
                      .|.+.+.||+|+||.||++....   .+..|++|.++         ..+.+|+.++..++|+||+++++++...     .
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSE---TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecC---CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            47888999999999999998765   78899999874         3456799999999999999999987644     2


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++++||+ . ++|.+++...                             ++|+                         
T Consensus        83 ~~~lv~e~~-~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          83 DVYIVYELM-D-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             cEEEEEeCC-C-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            479999998 6 7888777543                             2222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC----------
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG----------  173 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------  173 (228)
                                          .....++.++||||||+++|+|++  |..||.+.+.......+.......          
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T cd07858         161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLG--RKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN  238 (337)
T ss_pred             CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence                                111346789999999999999999  568887665433322222111000          


Q ss_pred             ----------CccccC---CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 ----------ELQVFL---PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ----------~~~~~~---~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                ......   .....++.++.+++.+||+.+|++|||+.+++++  ++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                      000000   0123578899999999999999999999999987  6665

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-22  Score=161.13  Aligned_cols=174  Identities=21%  Similarity=0.302  Sum_probs=129.1

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |++.+.||+|++|.||++....   ++..+++|.++         ..+.+|++++++++|+|++++++++...+..++++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKL---TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCC---CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence            3566789999999999998865   67889999874         34678999999999999999999998888999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ + ++|.+++...                              ++|+                              
T Consensus        78 e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~  155 (283)
T cd05118          78 EFM-D-TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY  155 (283)
T ss_pred             ecc-C-CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence            998 7 5888777542                              1111                              


Q ss_pred             --------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc--ccc--------
Q psy796          124 --------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL--QVF--------  178 (228)
Q Consensus       124 --------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~--------  178 (228)
                                    .. ...++.++|+||||+++++|++  |..||...+..+....+.........  ...        
T Consensus       156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd05118         156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLS--RRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY  233 (283)
T ss_pred             cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence                          11 1256788999999999999999  56888776665443333221110000  000        


Q ss_pred             ---C---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 ---L---------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ---~---------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         .         .....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence               0         0123467899999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0584|consensus

Probab=99.89  E-value=3.1e-23  Score=175.44  Aligned_cols=167  Identities=16%  Similarity=0.272  Sum_probs=135.2

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC--C
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP--P   99 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~--~   99 (228)
                      +++..+||+|.|-+||+|....   .+..||.=.++           +.|..|+++|+.|+|+||++++..+.+..+  +
T Consensus        42 ~k~~evLGrGafKtVYka~De~---~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i  118 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEE---EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI  118 (632)
T ss_pred             eehhhhcccccceeeeeccccc---cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence            4567899999999999998854   66677654442           568899999999999999999999987654  7


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      -+|+|.+ +.|+|..|++++                               |||+                         
T Consensus       119 n~iTEL~-TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  119 NFITELF-TSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             eeeeecc-cCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence            8999999 999999999877                               3444                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                       .-...|+..+|||||||+++||.|  +.-||.... +.++..++..+.+..      .....-
T Consensus       198 ~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT--~eYPYsEC~n~AQIYKKV~SGiKP~------sl~kV~  269 (632)
T KOG0584|consen  198 KSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVT--SEYPYSECTNPAQIYKKVTSGIKPA------ALSKVK  269 (632)
T ss_pred             ccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHh--ccCChhhhCCHHHHHHHHHcCCCHH------HhhccC
Confidence                             334679999999999999999999  679998865 557888887664211      011223


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .++++.||.+|+.. ..+|||+.+++.
T Consensus       270 dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  270 DPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            67999999999999 999999999996

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.89  E-value=6.8e-22  Score=160.19  Aligned_cols=175  Identities=17%  Similarity=0.255  Sum_probs=129.2

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~   99 (228)
                      +|++.+.||+|+||.||.+........+..||+|.++           +.+.+|+.++..+ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4678899999999999999875433367889999884           3467799999999 599999999999888888


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------c--
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------R--  124 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------~--  124 (228)
                      ++++||+ ++++|.+++...                             ++|+                        .  
T Consensus        81 ~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  159 (290)
T cd05613          81 HLILDYI-NGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE  159 (290)
T ss_pred             EEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence            9999999 999999988654                             2222                        0  


Q ss_pred             ---------------------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          125 ---------------------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       125 ---------------------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                           ....++.++||||||+++|+|++  |..||...........+.......    ..+.+.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~  233 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLT--GASPFTVDGEKNSQAEISRRILKS----EPPYPQ  233 (290)
T ss_pred             ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhc--CCCCCCcCCccccHHHHHHHhhcc----CCCCCc
Confidence                                 01234678999999999999999  668886433222212221111111    223456


Q ss_pred             CCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      .++..+.+++.+||+.+|.+||     ++.+++.+
T Consensus       234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            6888999999999999999997     67777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.89  E-value=9.1e-22  Score=158.82  Aligned_cols=174  Identities=21%  Similarity=0.291  Sum_probs=126.4

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC---CCCCcceeeeeeeCCCC--
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL---QDPNLVSILGVCTGEQP--   98 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l---~h~niv~~~g~~~~~~~--   98 (228)
                      |++.+.||+|+||.||+|....   .+..||+|.++         ..+.+|+.++.++   +|+|++++++++.....  
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence            4678899999999999999875   67899999985         2356787777655   69999999999987766  


Q ss_pred             ---CeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           99 ---PWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        99 ---~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                         .+++|||+ + ++|.+++...                               ++++                     
T Consensus        78 ~~~~~l~~e~~-~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          78 ELKLTLVFEHV-D-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             CceeEEEehhc-c-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence               89999998 6 6888877542                               1111                     


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------  175 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------  175 (228)
                                            .....++.++||||||++++||++  +.+||.+.+..+....+.........      
T Consensus       156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07838         156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFR--RRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN  233 (287)
T ss_pred             eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHh--CCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence                                  122345778999999999999999  56888877766555444332111000      


Q ss_pred             --------cccCCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 --------QVFLPK-----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 --------~~~~~~-----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                              ......     ....+..+.+++.+||+.+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                    000000     11245678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.89  E-value=5.1e-22  Score=164.28  Aligned_cols=178  Identities=17%  Similarity=0.228  Sum_probs=131.8

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---------------------HHHHHHHHHhhCCCCCcc
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---------------------DSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---------------------~~~~e~~~l~~l~h~niv   87 (228)
                      ..+-+.+.+.||+|+||.||++....   .++.||+|.++.                     .+.+|++++..++|+||+
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   83 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTL---TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIM   83 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECC---CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCccee
Confidence            33434456789999999999998765   678999998741                     367899999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------  123 (228)
                      ++++++...+..+++|||+ . |+|.+++...                             +||+               
T Consensus        84 ~~~~~~~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         84 GLVDVYVEGDFINLVMDIM-A-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             eeeEEEecCCcEEEEEecc-c-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence            9999999888999999998 7 7898887543                             1121               


Q ss_pred             -------cc-------------------------------------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 -------RD-------------------------------------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 -------~~-------------------------------------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                             ..                                     ...++.++||||||++++||++  |..||.+.+.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~  239 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT--GKPLFPGENE  239 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCH
Confidence                   00                                     1235778999999999999999  6689987776


Q ss_pred             HHHHHHHHHhhhCCCcc---------------ccCC-----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          160 EQVIQNAEHMYYGGELQ---------------VFLP-----KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~---------------~~~~-----~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+....+..........               ...+     ....++.++.+++.+||+.+|++||++.+++.+
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            65554443322111000               0000     013457889999999999999999999999863

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.89  E-value=1.1e-21  Score=158.96  Aligned_cols=176  Identities=18%  Similarity=0.221  Sum_probs=125.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .+|.+.+.||+|+||.||+|....   .+..|++|.+.        ..+.+|++++..++|+||+++++++......+++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRI---NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcC---CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence            457889999999999999998865   67899999884        2467899999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      +||+ . +++.+++...                              +||+                             
T Consensus        82 ~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          82 FEYM-H-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT  159 (291)
T ss_pred             Eecc-c-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence            9998 7 6776665321                              2222                             


Q ss_pred             ---------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhC------------CC
Q psy796          124 ---------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYG------------GE  174 (228)
Q Consensus       124 ---------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~------------~~  174 (228)
                                     .. ...++.++||||||+++|||++  |..||...+.. +....+......            ..
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQ--GQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN  237 (291)
T ss_pred             CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence                           00 1235678999999999999999  56888765432 222222111000            00


Q ss_pred             c-cccC--CCC---------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 L-QVFL--PKP---------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~-~~~~--~~~---------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      . ....  ..+         ...+.++.+++.+|++.+|.+|||+.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            0 0000  000         0125678999999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.89  E-value=3.9e-22  Score=165.59  Aligned_cols=175  Identities=19%  Similarity=0.210  Sum_probs=126.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCC-------
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGE-------   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~-------   96 (228)
                      .+|.+.+.||.|+||.||+|....   .+..|++|.+.       ..+.+|++++++++|+||+++++++...       
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~---~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSD---CDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECC---CCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            568899999999999999998765   67899999883       4578899999999999999999876543       


Q ss_pred             -------CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           97 -------QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        97 -------~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                             ...+++|||+ + ++|.+++...                            ++++                  
T Consensus        82 ~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          82 VGSLTELNSVYIVQEYM-E-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             cccccccceEEEEeecc-c-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence                   2468999998 7 6887776432                            2222                  


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     .....++.++|||||||++|||++  +..||...+..............
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~--g~~pf~~~~~~~~~~~~~~~~~~  237 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT--GKPLFAGAHELEQMQLILESVPV  237 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCC
Confidence                                           011245678999999999999999  56888766544332222111000


Q ss_pred             -------------------CCccccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          173 -------------------GELQVFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       173 -------------------~~~~~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                                         .......+   .....+.++.+++.+||+.+|.+|||+.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence                               00000000   12346788999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.89  E-value=4.4e-22  Score=164.68  Aligned_cols=176  Identities=20%  Similarity=0.295  Sum_probs=129.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC----C
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE----Q   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~----~   97 (228)
                      ++|++.+.||+|+||.||++....   .+..|++|.+.         ..+.+|+.++..++|+||+++++++...    .
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTR---SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcC---CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence            568889999999999999998875   68899999874         3467899999999999999999887532    3


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ . ++|.+++...                             ++++                         
T Consensus        82 ~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  159 (334)
T cd07855          82 DVYVVMDLM-E-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS  159 (334)
T ss_pred             eEEEEEehh-h-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence            579999998 6 6888877543                             2222                         


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------  173 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------  173 (228)
                                              .....++.++||||||+++|||++  |..||.+.+.......+.......      
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~--g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG--RRQLFPGKNYVHQLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc--CCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence                                    011246788999999999999999  678998766543333222211000      


Q ss_pred             ------------CccccCCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ------------ELQVFLPK-----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ------------~~~~~~~~-----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                  ........     ....+.++.+++.+||+.+|.+||++.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                        00000001     13467899999999999999999999999873

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.89  E-value=1.1e-21  Score=162.03  Aligned_cols=176  Identities=18%  Similarity=0.214  Sum_probs=129.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC-CCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG-EQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~  100 (228)
                      .+|++.+.||.|+||.||++....   .+..||+|.+.         ..+.+|++++..++|||++++++++.. .+..+
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQL---TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECC---CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            458899999999999999998765   78899999762         457789999999999999999999865 45789


Q ss_pred             EEEeeccccCCHHHHhhhC----------------------------Cccc-----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------------------  123 (228)
                      +++||+ . ++|.++++..                            ++++                             
T Consensus        87 lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  164 (328)
T cd07856          87 FVTELL-G-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG  164 (328)
T ss_pred             EEeehh-c-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCC
Confidence            999997 5 6887776542                            1111                             


Q ss_pred             ------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC------------------
Q psy796          124 ------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG------------------  172 (228)
Q Consensus       124 ------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~------------------  172 (228)
                                  .. ...++.++||||||+++++|++  |..||...........+......                  
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~t--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLE--GKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV  242 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence                        11 1356788999999999999999  56888776653322222211100                  


Q ss_pred             --CCccccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 --GELQVFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 --~~~~~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                        .......+   ....++.++.+++.+||+.+|++||++.+++.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence              00000001   113467899999999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.89  E-value=4.7e-22  Score=159.58  Aligned_cols=170  Identities=16%  Similarity=0.289  Sum_probs=123.3

Q ss_pred             ceeeee--ecccceeeEEEEEEeccCCCceeEEeecchHHHHH--HHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           33 LRVLER--LGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR--EIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        33 ~~~~~~--ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~~~~--e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      +++.+.  ||+|+||.||++....   .+..+++|.+.....+  |+.....+ +|+|++++++.+...+..+++|||+ 
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~-   91 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKP---TQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI-   91 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcC---CCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC-
Confidence            444444  5999999999998765   6788999998643222  33332222 7999999999999988999999999 


Q ss_pred             ccCCHHHHhhhCC-----------------------------ccc-----------------------------------
Q psy796          108 QLGDLVQHLNSAD-----------------------------NLT-----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~r-----------------------------~l~-----------------------------------  123 (228)
                      ++++|.+++....                             |++                                   
T Consensus        92 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  171 (267)
T PHA03390         92 KDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLD  171 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCc
Confidence            9999999987651                             111                                   


Q ss_pred             ------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHh
Q psy796          124 ------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDC  196 (228)
Q Consensus       124 ------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  196 (228)
                            .....++.++||||||++++||++  |..||......... ..+.... .    .....+..++..+.+++.+|
T Consensus       172 y~aPE~~~~~~~~~~~DvwslG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~li~~~  244 (267)
T PHA03390        172 YFSPEKIKGHNYDVSFDWWAVGVLTYELLT--GKHPFKEDEDEELDLESLLKRQ-Q----KKLPFIKNVSKNANDFVQSM  244 (267)
T ss_pred             ccChhhhcCCCCCchhhHHHHHHHHHHHHH--CCCCCCCCCcchhhHHHHHHhh-c----ccCCcccccCHHHHHHHHHH
Confidence                  223456788999999999999999  56888755433221 1111111 1    12334557889999999999


Q ss_pred             hccCCCCCCC-HHHHHHH
Q psy796          197 WKRDQTMRPT-FKQIYSF  213 (228)
Q Consensus       197 ~~~~p~~Rps-~~~v~~~  213 (228)
                      |+.+|.+||+ +++++++
T Consensus       245 l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        245 LKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             hccChhhCCchHHHHhcC
Confidence            9999999996 6888753

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.88  E-value=5.7e-22  Score=164.17  Aligned_cols=180  Identities=23%  Similarity=0.300  Sum_probs=129.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCCC--C
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGEQ--P   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~--~   98 (228)
                      ++|++.+.||+|+||.||+|....   .+..+++|.+.         ..+.+|+.++.++ +|+||+++++++...+  .
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRR---TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcC---CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            357788899999999999998865   67889999773         3367899999999 9999999999886543  5


Q ss_pred             CeEEEeeccccCCHHHHhhhC----------------------------Cccc---------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA----------------------------DNLT---------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~---------------------------  123 (228)
                      .+++|||+ + ++|.+++...                            ++|+                           
T Consensus        84 ~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          84 IYLVFEYM-E-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             EEEEeccc-c-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            79999998 7 6888876542                            2222                           


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh---------
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY---------  171 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~---------  171 (228)
                                             .....++.++||||||+++|||++  |..||.+....+....+.....         
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL--GKPLFPGTSTLNQLEKIIEVIGPPSAEDIES  239 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence                                   011235678999999999999999  5688876654433322222110         


Q ss_pred             --------------CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          172 --------------GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       172 --------------~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                    .............++.++.+++.+||+.+|++|||+.+++++  ++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                          000000011123368899999999999999999999999975  5554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.88  E-value=8e-22  Score=159.00  Aligned_cols=174  Identities=22%  Similarity=0.390  Sum_probs=125.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecchH--------HHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG--------DSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~--------~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |.+.+.||+|+||.||+|....   .+..|++|.+..        ...+|+..+.+++ |+|++++++++..++..+++|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   77 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE---TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF   77 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC---CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence            4567889999999999999865   678899998742        2356889999998 999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC-------------------------------Cccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------------  123 (228)
                      ||+ . |+|.+++...                               ++|+                             
T Consensus        78 e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (283)
T cd07830          78 EYM-E-GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY  155 (283)
T ss_pred             ecC-C-CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence            998 5 7888877543                               1111                             


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-------------Cc
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-------------EL  175 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------~~  175 (228)
                                     .....++.++|+||||++++||++  +..||...+..+....+.......             ..
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd07830         156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT--LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL  233 (283)
T ss_pred             CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh--CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence                           112335788999999999999999  568887665443332222110000             00


Q ss_pred             cccCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+         .....+.++.+++.+||+.+|++|||+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            00000         011236789999999999999999999999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.88  E-value=1.1e-21  Score=158.51  Aligned_cols=165  Identities=19%  Similarity=0.274  Sum_probs=120.5

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHh---hCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLS---SLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~---~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      .||+|+||.||++....   .++.+|+|.+..          ...+|..++.   ..+|+|++.+++.+...+..+++||
T Consensus         1 ~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEECC---CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence            48999999999998765   678999998731          1234443333   3479999999999988888999999


Q ss_pred             eccccCCHHHHhhhC-----------------------------Cccc--------------------------------
Q psy796          105 YPAQLGDLVQHLNSA-----------------------------DNLT--------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------------  123 (228)
                      |+ ++|+|.+++...                             +|++                                
T Consensus        78 ~~-~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (279)
T cd05633          78 LM-NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV  156 (279)
T ss_pred             cC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcC
Confidence            99 999999887643                             2222                                


Q ss_pred             ----------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 ----------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 ----------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                . .+..++.++||||||++++||++  |..||......... .+......    .....+..++.++.++
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~l  229 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLR--GHSPFRQHKTKDKH-EIDRMTLT----VNVELPDSFSPELKSL  229 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHh--CCCCcCCCCCcCHH-HHHHHhhc----CCcCCccccCHHHHHH
Confidence                      1 13346788999999999999999  66888754332111 11111110    0223456688999999


Q ss_pred             HHHhhccCCCCCC-----CHHHHHHH
Q psy796          193 MCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      +.+||..+|.+||     |+.+++++
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         230 LEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            9999999999999     59998875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.88  E-value=4.6e-22  Score=162.97  Aligned_cols=170  Identities=16%  Similarity=0.222  Sum_probs=119.0

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      ++.+|.|+++.|+++..     .+..||+|.++         ..+.+|+++++.++|+||+++++++..++..+++|||+
T Consensus         7 ~~~~~~~~~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~   81 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-----TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLM   81 (314)
T ss_pred             hHhhcCCceEEEEEecC-----CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEecc
Confidence            34444555555555443     67899999873         45789999999999999999999999988999999999


Q ss_pred             cccCCHHHHhhhC-------------------------------Cccc--------------------------------
Q psy796          107 AQLGDLVQHLNSA-------------------------------DNLT--------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-------------------------------r~l~--------------------------------  123 (228)
                       ++|+|.+++...                               +||+                                
T Consensus        82 -~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (314)
T cd08216          82 -AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV  160 (314)
T ss_pred             -CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence             999999988642                               2222                                


Q ss_pred             -------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhhhC----CC---
Q psy796          124 -------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYG----GE---  174 (228)
Q Consensus       124 -------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~----~~---  174 (228)
                                         ..  ...++.++||||||+++|||++  |..||......... ..+......    ..   
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (314)
T cd08216         161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN--GHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL  238 (314)
T ss_pred             cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence                               00  1246788999999999999999  67899876544322 211110000    00   


Q ss_pred             ----c--------------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 ----L--------------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ----~--------------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                          .              ......+...+.++.+++.+||+.+|++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence                0              00000011234678899999999999999999999973

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG3653|consensus

Probab=99.88  E-value=1.5e-22  Score=166.29  Aligned_cols=189  Identities=21%  Similarity=0.321  Sum_probs=135.0

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhh--CCCCCcceeeeeeeCCC---
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSS--LQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~--l~h~niv~~~g~~~~~~---   97 (228)
                      ......+.+.++||+|.||.||+|.+     +++.||||++.    ..|++|-+++..  +.|+||++|+++.....   
T Consensus       206 l~~l~pl~l~eli~~Grfg~V~KaqL-----~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  206 LLELDPLQLLELIGRGRFGCVWKAQL-----DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR  280 (534)
T ss_pred             cccCCchhhHHHhhcCccceeehhhc-----cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence            33456678889999999999999999     67999999994    668888888775  48999999999876544   


Q ss_pred             -CCeEEEeeccccCCHHHHhhhC-------------------------------------Cccc----------------
Q psy796           98 -PPWLVMEYPAQLGDLVQHLNSA-------------------------------------DNLT----------------  123 (228)
Q Consensus        98 -~~~lv~e~~~~~g~L~~~l~~~-------------------------------------r~l~----------------  123 (228)
                       ..+||++|. ++|+|.+||..+                                     |||+                
T Consensus       281 ~eywLVt~fh-~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  281 MEYWLVTEFH-PKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             cceeEEeeec-cCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence             578999999 999999999887                                     5555                


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC----------CCCC-
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK----------PFPH-  156 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~----------p~~~-  156 (228)
                                                          +.....-.+.||||+|.++|||++++...          ||.. 
T Consensus       360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e  439 (534)
T KOG3653|consen  360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE  439 (534)
T ss_pred             cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence                                                11112225699999999999999965311          2320 


Q ss_pred             CChHHHHHHHHHhhhCCCccccCCC-C--CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          157 LTNEQVIQNAEHMYYGGELQVFLPK-P--SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                      ....-....++...-..+.++.++. .  ..-..-+++.+..||-.|++.|.|+.-+.+++.++....
T Consensus       440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            0000112222222222333333332 1  112356889999999999999999999999999984433

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.8e-21  Score=161.60  Aligned_cols=185  Identities=21%  Similarity=0.254  Sum_probs=131.7

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .|++. .+|...+.||+|+||.||+|....   .+..||+|.++         ..+.+|++++..++|+||+++++++..
T Consensus        10 ~~~~~-~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~   85 (342)
T cd07879          10 VWELP-ERYTSLKQVGSGAYGSVCSAIDKR---TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTS   85 (342)
T ss_pred             hhccc-cceEEEEEeeecCCeEEEEEEeCC---CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecc
Confidence            35554 468889999999999999998754   67899999874         346789999999999999999999865


Q ss_pred             CC------CCeEEEeeccccCCHHHHhhhC---------------------------Cccc-------------------
Q psy796           96 EQ------PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-------------------  123 (228)
Q Consensus        96 ~~------~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-------------------  123 (228)
                      ..      ..++++||+ . .+|..++...                           ++|+                   
T Consensus        86 ~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~  163 (342)
T cd07879          86 AVSGDEFQDFYLVMPYM-Q-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGL  163 (342)
T ss_pred             cccCCCCceEEEEeccc-c-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence            43      348999998 5 4666543311                           2222                   


Q ss_pred             ----------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC------
Q psy796          124 ----------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE------  174 (228)
Q Consensus       124 ----------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------  174 (228)
                                            . ....++.++||||||+++|||++  |..||.+.+.......+........      
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07879         164 ARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLT--GKTLFKGKDYLDQLTQILKVTGVPGPEFVQK  241 (342)
T ss_pred             CcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence                                  1 12346788999999999999999  6689987665443333222110000      


Q ss_pred             -----------ccccCCC------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          175 -----------LQVFLPK------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       175 -----------~~~~~~~------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                 ..+..+.      .+..+.++.+++.+||+.+|.+||++.+++.+  ++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence                       0000000      12467789999999999999999999999965  6666

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0690|consensus

Probab=99.88  E-value=1.1e-22  Score=160.89  Aligned_cols=166  Identities=21%  Similarity=0.339  Sum_probs=144.1

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHHH----------HHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~~----------~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      -.+..++|.+.++||+|.||+|-+++-+.   .++.+|+|+++++.          ..|-++|++.+||.+..+.-.|+.
T Consensus       163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKa---t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt  239 (516)
T KOG0690|consen  163 NKVTMEDFDFLKVLGKGTFGKVILCREKA---TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT  239 (516)
T ss_pred             ceeccchhhHHHHhcCCccceEEEEeecc---cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence            34566788999999999999999999877   88999999997553          457788899999999999888888


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      +..+++||||. .||.|+-+|.+.                             |||+                       
T Consensus       240 ~drlCFVMeya-nGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  240 QDRLCFVMEYA-NGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             CceEEEEEEEc-cCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            88999999999 999998888765                             3443                       


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           +..+.|..++|.|++||++|||++  |..||...+...+...+...        .+.+|
T Consensus       319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmC--GRLPFyn~dh~kLFeLIl~e--------d~kFP  388 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMC--GRLPFYNKDHEKLFELILME--------DLKFP  388 (516)
T ss_pred             ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHh--ccCcccccchhHHHHHHHhh--------hccCC
Confidence                                 677889999999999999999999  67999999999888887654        45678


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCC
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rp  205 (228)
                      ..++++.++|+...+..||.+|.
T Consensus       389 r~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  389 RTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             ccCCHHHHHHHHHHhhcChHhhc
Confidence            99999999999999999999995

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.1e-21  Score=162.82  Aligned_cols=181  Identities=19%  Similarity=0.232  Sum_probs=131.6

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+++. ++|+..+.||+|+||.||+|....   .+..||+|.+.         ..+.+|+.+++++.|+|++++++++..
T Consensus        10 ~~~~~-~~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   85 (343)
T cd07851          10 VWEVP-DRYQNLSPVGSGAYGQVCSAFDTK---TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTP   85 (343)
T ss_pred             eeccc-CceEEEEEeccCCceEEEEEEECC---CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhc
Confidence            34444 458999999999999999999875   67899999874         335689999999999999999988765


Q ss_pred             CCC------CeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           96 EQP------PWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        96 ~~~------~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                      .+.      .++++||+ . ++|.+++...                            ++++                  
T Consensus        86 ~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          86 ASSLEDFQDVYLVTHLM-G-ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             cccccccccEEEEEecC-C-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccc
Confidence            544      79999997 4 7898876543                            2222                  


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC-----
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE-----  174 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----  174 (228)
                                              .....++.++||||||++++||++  |..||.+.+..+....+........     
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ellt--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  241 (343)
T cd07851         164 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT--GKTLFPGSDHIDQLKRIMNLVGTPDEELLQ  241 (343)
T ss_pred             ccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence                                    011246788999999999999999  5688877666544443332211000     


Q ss_pred             ---------------ccccC---CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 ---------------LQVFL---PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ---------------~~~~~---~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                     .....   ......+.++.+++.+||+.+|.+|||+.+|+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence                           00000   0012357899999999999999999999999863

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.88  E-value=1.7e-21  Score=159.14  Aligned_cols=177  Identities=19%  Similarity=0.264  Sum_probs=127.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|++.+.||+|+||.||++....   ++..+++|.+.         ..+.+|++++++++|+||+++++++....   
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIK---TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS   83 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence            3678999999999999999999865   67889999873         34678999999999999999998875433   


Q ss_pred             -----CCeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------
Q psy796           98 -----PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------  123 (228)
Q Consensus        98 -----~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------  123 (228)
                           ..++++||+ . +++...+...                              ++++                   
T Consensus        84 ~~~~~~~~lv~~~~-~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          84 KRKRGSVYMVTPYM-D-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             cccCceEEEEEecC-C-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence                 358999998 6 5666655432                              2222                   


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .....++.++||||||++++||++  |.+||.+.+.......+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~--g~~~~~~~~~~~~~~~~  239 (311)
T cd07866         162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFT--RRPILQGKSDIDQLHLI  239 (311)
T ss_pred             chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHH
Confidence                                                 001235778999999999999999  66888877765544443


Q ss_pred             HHhhhCCCcc---------------ccCCC-------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMYYGGELQ---------------VFLPK-------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~~~~~~~---------------~~~~~-------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..........               .....       ....+.++.+++.+||+.+|.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            3321110000               00000       02344678999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0599|consensus

Probab=99.88  E-value=6.6e-23  Score=158.57  Aligned_cols=171  Identities=20%  Similarity=0.271  Sum_probs=143.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhC-CCCCcceeeeeeeCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSL-QDPNLVSILGVCTGE   96 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l-~h~niv~~~g~~~~~   96 (228)
                      ++-.+.+|.|..+.|.++.++.   .+...|+|++.               +.-.+|+.+|+++ .||||+.+.++++.+
T Consensus        19 y~pkeilgrgvss~vrRci~k~---t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKE---TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             cChHHHhcccchhhhhhhhhcc---cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            4556789999999999888876   78889999883               3346799999998 699999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +.+++|+|.+ +.|.|+|||...                             |||+                        
T Consensus        96 sF~FlVFdl~-prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   96 AFVFLVFDLM-PRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             chhhhhhhhc-ccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence            9999999999 999999999865                             4555                        


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....|+..+|+|+.||++|-|+.|  -+||-+..-.-.+..++.+..+-    .
T Consensus       175 ~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG--cpPFwHRkQmlMLR~ImeGkyqF----~  248 (411)
T KOG0599|consen  175 PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG--CPPFWHRKQMLMLRMIMEGKYQF----R  248 (411)
T ss_pred             CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC--CCchhHHHHHHHHHHHHhccccc----C
Confidence                                     3445789999999999999999995  58888776666677777765443    4


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+.+..++.+.++|+.+|++.||.+|-|+.++++|
T Consensus       249 speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  249 SPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             CcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            55678889999999999999999999999999973

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.88  E-value=1.8e-21  Score=159.63  Aligned_cols=77  Identities=23%  Similarity=0.462  Sum_probs=62.3

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeC--CCCCeEEEeecccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTG--EQPPWLVMEYPAQL  109 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~~lv~e~~~~~  109 (228)
                      ..||+|+||.||+|..... ..+..||+|.+.     ..+.+|+.+++.++|+||+++++++..  +...++++||+ . 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~-~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~-   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDG-KDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA-E-   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCC-CccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee-C-
Confidence            5799999999999987531 145789999885     357899999999999999999998854  34678999998 6 


Q ss_pred             CCHHHHh
Q psy796          110 GDLVQHL  116 (228)
Q Consensus       110 g~L~~~l  116 (228)
                      ++|.+++
T Consensus        84 ~~l~~~~   90 (317)
T cd07867          84 HDLWHII   90 (317)
T ss_pred             CcHHHHH
Confidence            5666655

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.88  E-value=1.9e-21  Score=159.59  Aligned_cols=78  Identities=24%  Similarity=0.427  Sum_probs=62.7

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCC--CCCeEEEeeccc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGE--QPPWLVMEYPAQ  108 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~lv~e~~~~  108 (228)
                      ++.||+|+||.||+|..... ..+..||+|.++     ..+.+|+.+++.++|+||+++++++...  ...+++|||+ .
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG-KDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-E   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccC-CCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-C
Confidence            35799999999999986531 146789999885     4578999999999999999999988653  3578999997 5


Q ss_pred             cCCHHHHh
Q psy796          109 LGDLVQHL  116 (228)
Q Consensus       109 ~g~L~~~l  116 (228)
                       ++|.+++
T Consensus        84 -~~l~~~~   90 (317)
T cd07868          84 -HDLWHII   90 (317)
T ss_pred             -CCHHHHH
Confidence             5776655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.8e-21  Score=160.62  Aligned_cols=179  Identities=20%  Similarity=0.248  Sum_probs=134.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----   97 (228)
                      +|.+.+.||+|+||.||++....   .+..|++|.+.         ..+.+|+.+++.++|+||+++++++....     
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR---TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN   77 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC---CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence            46788999999999999999764   67899999874         35788999999999999999999987764     


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ + ++|.+++...                             ++|+                         
T Consensus        78 ~~~lv~e~~-~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~  155 (330)
T cd07834          78 DVYIVTELM-E-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP  155 (330)
T ss_pred             ceEEEecch-h-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence            679999998 7 6888877553                             2222                         


Q ss_pred             ----------------------cccC-CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc----
Q psy796          124 ----------------------RDRD-RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ----  176 (228)
Q Consensus       124 ----------------------~~~~-~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----  176 (228)
                                            ..+. .++.++|+||||+++++|++  |..||.+.+..+....+..........    
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  233 (330)
T cd07834         156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT--RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF  233 (330)
T ss_pred             cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHc--CCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence                                  0112 56778999999999999999  678998877655444443321100000    


Q ss_pred             ----------------cc---CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          177 ----------------VF---LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       177 ----------------~~---~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                      ..   .......+.++.+++.+||+.+|.+||++.+++.+  |+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence                            00   00123367889999999999999999999999985  6666

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=2.2e-21  Score=168.56  Aligned_cols=180  Identities=17%  Similarity=0.260  Sum_probs=118.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCC----------------ceeEEeecc------hHHHHHHHHHHhhCCCCCcce
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELD----------------TEKVAVRTC------RGDSLREIRFLSSLQDPNLVS   88 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~----------------~~~vavK~~------~~~~~~e~~~l~~l~h~niv~   88 (228)
                      +.|++++.||+|+||.||++..+.....                ...++.|.+      ...+.+|+.++..++|+||++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            4688999999999999999876532100                011112222      144789999999999999999


Q ss_pred             eeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc-----------
Q psy796           89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT-----------  123 (228)
Q Consensus        89 ~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~-----------  123 (228)
                      +++++...+..+++++++ . ++|.+++...                                  |||+           
T Consensus       228 l~~~~~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~  305 (501)
T PHA03210        228 IEEILRSEANTYMITQKY-D-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK  305 (501)
T ss_pred             EeEEEEECCeeEEEEecc-c-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence            999999888899999987 5 5666654321                                  3444           


Q ss_pred             ----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh---HHHHHHH
Q psy796          124 ----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN---EQVIQNA  166 (228)
Q Consensus       124 ----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~---~~~~~~~  166 (228)
                                                        ..+..++.++|||||||++|||++++ ..|+.....   .++...+
T Consensus       306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~-~~p~~~~~~~~~~~~~~~~  384 (501)
T PHA03210        306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHD-FCPIGDGGGKPGKQLLKII  384 (501)
T ss_pred             EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCC-CCCccCCCCCHHHHHHHHH
Confidence                                              22345678899999999999999963 455543321   1121111


Q ss_pred             HHhh-----------------hCCCcc---ccC---CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMY-----------------YGGELQ---VFL---PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~-----------------~~~~~~---~~~---~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....                 ......   ...   .....++.++.+++.+|++.||.+|||+.+++.+
T Consensus       385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            1000                 000000   000   0012356678889999999999999999999874

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.87  E-value=5.4e-21  Score=155.50  Aligned_cols=186  Identities=9%  Similarity=0.111  Sum_probs=120.0

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHH---------------HHHHHHHhhCCCCC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDS---------------LREIRFLSSLQDPN   85 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~---------------~~e~~~l~~l~h~n   85 (228)
                      ...++....|.+.+.||+|+||.||+|...........+++|...   ..+               ..+...+..+.|+|
T Consensus         5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~   84 (294)
T PHA02882          5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG   84 (294)
T ss_pred             eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence            344566778999999999999999999986421114566777542   111               11223345568999


Q ss_pred             cceeeeeeeCCC----CCeEEEeeccccCCHHHHhh-------------------------hC----Cccc---------
Q psy796           86 LVSILGVCTGEQ----PPWLVMEYPAQLGDLVQHLN-------------------------SA----DNLT---------  123 (228)
Q Consensus        86 iv~~~g~~~~~~----~~~lv~e~~~~~g~L~~~l~-------------------------~~----r~l~---------  123 (228)
                      +++++++.....    ..+++++++ . .++.+.+.                         ..    |||+         
T Consensus        85 i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~  162 (294)
T PHA02882         85 IPKYYGCGSFKRCRMYYRFILLEKL-V-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN  162 (294)
T ss_pred             CCcEEEeeeEecCCceEEEEEEehh-c-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            999998765443    236777765 3 34433332                         11    4444         


Q ss_pred             ------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-H
Q psy796          124 ------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-E  160 (228)
Q Consensus       124 ------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~  160 (228)
                                                                ..+..++.++||||||++++||++  |..||.+.+. .
T Consensus       163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~--g~~P~~~~~~~~  240 (294)
T PHA02882        163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAG--IKLPWKGFGHNG  240 (294)
T ss_pred             CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCccccch
Confidence                                                      122346788999999999999999  6799987743 2


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ............ ...........++.++.+++..||+.+|++||++.++.+.|
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        241 NLIHAAKCDFIK-RLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHhHHHHHH-HhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            222211110000 00001112446789999999999999999999999999876

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.87  E-value=5.9e-21  Score=158.72  Aligned_cols=177  Identities=19%  Similarity=0.190  Sum_probs=126.2

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC----
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE----   96 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~----   96 (228)
                      .++|.+.+.||+|+||.||++....   ++..||+|.++         ..+.+|+.++.+++|+||+++++++...    
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~   92 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE   92 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcC---CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence            3569999999999999999998755   67899999874         3467899999999999999999987543    


Q ss_pred             --CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------------
Q psy796           97 --QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------------  123 (228)
Q Consensus        97 --~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------------  123 (228)
                        ...+++++++  +++|.+++...                            ++++                       
T Consensus        93 ~~~~~~lv~~~~--~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877          93 EFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             ccccEEEEehhc--ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence              2357788875  57887765432                            2222                       


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------  173 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------  173 (228)
                                         .....++.++||||||++++||++  |..||...+.......+.......           
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (345)
T cd07877         171 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT--GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  248 (345)
T ss_pred             cccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccH
Confidence                               011346788999999999999999  568887665544333222211000           


Q ss_pred             ---------CccccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ---------ELQVFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ---------~~~~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               ...+...   .....+.++.+++.+|++.+|.+||++.+++.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         249 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             hHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence                     0000000   012357789999999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.87  E-value=9.5e-21  Score=157.35  Aligned_cols=185  Identities=18%  Similarity=0.231  Sum_probs=131.3

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .|.+. ++|.+.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.+++.++|+||+++++++..
T Consensus        10 ~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   85 (343)
T cd07880          10 IWEVP-DRYRDLKQVGSGAYGTVCSALDRR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTP   85 (343)
T ss_pred             hhccc-cceEEEEEeeecCCeEEEEEEECC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecC
Confidence            34443 448889999999999999998765   68899999873         346789999999999999999999876


Q ss_pred             CCC------CeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           96 EQP------PWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        96 ~~~------~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                      ...      .+++|||+  +++|.+++...                            ++++                  
T Consensus        86 ~~~~~~~~~~~lv~e~~--~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg  163 (343)
T cd07880          86 DLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  163 (343)
T ss_pred             CccccccceEEEEEecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence            542      48999997  47887776532                            2222                  


Q ss_pred             -----------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC------
Q psy796          124 -----------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG------  173 (228)
Q Consensus       124 -----------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~------  173 (228)
                                             . ....++.++|+||||+++++|++  |..||.+.+.......+.......      
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07880         164 LARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLT--GKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ  241 (343)
T ss_pred             cccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence                                   0 11246788999999999999999  668888765543322221110000      


Q ss_pred             ------------Ccc-c---c-CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          174 ------------ELQ-V---F-LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       174 ------------~~~-~---~-~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                                  ..+ .   . ......++.++.+++.+|++.+|++|||+.+++.  .++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence                        000 0   0 0012356788999999999999999999999994  44444

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.87  E-value=3.5e-21  Score=155.04  Aligned_cols=174  Identities=23%  Similarity=0.341  Sum_probs=129.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      |+..+.||+|.||.||+|....   ++..+++|.+.         ..+.+|+.+++.++|+|++++++++......++++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKK---TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecC---CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence            3556789999999999999875   68899999885         34678999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ + ++|.+++...                              ++++                              
T Consensus        78 e~~-~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  155 (282)
T cd07829          78 EYC-D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY  155 (282)
T ss_pred             cCc-C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc
Confidence            998 7 6898888543                              1111                              


Q ss_pred             --------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------------c
Q psy796          124 --------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------------Q  176 (228)
Q Consensus       124 --------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------~  176 (228)
                                    . ....++.++||||||++++||++  +..||...........+.........            .
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (282)
T cd07829         156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT--GKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK  233 (282)
T ss_pred             CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh--CCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence                          1 11256778999999999999999  56888776655443333221100000            0


Q ss_pred             ccCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 VFLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ~~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+         ..+..+..+.+++.+||+.+|++||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0000         012346789999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.87  E-value=8.2e-21  Score=153.18  Aligned_cols=165  Identities=18%  Similarity=0.246  Sum_probs=120.2

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHH---HHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIR---FLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~---~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      +||+|+||.||++....   .++.||+|.+..          .+..|..   .+....|+|++++++++...+..+++||
T Consensus         1 ~ig~g~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEec---CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence            47999999999998765   678999998731          1233333   3344579999999999998888999999


Q ss_pred             eccccCCHHHHhhhC-----------------------------Cccc--------------------------------
Q psy796          105 YPAQLGDLVQHLNSA-----------------------------DNLT--------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------------  123 (228)
                      |+ ++|+|.+++...                             +|++                                
T Consensus        78 ~~-~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (278)
T cd05606          78 LM-NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV  156 (278)
T ss_pred             cC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcC
Confidence            99 999998887543                             2222                                


Q ss_pred             ----------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 ----------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 ----------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                . .+..++.++||||||++++||++  |..||............ .....    .....|..++.++.++
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~--g~~p~~~~~~~~~~~~~-~~~~~----~~~~~~~~~s~~~~~l  229 (278)
T cd05606         157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR--GHSPFRQHKTKDKHEID-RMTLT----MAVELPDSFSPELRSL  229 (278)
T ss_pred             CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh--CCCCCCCCCccchHHHH-HHhhc----cCCCCCCcCCHHHHHH
Confidence                      1 12247788999999999999999  56888765332211111 11100    0233455678999999


Q ss_pred             HHHhhccCCCCCC-----CHHHHHHH
Q psy796          193 MCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       193 i~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      +.+|+..+|.+||     ++.+++++
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         230 LEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             HHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            9999999999999     99999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0667|consensus

Probab=99.87  E-value=2.7e-21  Score=164.53  Aligned_cols=175  Identities=21%  Similarity=0.223  Sum_probs=135.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC------CCCcceeeeeeeCCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ------DPNLVSILGVCTGEQPP   99 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~------h~niv~~~g~~~~~~~~   99 (228)
                      +|++.++||+|+||.|-+|....   +++.||||+++      ..-..|+.+|..++      .-|+|+++++|.-.+..
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~---T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHK---TGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEecccccceeEEEEecC---CCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            45678999999999999998876   78999999996      33467899998885      35899999999999999


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +||+|.. . -+|+++|+.+                               .|||                         
T Consensus       264 ciVfELL-~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  264 CIVFELL-S-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eeeehhh-h-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            9999998 5 8999999876                               3343                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh--------------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY--------------  171 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~--------------  171 (228)
                                        +.+.+|+.+.||||||||+.||++  |.+-|.+.+..+.+..+.....              
T Consensus       342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t--G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~  419 (586)
T KOG0667|consen  342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT--GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAH  419 (586)
T ss_pred             CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc--CccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccc
Confidence                              667899999999999999999999  6788888877766655544210              


Q ss_pred             ---CC-Cccc--------------------------cCCCC----------C-CCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy796          172 ---GG-ELQV--------------------------FLPKP----------S-LCPRDIYDLMCDCWKRDQTMRPTFKQI  210 (228)
Q Consensus       172 ---~~-~~~~--------------------------~~~~~----------~-~~~~~l~~li~~c~~~~p~~Rps~~~v  210 (228)
                         .. ...+                          ....|          . .-...+.+++.+|+..||.+|+|..+.
T Consensus       420 kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qa  499 (586)
T KOG0667|consen  420 KFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQA  499 (586)
T ss_pred             eehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHH
Confidence               00 0000                          00011          0 012357899999999999999999999


Q ss_pred             HHH
Q psy796          211 YSF  213 (228)
Q Consensus       211 ~~~  213 (228)
                      ++|
T Consensus       500 l~H  502 (586)
T KOG0667|consen  500 LNH  502 (586)
T ss_pred             hcC
Confidence            874

>KOG0696|consensus

Probab=99.86  E-value=7.9e-22  Score=160.30  Aligned_cols=169  Identities=21%  Similarity=0.328  Sum_probs=142.7

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHHH----------HHHHHHHhhC-CCCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFLSSL-QDPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~~----------~~e~~~l~~l-~h~niv~~~g~   92 (228)
                      +.-.|...++.+..+||+|+||+|.++.-+.   ....+|||+++++.          +.|-++|..- +.|.++.++.+
T Consensus       342 ~~d~i~~tDFnFl~VlGKGSFGKVlLaerkg---tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc  418 (683)
T KOG0696|consen  342 KRDRIKATDFNFLMVLGKGSFGKVLLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC  418 (683)
T ss_pred             cccceeecccceEEEeccCccceeeeecccC---cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH
Confidence            3346777889999999999999999997665   67889999997553          4566666655 68899999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      ++.-+.+|+||||+ .+|+|--++..-                             |||+                    
T Consensus       419 FQTmDRLyFVMEyv-nGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmc  497 (683)
T KOG0696|consen  419 FQTMDRLYFVMEYV-NGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMC  497 (683)
T ss_pred             hhhhhheeeEEEEe-cCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccc
Confidence            99999999999999 999997766543                             4544                    


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              +...+|+.++|.|||||+||||+.  |++||.+.+-.++.+.+...        ..
T Consensus       498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla--GQpPFdGeDE~elF~aI~eh--------nv  567 (683)
T KOG0696|consen  498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--GQPPFDGEDEDELFQAIMEH--------NV  567 (683)
T ss_pred             cccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHHc--------cC
Confidence                                    556689999999999999999999  78999999999999988765        45


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPT  206 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps  206 (228)
                      ..|..++.|..+++...+...|.+|..
T Consensus       568 syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  568 SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             cCcccccHHHHHHHHHHhhcCCccccC
Confidence            678899999999999999999999954

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.86  E-value=9.4e-21  Score=155.11  Aligned_cols=81  Identities=23%  Similarity=0.421  Sum_probs=67.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeeeCC--CCCe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCTGE--QPPW  100 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~~  100 (228)
                      |.+.+.||+|+||.||+|..... ..+..||+|.+..          .+.+|+.++..++|+||+++++++.+.  ...+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            67788999999999999998532 1468999998853          467899999999999999999999887  6789


Q ss_pred             EEEeeccccCCHHHHh
Q psy796          101 LVMEYPAQLGDLVQHL  116 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l  116 (228)
                      +||||+ + +++.+++
T Consensus        81 lv~e~~-~-~~l~~~~   94 (316)
T cd07842          81 LLFDYA-E-HDLWQII   94 (316)
T ss_pred             EEEeCC-C-cCHHHHH
Confidence            999998 6 5666554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG4645|consensus

Probab=99.86  E-value=4.5e-23  Score=185.96  Aligned_cols=165  Identities=22%  Similarity=0.351  Sum_probs=136.3

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +..||.|.||+||.|.-..   +|...|+|.++         ..+.+|..+|..++|||+|+++|+-...+.++|.||||
T Consensus      1240 g~~Ig~G~fG~VYtavN~~---tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLD---TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             ccccCCcceeeeEEeecCC---ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            4589999999999998765   78899999885         44789999999999999999999999888999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       .+|+|.+.+...                             ||++                                  
T Consensus      1317 -~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1317 -EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred             -ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence             999999987654                             4444                                  


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                       -.+....-+.||||+||+++||.|  |+.||...++. .+.-++..+.       .++.|..+
T Consensus      1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~t--GkrPW~~~dne~aIMy~V~~gh-------~Pq~P~~l 1466 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMAT--GKRPWAELDNEWAIMYHVAAGH-------KPQIPERL 1466 (1509)
T ss_pred             HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeec--CCCchhhccchhHHHhHHhccC-------CCCCchhh
Confidence                             122344578999999999999999  67899877654 4444454443       55678889


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+-++++.+|++.||..|-++.|++++
T Consensus      1467 s~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1467 SSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            9999999999999999999998888764

>KOG0612|consensus

Probab=99.86  E-value=3.8e-22  Score=178.04  Aligned_cols=176  Identities=18%  Similarity=0.237  Sum_probs=146.4

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+.+++|+++++||+|+||.|+..++++   .++.+|+|++.+          -|..|-.+|..-+.+=|+.++-+|+
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~---t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKS---TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeec---cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            345678999999999999999999999987   789999999953          2566778888778899999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      ++.++|+||||+ +||+|...|.+.                             ||++                      
T Consensus       146 D~~~LYlVMdY~-pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClk  224 (1317)
T KOG0612|consen  146 DERYLYLVMDYM-PGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK  224 (1317)
T ss_pred             CccceEEEEecc-cCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHh
Confidence            999999999999 999998887654                             4444                      


Q ss_pred             ---------------------------ccc-CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ---------------------------RDR-DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ---------------------------~~~-~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                 ..+ +.|+..+|.||+||++|||+.  |.+||...+.......|++...    
T Consensus       225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly--G~TPFYadslveTY~KIm~hk~----  298 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY--GETPFYADSLVETYGKIMNHKE----  298 (1317)
T ss_pred             cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc--CCCcchHHHHHHHHHHHhchhh----
Confidence                                       233 789999999999999999999  7899999888888888887632    


Q ss_pred             cccCCCC--CCCcHHHHHHHHHhhccCCCCCCC---HHHHHHH
Q psy796          176 QVFLPKP--SLCPRDIYDLMCDCWKRDQTMRPT---FKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~--~~~~~~l~~li~~c~~~~p~~Rps---~~~v~~~  213 (228)
                        .+.+|  ..+|++.++||.+.+. +|+.|..   ++++..|
T Consensus       299 --~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  299 --SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             --hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence              34444  5689999999998765 4778877   8777653

>KOG0587|consensus

Probab=99.86  E-value=3.6e-21  Score=168.11  Aligned_cols=179  Identities=17%  Similarity=0.357  Sum_probs=142.5

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeC-
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTG-   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~-   95 (228)
                      +....+.+.+++.++||.|.+|+||+++..+   +++.+|+|++.      +++..|.++|+.. .|||++.++|++.. 
T Consensus        12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~---~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVK---TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             hhCCCCCCccEEEEEEeeccceeEEEEeeee---cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            3444566778999999999999999999987   88999999884      5677788888877 69999999999863 


Q ss_pred             ----CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------
Q psy796           96 ----EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------  123 (228)
Q Consensus        96 ----~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------  123 (228)
                          .+.+||||||| .+|+..|.++..                               ||++                 
T Consensus        89 ~~~~~DqLWLVMEfC-~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDF  167 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFC-GGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDF  167 (953)
T ss_pred             cCCCCCeEEEEeecc-CCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeee
Confidence                34789999999 999999977643                               3333                 


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      .....|+..+|+||+|++..||--  |.+|+.++-+...+-.+-+   
T Consensus       168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad--G~PPl~DmHPmraLF~IpR---  242 (953)
T KOG0587|consen  168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE--GAPPLCDMHPMRALFLIPR---  242 (953)
T ss_pred             eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC--CCCCccCcchhhhhccCCC---
Confidence                                            223357888999999999999999  7799988777655433321   


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                        ..++++-.|..++.++.++|+.|+..|.++||++.++++|
T Consensus       243 --NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  243 --NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             --CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence              1233444577889999999999999999999999998863

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.85  E-value=8.1e-20  Score=151.02  Aligned_cols=181  Identities=18%  Similarity=0.213  Sum_probs=125.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCC----C
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGE----Q   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~----~   97 (228)
                      +|++.+.||+|+||.||++...... ++..||+|.+.         ..+.+|+.++.++ .|+||+++++.+...    .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETS-EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCC-cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            3678899999999999999986511 27789999874         3467899999998 599999999875422    3


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++++|+ . ++|.+++...                             +|++                         
T Consensus        80 ~~~~~~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          80 ELYLYEELM-E-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             cEEEEEecc-c-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence            568889987 5 7888877533                             2222                         


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC-------
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG-------  172 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------  172 (228)
                                              .....++.++||||||+++++|++  +.+||...+.......+......       
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLG--RKPVFKGKDYVDQLNQILQVLGTPDEETLS  235 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence                                    011245778999999999999998  56888776544333222211100       


Q ss_pred             ---------------CCccccCC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          173 ---------------GELQVFLP-KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       173 ---------------~~~~~~~~-~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                                     ......+. ....++.++.+++.+||+.+|.+|||+.+++.  .|.+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence                           00000000 11335788999999999999999999999985  44444

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0604|consensus

Probab=99.85  E-value=1.5e-21  Score=152.60  Aligned_cols=167  Identities=22%  Similarity=0.313  Sum_probs=133.6

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHHHHHh-hCCCCCcceeeeeeeCC----CCCeEEEeecccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREIRFLS-SLQDPNLVSILGVCTGE----QPPWLVMEYPAQL  109 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~~~l~-~l~h~niv~~~g~~~~~----~~~~lv~e~~~~~  109 (228)
                      ++||-|-.|+|..+..++   .+..+|+|++.  ..-.+|+++=- .-.|+|||++++++.+.    .-+.+|||.+ +|
T Consensus        68 qvLG~GinGkV~~C~~k~---T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m-eG  143 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKR---TQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM-EG  143 (400)
T ss_pred             hhhccccCCceEEEEecc---chhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc-cc
Confidence            789999999999999987   88999999996  55778988744 44799999999998653    2467999999 99


Q ss_pred             CCHHHHhhhC-------------------------------Cccc-----------------------------------
Q psy796          110 GDLVQHLNSA-------------------------------DNLT-----------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~-------------------------------r~l~-----------------------------------  123 (228)
                      |.|+.-+..+                               ||++                                   
T Consensus       144 GeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TP  223 (400)
T KOG0604|consen  144 GELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTP  223 (400)
T ss_pred             hHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCC
Confidence            9999988765                               4444                                   


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH----HHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                 +....|+..+|+||+||++|-|++  |.+||.+....    ....++..+.+.-    ..+.++.+++.
T Consensus       224 c~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC--GyPPFYS~hg~aispgMk~rI~~gqy~F----P~pEWs~VSe~  297 (400)
T KOG0604|consen  224 CFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC--GYPPFYSNHGLAISPGMKRRIRTGQYEF----PEPEWSCVSEA  297 (400)
T ss_pred             cccccccCHHHhCchhcCCCCCccchhHHHHHhhc--CCCcccccCCccCChhHHhHhhccCccC----CChhHhHHHHH
Confidence                       445578999999999999999999  78999865442    4555665554321    12234668999


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++|...+..+|.+|.|+.+++.+
T Consensus       298 aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  298 AKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             HHHHHHHHhcCCchhheeHHHhhcC
Confidence            9999999999999999999999864

>KOG4250|consensus

Probab=99.84  E-value=7e-21  Score=163.22  Aligned_cols=179  Identities=27%  Similarity=0.433  Sum_probs=131.5

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC------C
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ------P   98 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~------~   98 (228)
                      ....+.||+|+||.||+|+.+.   .|+.||||.++        +.+.+|+++|++++|+|||+++++-....      -
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnke---tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKE---TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             eeehhhhcCCccceeeeecccc---cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence            3455789999999999999776   89999999995        56899999999999999999998875543      3


Q ss_pred             CeEEEeeccccCCHHHHhhhC--------------------------------Cccc-----------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT-----------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~-----------------------  123 (228)
                      ..++|||| .+|+|...|.+.                                ||||                       
T Consensus        92 ~vlvmEyC-~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   92 PVLVMEYC-SGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             ceEEEeec-CCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            57999999 999999998766                                6666                       


Q ss_pred             ------------------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh----HHHHHHHHHhhhCC-
Q psy796          124 ------------------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN----EQVIQNAEHMYYGG-  173 (228)
Q Consensus       124 ------------------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~----~~~~~~~~~~~~~~-  173 (228)
                                              .. ...|+.-+|.|||||++||..|  |..||.....    .++...+......+ 
T Consensus       171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caT--G~lPF~p~~~pk~~~~~~~~~~tkkp~~v  248 (732)
T KOG4250|consen  171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECAT--GELPFIPFGGPKNNKEIMWHIITKKPSGV  248 (732)
T ss_pred             cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhc--cCCCCCcCCCccccchhhhhhhccCCCce
Confidence                                    22 4788999999999999999999  6788865432    23333332221110 


Q ss_pred             ------------CccccCCCCCCCcH----HHHHHHHHhhccCCCCCC--CHHHHHHHHHHH
Q psy796          174 ------------ELQVFLPKPSLCPR----DIYDLMCDCWKRDQTMRP--TFKQIYSFMKRS  217 (228)
Q Consensus       174 ------------~~~~~~~~~~~~~~----~l~~li~~c~~~~p~~Rp--s~~~v~~~l~~~  217 (228)
                                  ++...+|+|..++.    .+..++..++..++.+|-  .+.+....+..|
T Consensus       249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI  310 (732)
T KOG4250|consen  249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI  310 (732)
T ss_pred             eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence                        01112333333333    455667778888888887  777777776666

>KOG0594|consensus

Probab=99.84  E-value=5.9e-20  Score=146.72  Aligned_cols=181  Identities=20%  Similarity=0.303  Sum_probs=137.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCC-cceeeeeeeCCC--
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPN-LVSILGVCTGEQ--   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~n-iv~~~g~~~~~~--   97 (228)
                      ...|+..+.||+|+||.||+|+...   ++..||+|.++         ..-.+|+.+|+.++|+| |+++++++...+  
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~---~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~   86 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKR---TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNH   86 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEec---CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccc
Confidence            4556777789999999999999987   78999999995         22479999999999999 999999998877  


Q ss_pred             ----CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc-----------------
Q psy796           98 ----PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT-----------------  123 (228)
Q Consensus        98 ----~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~-----------------  123 (228)
                          ..++++||. . -+|..|+...                                 ||||                 
T Consensus        87 ~~~~~l~lvfe~~-d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDF  164 (323)
T KOG0594|consen   87 RGIGKLYLVFEFL-D-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADF  164 (323)
T ss_pred             cccceEEEEEEee-c-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeecc
Confidence                788999997 4 6666665432                                 5555                 


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC--
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG--  173 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~--  173 (228)
                                                  +....|+...||||+||++.||++  +.+-|.+.+..+....+-+.....  
T Consensus       165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~--~~~LFpG~se~~ql~~If~~lGtP~e  242 (323)
T KOG0594|consen  165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT--RRPLFPGDSEIDQLFRIFRLLGTPNE  242 (323)
T ss_pred             chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHHcCCCCc
Confidence                                        444479999999999999999999  678888888776666555432211  


Q ss_pred             C-c---------cccCCCC----------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 E-L---------QVFLPKP----------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ~-~---------~~~~~~~----------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                      . +         ...++.+          .....+..+++.+|++++|..|.|+...+.|  +..+
T Consensus       243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            0 0         0011111          1123478999999999999999999999986  5555

>KOG0603|consensus

Probab=99.84  E-value=6.6e-21  Score=161.82  Aligned_cols=168  Identities=21%  Similarity=0.297  Sum_probs=136.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH---HHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEee
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD---SLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~---~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      .+.+++...+|.|+|+.|..+....   .++..++|++.+.   -.+|+.++... .|+|++++.+++.+....++|||.
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~---t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~  397 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSP---TDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL  397 (612)
T ss_pred             chhhccccccCCCCccceeeeeccc---cccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence            3456777779999999999998876   7889999999644   77888776665 799999999999999999999999


Q ss_pred             ccccCCHHHHhhhC----------------------------Cccc----------------------------------
Q psy796          106 PAQLGDLVQHLNSA----------------------------DNLT----------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~----------------------------r~l~----------------------------------  123 (228)
                      + .++.+.+.+...                            |||+                                  
T Consensus       398 l-~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t  476 (612)
T KOG0603|consen  398 L-DGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT  476 (612)
T ss_pred             c-cccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence            9 878776644332                            5555                                  


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                              .....|+.++|+||||++||+|++  |..||...... ++...+..          ..+...+|++.++|+.
T Consensus       477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~--G~tp~~~~P~~~ei~~~i~~----------~~~s~~vS~~AKdLl~  544 (612)
T KOG0603|consen  477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT--GRTLFAAHPAGIEIHTRIQM----------PKFSECVSDEAKDLLQ  544 (612)
T ss_pred             hcccChhhhccCCCCcchhhHHHHHHHHHHHh--CCCccccCCchHHHHHhhcC----------CccccccCHHHHHHHH
Confidence                    446689999999999999999999  67999877766 44444432          2233678999999999


Q ss_pred             HhhccCCCCCCCHHHHHHH
Q psy796          195 DCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       195 ~c~~~~p~~Rps~~~v~~~  213 (228)
                      +|++.||.+||++.++..+
T Consensus       545 ~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  545 QLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             HhccCChhhCcChhhhccC
Confidence            9999999999999998864

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.83  E-value=1.7e-19  Score=141.36  Aligned_cols=159  Identities=26%  Similarity=0.402  Sum_probs=122.5

Q ss_pred             ceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccccCCHHH
Q psy796           43 HLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQ  114 (228)
Q Consensus        43 ~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~  114 (228)
                      +||.||+|....   ++..+++|.+.        ..+.+|++.+++++|+|++++++.+......++++||+ ++++|.+
T Consensus         1 ~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~-~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKK---TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYC-DGGDLFD   76 (244)
T ss_pred             CceEEEEEEECC---CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCC-CCCCHHH
Confidence            589999999865   67899999983        56789999999999999999999998888899999999 8889999


Q ss_pred             HhhhCC-----------------------------ccc------------------------------------------
Q psy796          115 HLNSAD-----------------------------NLT------------------------------------------  123 (228)
Q Consensus       115 ~l~~~r-----------------------------~l~------------------------------------------  123 (228)
                      ++....                             +++                                          
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE  156 (244)
T smart00220       77 LLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPE  156 (244)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHH
Confidence            876431                             111                                          


Q ss_pred             -cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC-CChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCC
Q psy796          124 -RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQ  201 (228)
Q Consensus       124 -~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p  201 (228)
                       .....++.++||||||+++++|++  +..||.. .........+......     .......++.++.+++.+||..+|
T Consensus       157 ~~~~~~~~~~~Di~slG~~l~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p  229 (244)
T smart00220      157 VLLGKGYGKAVDVWSLGVILYELLT--GKPPFPGDDQLLELFKKIGKPKPP-----FPPPEWKISPEAKDLIRKLLVKDP  229 (244)
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHhccCCC-----CccccccCCHHHHHHHHHHccCCc
Confidence             113456789999999999999999  5688876 3444444443322110     001111178899999999999999


Q ss_pred             CCCCCHHHHHH
Q psy796          202 TMRPTFKQIYS  212 (228)
Q Consensus       202 ~~Rps~~~v~~  212 (228)
                      .+||++.++++
T Consensus       230 ~~Rp~~~~~~~  240 (244)
T smart00220      230 EKRLTAEEALQ  240 (244)
T ss_pred             hhccCHHHHhh
Confidence            99999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0983|consensus

Probab=99.83  E-value=1e-20  Score=146.50  Aligned_cols=177  Identities=19%  Similarity=0.333  Sum_probs=132.5

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~~   94 (228)
                      +.+..+..+++++..||+|+-|.|+++++++   .+..+|||.+.        +++...+.++..- ..|+||+-+|+|.
T Consensus        85 ~r~~~dindl~~l~dlGsGtcG~V~k~~~rs---~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi  161 (391)
T KOG0983|consen   85 QRYQADINDLENLGDLGSGTCGQVWKMRFRS---TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI  161 (391)
T ss_pred             cccccChHHhhhHHhhcCCCccceEEEEEcc---cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence            4455556677788899999999999999987   78999999994        3344555554433 4899999999999


Q ss_pred             CCCCCeEEEeeccccCCHHH---------------------------HhhhC-----Cccc-------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQ---------------------------HLNSA-----DNLT-------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~---------------------------~l~~~-----r~l~-------------------  123 (228)
                      .+..+++-||.+   +.-.+                           ||+..     ||++                   
T Consensus       162 ~n~dV~IcMelM---s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGI  238 (391)
T KOG0983|consen  162 TNTDVFICMELM---STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGI  238 (391)
T ss_pred             eCchHHHHHHHH---HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccc
Confidence            999899999976   22222                           22111     4444                   


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~  175 (228)
                                                 .+...|+-.+||||||++++||.|  |..||.+.+-. ++...+.+.     .
T Consensus       239 sGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT--g~yPy~~c~tdFe~ltkvln~-----e  311 (391)
T KOG0983|consen  239 SGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT--GQYPYKGCKTDFEVLTKVLNE-----E  311 (391)
T ss_pred             cceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc--ccCCCCCCCccHHHHHHHHhc-----C
Confidence                                       234468888999999999999999  67999986543 555555431     2


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.++.....+....+++..|++.|+.+||...++++|
T Consensus       312 PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  312 PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            23555555689999999999999999999999998863

>KOG0607|consensus

Probab=99.83  E-value=1.2e-20  Score=148.94  Aligned_cols=163  Identities=19%  Similarity=0.296  Sum_probs=133.2

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      .++||+|.++.|--+.-..   ++..+|||++.       .++.+|++++.+. .|+||+.++.+|+++.++|||||-+ 
T Consensus        83 ~e~LGeGAyasVqtcv~i~---t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm-  158 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQ---TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM-  158 (463)
T ss_pred             HHHhcCccceeeeeeeeec---cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc-
Confidence            4689999999998887655   78999999993       6789999999887 5999999999999999999999999 


Q ss_pred             ccCCHHHHhhhC-----------------------------Cccc-----------------------------------
Q psy796          108 QLGDLVQHLNSA-----------------------------DNLT-----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~-----------------------------r~l~-----------------------------------  123 (228)
                      .||+|..+++.+                             ||++                                   
T Consensus       159 ~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa  238 (463)
T KOG0607|consen  159 RGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA  238 (463)
T ss_pred             cCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence            999998888655                             4444                                   


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---------------HHHH
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---------------QVIQ  164 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---------------~~~~  164 (228)
                                              .+...|+.++|.|||||++|-|++  |.+||.+.=..               .++.
T Consensus       239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLs--GYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe  316 (463)
T KOG0607|consen  239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLS--GYPPFVGHCGADCGWDRGEVCRVCQNKLFE  316 (463)
T ss_pred             CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHh--CCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence                                    333458899999999999999999  78999753221               2334


Q ss_pred             HHHHhhhCCCccccCCC----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          165 NAEHMYYGGELQVFLPK----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       165 ~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .|+.+        .+.+    +..++.+.+++++..+..++.+|.++.++++
T Consensus       317 sIQEG--------kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  317 SIQEG--------KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHhcc--------CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            44444        2333    4568999999999999999999999999886

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.83  E-value=7.7e-20  Score=144.17  Aligned_cols=148  Identities=16%  Similarity=0.225  Sum_probs=112.9

Q ss_pred             cceeeEEEEEEeccCCCceeEEeecchH--HHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC
Q psy796           42 CHLGEMMICETEDIELDTEKVAVRTCRG--DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus        42 G~fg~V~~~~~~~~~~~~~~vavK~~~~--~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~  119 (228)
                      |.||.||++....   +++.+|+|.++.  ...+|...+....|+|++++++++...+..+++|||+ ++|+|.+++.+.
T Consensus         4 g~~~~v~~~~~~~---~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~   79 (237)
T cd05576           4 GVIDKVLLVMDTR---TQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHA-EGGKLWSHISKF   79 (237)
T ss_pred             cccceEEEEEEcc---CCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecC-CCCCHHHHHHHh
Confidence            7799999998876   788999999963  3556666666678999999999999888999999999 999999887543


Q ss_pred             -----------------------------Cccc-----------------------------------------cccCCC
Q psy796          120 -----------------------------DNLT-----------------------------------------RDRDRY  129 (228)
Q Consensus       120 -----------------------------r~l~-----------------------------------------~~~~~~  129 (228)
                                                   +|++                                         .....+
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  159 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEE  159 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCC
Confidence                                         2222                                         112346


Q ss_pred             CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCH
Q psy796          130 TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       130 ~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~  207 (228)
                      +.++||||+|++++||++  |..|+...... .    ..       ......|..++.++++++.+||+.||++||++
T Consensus       160 ~~~~DvwslG~il~el~~--g~~~~~~~~~~-~----~~-------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         160 TEACDWWSLGAILFELLT--GKTLVECHPSG-I----NT-------HTTLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             CchhhHHHHHHHHHHHHH--CcchhhcCchh-c----cc-------ccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            778999999999999999  45555432111 0    00       00223456688999999999999999999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1006|consensus

Probab=99.82  E-value=5.2e-21  Score=147.47  Aligned_cols=181  Identities=19%  Similarity=0.325  Sum_probs=135.7

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHH-hhCCCCCcceeee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFL-SSLQDPNLVSILG   91 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l-~~l~h~niv~~~g   91 (228)
                      .....+++..++++-...||.|.||.|++-.++.   .++..|||.++        .++..|.+.. +.-+.+|||+++|
T Consensus        54 ~~~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~---sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG  130 (361)
T KOG1006|consen   54 DDAHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKP---SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG  130 (361)
T ss_pred             CcccccccccchHHHHHHhcCCcchhhhhhhcCc---cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence            3456788888888888899999999999998876   78999999994        3456666554 4447999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------------Cccc-------------
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT-------------  123 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~-------------  123 (228)
                      +...+...|+-||.+ . -+|+.+-..-                                   ||++             
T Consensus       131 a~F~EGdcWiCMELM-d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vK  208 (361)
T KOG1006|consen  131 ALFSEGDCWICMELM-D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVK  208 (361)
T ss_pred             hhhcCCceeeeHHHH-h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEe
Confidence            999999999999988 4 4554332211                                   3443             


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      -....|+-+|||||+|++++|+.|  |..||.+++.  ++..+.....
T Consensus       209 LCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAt--G~fPyr~w~s--vfeql~~Vv~  284 (361)
T KOG1006|consen  209 LCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVAT--GNFPYRKWDS--VFEQLCQVVI  284 (361)
T ss_pred             eecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeec--CCCCcchHHH--HHHHHHHHHc
Confidence                                            222358899999999999999999  6799998876  3333333333


Q ss_pred             CCCccccCCCCCC---CcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          172 GGELQVFLPKPSL---CPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       172 ~~~~~~~~~~~~~---~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++.  +.+..+..   .+..+..++..|+..|...||...++..
T Consensus       285 gdp--p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  285 GDP--PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             CCC--CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            222  12333333   6788999999999999999999999875

>KOG0195|consensus

Probab=99.81  E-value=1.7e-20  Score=145.37  Aligned_cols=178  Identities=22%  Similarity=0.403  Sum_probs=144.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..-|+-+++.+...|.+...|..++|+|     .+-.+++|+++         .+|..|.--|+-+.||||+.++|+|..
T Consensus       184 ~~gid~~~lnl~tkl~e~hsgelwrgrw-----qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns  258 (448)
T KOG0195|consen  184 YTGIDVSSLNLITKLAESHSGELWRGRW-----QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS  258 (448)
T ss_pred             ccCcchhhhhhhhhhccCCCcccccccc-----cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC
Confidence            4456667788888999999999999999     56677777773         678888888888999999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhCCccc----------------------------------------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSADNLT----------------------------------------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~r~l~----------------------------------------------------  123 (228)
                      ..++.++..|+ +.|+|+..|+....+-                                                    
T Consensus       259 ppnlv~isq~m-p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~  337 (448)
T KOG0195|consen  259 PPNLVIISQYM-PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT  337 (448)
T ss_pred             CCCceEeeeec-cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence            88899999999 9999999998661000                                                    


Q ss_pred             --------------------cccC---CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH-hhhCCCccccC
Q psy796          124 --------------------RDRD---RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH-MYYGGELQVFL  179 (228)
Q Consensus       124 --------------------~~~~---~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~  179 (228)
                                          ++..   .--.++|+|||++++|||.|  +..||.+.++.+.--++.- +.       +.
T Consensus       338 kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~t--revpfadlspmecgmkialegl-------rv  408 (448)
T KOG0195|consen  338 KFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNT--REVPFADLSPMECGMKIALEGL-------RV  408 (448)
T ss_pred             eeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhc--cccccccCCchhhhhhhhhccc-------cc
Confidence                                1111   12367999999999999999  7899999999876544432 21       44


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      -.|++++..+..|+.-|+.+||.+||.++.|+-.|++.
T Consensus       409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            56788999999999999999999999999999888875

>KOG0668|consensus

Probab=99.81  E-value=6.5e-20  Score=138.84  Aligned_cols=196  Identities=17%  Similarity=0.262  Sum_probs=139.3

Q ss_pred             CCCccccCCCCCccccc--------CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhh
Q psy796           13 SMGQSYKCREGDVVPIP--------RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSS   80 (228)
Q Consensus        13 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~   80 (228)
                      ..+......+.+.|...        .+++++.+.+|.|.++.||.|..-.   +...++||+++    +.+.+|+.+|..
T Consensus        12 vya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~---~~eK~ViKiLKPVkkkKIkREikIL~n   88 (338)
T KOG0668|consen   12 VYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINIT---NNEKCVIKILKPVKKKKIKREIKILQN   88 (338)
T ss_pred             hhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccC---CCceEEEeeechHHHHHHHHHHHHHHh
Confidence            33444445555666653        3677888999999999999998655   77899999995    778999999999


Q ss_pred             CC-CCCcceeeeeeeCCC--CCeEEEeeccccCCHHHHhhhC--------------------------Cccc--------
Q psy796           81 LQ-DPNLVSILGVCTGEQ--PPWLVMEYPAQLGDLVQHLNSA--------------------------DNLT--------  123 (228)
Q Consensus        81 l~-h~niv~~~g~~~~~~--~~~lv~e~~~~~g~L~~~l~~~--------------------------r~l~--------  123 (228)
                      +. |+||++++++..+..  .+.||+||+ .+.+....-..-                          ||++        
T Consensus        89 L~gg~NIi~L~DiV~Dp~SktpaLiFE~v-~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh  167 (338)
T KOG0668|consen   89 LRGGPNIIKLLDIVKDPESKTPSLIFEYV-NNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH  167 (338)
T ss_pred             ccCCCCeeehhhhhcCccccCchhHhhhh-ccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech
Confidence            97 999999999997753  678999998 766653321111                          3333        


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           .+-..|+..-|+|||||++..|+..+ .+.|.+.++.+.+-.+
T Consensus       168 ~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk-epFFhG~dN~DQLVkI  246 (338)
T KOG0668|consen  168 ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK-EPFFHGHDNYDQLVKI  246 (338)
T ss_pred             hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc-CcccCCCCCHHHHHHH
Confidence                                                 44557889999999999999999942 4555667766544333


Q ss_pred             HHhhhCC-----------Ccc---------------ccCCCC---CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMYYGG-----------ELQ---------------VFLPKP---SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~~~~-----------~~~---------------~~~~~~---~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ......+           ..+               .++..+   ...++++.+++.+.+.+|.++|+|+.+.+.|
T Consensus       247 akVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  247 AKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            3321100           000               011111   1146899999999999999999999998864

>KOG1151|consensus

Probab=99.80  E-value=4.2e-20  Score=151.58  Aligned_cols=176  Identities=20%  Similarity=0.308  Sum_probs=131.5

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      .-.++|-+...||.|+|+.||+++.-.   ..+-||+|+-.              +...+|-.+-+.+.||-||++++++
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~---EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf  536 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLT---EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF  536 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccc---hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence            334557778899999999999998764   67889999872              2245778888899999999999998


Q ss_pred             e-CCCCCeEEEeeccccCCHHHHhhhCCccc-------------------------------------------------
Q psy796           94 T-GEQPPWLVMEYPAQLGDLVQHLNSADNLT-------------------------------------------------  123 (228)
Q Consensus        94 ~-~~~~~~lv~e~~~~~g~L~~~l~~~r~l~-------------------------------------------------  123 (228)
                      . +...++-|+||| +|.+|+-||+.++-+.                                                 
T Consensus       537 slDtdsFCTVLEYc-eGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  537 SLDTDSFCTVLEYC-EGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             eeccccceeeeeec-CCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence            6 445789999999 9999999998772111                                                 


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-H
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-V  162 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~  162 (228)
                                                              -..-..+.|+||||.||++|+.+.  |..||......+ +
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY--GrKPFGhnqsQQdI  693 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY--GRKPFGHNQSQQDI  693 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc--cCCCCCCchhHHHH
Confidence                                                    123357899999999999999999  668887544332 2


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++. .....+.  -..+|..+.++.+.+++|.+|+++.-++|....++..
T Consensus       694 Lqe-NTIlkAt--EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  694 LQE-NTILKAT--EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             Hhh-hchhcce--eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            211 1111111  1134555678899999999999999999988877764

>KOG0614|consensus

Probab=99.79  E-value=7e-20  Score=152.17  Aligned_cols=177  Identities=14%  Similarity=0.204  Sum_probs=148.3

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...++.-++++.+.+||-|+||+|-+....+   ....+|+|+++          +.+..|-.++...+.+.||+++-.|
T Consensus       413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~---~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf  489 (732)
T KOG0614|consen  413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNS---QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF  489 (732)
T ss_pred             hhcccchhhhhhhhhcccCccceEEEEEecc---cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence            3445566788888999999999999998864   33458999985          4467889999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      .++..+|++||-| -||.|...|++.                             |||+                     
T Consensus       490 rd~kyvYmLmEaC-lGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAK  568 (732)
T KOG0614|consen  490 RDSKYVYMLMEAC-LGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAK  568 (732)
T ss_pred             ccchhhhhhHHhh-cCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHH
Confidence            9999999999999 999998877654                             5666                     


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +.+...+.++|.||+|++++||++  |.+||.+.++......+..+..      ...+
T Consensus       569 ki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~--G~pPFs~~dpmktYn~ILkGid------~i~~  640 (732)
T KOG0614|consen  569 KIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT--GSPPFSGVDPMKTYNLILKGID------KIEF  640 (732)
T ss_pred             HhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc--CCCCCCCCchHHHHHHHHhhhh------hhhc
Confidence                                  445567899999999999999999  6799999999998888877653      4567


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps-----~~~v~~  212 (228)
                      |..++....+++.+.+..+|.+|..     +.+|..
T Consensus       641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK  676 (732)
T ss_pred             ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence            8889999999999999999999965     555554

>KOG0986|consensus

Probab=99.77  E-value=9.4e-19  Score=143.72  Aligned_cols=173  Identities=18%  Similarity=0.271  Sum_probs=138.4

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +.+....+..-++||+|+||.|+.+.-+.   +++-+|.|.+.          ....+|.++|.+++.+.||.+.-++..
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvra---TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT  256 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRA---TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET  256 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEec---chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC
Confidence            45566778889999999999999999887   88999999883          224679999999999999999989999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                      .+.+++|+..+ .||+|.-+|...                               |||+                     
T Consensus       257 kd~LClVLtlM-NGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAv  335 (591)
T KOG0986|consen  257 KDALCLVLTLM-NGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAV  335 (591)
T ss_pred             CCceEEEEEee-cCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEE
Confidence            99999999999 999997666433                               5555                     


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            ++++.|+...|.||+||++|||+.  |..||....-..-...+.+....+    ....
T Consensus       336 ei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~--G~sPFr~~KeKvk~eEvdrr~~~~----~~ey  409 (591)
T KOG0986|consen  336 EIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIA--GHSPFRQRKEKVKREEVDRRTLED----PEEY  409 (591)
T ss_pred             ecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHc--ccCchhhhhhhhhHHHHHHHHhcc----hhhc
Confidence                                  667779999999999999999999  679998765543333333322211    2234


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFK  208 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~  208 (228)
                      +...++++++|....++.||.+|...+
T Consensus       410 ~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  410 SDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             ccccCHHHHHHHHHHHccCHHHhccCC
Confidence            678899999999999999999996544

>KOG0576|consensus

Probab=99.77  E-value=1.2e-19  Score=154.70  Aligned_cols=176  Identities=19%  Similarity=0.314  Sum_probs=141.5

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      -++++|++...+|+|.+|.||+++...   .+..+|+|.++       ...+.|+-+++..+|+||+.++|.+......+
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~---s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKR---SGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccc---cCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcE
Confidence            467789999999999999999999877   78899999996       34678998999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +.|||| .+|+|.+.-+--                             ||++                            
T Consensus        89 icMEyc-gggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~  167 (829)
T KOG0576|consen   89 ICMEYC-GGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA  167 (829)
T ss_pred             EEEEec-CCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh
Confidence            999999 999997743211                             4444                            


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         ...+.|.+++|||+.|++-.|+--+  .+|..+.-+.+....+....   --++.+..+..
T Consensus       168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eL--qpplfdlhpmr~l~LmTkS~---~qpp~lkDk~k  242 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGEL--QPPLFDLHPMRALFLMTKSG---FQPPTLKDKTK  242 (829)
T ss_pred             hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhc--CCcccccchHHHHHHhhccC---CCCCcccCCcc
Confidence                               5566899999999999999998774  45655555555544443332   22234445667


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +++.+-+++..|+..+|.+||+++.+++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee
Confidence            8899999999999999999999998775

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.77  E-value=1.8e-17  Score=148.65  Aligned_cols=84  Identities=18%  Similarity=0.252  Sum_probs=74.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|.+.+.||+|+||.||+|....   .++.||+|+++          ..+.+|+.++..++|+||+++++++......+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKN---NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE
Confidence            568889999999999999999865   68899999984          45778999999999999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhh
Q psy796          101 LVMEYPAQLGDLVQHLNS  118 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~  118 (228)
                      +||||+ .+++|.+++..
T Consensus        81 lVmEy~-~g~~L~~li~~   97 (669)
T cd05610          81 LVMEYL-IGGDVKSLLHI   97 (669)
T ss_pred             EEEeCC-CCCCHHHHHHh
Confidence            999999 99999887753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1035|consensus

Probab=99.77  E-value=1.1e-18  Score=157.14  Aligned_cols=60  Identities=25%  Similarity=0.406  Sum_probs=52.3

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +|+-.++||+|+||.||+++-+-   +|+.+|||.+.        ..+.+|+.+|.+++|||||+++..+.
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKl---DGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWV  547 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKL---DGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWV  547 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecc---cchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence            45556899999999999998765   89999999994        45889999999999999999998653

>KOG0662|consensus

Probab=99.76  E-value=4.1e-18  Score=124.87  Aligned_cols=175  Identities=19%  Similarity=0.277  Sum_probs=129.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.-.+.||+|.+|+||+|+-+.   ....||+|.++         ....+|+.+|+.+.|.|||+++++...+....+|+
T Consensus         4 ydkmekigegtygtvfkarn~~---t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCC---ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence            4455789999999999998765   78899999985         55789999999999999999999998888999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| . .+|..|....                              ||++                              
T Consensus        81 e~c-d-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcy  158 (292)
T KOG0662|consen   81 EFC-D-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY  158 (292)
T ss_pred             HHh-h-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEee
Confidence            998 5 5665554321                              4444                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC---Ccc---------
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG---ELQ---------  176 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~---------  176 (228)
                                     +...-|+...|+||-||++.|+... |.+-|++.+..+...++-......   .++         
T Consensus       159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelana-grplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk  237 (292)
T KOG0662|consen  159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA-GRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK  237 (292)
T ss_pred             eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhc-CCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence                           3344688999999999999999987 457788888776666554432211   110         


Q ss_pred             ccCCCCC---------CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 VFLPKPS---------LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ~~~~~~~---------~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+..|.         .++..=++++++.+.-+|..|-+++..+++
T Consensus       238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            0111111         123345789999999999999999987764

>KOG4236|consensus

Probab=99.76  E-value=3.3e-19  Score=148.92  Aligned_cols=163  Identities=25%  Similarity=0.312  Sum_probs=129.6

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      .++||+|.||+||-|.+++   +++.||||.+.         +.+.+|+++|+++.||.||.+--.++..+.+++|||-.
T Consensus       569 devLGSGQFG~VYgg~hRk---tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl  645 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRK---TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL  645 (888)
T ss_pred             HhhccCCcceeeecceecc---cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh
Confidence            4799999999999999998   89999999993         55789999999999999999998999999999999998


Q ss_pred             cccCCHHH-HhhhC------------------------------Cccc--------------------------------
Q psy796          107 AQLGDLVQ-HLNSA------------------------------DNLT--------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~-~l~~~------------------------------r~l~--------------------------------  123 (228)
                       . |++.+ .|...                              .||+                                
T Consensus       646 -~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  646 -H-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             -c-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence             6 55444 33332                              2222                                


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                    +.+..|+..-|+||.||++|--++  |..||.... ..+..+++..++       ...++..++.+
T Consensus       724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLS--GTFPFNEdEdIndQIQNAaFMy-------Pp~PW~eis~~  794 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLS--GTFPFNEDEDINDQIQNAAFMY-------PPNPWSEISPE  794 (888)
T ss_pred             hhhcCCccccCHHHHhhccccccccceeeeEEEEEEec--ccccCCCccchhHHhhcccccc-------CCCchhhcCHH
Confidence                          667789999999999999999888  678987532 333444443332       12245678899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ..++|...++..-.+|-|.++.+.
T Consensus       795 AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  795 AIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             HHHHHHHHHHHHHHHhcchHhhcc
Confidence            999999999999999999887664

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.75  E-value=8.8e-18  Score=147.57  Aligned_cols=89  Identities=13%  Similarity=0.146  Sum_probs=60.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCC----ceeEEeecchHHHHHHHHHHhhC---CCCCcceeeee-----
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDSLREIRFLSSL---QDPNLVSILGV-----   92 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~----~~~vavK~~~~~~~~e~~~l~~l---~h~niv~~~g~-----   92 (228)
                      .+.+..++|.+.+.||+|+||.||+|....   +    +..||+|.+......|+.....+   .+.++..+...     
T Consensus       126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~---~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~  202 (566)
T PLN03225        126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVN---KQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPV  202 (566)
T ss_pred             CCCCccCCeEEeEEEeeCCCeEEEEEEEcC---CccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhccc
Confidence            455567889999999999999999999875   4    78999998864333333322222   22233222221     


Q ss_pred             -eeCCCCCeEEEeeccccCCHHHHhh
Q psy796           93 -CTGEQPPWLVMEYPAQLGDLVQHLN  117 (228)
Q Consensus        93 -~~~~~~~~lv~e~~~~~g~L~~~l~  117 (228)
                       .......++++||+ ++++|.+++.
T Consensus       203 ~~~~~~~~~LV~ey~-~~gsL~~~l~  227 (566)
T PLN03225        203 SSKKEDEYWLVWRYE-GESTLADLMQ  227 (566)
T ss_pred             ccccCCceEEEEEec-CCCcHHHHHH
Confidence             12345689999999 9999987764

>KOG0695|consensus

Probab=99.74  E-value=1.8e-18  Score=137.72  Aligned_cols=173  Identities=15%  Similarity=0.262  Sum_probs=132.4

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH----------HHHHHHHHhhC-CCCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------SLREIRFLSSL-QDPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------~~~e~~~l~~l-~h~niv~~~g~   92 (228)
                      ..|.+.-.+|.+.++||.|++++|.++++.+   ..+.+|+|+++++          .+.|..++.+. +||.+|.++.+
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~---t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc  319 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKK---TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC  319 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcc---cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh
Confidence            3566677899999999999999999999987   7899999999754          35677777665 79999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      |+.++.+++|.||+ ++|+|--++.+.                             |||+                    
T Consensus       320 fqtesrlffvieyv-~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmc  398 (593)
T KOG0695|consen  320 FQTESRLFFVIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMC  398 (593)
T ss_pred             hcccceEEEEEEEe-cCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchh
Confidence            99999999999999 999996655544                             3333                    


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC--ChH--HHHHHHHHhhhCCCc
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL--TNE--QVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~--~~~--~~~~~~~~~~~~~~~  175 (228)
                                              +.+..|...+|.|++||+++||..  |..||+-.  .+.  +....+-+.....  
T Consensus       399 ke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemma--grspfdivgm~n~d~ntedylfqvilek--  474 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA--GRSPFDIVGMDNPDMNTEDYLFQVILEK--  474 (593)
T ss_pred             hcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHc--CCCCcceecCCCcccchhHHHHHHHhhh--
Confidence                                    567789999999999999999999  56888632  211  1111111111111  


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPT  206 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps  206 (228)
                        ....|...+.....++...+..||.+|..
T Consensus       475 --qiriprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  475 --QIRIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             --cccccceeehhhHHHHHHhhcCCcHHhcC
Confidence              23346677788889999999999999954

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.74  E-value=6.8e-17  Score=139.33  Aligned_cols=91  Identities=16%  Similarity=0.260  Sum_probs=65.7

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccC-------------CCceeEEeecch-------HHHH-------------
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIE-------------LDTEKVAVRTCR-------GDSL-------------   72 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~-------------~~~~~vavK~~~-------~~~~-------------   72 (228)
                      ..+..++|++.+.||+|+||.||+|......             ..++.||||.++       .+|.             
T Consensus       140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~  219 (507)
T PLN03224        140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG  219 (507)
T ss_pred             CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence            3457889999999999999999999752110             134679999974       2232             


Q ss_pred             -HHHHHHhhCCCCCc-----ceeeeeeeC--------CCCCeEEEeeccccCCHHHHhh
Q psy796           73 -REIRFLSSLQDPNL-----VSILGVCTG--------EQPPWLVMEYPAQLGDLVQHLN  117 (228)
Q Consensus        73 -~e~~~l~~l~h~ni-----v~~~g~~~~--------~~~~~lv~e~~~~~g~L~~~l~  117 (228)
                       .|+..+.+++|.++     +++++++..        ....++||||+ ++++|.++|+
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~-~~gsL~~~L~  277 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFE-SDATLGDALD  277 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcC-CCCcHHHHHh
Confidence             35666667766554     667777643        23579999999 9999988875

>KOG0666|consensus

Probab=99.74  E-value=1.6e-18  Score=136.46  Aligned_cols=179  Identities=20%  Similarity=0.322  Sum_probs=125.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCC-CceeEEeecchH---------HHHHHHHHHhhCCCCCcceeeeeeeC-CCCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCRG---------DSLREIRFLSSLQDPNLVSILGVCTG-EQPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~~---------~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~  100 (228)
                      .|+....||+|.+|.||++.-.+.+. -...+|+|.++.         .-.||+.+++.++|+||+.+..++.. +..++
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            46778899999999999996554321 134789999963         35799999999999999999999987 56789


Q ss_pred             EEEeeccccCCHHHHhhhC----------------------------------Cccc-----------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA----------------------------------DNLT-----------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~----------------------------------r~l~-----------------------  123 (228)
                      +++||. + -+|.+.++-+                                  |||+                       
T Consensus       105 l~fdYA-E-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  105 LLFDYA-E-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEehhh-h-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999997 6 7888887654                                  4555                       


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh---------HHHHHH
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN---------EQVIQN  165 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~---------~~~~~~  165 (228)
                                                   +...+||.+.|||+.||++.||++.  .+-|.+...         .+...+
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl--~PlF~g~E~k~~~~~Pfq~dQl~r  260 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL--EPLFKGREEKIKTKNPFQHDQLDR  260 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc--CccccchhhhcccCCCchHHHHHH
Confidence                                         4556899999999999999999995  344432211         112222


Q ss_pred             HHHhh--hCCCccccC---CC------------------------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          166 AEHMY--YGGELQVFL---PK------------------------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       166 ~~~~~--~~~~~~~~~---~~------------------------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      +....  ..+...+.+   |.                        ...-++...+|+.+++++||-.|-|+++.+++-
T Consensus       261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence            22211  111111000   00                        011233478999999999999999999988753

>KOG1027|consensus

Probab=99.70  E-value=8.4e-18  Score=146.64  Aligned_cols=162  Identities=20%  Similarity=0.248  Sum_probs=122.8

Q ss_pred             eeeeccccee-eEEEEEEeccCCCceeEEeecchHH----HHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeecccc
Q psy796           36 LERLGSCHLG-EMMICETEDIELDTEKVAVRTCRGD----SLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        36 ~~~ig~G~fg-~V~~~~~~~~~~~~~~vavK~~~~~----~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      .+++|.|+.| .||+|.+     .++.||||.+-.+    ..+|+++|..- .|+|||++++.-.+....||..|.| . 
T Consensus       514 ~eilG~Gs~Gt~Vf~G~y-----e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~-  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVY-----EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-A-  586 (903)
T ss_pred             HHHcccCCCCcEEEEEee-----CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-h-
Confidence            4688999997 5699999     7899999999644    47999999877 6999999999988888999999999 5 


Q ss_pred             CCHHHHhhhC---------------------------------Cccc---------------------------------
Q psy796          110 GDLVQHLNSA---------------------------------DNLT---------------------------------  123 (228)
Q Consensus       110 g~L~~~l~~~---------------------------------r~l~---------------------------------  123 (228)
                      .+|.+++...                                 |||+                                 
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence            8999998762                                 4444                                 


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         +....-+.++||||+||++|..++| |..||.+...  ...++..+...-.   .+.....
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg-G~HpFGd~~~--R~~NIl~~~~~L~---~L~~~~d  740 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG-GSHPFGDSLE--RQANILTGNYTLV---HLEPLPD  740 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecC-CccCCCchHH--hhhhhhcCcccee---eeccCch
Confidence                               3333456789999999999999998 4788864322  2233333321100   1111111


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                        .+.++||.+++..+|..||++.+|+.
T Consensus       741 --~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  741 --CEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             --HHHHHHHHHhcCCCcccCCCHHHHhC
Confidence              28999999999999999999999985

>KOG0669|consensus

Probab=99.70  E-value=3.1e-18  Score=131.49  Aligned_cols=186  Identities=19%  Similarity=0.264  Sum_probs=132.2

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC---
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE---   96 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~---   96 (228)
                      .-+.++-...||+|.||.||+++.+.   .++.||+|++-         ..-.+|+.+|..+.|+|++.+...|...   
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n---~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp   91 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKN---TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP   91 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcC---ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence            33455556789999999999998876   77889998872         3458999999999999999998877532   


Q ss_pred             -----CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------
Q psy796           97 -----QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------  123 (228)
Q Consensus        97 -----~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------  123 (228)
                           ..+++|+++| + .+|...|...                              ||++                  
T Consensus        92 ~~r~r~t~ylVf~~c-e-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   92 TNRDRATFYLVFDFC-E-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             cccccceeeeeHHHh-h-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccc
Confidence                 2479999999 6 5666655432                              3333                  


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     +....|+++.|||+-||++.||++  +.+-+.+.+..+....+......
T Consensus       170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt--rspimqgnteqqql~~Is~LcGs  247 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT--RSPIMQGNTEQQQLHLISQLCGS  247 (376)
T ss_pred             cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc--cCccccCChHHHHHHHHHHHhcc
Confidence                                           445578999999999999999999  66667776666655555443211


Q ss_pred             ---CCccc--------cC--C-CC-------------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          173 ---GELQV--------FL--P-KP-------------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       173 ---~~~~~--------~~--~-~~-------------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                         +.++.        .+  + .|             -.-.++..+|+.+++..||.+|+++++++.|-=..++..
T Consensus       248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence               11110        00  0 11             112347889999999999999999999998654444433

>KOG0671|consensus

Probab=99.69  E-value=1.7e-17  Score=133.69  Aligned_cols=177  Identities=20%  Similarity=0.255  Sum_probs=123.2

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCC-----C-cceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDP-----N-LVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~-----n-iv~~~g~~~~~~   97 (228)
                      ...+.+...+|+|.||+|-.+-.+.   .+..||+|+++      +--+-|++.|.++.+.     | ++.+.+.|.-.+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~---~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRE---TKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecC---CCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            3457778899999999999998765   57899999996      3356688888888321     1 356666666667


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+|++|.+  |-++++||..+                               -||+                       
T Consensus       165 hiCivfell--G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~  242 (415)
T KOG0671|consen  165 HICIVFELL--GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF  242 (415)
T ss_pred             ceEEEEecc--ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence            889999987  45999999875                               1111                       


Q ss_pred             --------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q psy796          124 --------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN  165 (228)
Q Consensus       124 --------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~  165 (228)
                                                            +.+-..++.+||||+||+|.|+++  |..-|...++.+-+..
T Consensus       243 ~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt--G~~LFqtHen~EHLaM  320 (415)
T KOG0671|consen  243 IRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT--GETLFQTHENLEHLAM  320 (415)
T ss_pred             eccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeec--cceecccCCcHHHHHH
Confidence                                                  334467899999999999999999  6677777665542222


Q ss_pred             HHHhhhC-----------------CCcc-----------c--cCCCC--------CCCcHHHHHHHHHhhccCCCCCCCH
Q psy796          166 AEHMYYG-----------------GELQ-----------V--FLPKP--------SLCPRDIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       166 ~~~~~~~-----------------~~~~-----------~--~~~~~--------~~~~~~l~~li~~c~~~~p~~Rps~  207 (228)
                      +......                 ++.+           .  ..+.|        .....++.+|+..++..||.+|+|+
T Consensus       321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl  400 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL  400 (415)
T ss_pred             HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence            2221110                 0000           0  00111        1122368899999999999999999


Q ss_pred             HHHHHH
Q psy796          208 KQIYSF  213 (228)
Q Consensus       208 ~~v~~~  213 (228)
                      .|.+.|
T Consensus       401 ~EAL~H  406 (415)
T KOG0671|consen  401 REALSH  406 (415)
T ss_pred             HHHhcC
Confidence            999864

>KOG0608|consensus

Probab=99.67  E-value=2.3e-16  Score=134.63  Aligned_cols=167  Identities=20%  Similarity=0.302  Sum_probs=128.1

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..+.+-|..++.||-|.||.|.+++-.+   ....+|+|.++          ...+.|-.||....++=||+|+-.|+++
T Consensus       625 KMdKSmFvkik~iGvGAFGeV~Lv~KvD---T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk  701 (1034)
T KOG0608|consen  625 KMDKSMFVKIKTIGVGAFGEVCLVRKVD---TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK  701 (1034)
T ss_pred             hccccceEEEeeecccccceeEEEeecc---hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC
Confidence            3455667788999999999999998765   66788999994          3357788999999999999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      .++|+||+|+ +||++-..|-+.                             |||+                        
T Consensus       702 dnLYFVMdYI-PGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR  780 (1034)
T KOG0608|consen  702 DNLYFVMDYI-PGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR  780 (1034)
T ss_pred             CceEEEEecc-CCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccce
Confidence            9999999999 999998876543                             4444                        


Q ss_pred             --------------------------------------------------------------cccCCCCCccchHHHHHH
Q psy796          124 --------------------------------------------------------------RDRDRYTCQSNVWSFAVT  141 (228)
Q Consensus       124 --------------------------------------------------------------~~~~~~~~~~Dv~s~Gv~  141 (228)
                                                                                    +....+++-+|.||.||+
T Consensus       781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi  860 (1034)
T KOG0608|consen  781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI  860 (1034)
T ss_pred             eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence                                                                          445578999999999999


Q ss_pred             HHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHH-hhccCCCCCC
Q psy796          142 LWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCD-CWKRDQTMRP  205 (228)
Q Consensus       142 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~-c~~~~p~~Rp  205 (228)
                      |+||+.  |.+||....+.+...++.....    ...++.-.+++.++.++|.+ |.  +++.|.
T Consensus       861 l~em~~--g~~pf~~~tp~~tq~kv~nw~~----~l~~~~~~~ls~e~~~li~kLc~--sad~RL  917 (1034)
T KOG0608|consen  861 LYEMLV--GQPPFLADTPGETQYKVINWRN----FLHIPYQGNLSKEALDLIQKLCC--SADSRL  917 (1034)
T ss_pred             HHHHhh--CCCCccCCCCCcceeeeeehhh----ccccccccccCHHHHHHHHHHhc--Chhhhh
Confidence            999999  6799988777654433322110    00344457789999998865 44  344553

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.66  E-value=1.9e-15  Score=115.38  Aligned_cols=131  Identities=31%  Similarity=0.561  Sum_probs=109.0

Q ss_pred             ecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccccC
Q psy796           39 LGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLG  110 (228)
Q Consensus        39 ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g  110 (228)
                      ||+|.+|.||++....   .+..+++|.+.        ..+.+|++.+..+.|++++++++++......++++|++ +++
T Consensus         1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~-~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC-EGG   76 (215)
T ss_pred             CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC-CCC
Confidence            6899999999999864   58899999984        34789999999999999999999998888899999999 889


Q ss_pred             CHHHHhhhC------------------------------Cccc-------------------------------------
Q psy796          111 DLVQHLNSA------------------------------DNLT-------------------------------------  123 (228)
Q Consensus       111 ~L~~~l~~~------------------------------r~l~-------------------------------------  123 (228)
                      +|.+++...                              ++++                                     
T Consensus        77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (215)
T cd00180          77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGT  156 (215)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCC
Confidence            999998642                              1111                                     


Q ss_pred             --------cccC-CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHH
Q psy796          124 --------RDRD-RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC  194 (228)
Q Consensus       124 --------~~~~-~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  194 (228)
                              .... ..+.++|+|++|+++++|                                         ..+.+++.
T Consensus       157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------~~~~~~l~  195 (215)
T cd00180         157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------PELKDLIR  195 (215)
T ss_pred             CCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------HHHHHHHH
Confidence                    0011 455779999999999987                                         56889999


Q ss_pred             HhhccCCCCCCCHHHHHHHH
Q psy796          195 DCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       195 ~c~~~~p~~Rps~~~v~~~l  214 (228)
                      .|++.+|.+||++.++++++
T Consensus       196 ~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         196 KMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHhhCCcccCcCHHHHhhCC
Confidence            99999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.60  E-value=2.8e-14  Score=110.67  Aligned_cols=129  Identities=30%  Similarity=0.498  Sum_probs=102.7

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      +.+.+.||+|++|.||++....   .+..+++|.+.        ..+.+|++.+..++|+|++++++.+......++++|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG---TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME   77 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC---CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence            4567899999999999998864   57899999884        356789999999999999999999988888999999


Q ss_pred             eccccCCHHHHhhhCCc-cc------------------------------------------------------------
Q psy796          105 YPAQLGDLVQHLNSADN-LT------------------------------------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~r~-l~------------------------------------------------------------  123 (228)
                      |+ ++++|.+++...+. +.                                                            
T Consensus        78 ~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~  156 (225)
T smart00221       78 YC-EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL  156 (225)
T ss_pred             cc-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence            99 88899998865321 11                                                            


Q ss_pred             --------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCC-CChH-HHHHHHH
Q psy796          124 --------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNE-QVIQNAE  167 (228)
Q Consensus       124 --------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~-~~~~-~~~~~~~  167 (228)
                                    . ....++.++|||+||++++||++  |..||.. .+.. .+.+.+.
T Consensus       157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW--GPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH--CCCCccccchhHHHHHHHHh
Confidence                          1 23445678999999999999999  6799977 4444 4444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0984|consensus

Probab=99.56  E-value=7e-15  Score=110.04  Aligned_cols=135  Identities=20%  Similarity=0.308  Sum_probs=105.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhh-CCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSS-LQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~-l~h~niv~~~g~~~~~   96 (228)
                      .+++.+++.-+..||+|++|.|-+-++..   ++...|+|.++        .+..+|+.+..+ ...|.+|.|+|...++
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~---sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re  117 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQ---SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE  117 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeecc---CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc
Confidence            78888888889999999999999888876   89999999995        445667776554 4799999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc-------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT-------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~-------------------  123 (228)
                      ..+++-||.+ . .+|+.|-..-                                  ||++                   
T Consensus       118 gdvwIcME~M-~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI  195 (282)
T KOG0984|consen  118 GDVWICMELM-D-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI  195 (282)
T ss_pred             ccEEEeHHHh-h-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence            9999999987 3 5555443211                                  4444                   


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHH
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAE  167 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~  167 (228)
                                                  .....|+-+|||||||+++.||.+  +..||+... +.+.+..+.
T Consensus       196 sG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~--lr~PY~~w~tpF~qLkqvV  266 (282)
T KOG0984|consen  196 SGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI--LRFPYESWGTPFQQLKQVV  266 (282)
T ss_pred             ceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh--ccccccccCCHHHHHHHHh
Confidence                                        444589999999999999999999  458888754 445555544

>KOG0670|consensus

Probab=99.54  E-value=4.5e-15  Score=124.21  Aligned_cols=174  Identities=20%  Similarity=0.238  Sum_probs=130.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC------CCCcceeeeeeeCCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ------DPNLVSILGVCTGEQP   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~------h~niv~~~g~~~~~~~   98 (228)
                      ..|.+....|+|-|+.|..|....   .+..||||+++      +.=++|+++|++|+      --|.++++..|.-.+.
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~---r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQA---RGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccC---CCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            456667788999999999998876   56799999995      33468999999984      3478888888877888


Q ss_pred             CeEEEeeccccCCHHHHhhhC--------------------------------Cccc-----------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT-----------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~-----------------------  123 (228)
                      ++||+|-. . -+|.+.|+.-                                .||+                       
T Consensus       509 LClVFE~L-s-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~  586 (752)
T KOG0670|consen  509 LCLVFEPL-S-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASF  586 (752)
T ss_pred             eEEEehhh-h-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccc
Confidence            99999976 4 6788877643                                1222                       


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC----
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL----  179 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----  179 (228)
                                          +.+-.|+...|+||.||+||||+|  |..-|++..+-+++...+....  ..+.++    
T Consensus       587 ~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYt--GkIlFpG~TNN~MLrl~me~KG--k~p~KmlRKg  662 (752)
T KOG0670|consen  587 ASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYT--GKILFPGRTNNQMLRLFMELKG--KFPNKMLRKG  662 (752)
T ss_pred             cccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeec--cceecCCCCcHHHHHHHHHhcC--CCcHHHhhhc
Confidence                                567789999999999999999999  6799999888777666554321  000000    


Q ss_pred             --------------------------------CCC-----------CCCc-------HHHHHHHHHhhccCCCCCCCHHH
Q psy796          180 --------------------------------PKP-----------SLCP-------RDIYDLMCDCWKRDQTMRPTFKQ  209 (228)
Q Consensus       180 --------------------------------~~~-----------~~~~-------~~l~~li~~c~~~~p~~Rps~~~  209 (228)
                                                      ..|           ..++       ..+++|+.+|+..||+.|.|..+
T Consensus       663 qF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nq  742 (752)
T KOG0670|consen  663 QFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQ  742 (752)
T ss_pred             chhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHH
Confidence                                            001           0011       35889999999999999999999


Q ss_pred             HHHH
Q psy796          210 IYSF  213 (228)
Q Consensus       210 v~~~  213 (228)
                      .+.|
T Consensus       743 AL~H  746 (752)
T KOG0670|consen  743 ALKH  746 (752)
T ss_pred             HhcC
Confidence            8764

>KOG0664|consensus

Probab=99.53  E-value=4.7e-15  Score=115.37  Aligned_cols=177  Identities=19%  Similarity=0.251  Sum_probs=123.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ----   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~----   97 (228)
                      .+++-.+.||-|.||.||.....+   +++.|+.|.+.         +.+.+|+.+|..++|.|++..++.-+..+    
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPR---dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfF  129 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPR---SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFF  129 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCC---CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHH
Confidence            456667899999999999998876   89999999983         66789999999999999999998876554    


Q ss_pred             -CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           98 -PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        98 -~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                       .+|+++|.+ . .+|...+...                             ||++                        
T Consensus       130 qEiYV~TELm-Q-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee  207 (449)
T KOG0664|consen  130 QELYVLTELM-Q-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWD  207 (449)
T ss_pred             HHHHHHHHHH-H-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccc
Confidence             245666665 3 5555443322                             4444                        


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh----------
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY----------  171 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~----------  171 (228)
                                            ....+|+.+.||||.||++.||+-  ++.-|...++.+..+.+.....          
T Consensus       208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg--RrILFQAq~PiqQL~lItdLLGTPs~EaMr~A  285 (449)
T KOG0664|consen  208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ--RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA  285 (449)
T ss_pred             hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh--hhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence                                  345579999999999999999998  6688887776654444433211          


Q ss_pred             ----------CCCccccCCC------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          172 ----------GGELQVFLPK------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       172 ----------~~~~~~~~~~------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                                +....+..+.      +..-..+...++.+++..||..|.+..+.+.++
T Consensus       286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence                      1111111110      111234566777888899999998887776543

>KOG1152|consensus

Probab=99.52  E-value=1.5e-14  Score=122.42  Aligned_cols=86  Identities=17%  Similarity=0.247  Sum_probs=74.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH-H--------------HHHHHHHHhhCC---CCCcceeeee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG-D--------------SLREIRFLSSLQ---DPNLVSILGV   92 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~-~--------------~~~e~~~l~~l~---h~niv~~~g~   92 (228)
                      ++|...+.+|+|+||.|.++.+++   +...|+||.+.+ +              +.-|+++|..++   |+||++++.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~---n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKE---NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             ccceeeeeccccccceEEEeeecc---cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            467888999999999999999987   788999998842 1              345999999996   9999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~  119 (228)
                      |+++++.||+||-.-++-+|++|+..+
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~k  664 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFK  664 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhcc
Confidence            999999999999875567799988755

>KOG0665|consensus

Probab=99.48  E-value=7.9e-14  Score=110.42  Aligned_cols=174  Identities=18%  Similarity=0.207  Sum_probs=120.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ-----   97 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----   97 (228)
                      +|.....+|.|.- .|..+...-   .+++|++|.+-         +.-.+|..++..++|+|+++++.++....     
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v---~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~   93 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQV---LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF   93 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhh---ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence            3555677888887 555554432   67899999883         44578999999999999999999997654     


Q ss_pred             -CCeEEEeeccccCCHHHHhhhC---------------------------Cccc--------------------------
Q psy796           98 -PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT--------------------------  123 (228)
Q Consensus        98 -~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~--------------------------  123 (228)
                       ..|++||++ . ++|...++-.                           |||+                          
T Consensus        94 ~e~y~v~e~m-~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen   94 QEVYLVMELM-D-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             HhHHHHHHhh-h-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence             579999998 5 7887765422                           5555                          


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh---------------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY---------------  171 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~---------------  171 (228)
                                       .-+-.+...+||||.||++.||++  +..-|.+...-+.+.++.....               
T Consensus       172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~--~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELIL--GTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhh--ceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence                             223348899999999999999999  5576766554443333322110               


Q ss_pred             ---CCCc--c-----ccCC---C------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 ---GGEL--Q-----VFLP---K------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ---~~~~--~-----~~~~---~------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         ....  .     ..++   +      +..-...+++++.+++--+|++|-|++++++|
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence               0000  0     0000   0      11123458899999999999999999999874

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.48  E-value=1.3e-13  Score=103.66  Aligned_cols=90  Identities=14%  Similarity=0.217  Sum_probs=61.4

Q ss_pred             ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-HHHHHHHHHhhhCCCccccCCCCCCCcH--HHHHHHHHhhccCC
Q psy796          125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKPSLCPR--DIYDLMCDCWKRDQ  201 (228)
Q Consensus       125 ~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~li~~c~~~~p  201 (228)
                      .+..++.++|||||||++|||++  +..||..... ......+.......... ..+.+...+.  ++.+++.+||..+|
T Consensus        77 ~~~~~~~~~DiwSlG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~cl~~~p  153 (176)
T smart00750       77 QGQSYTEKADIYSLGITLYEALD--YELPYNEERELSAILEILLNGMPADDPR-DRSNLESVSAARSFADFMRVCASRLP  153 (176)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHh--CCCCccccchhcHHHHHHHHHhccCCcc-ccccHHHHHhhhhHHHHHHHHHhccc
Confidence            35678899999999999999999  5688865433 23333332221111000 0011222333  69999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q psy796          202 TMRPTFKQIYSFMKRS  217 (228)
Q Consensus       202 ~~Rps~~~v~~~l~~~  217 (228)
                      .+||++.++++++..+
T Consensus       154 ~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      154 QRREAANHYLAHCRAL  169 (176)
T ss_pred             ccccCHHHHHHHHHHH
Confidence            9999999999998876

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1345|consensus

Probab=99.47  E-value=4.1e-14  Score=109.99  Aligned_cols=176  Identities=15%  Similarity=0.254  Sum_probs=120.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeee-eCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVC-TGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~-~~~~~~~lv  102 (228)
                      +.|.+.+.+|+|.||++.++.++.   ..+.+++|.+.      .+|.+|..----+ .|.||+.-+.+. +..+...++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~---s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQ---SKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccC---CceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            347778899999999999999987   78999999984      7788886543344 599999776654 444556799


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      +||+ |.|+|.+-+...                            |||+                               
T Consensus       101 qE~a-P~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  101 QEFA-PRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             eccC-ccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence            9999 999997744322                            5555                               


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-HHHHHHHhhhCCCccccCCCC-CC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-VIQNAEHMYYGGELQVFLPKP-SL  184 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~  184 (228)
                                       ...-...+.+|||.||++++-.++  |..||......+ -.........  +..++.|.. ..
T Consensus       180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt--G~~PWQka~~~d~~Y~~~~~w~~--rk~~~~P~~F~~  255 (378)
T KOG1345|consen  180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT--GKFPWQKASIMDKPYWEWEQWLK--RKNPALPKKFNP  255 (378)
T ss_pred             hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec--CCCcchhhhccCchHHHHHHHhc--ccCccCchhhcc
Confidence                             111234688999999999999999  569998544332 1222222211  111122221 23


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      .++.+..+..+-+..++++|--+.++....
T Consensus       256 fs~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  256 FSEKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             cCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence            577788888899999999996666655443

>KOG1023|consensus

Probab=99.44  E-value=4.9e-13  Score=113.61  Aligned_cols=138  Identities=21%  Similarity=0.378  Sum_probs=100.4

Q ss_pred             HhhCCCCCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-------------Cccc---------------------
Q psy796           78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-------------DNLT---------------------  123 (228)
Q Consensus        78 l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------r~l~---------------------  123 (228)
                      |+.+.|.|+.+++|.+.+....++|.+|| ..|+|.|.+...             ||+.                     
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c-~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYC-SRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeee-cCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            35678999999999999998899999999 999999988763             1111                     


Q ss_pred             --------------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCC
Q psy796          124 --------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKP  153 (228)
Q Consensus       124 --------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p  153 (228)
                                                                        ......++++||||||++++|+++  +..|
T Consensus        80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~--r~~~  157 (484)
T KOG1023|consen   80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF--RSGP  157 (484)
T ss_pred             ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh--ccCc
Confidence                                                              111236889999999999999999  6678


Q ss_pred             CCCCC----hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          154 FPHLT----NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       154 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      |....    ..++...+... .....++........++++..++.+||.++|.+||++.+|-..++.+..
T Consensus       158 ~~~~~~~~~~~eii~~~~~~-~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKKG-GSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             cccccccCChHHHHHHHHhc-CCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            86532    22444444431 1111111111112456689999999999999999999999999988843

>KOG1290|consensus

Probab=99.42  E-value=3.1e-12  Score=106.51  Aligned_cols=83  Identities=19%  Similarity=0.274  Sum_probs=66.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC--------CCCcceeeeeeeC-
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ--------DPNLVSILGVCTG-   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~--------h~niv~~~g~~~~-   95 (228)
                      .+|-+.+.||=|.|++||++-...   +.+.||+|+++      +.-..||.+|++++        -.+||+|++.|.- 
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq---~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQ---NKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeecc---CCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            467778999999999999998776   78999999996      44678999999883        2478999998853 


Q ss_pred             ---CCCCeEEEeeccccCCHHHHhhh
Q psy796           96 ---EQPPWLVMEYPAQLGDLVQHLNS  118 (228)
Q Consensus        96 ---~~~~~lv~e~~~~~g~L~~~l~~  118 (228)
                         ...+++|+|+.  |.+|..++..
T Consensus       155 GpNG~HVCMVfEvL--GdnLLklI~~  178 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVL--GDNLLKLIKY  178 (590)
T ss_pred             CCCCcEEEEEehhh--hhHHHHHHHH
Confidence               23679999986  5677666543

>KOG1167|consensus

Probab=99.40  E-value=4e-13  Score=109.75  Aligned_cols=88  Identities=15%  Similarity=0.257  Sum_probs=74.3

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      ...+..++.||+|.|+.||++.........+.||+|.+.     ..+.+|+++|..+ .+.||+++.+++..++.+.+|+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl  114 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL  114 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence            445777899999999999999887533356889999984     7789999999998 5999999999999999999999


Q ss_pred             eeccccCCHHHHhhh
Q psy796          104 EYPAQLGDLVQHLNS  118 (228)
Q Consensus       104 e~~~~~g~L~~~l~~  118 (228)
                      ||. +..+..+++..
T Consensus       115 p~~-~H~~f~~l~~~  128 (418)
T KOG1167|consen  115 PYF-EHDRFRDLYRS  128 (418)
T ss_pred             ccc-CccCHHHHHhc
Confidence            999 87887776543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.19  E-value=3.6e-11  Score=93.56  Aligned_cols=82  Identities=12%  Similarity=0.101  Sum_probs=65.8

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------H---H------HHHHHHHHhhCCCCCcceeeee
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------G---D------SLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~---~------~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      -..+|+..+++|.|+||.||+...     ++..+++|.++       .   .      +.+|+..+.++.|++|.....+
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            456789999999999999998644     45689999994       1   1      4688889999999999988877


Q ss_pred             eeCC--------CCCeEEEeeccccCCHHHHh
Q psy796           93 CTGE--------QPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        93 ~~~~--------~~~~lv~e~~~~~g~L~~~l  116 (228)
                      +...        ...+++|||+ +|.+|.++.
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi-~G~tL~~~~  134 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYI-EGVELNDMP  134 (232)
T ss_pred             eeecccccccccCCeEEEEEEE-CCccHHHhh
Confidence            5533        3578999999 988997753

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.17  E-value=2.7e-11  Score=111.19  Aligned_cols=75  Identities=15%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCH
Q psy796          128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF  207 (228)
Q Consensus       128 ~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~  207 (228)
                      .++.++|||||||++|||++  +.+|+....  .....+....       ..+.......+..+++.+||+.+|.+||++
T Consensus       191 ~~~~~sDVwSlGviL~ELl~--~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~  259 (793)
T PLN00181        191 SSNCASDVYRLGVLLFELFC--PVSSREEKS--RTMSSLRHRV-------LPPQILLNWPKEASFCLWLLHPEPSCRPSM  259 (793)
T ss_pred             CCCchhhhhhHHHHHHHHhh--CCCchhhHH--HHHHHHHHhh-------cChhhhhcCHHHHHHHHHhCCCChhhCcCh
Confidence            46889999999999999999  556654321  1111121110       111111223456788999999999999999


Q ss_pred             HHHHHH
Q psy796          208 KQIYSF  213 (228)
Q Consensus       208 ~~v~~~  213 (228)
                      .+++++
T Consensus       260 ~eil~h  265 (793)
T PLN00181        260 SELLQS  265 (793)
T ss_pred             HHHhhc
Confidence            999863

>KOG1240|consensus

Probab=99.07  E-value=5.3e-11  Score=107.74  Aligned_cols=166  Identities=16%  Similarity=0.194  Sum_probs=111.5

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHH---HHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSL---REIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~---~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++...+.||++.|=+|.+|+.+    +|. |+||.+-        ..+.   +|++ +...+|||.+.+.-.-..+.--|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~----eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAy   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR----EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAY   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC----Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHH
Confidence            5788899999999999999885    444 8888872        2233   3444 55668999998765544444557


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      |+-+|+ . .+|+|.|..+                             +|||                            
T Consensus        98 lvRqyv-k-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen   98 LVRQYV-K-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             HHHHHH-h-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence            888887 4 7888877544                             3444                            


Q ss_pred             ---------------------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHh
Q psy796          124 ---------------------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHM  169 (228)
Q Consensus       124 ---------------------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~  169 (228)
                                                       .+.+. .+++-||||+||++.||++- |.++|.   ..++.    .+
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E-g~PlF~---LSQL~----aY  247 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE-GRPLFT---LSQLL----AY  247 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc-CCCccc---HHHHH----hH
Confidence                                             22333 88999999999999999995 356663   11221    11


Q ss_pred             hhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          170 YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++...+......--+..+++++..|++.||..|.++++.++.
T Consensus       248 r~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  248 RSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             hccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            11111000000011123479999999999999999999999875

>KOG0603|consensus

Probab=99.03  E-value=8.6e-11  Score=100.80  Aligned_cols=155  Identities=18%  Similarity=0.269  Sum_probs=118.8

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEEeecc
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      ++|+|.||+|++.+.-...+.+..+++|.++         .....|..++..++ |+.+++++-.++.+...+++++|. 
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~-   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL-   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc-
Confidence            4799999999987654444466777888773         22345777788886 999999999999999999999999 


Q ss_pred             ccCCHHHHhhhC-----------------------------Cccc-----------------------------------
Q psy796          108 QLGDLVQHLNSA-----------------------------DNLT-----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~-----------------------------r~l~-----------------------------------  123 (228)
                      .+|.|...+...                             |+++                                   
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ey  159 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEY  159 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhh
Confidence            888987766543                             3332                                   


Q ss_pred             ---cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccC
Q psy796          124 ---RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRD  200 (228)
Q Consensus       124 ---~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  200 (228)
                         .-.+....++|.||||++++||++  |..||..    ++...+...        .+..|...+.++.+++...+..+
T Consensus       160 mApEI~~gh~~a~D~ws~gvl~fellt--g~~pf~~----~~~~~Il~~--------~~~~p~~l~~~a~~~~~~l~~r~  225 (612)
T KOG0603|consen  160 RAPEIINGHLSAADWWSFGVLAFELLT--GTLPFGG----DTMKRILKA--------ELEMPRELSAEARSLFRQLFKRN  225 (612)
T ss_pred             hhhHhhhccCCcccchhhhhhHHHHhh--CCCCCch----HHHHHHhhh--------ccCCchhhhHHHHHHHHHHHhhC
Confidence               111146789999999999999999  6789987    444444432        46678888999999999999999


Q ss_pred             CCCCCCH
Q psy796          201 QTMRPTF  207 (228)
Q Consensus       201 p~~Rps~  207 (228)
                      |.+|...
T Consensus       226 p~nrLg~  232 (612)
T KOG0603|consen  226 PENRLGA  232 (612)
T ss_pred             HHHHhcc
Confidence            9999554

>KOG1164|consensus

Probab=99.02  E-value=2.5e-08  Score=82.27  Aligned_cols=176  Identities=14%  Similarity=0.139  Sum_probs=126.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecchH-------HHHHHHHHHhhCCC----CCcceeeeeee-CCCCC
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG-------DSLREIRFLSSLQD----PNLVSILGVCT-GEQPP   99 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~-------~~~~e~~~l~~l~h----~niv~~~g~~~-~~~~~   99 (228)
                      .+.+.+.||+|+||.||.+.....  ....+|+|....       .+..|..++..+..    .++..+++... .+..-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~--~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSE--KNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCC--CCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            688999999999999999987642  145788887742       47789999988863    58888888884 56677


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      ++||+.+  |.+|.++....                               ||++                         
T Consensus        97 ~iVM~l~--G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   97 FIVMSLL--GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             EEEEecc--CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            9999986  68888866322                               3333                         


Q ss_pred             ----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHh
Q psy796          124 ----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHM  169 (228)
Q Consensus       124 ----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~  169 (228)
                                                        ..+...+++.|+||++-++.|++.  +..||...........+...
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~--g~LPW~~~~~~~~~~~~~~~  252 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLK--GSLPWEALEMTDLKSKFEKD  252 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhc--CCCCCccccccchHHHHHHH
Confidence                                              222334678999999999999999  55999776654333333222


Q ss_pred             hhCCCccccCC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          170 YYGGELQVFLP-KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       170 ~~~~~~~~~~~-~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....    ... .....+.++..+...+-..+..++|....+...|+..
T Consensus       253 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  253 PRKL----LTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             hhhh----ccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            1111    111 2334567888888888888999999999999998877

>KOG1163|consensus

Probab=99.00  E-value=5.3e-09  Score=80.63  Aligned_cols=179  Identities=15%  Similarity=0.122  Sum_probs=129.8

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCC-CCcceeeeeeeCCCCCe
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQD-PNLVSILGVCTGEQPPW  100 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h-~niv~~~g~~~~~~~~~  100 (228)
                      .|-...+.+++.||+|+||.+|.|..-.   .+..||||.-.     ..+..|..+...+++ ..|..+..+..+...-.
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~---~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGISIT---SGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             heeccceEEEEeecCCchhheeeeeecc---CCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence            3445668999999999999999998876   88999999885     447789999888864 45666666666677778


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      +||+..  |.+|.+...-.                              ||++                           
T Consensus        88 lVMdLL--GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   88 LVMDLL--GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             eeeecc--CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            999986  57887755321                              4555                           


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .-+..-+...|+=|+|-++...--  |..||.+..+..-.+........    
T Consensus       166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnr--G~LPWQglka~tk~QKyEkI~Ek----  239 (341)
T KOG1163|consen  166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNR--GSLPWQGLKAATKKQKYEKISEK----  239 (341)
T ss_pred             cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeec--CCCcccccchhhHHHHHHHHHHh----
Confidence                                       112234677899999999876555  67999998776444333222111    


Q ss_pred             ccCCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPK-----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~-----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       +...     -.+.|.|....+.-|=..--++-|...-+.+.+.-+
T Consensus       240 -K~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL  284 (341)
T KOG1163|consen  240 -KMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL  284 (341)
T ss_pred             -hcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence             1111     356788999999999999999999988877766665

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.94  E-value=6.3e-09  Score=86.69  Aligned_cols=79  Identities=18%  Similarity=0.009  Sum_probs=62.4

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcce-eeeeeeC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVS-ILGVCTG   95 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~-~~g~~~~   95 (228)
                      -...|.+.++||+|+||.||+|.+...  .+..||||.+.            ..+.+|+++|.+++|+|++. +++.   
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGD--PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCC--CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            345689999999999999999987532  35668998742            34789999999999999985 4432   


Q ss_pred             CCCCeEEEeeccccCCHHH
Q psy796           96 EQPPWLVMEYPAQLGDLVQ  114 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~  114 (228)
                       ...+++|||+ ++++|..
T Consensus        91 -~~~~LVmE~~-~G~~L~~  107 (365)
T PRK09188         91 -GKDGLVRGWT-EGVPLHL  107 (365)
T ss_pred             -CCcEEEEEcc-CCCCHHH
Confidence             3579999999 9888863

>KOG1165|consensus

Probab=98.86  E-value=4.6e-08  Score=78.71  Aligned_cols=192  Identities=11%  Similarity=0.075  Sum_probs=131.5

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhC-CCCCcceeeee
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSL-QDPNLVSILGV   92 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l-~h~niv~~~g~   92 (228)
                      .+...+...+---+|++++.||+|+||.++.|.---   ++..||||.-.     -.+..|-...+.+ ..++|..++-+
T Consensus        16 ~sss~s~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~---nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYF   92 (449)
T KOG1165|consen   16 GSSSSSGVLMVGPHYRVGKKIGEGSFGVLFLGKNLY---NNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYF   92 (449)
T ss_pred             CccCCCCceEecccceeccccccCcceeeecccccc---cCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeee
Confidence            333445666777789999999999999999997543   78999999773     4466787777777 46888888766


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhh---C---------------------------Cccc-------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNS---A---------------------------DNLT-------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~---~---------------------------r~l~-------------------  123 (228)
                      -...-.-.||+|..  |.+|.|...-   .                           ||++                   
T Consensus        93 GqeG~~NiLVidLL--GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ihi  170 (449)
T KOG1165|consen   93 GQEGKYNILVIDLL--GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHI  170 (449)
T ss_pred             ccccchhhhhhhhh--CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEE
Confidence            55555567999986  5777775421   1                           4444                   


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           ..+..-+...|.=|+|-++...+-  |..||.+.......++.
T Consensus       171 iDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLR--GsLPWQGLKA~tnK~kY  248 (449)
T KOG1165|consen  171 IDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR--GSLPWQGLKADTNKEKY  248 (449)
T ss_pred             EeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhcc--CCCccccccCcchHHHH
Confidence                                                 334445778999999999887666  78999998776544433


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...-...+.-+......++|+++..-+.--=..+-++-|..+-+...+..+
T Consensus       249 eKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv  299 (449)
T KOG1165|consen  249 EKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV  299 (449)
T ss_pred             HHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence            322111110001111345788888777666666778899988887766665

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.83  E-value=5.2e-07  Score=72.88  Aligned_cols=169  Identities=26%  Similarity=0.387  Sum_probs=121.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCC-CcceeeeeeeCCCCCeE
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDP-NLVSILGVCTGEQPPWL  101 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~-niv~~~g~~~~~~~~~l  101 (228)
                      +.+...||.|+||.||.+...      ..+++|.+.          ..+.+|+.++..+.|+ +++++.+.+......++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEE
Confidence            567889999999999999874      677777773          3478899999999988 79999999966666799


Q ss_pred             EEeeccccCCHHHHhhhC--------------------------------Cccc--------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA--------------------------------DNLT--------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~--------------------------------r~l~--------------------------  123 (228)
                      +++++ .++++.+++...                                ||++                          
T Consensus        76 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          76 VMEYV-DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             EEecC-CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence            99999 999998766531                                2222                          


Q ss_pred             -------------------------ccc---CCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh----HHHHHHHHHhhh
Q psy796          124 -------------------------RDR---DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN----EQVIQNAEHMYY  171 (228)
Q Consensus       124 -------------------------~~~---~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~----~~~~~~~~~~~~  171 (228)
                                               ...   ..++...|+||+|++++++++  +..||.....    ......+.....
T Consensus       155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~  232 (384)
T COG0515         155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLT--GLPPFEGEKNSSATSQTLKIILELPT  232 (384)
T ss_pred             CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCCccccHHHHHHHHHhcCC
Confidence                                     112   467789999999999999999  5677766653    344443433211


Q ss_pred             CCCccccCCCCCC----CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQVFLPKPSL----CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~~~~~~~~~----~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .   .........    ....+.+++..|+..+|..|.+..+....
T Consensus       233 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         233 P---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            1   000011111    12578999999999999999998876654

>PRK10345 hypothetical protein; Provisional

Probab=98.72  E-value=3.9e-08  Score=76.03  Aligned_cols=79  Identities=11%  Similarity=0.235  Sum_probs=60.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhC-----CCCCcceeeeeeeCCC---
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSL-----QDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l-----~h~niv~~~g~~~~~~---   97 (228)
                      +.-.+.||+|+||.||.  +..   .... +||++.       +.+.+|+.++..+     .|+||++++|++.++.   
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~---~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g   77 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPE---DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG   77 (210)
T ss_pred             cCCcceecCCCceEEEE--CCC---CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence            34457899999999995  322   3333 588763       4589999999999     5799999999998764   


Q ss_pred             CCe-EEEee--ccccCCHHHHhhh
Q psy796           98 PPW-LVMEY--PAQLGDLVQHLNS  118 (228)
Q Consensus        98 ~~~-lv~e~--~~~~g~L~~~l~~  118 (228)
                      .++ +|+||  + ++|+|.+++.+
T Consensus        78 ~v~~~I~e~~G~-~~~tL~~~l~~  100 (210)
T PRK10345         78 YVYDVIADFDGK-PSITLTEFAEQ  100 (210)
T ss_pred             EEEEEEecCCCC-cchhHHHHHHc
Confidence            333 78999  5 57999999964

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.59  E-value=2e-07  Score=71.94  Aligned_cols=76  Identities=17%  Similarity=0.104  Sum_probs=62.2

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.||+|++|.||+|.+     .+..|++|...               ..+.+|++++..+.|+++.....++...+..++
T Consensus         2 ~~l~~G~~~~vy~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l   76 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFII   76 (211)
T ss_pred             cccccCceEEEEEEee-----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEE
Confidence            5789999999999987     56778888642               346789999999999988766666666777899


Q ss_pred             EEeeccccCCHHHHhhh
Q psy796          102 VMEYPAQLGDLVQHLNS  118 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~  118 (228)
                      +|||+ ++++|.+++..
T Consensus        77 v~e~~-~G~~L~~~~~~   92 (211)
T PRK14879         77 VMEYI-EGEPLKDLINS   92 (211)
T ss_pred             EEEEe-CCcCHHHHHHh
Confidence            99999 99999988854

>KOG0590|consensus

Probab=98.57  E-value=8.8e-09  Score=91.21  Aligned_cols=175  Identities=21%  Similarity=0.249  Sum_probs=108.6

Q ss_pred             eeeeeecccceeeEEEEEEeccCC--CceeEEeecc-h--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           34 RVLERLGSCHLGEMMICETEDIEL--DTEKVAVRTC-R--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        34 ~~~~~ig~G~fg~V~~~~~~~~~~--~~~~vavK~~-~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ...+++|.|.+|.|+.........  ....+++| . .        ..+..|..+-..+.|+|++..+....+.....-.
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~  399 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS  399 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence            456789999999777766543111  11222332 1 1        1134455555677999988776666544333334


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||| ++ +|+.++.+.                             ||++                              
T Consensus       400 mE~~-~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  400 MEYC-PY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             hhcc-cH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence            9999 97 999888763                             3333                              


Q ss_pred             ------------------cccCCCC-CccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhhhCCCccccCCC--
Q psy796          124 ------------------RDRDRYT-CQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYGGELQVFLPK--  181 (228)
Q Consensus       124 ------------------~~~~~~~-~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--  181 (228)
                                        .....|. ...||||.|+++..|.+  ++.||.-....+.. .....    .........  
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~--~~~~Wk~a~~~~~~~~~~~~----~~~~~~~~~~~  551 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL--GRFPWKVAKKSDNSFKTNNY----SDQRNIFEGPN  551 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec--CCCccccccccccchhhhcc----ccccccccChH
Confidence                              2333444 56999999999999999  56888654333221 11110    000101111  


Q ss_pred             --CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          182 --PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       182 --~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                        ...++.+.+.++.++++.+|..|-|+++|++  .++.+
T Consensus       552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence              2336788999999999999999999999986  44444

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.54  E-value=4.2e-07  Score=73.14  Aligned_cols=64  Identities=19%  Similarity=0.292  Sum_probs=42.9

Q ss_pred             CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCC
Q psy796          127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMR  204 (228)
Q Consensus       127 ~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~R  204 (228)
                      ..++.+.|.|++|+++|.|++  +..||..........+            .+..-...|+.++.||..+++.+|++|
T Consensus       225 ~~~t~~~DaW~LG~~ly~lWC--~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  225 APYTFATDAWQLGITLYSLWC--GRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EEE-HHHHHHHHHHHHHHHHH--SS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             ceeeeccCHHHHHHHHHHHHH--ccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            357889999999999999999  6689876544321111            111222678999999999999999987

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.53  E-value=3.3e-07  Score=70.16  Aligned_cols=75  Identities=13%  Similarity=0.081  Sum_probs=57.9

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .||+|+||.||+|.+     .+..|++|...               ..+.+|++++..+.|+++.....++...+..+++
T Consensus         1 ~ig~G~~~~vy~~~~-----~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv   75 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-----LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIV   75 (199)
T ss_pred             CCCCCceEEEEEeec-----CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
Confidence            479999999999986     56788888742               3356799999999887655443444456667999


Q ss_pred             EeeccccCCHHHHhhh
Q psy796          103 MEYPAQLGDLVQHLNS  118 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~  118 (228)
                      |||+ ++++|.+++..
T Consensus        76 ~e~~-~g~~l~~~~~~   90 (199)
T TIGR03724        76 MEYI-EGKPLKDVIEE   90 (199)
T ss_pred             EEEE-CCccHHHHHhh
Confidence            9999 99999988754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG4158|consensus

Probab=98.51  E-value=2.7e-07  Score=76.12  Aligned_cols=76  Identities=21%  Similarity=0.319  Sum_probs=54.9

Q ss_pred             CccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy796          131 CQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI  210 (228)
Q Consensus       131 ~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v  210 (228)
                      .|+|-|+.|-+-||++.  ..-||.+..-..+..  .. +++..   .++.|..++..+++++-..++.+|.+|++..-.
T Consensus       436 ~kAD~WA~GalaYEIfg--~~NPFY~rGem~L~~--r~-Yqe~q---LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iA  507 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFG--RSNPFYKRGEMLLDT--RT-YQESQ---LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIA  507 (598)
T ss_pred             chhhhhhhhhhHHHHhc--cCCcccccchheech--hh-hhhhh---CCCCcccCChHHHHHHHHHhcCCccccCCccHH
Confidence            67999999999999998  567887643322211  11 11111   345688899999999999999999999987655


Q ss_pred             HHHH
Q psy796          211 YSFM  214 (228)
Q Consensus       211 ~~~l  214 (228)
                      ...|
T Consensus       508 ANvl  511 (598)
T KOG4158|consen  508 ANVL  511 (598)
T ss_pred             HhHH
Confidence            5443

>KOG1166|consensus

Probab=98.47  E-value=2e-06  Score=79.00  Aligned_cols=95  Identities=15%  Similarity=0.237  Sum_probs=66.6

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH----HHHHHHHHhhCC---CCCcceeeee
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----SLREIRFLSSLQ---DPNLVSILGV   92 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----~~~e~~~l~~l~---h~niv~~~g~   92 (228)
                      +.+....++....+.+.+.||+|+||.||.|...    +++.||+|.-+--    |---.+++.+|+   -+.|..+..+
T Consensus       687 l~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~----~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a  762 (974)
T KOG1166|consen  687 LNPNTEFEVGGEKFCISKEIGEGSYGSVYVATHS----NGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSA  762 (974)
T ss_pred             cCccceeeecceeEEEEeeeccccceEEEEeecC----CCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHH
Confidence            3344566777788888999999999999999987    6899999988511    100111222332   2345555555


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~  119 (228)
                      ..-.+-.+|++||. +.|+|.++++..
T Consensus       763 ~~~~~~S~lv~ey~-~~Gtlld~~N~~  788 (974)
T KOG1166|consen  763 HVFQNASVLVSEYS-PYGTLLDLINTN  788 (974)
T ss_pred             HccCCcceeeeecc-ccccHHHhhccC
Confidence            55556678999999 999999998755

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.44  E-value=9.8e-07  Score=77.82  Aligned_cols=77  Identities=17%  Similarity=0.116  Sum_probs=60.2

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecc---------------hHHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTC---------------RGDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~---------------~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      ..+.||+|+||.||+|.+..     ..+++|..               ...+.+|++++..++|++++....+....+..
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~~-----~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYLG-----RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             ccceeccCCcEEEEEEeecC-----ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            36899999999999998743     22332221               13467899999999999998877777676778


Q ss_pred             eEEEeeccccCCHHHHhh
Q psy796          100 WLVMEYPAQLGDLVQHLN  117 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~  117 (228)
                      +++|||+ ++++|.+++.
T Consensus       412 ~lv~E~~-~g~~L~~~l~  428 (535)
T PRK09605        412 TIVMEYI-GGKDLKDVLE  428 (535)
T ss_pred             EEEEEec-CCCcHHHHHH
Confidence            9999999 9999998874

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.38  E-value=4.8e-07  Score=68.99  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=52.0

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecchHH----------------H-----------------HHHHHHHhhCC
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----------------S-----------------LREIRFLSSLQ   82 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----------------~-----------------~~e~~~l~~l~   82 (228)
                      ...||+|+||.||+|...    +++.||+|+++..                |                 .+|++++.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05147           2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV   77 (190)
T ss_pred             CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999874    6899999998421                1                 23889999988


Q ss_pred             CCCcceeeeeeeCCCCCeEEEeeccccCCHHHH
Q psy796           83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH  115 (228)
Q Consensus        83 h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~  115 (228)
                      ++++........  ...+|+|||+ +++++...
T Consensus        78 ~~~v~~p~~~~~--~~~~iVmE~i-~g~~l~~~  107 (190)
T cd05147          78 TAGIPCPEPILL--KSHVLVMEFI-GDDGWAAP  107 (190)
T ss_pred             HCCCCCCcEEEe--cCCEEEEEEe-CCCCCcch
Confidence            777643222221  2238999999 87766544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.32  E-value=1.3e-06  Score=66.48  Aligned_cols=71  Identities=18%  Similarity=0.145  Sum_probs=52.3

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecchHH---------------------------------HHHHHHHHhhCC
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD---------------------------------SLREIRFLSSLQ   82 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~---------------------------------~~~e~~~l~~l~   82 (228)
                      ...||+|+||.||+|...    +++.||||+++..                                 +.+|.+.+.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05145           2 NGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY   77 (190)
T ss_pred             CceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999864    6899999987421                                 246888899998


Q ss_pred             CCCcceeeeeeeCCCCCeEEEeeccccCCHH
Q psy796           83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLV  113 (228)
Q Consensus        83 h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~  113 (228)
                      |+++.....+...  ..+++|||+ +++++.
T Consensus        78 ~~~i~~p~~~~~~--~~~lVmE~~-~g~~~~  105 (190)
T cd05145          78 EAGVPVPEPILLK--KNVLVMEFI-GDDGSP  105 (190)
T ss_pred             hCCCCCceEEEec--CCEEEEEEe-cCCCch
Confidence            8887543333322  248999999 877543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1266|consensus

Probab=98.25  E-value=3.6e-07  Score=73.64  Aligned_cols=126  Identities=19%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             HHHhhCCCCCcceeeeeeeCC-----CCCeEEEeeccccCCHHHHhhhCCccc---------------------------
Q psy796           76 RFLSSLQDPNLVSILGVCTGE-----QPPWLVMEYPAQLGDLVQHLNSADNLT---------------------------  123 (228)
Q Consensus        76 ~~l~~l~h~niv~~~g~~~~~-----~~~~lv~e~~~~~g~L~~~l~~~r~l~---------------------------  123 (228)
                      ..|.++.|.||++++.++.+.     ....+++||+ .-|++..||++.+.-.                           
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteym-ssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYM-SSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecc-cchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            344566799999999988653     3578999999 8899999997641000                           


Q ss_pred             --------------------------------------------------------cccCCCCCccchHHHHHHHHHHHh
Q psy796          124 --------------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILS  147 (228)
Q Consensus       124 --------------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~  147 (228)
                                                                              -.....+-++|||+||+..+||..
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence                                                                    111134577999999999999988


Q ss_pred             cCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          148 LCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       148 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      +. -.|-.+.+.......+.+....           .-...=++++.+|++.+|..||++++++.|.
T Consensus       278 lE-iq~tnseS~~~~ee~ia~~i~~-----------len~lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  278 LE-IQSTNSESKVEVEENIANVIIG-----------LENGLQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             he-eccCCCcceeehhhhhhhheee-----------ccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence            53 3444444433333333322110           0011224567889999999999999988753

>KOG0606|consensus

Probab=98.18  E-value=4.6e-06  Score=76.29  Aligned_cols=76  Identities=18%  Similarity=0.233  Sum_probs=59.3

Q ss_pred             cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCC
Q psy796          124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTM  203 (228)
Q Consensus       124 ~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~  203 (228)
                      .....|..-+|.|++|+++||-+.  +..||.+..+.+++..+......     -+......+.|+++++.+.++.+|.+
T Consensus       230 ilrqgygkpvdwwamGiIlyeFLV--gcvpffGdtpeelfg~visd~i~-----wpE~dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMGIILYEFLV--GCVPFFGDTPEELFGQVISDDIE-----WPEEDEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             hhhhccCCCccHHHHHHHHHHHhe--eeeeccCCCHHHHHhhhhhhhcc-----ccccCcCCCHHHHHHHHHHHHhChHh
Confidence            455678999999999999999999  55899999888888776543211     12224456789999999999999999


Q ss_pred             CCC
Q psy796          204 RPT  206 (228)
Q Consensus       204 Rps  206 (228)
                      |..
T Consensus       303 Rlg  305 (1205)
T KOG0606|consen  303 RLG  305 (1205)
T ss_pred             hcc
Confidence            943

>KOG1033|consensus

Probab=98.10  E-value=2.2e-06  Score=72.79  Aligned_cols=75  Identities=13%  Similarity=0.239  Sum_probs=47.7

Q ss_pred             cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC--CCCCCcHHHHHHHHHhhccCC
Q psy796          124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP--KPSLCPRDIYDLMCDCWKRDQ  201 (228)
Q Consensus       124 ~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~c~~~~p  201 (228)
                      +.++.|+.|+||||||++++|+++.- ..++..   ......+..+        .++  ..... ++-++++++++...|
T Consensus       434 i~g~~y~~kvdIyaLGlil~EL~~~f-~T~~er---~~t~~d~r~g--------~ip~~~~~d~-p~e~~ll~~lls~~p  500 (516)
T KOG1033|consen  434 IRGQQYSEKVDIYALGLILAELLIQF-STQFER---IATLTDIRDG--------IIPPEFLQDY-PEEYTLLQQLLSPSP  500 (516)
T ss_pred             HhhhhhhhhcchhhHHHHHHHHHHHh-ccHHHH---HHhhhhhhcC--------CCChHHhhcC-cHHHHHHHHhcCCCc
Confidence            66778999999999999999999832 122211   1222223222        112  11222 345789999999999


Q ss_pred             CCCCCHHHHH
Q psy796          202 TMRPTFKQIY  211 (228)
Q Consensus       202 ~~Rps~~~v~  211 (228)
                      .+||++.++.
T Consensus       501 ~~RP~~~~~~  510 (516)
T KOG1033|consen  501 EERPSAIEVA  510 (516)
T ss_pred             ccCchHHHHh
Confidence            9999555443

>smart00090 RIO RIO-like kinase

Probab=98.02  E-value=6.5e-06  Score=64.96  Aligned_cols=77  Identities=16%  Similarity=0.089  Sum_probs=56.0

Q ss_pred             CceeeeeecccceeeEEEEE-EeccCCCceeEEeecchH-------------------------------HHHHHHHHHh
Q psy796           32 CLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRG-------------------------------DSLREIRFLS   79 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~-~~~~~~~~~~vavK~~~~-------------------------------~~~~e~~~l~   79 (228)
                      -+.+.+.||+|+||.||+|. ...   +++.||+|.++.                               .+.+|++++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~---~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~  105 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDG---SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ  105 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCC---CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            45678899999999999997 333   789999998741                               1357999999


Q ss_pred             hCCCCC--cceeeeeeeCCCCCeEEEeeccccCCHHHHh
Q psy796           80 SLQDPN--LVSILGVCTGEQPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        80 ~l~h~n--iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l  116 (228)
                      ++.+.+  +.++++.    ...++||||+ ++++|..+.
T Consensus       106 ~L~~~~i~~p~~~~~----~~~~lV~E~~-~g~~L~~~~  139 (237)
T smart00090      106 RLYEAGVPVPKPIAW----RRNVLVMEFI-GGDGLPAPR  139 (237)
T ss_pred             HHHhcCCCCCeeeEe----cCceEEEEEe-cCCcccccc
Confidence            887533  3344432    2358999999 877776553

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.93  E-value=2.3e-05  Score=60.00  Aligned_cols=75  Identities=17%  Similarity=0.161  Sum_probs=55.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------------------------HHHHHHHHHHhhCCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------------------GDSLREIRFLSSLQD   83 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------------------~~~~~e~~~l~~l~h   83 (228)
                      +.+.+.||+|+||.||++...    +++.||||.++                             ....+|..++..+.|
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence            556788999999999999774    68899999642                             124678888888877


Q ss_pred             CC--cceeeeeeeCCCCCeEEEeeccccCCHHHHh
Q psy796           84 PN--LVSILGVCTGEQPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        84 ~n--iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l  116 (228)
                      .+  +...++    ....+++|||+ ++++|....
T Consensus        93 ~~i~v~~~~~----~~~~~lv~e~~-~g~~L~~~~  122 (198)
T cd05144          93 EGFPVPKPID----WNRHAVVMEYI-DGVELYRVR  122 (198)
T ss_pred             cCCCCCceee----cCCceEEEEEe-CCcchhhcc
Confidence            64  444443    24568999999 988887553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.87  E-value=2.4e-05  Score=56.28  Aligned_cols=72  Identities=18%  Similarity=0.212  Sum_probs=60.1

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCC--CCcceeeeeeeCCCCCeEEEeeccc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQD--PNLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h--~niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      .+.||+|.++.||++..     .+..+++|...     ..+.+|+..+..+.|  .++.++++.....+..+++|||+ +
T Consensus         3 ~~~i~~g~~~~v~~~~~-----~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~-~   76 (155)
T cd05120           3 IKLLKGGLTNRVYLLGT-----KDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI-E   76 (155)
T ss_pred             ceecccccccceEEEEe-----cCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec-C
Confidence            46789999999999987     44789999884     258899999999976  58889988887777889999999 8


Q ss_pred             cCCHH
Q psy796          109 LGDLV  113 (228)
Q Consensus       109 ~g~L~  113 (228)
                      ++.+.
T Consensus        77 g~~~~   81 (155)
T cd05120          77 GETLD   81 (155)
T ss_pred             Ceecc
Confidence            76665

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.79  E-value=0.00012  Score=56.43  Aligned_cols=73  Identities=22%  Similarity=0.150  Sum_probs=56.7

Q ss_pred             eeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeE
Q psy796           34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        34 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~l  101 (228)
                      ....+|++|+||+|+.+.-     .+.+++.+.+.           ..+.+|+++|+++. |+++.+++++    +..++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~l   75 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHL   75 (218)
T ss_pred             ccceeecCCCcceEEEeec-----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEE
Confidence            4567899999999996543     67788866663           14689999999995 5889998875    34689


Q ss_pred             EEeeccccCCHHHHh
Q psy796          102 VMEYPAQLGDLVQHL  116 (228)
Q Consensus       102 v~e~~~~~g~L~~~l  116 (228)
                      +|||+ .|.+|...+
T Consensus        76 vmeyI-~G~~L~~~~   89 (218)
T PRK12274         76 DRSYL-AGAAMYQRP   89 (218)
T ss_pred             EEeee-cCccHHhhh
Confidence            99999 888887543

>KOG1093|consensus

Probab=97.75  E-value=0.00011  Score=63.22  Aligned_cols=136  Identities=21%  Similarity=0.248  Sum_probs=86.1

Q ss_pred             HHHHHHHHhhCCCCCcceeeeeeeCC-CCCeEEEeeccccCCHHHHhhhCCccc-----------------------ccc
Q psy796           71 SLREIRFLSSLQDPNLVSILGVCTGE-QPPWLVMEYPAQLGDLVQHLNSADNLT-----------------------RDR  126 (228)
Q Consensus        71 ~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~lv~e~~~~~g~L~~~l~~~r~l~-----------------------~~~  126 (228)
                      +....+.++.+.|+|+..++.+.... ....+|+|++  +-+|.+++..+. ++                       ...
T Consensus        29 ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~--~~Sled~~~~~~-l~~~s~~~~~~~~~~~~~~td~~~t~~~  105 (725)
T KOG1093|consen   29 ILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY--TMSLEDILKTGN-LKDESLLAHGVLHLNIIYITDHFLTKYP  105 (725)
T ss_pred             HhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh--ccchHHHHHhcc-cchhhhcccccceehhhhccccccccCC
Confidence            34556678888999999998887654 3678999997  489999887653 33                       112


Q ss_pred             CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC----CCCCCCcHHHHHHHHHhhccCCC
Q psy796          127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL----PKPSLCPRDIYDLMCDCWKRDQT  202 (228)
Q Consensus       127 ~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~c~~~~p~  202 (228)
                      ....+|+||||+|.++.|+.-  +..-+......+....+......+......    ..--.+++....+...|....|.
T Consensus       106 ~~~~pKsdVwsl~~i~~el~L--~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~  183 (725)
T KOG1093|consen  106 SPIGPKSDVWSLGFIILELYL--GISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPI  183 (725)
T ss_pred             CCCCcchhhhhHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccc
Confidence            233479999999999999988  444454444444444443332111000000    00012455667778889999988


Q ss_pred             CCCCHHHHH
Q psy796          203 MRPTFKQIY  211 (228)
Q Consensus       203 ~Rps~~~v~  211 (228)
                      .||...++.
T Consensus       184 ir~l~~~~~  192 (725)
T KOG1093|consen  184 IRPLPMELS  192 (725)
T ss_pred             cccchhHHh
Confidence            887655543

>KOG0590|consensus

Probab=97.64  E-value=1e-05  Score=71.96  Aligned_cols=174  Identities=12%  Similarity=0.181  Sum_probs=118.6

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~   98 (228)
                      +...+.+.+.||+|.|+.|-.......  ....+|+|.+.         .....|..+-..+. |.|++++++.....+.
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~--~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRD--PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS   95 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCC--CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcc
Confidence            455677788899999999987755321  44566777662         22334555555565 9999999999988888


Q ss_pred             CeEEEeeccccCCHHHHh-hhC-------------------------------Cccc-----------------------
Q psy796           99 PWLVMEYPAQLGDLVQHL-NSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l-~~~-------------------------------r~l~-----------------------  123 (228)
                      .+++++|. .++++.+.+ +..                               ++++                       
T Consensus        96 ~~~~~~~s-~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~  174 (601)
T KOG0590|consen   96 YLLSLSYS-DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATA  174 (601)
T ss_pred             cccccCcc-cccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence            89999997 888888776 322                               1111                       


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH--HHHHHHhhhCCC
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV--IQNAEHMYYGGE  174 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~  174 (228)
                                                 ...+...+..|+||.|+++.-+++  +..|+......+.  ..+...     .
T Consensus       175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~-----~  247 (601)
T KOG0590|consen  175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT--GELPWDFPSRKDGRYSSWKSN-----K  247 (601)
T ss_pred             ccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccccc--CCCCccccccccccceeeccc-----c
Confidence                                       111234677999999999999999  6677754433321  111111     0


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ...........+....+++.+++..+|..|.+.+++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  248 GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            00023345667788999999999999999999988754

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.53  E-value=0.00018  Score=63.16  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecchH-------------------------------------------
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG-------------------------------------------   69 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~-------------------------------------------   69 (228)
                      |+. +.||+|++|.||.|++++   +++.||||+++.                                           
T Consensus       122 fd~-~PlasaSiaQVh~A~l~~---~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        122 FDI-KPLASASIAQVHFARLKD---NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             cCh-hhhcCCCccEEEEEEECC---CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            444 689999999999999974   589999998841                                           


Q ss_pred             ----HHHHHHHHHhhC----CCCCcceeeeeeeC-CCCCeEEEeeccccCCHHHH
Q psy796           70 ----DSLREIRFLSSL----QDPNLVSILGVCTG-EQPPWLVMEYPAQLGDLVQH  115 (228)
Q Consensus        70 ----~~~~e~~~l~~l----~h~niv~~~g~~~~-~~~~~lv~e~~~~~g~L~~~  115 (228)
                          ++.+|+..+.++    .+.+.+.+-.++.+ .+..+|+|||+ .|+.+.++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i-~G~~l~d~  251 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERM-YGIPVSDV  251 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeee-cCccHHhH
Confidence                123444444444    24444444444433 34568999999 99999764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.52  E-value=0.00017  Score=62.00  Aligned_cols=76  Identities=22%  Similarity=0.160  Sum_probs=51.5

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----H-------------------------------------------
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----G-------------------------------------------   69 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~-------------------------------------------   69 (228)
                      +.||+|++|.||+|++.    +|+.||||+.+    +                                           
T Consensus       123 ~plasaSigQVh~A~l~----~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV----DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             cceeeeehhheEEEEec----CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            57999999999999986    68999999983    1                                           


Q ss_pred             HHHHHHHHHhhC----CCCCcceeeeeeeC-CCCCeEEEeeccccCCHHHHhh
Q psy796           70 DSLREIRFLSSL----QDPNLVSILGVCTG-EQPPWLVMEYPAQLGDLVQHLN  117 (228)
Q Consensus        70 ~~~~e~~~l~~l----~h~niv~~~g~~~~-~~~~~lv~e~~~~~g~L~~~l~  117 (228)
                      ++.+|++.+.++    .|.+-+.+-.++.. .+..+|+|||+ +|++|.++..
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i-~G~~L~~~~~  250 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWI-DGIPLSDIAA  250 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeE-CCcccccHHH
Confidence            133455544444    23333443333322 33568999999 9999887653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243|consensus

Probab=97.39  E-value=0.00093  Score=58.98  Aligned_cols=57  Identities=28%  Similarity=0.334  Sum_probs=41.9

Q ss_pred             CceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeeccccCCHHHHhh
Q psy796           58 DTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLN  117 (228)
Q Consensus        58 ~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~  117 (228)
                      .+..|.|...+       .-..+.++.|+.++||||++++.....+...|||+|-+   ..|..++.
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV---~Pl~~~lk   99 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV---RPLETVLK   99 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc---ccHHHHHH
Confidence            44555555542       22456778899999999999999998888899999987   44544443

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.34  E-value=0.00051  Score=51.77  Aligned_cols=29  Identities=24%  Similarity=0.312  Sum_probs=24.6

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR   68 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~   68 (228)
                      .+.||+|+||.||++...    ++..||||.++
T Consensus         2 ~~~lg~G~~g~Vy~a~~~----~~~~vavKv~~   30 (187)
T cd05119           2 GGPIGTGKEADVYLALDG----DGEPVAVKIYR   30 (187)
T ss_pred             CcccccccceeEEEEECC----CCCEEEEEEEe
Confidence            467999999999999764    57899999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601|consensus

Probab=97.24  E-value=0.00028  Score=61.13  Aligned_cols=171  Identities=15%  Similarity=0.111  Sum_probs=111.9

Q ss_pred             CCCceeeeeecc--cceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGS--CHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~--G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~   97 (228)
                      ...+.....+|+  |.+|.+|.+.... ......+|+|.-+         ..-.+|...-..+ .|+|.++.+..+....
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~-~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~  191 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTN-SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG  191 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCc-ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence            344455678899  9999999988722 1167888888753         3345677666677 4999999888888888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------Cccc------------------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------DNLT------------------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------r~l~------------------------------------  123 (228)
                      ..++-+|+| . .+|..+.+..                  |+..                                    
T Consensus       192 ~lfiqtE~~-~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~  269 (524)
T KOG0601|consen  192 ILFIQTELC-G-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGL  269 (524)
T ss_pred             cceeeeccc-c-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcce
Confidence            899999997 4 6776665433                  0000                                    


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                   ..+..++.++|+|++|.++.+..++- ..|-.+.+.  .+..+..++.   
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~-~~~~~g~~~--~W~~~r~~~i---  343 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS-HLPSVGKNS--SWSQLRQGYI---  343 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc-ccccCCCCC--CccccccccC---
Confidence                                         44556789999999999999988741 222222111  1111111110   


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                         ....-..-+.++...+.+++..++.-|++.+.+..
T Consensus       344 ---p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  344 ---PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ---chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence               11122233456666889999999999998877654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.14  E-value=0.00065  Score=50.70  Aligned_cols=78  Identities=21%  Similarity=0.200  Sum_probs=59.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcc-eeeeeeeCCCCCeEEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLV-SILGVCTGEQPPWLVM  103 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv-~~~g~~~~~~~~~lv~  103 (228)
                      ...+...+.||+|.+|.||+|.|     .+..+|+|.-+     ..+..|+++|..+...++. +++.+.    ..++.|
T Consensus        21 ~~~~~v~~~L~KG~~s~Vyl~~~-----~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~m   91 (201)
T COG2112          21 KYELRVEKELAKGTTSVVYLGEW-----RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRM   91 (201)
T ss_pred             chhhhhhhhhhcccccEEEEeec-----cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhh
Confidence            34455667999999999999999     56799999885     6689999999999877765 555443    234569


Q ss_pred             eeccccCCHHHHhh
Q psy796          104 EYPAQLGDLVQHLN  117 (228)
Q Consensus       104 e~~~~~g~L~~~l~  117 (228)
                      ||+ .|-+|.+.-.
T Consensus        92 e~i-~G~~L~~~~~  104 (201)
T COG2112          92 EYI-DGRPLGKLEI  104 (201)
T ss_pred             hhh-cCcchhhhhh
Confidence            999 8778776544

>KOG0606|consensus

Probab=96.95  E-value=0.00075  Score=62.41  Aligned_cols=172  Identities=18%  Similarity=0.168  Sum_probs=114.5

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +....+.+.+.+-+-+|.|+.++...-..   .+...++|...          +....+-.++...+||-++...--+..
T Consensus       799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~---sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~  875 (1205)
T KOG0606|consen  799 YRSSPDGFEITKPSQSGSPSSSFPASPAG---SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC  875 (1205)
T ss_pred             ccCCCccceecccccCCCCcccccCCccc---cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC
Confidence            55667778888888899999998876543   33333333331          111222222233345666655444445


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      .++..|+++|. .+++|...|+.-                             ++++                       
T Consensus       876 rsP~~L~~~~~-~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  876 RSPLPLVGHYL-NGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             CCCcchhhHHh-ccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccc
Confidence            67889999998 888888876643                             0111                       


Q ss_pred             ----------------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCC
Q psy796          124 ----------------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRD  151 (228)
Q Consensus       124 ----------------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~  151 (228)
                                                                          ..+......+|.|++|++++|.++  |.
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~--g~ 1032 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLT--GI 1032 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhc--CC
Confidence                                                                333455778999999999999999  77


Q ss_pred             CCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy796          152 KPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFK  208 (228)
Q Consensus       152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~  208 (228)
                      +||......+.+..+......     -...+...+.+..+++...+..++..|..+.
T Consensus      1033 pp~na~tpq~~f~ni~~~~~~-----~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQQIFENILNRDIP-----WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCCCcchhhhhhccccCCCC-----CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            999998888888776543210     1112344677899999999999999996654

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.93  E-value=0.0044  Score=48.96  Aligned_cols=76  Identities=20%  Similarity=0.224  Sum_probs=54.3

Q ss_pred             eeec-ccceeeEEEEEEeccCCCceeEEeecch--------------------HHHHHHHHHHhhCCCCCc--ceeeeee
Q psy796           37 ERLG-SCHLGEMMICETEDIELDTEKVAVRTCR--------------------GDSLREIRFLSSLQDPNL--VSILGVC   93 (228)
Q Consensus        37 ~~ig-~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------------~~~~~e~~~l~~l~h~ni--v~~~g~~   93 (228)
                      .+|| .|+.|.||....     .+..+++|.++                    ..+.+|++++..+.|+++  ...+++.
T Consensus        37 ~~lg~~~g~gtv~~v~~-----~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT-----PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEe-----CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence            5677 888888888776     45677777552                    235779999999988775  5666664


Q ss_pred             eCCC----CCeEEEeecccc-CCHHHHhhh
Q psy796           94 TGEQ----PPWLVMEYPAQL-GDLVQHLNS  118 (228)
Q Consensus        94 ~~~~----~~~lv~e~~~~~-g~L~~~l~~  118 (228)
                      ....    ..+++||++ ++ .+|.+++..
T Consensus       112 ~~~~~~~~~~~lV~e~l-~G~~~L~~~l~~  140 (239)
T PRK01723        112 VVRHGLFYRADILIERI-EGARDLVALLQE  140 (239)
T ss_pred             eeecCcceeeeEEEEec-CCCCCHHHHHhc
Confidence            3322    235999999 86 689888753

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.53  E-value=0.0056  Score=47.15  Aligned_cols=75  Identities=21%  Similarity=0.309  Sum_probs=56.7

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCC--CcceeeeeeeCCC---CCeEEE
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDP--NLVSILGVCTGEQ---PPWLVM  103 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~--niv~~~g~~~~~~---~~~lv~  103 (228)
                      +.|+.|..+.||+....    ++..+++|...        ..+.+|.+++..+.+.  ++.+++.+.....   ..+++|
T Consensus         4 ~~l~~G~~n~~~~v~~~----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEec----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence            56899999999998774    35789999874        3578899999998654  4567777665432   568999


Q ss_pred             eeccccCCHHHHh
Q psy796          104 EYPAQLGDLVQHL  116 (228)
Q Consensus       104 e~~~~~g~L~~~l  116 (228)
                      ||+ +++++.+.+
T Consensus        80 e~i-~G~~l~~~~   91 (223)
T cd05154          80 ERV-DGRVLRDRL   91 (223)
T ss_pred             EEe-CCEecCCCC
Confidence            999 887777543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.45  E-value=0.0084  Score=44.21  Aligned_cols=70  Identities=13%  Similarity=0.069  Sum_probs=51.9

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCc-ceeeeeeeCCCCCeEEEeeccc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNL-VSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~ni-v~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ++.++.|.++.||+...     .+..+++|...      ..+.+|+..+..+.+.++ .++++..  ....+++|||+ +
T Consensus         3 ~~~l~~G~~~~vy~~~~-----~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i-~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV-----ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFI-E   74 (170)
T ss_pred             eeecCCcccCceEEEEE-----CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEec-C
Confidence            35679999999999876     56789999874      236789999988865454 3555543  33458999999 8


Q ss_pred             cCCHH
Q psy796          109 LGDLV  113 (228)
Q Consensus       109 ~g~L~  113 (228)
                      +.++.
T Consensus        75 G~~l~   79 (170)
T cd05151          75 GSELL   79 (170)
T ss_pred             CCccc
Confidence            77765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601|consensus

Probab=95.97  E-value=0.0091  Score=51.96  Aligned_cols=174  Identities=9%  Similarity=0.020  Sum_probs=115.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH---------HHHHHHHHhhC-CCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD---------SLREIRFLSSL-QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~---------~~~e~~~l~~l-~h~niv~~~g~~~~~~   97 (228)
                      ...-++..+..||.|.|+.|+....+..  ++..+++|.+.+.         -..|+.+...+ .|.+++++...+....
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~--~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPE--GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCC--CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            3445677789999999999999875422  6788999988522         24566655555 5889998888887777


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      +.++=.||| .++++.......                             .|++                         
T Consensus       340 ~~~ip~e~~-~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~  418 (524)
T KOG0601|consen  340 QGYIPLEFC-EGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA  418 (524)
T ss_pred             cccCchhhh-cCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence            788999999 878775543211                             1111                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....+..+.|++|||..+.|.+++. ..+..+.    .+..+..+        ..+-...
T Consensus       419 ~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~-~ls~~~~----~~~~i~~~--------~~p~~~~  485 (524)
T KOG0601|consen  419 FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGS-PLSESGV----QSLTIRSG--------DTPNLPG  485 (524)
T ss_pred             eecccccccccccccchhhccccccccccccccccccccccccCc-ccCcccc----cceeeecc--------cccCCCc
Confidence                               22334567899999999999988832 1222211    11112211        1222333


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...+...+...+...++..||++.++..+....
T Consensus       486 ~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  486 LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            447777888889999999999999888766554

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.34  E-value=0.14  Score=39.32  Aligned_cols=70  Identities=21%  Similarity=0.126  Sum_probs=52.5

Q ss_pred             cCCCCCcccccCCCceeeeeecccce-eeEEEEEEeccCCCceeEEeecch----------------------------H
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHL-GEMMICETEDIELDTEKVAVRTCR----------------------------G   69 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~f-g~V~~~~~~~~~~~~~~vavK~~~----------------------------~   69 (228)
                      ..|+...+....+++++.+.||.|.. |.|++..+     .+..+|+|..+                            .
T Consensus        25 ~gPKL~~F~~h~~~I~flefLg~g~~~~~V~kv~I-----~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~   99 (207)
T PF13095_consen   25 PGPKLEPFTHHGDDIEFLEFLGHGSHDGYVFKVEI-----DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYAD   99 (207)
T ss_pred             CCCCcCCcCCCCCcEeeeeecCCCCceeEEEEEEE-----CCeEEEEEEeeccccCCCccccccccccccccchhhhhcC
Confidence            44555555555589999999999999 99999999     77899999931                            1


Q ss_pred             HHHHHHHHHhhC---CCCCc--ceeeeee
Q psy796           70 DSLREIRFLSSL---QDPNL--VSILGVC   93 (228)
Q Consensus        70 ~~~~e~~~l~~l---~h~ni--v~~~g~~   93 (228)
                      -|..|.+.+.++   .+.++  ++.+|+.
T Consensus       100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  100 PFNCECRAFGRLKEAGREGLWAVKCHGYL  128 (207)
T ss_pred             hHHHHHHhhHHHHhccccCceEEEeeEEE
Confidence            256777777766   34455  7878776

>KOG3741|consensus

Probab=94.95  E-value=0.53  Score=41.26  Aligned_cols=67  Identities=13%  Similarity=0.080  Sum_probs=49.6

Q ss_pred             eeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC----CCCCeEEEeecccc-CCH
Q psy796           45 GEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG----EQPPWLVMEYPAQL-GDL  112 (228)
Q Consensus        45 g~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~----~~~~~lv~e~~~~~-g~L  112 (228)
                      .+-|++...-   +|-.++.|.+.       .....-++.|+++.|.|+|.+..++..    +..+.+|++|. |+ ++|
T Consensus       290 ~Ttyk~~s~~---DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYy-P~s~TL  365 (655)
T KOG3741|consen  290 ITTYKATSNV---DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYY-PSSPTL  365 (655)
T ss_pred             ceeEeeeecc---CCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecC-CCCchH
Confidence            4567776654   77888888883       123345789999999999999998873    34678999998 64 667


Q ss_pred             HHH
Q psy796          113 VQH  115 (228)
Q Consensus       113 ~~~  115 (228)
                      .++
T Consensus       366 ~d~  368 (655)
T KOG3741|consen  366 YDL  368 (655)
T ss_pred             HHH
Confidence            764

>KOG3087|consensus

Probab=94.75  E-value=0.15  Score=38.62  Aligned_cols=76  Identities=13%  Similarity=0.117  Sum_probs=55.2

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecc---------------hHHHHHHHHHHhhCCCCCc--ceeeeeeeCCC
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTC---------------RGDSLREIRFLSSLQDPNL--VSILGVCTGEQ   97 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~---------------~~~~~~e~~~l~~l~h~ni--v~~~g~~~~~~   97 (228)
                      ....+-+|.-+.|+.+.+     .++.+.||.-               +.+.++|+..|.+++--.|  ..+  ++.+.+
T Consensus        11 ~l~likQGAEArv~~~~~-----~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l--~~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-----SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRL--IFIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeecc-----CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE--EEEecC
Confidence            456788999999999998     6788888755               2556889999988753333  233  344566


Q ss_pred             CCeEEEeecccc-CCHHHHhhh
Q psy796           98 PPWLVMEYPAQL-GDLVQHLNS  118 (228)
Q Consensus        98 ~~~lv~e~~~~~-g~L~~~l~~  118 (228)
                      .-.|.|||+ ++ .++.+|+..
T Consensus        84 ~~~i~ME~~-~g~~~vk~~i~~  104 (229)
T KOG3087|consen   84 GGQIYMEFI-DGASTVKDFILS  104 (229)
T ss_pred             CCeEEEEec-cchhHHHHHHHH
Confidence            678999999 74 378888754

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.47  E-value=0.017  Score=40.44  Aligned_cols=39  Identities=28%  Similarity=0.380  Sum_probs=30.3

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecchHH----HHHHHHHHh
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD----SLREIRFLS   79 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~----~~~e~~~l~   79 (228)
                      +.||+|+.|.||+|++.    +|+.||||+.+.+    +...+.++.
T Consensus        17 ~PlasASiaQVh~a~l~----~g~~VaVKV~rP~i~~~i~~Dl~~l~   59 (119)
T PF03109_consen   17 EPLASASIAQVHRARLK----DGEEVAVKVQRPGIEEQIEADLRILR   59 (119)
T ss_pred             chhhheehhhheeeeec----ccchhhhhhcchHHHHHHHHHHHHHH
Confidence            57899999999999997    6899999999633    344444444

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.34  E-value=0.2  Score=37.96  Aligned_cols=74  Identities=18%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecc---------------hHHHHHHHHHHhhCCCCCc--ceeeeeeeCCCCCe
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTC---------------RGDSLREIRFLSSLQDPNL--VSILGVCTGEQPPW  100 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~---------------~~~~~~e~~~l~~l~h~ni--v~~~g~~~~~~~~~  100 (228)
                      .+++|.-+.++.+.+     .+..+.+|.-               +..-.+|+.++.+++--.|  .-++  ..+.....
T Consensus         3 ~i~~GAEa~i~~~~~-----~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~--dvD~~~~~   75 (204)
T COG3642           3 LIKQGAEAIIYLTDF-----LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVY--DVDPDNGL   75 (204)
T ss_pred             hhhCCcceeEEeeec-----cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEE--EEcCCCCE
Confidence            578899999999877     4555666654               1446789999988753333  3444  33455678


Q ss_pred             EEEeeccccCCHHHHhhhC
Q psy796          101 LVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~  119 (228)
                      |+|||+ ++..|.+++...
T Consensus        76 I~me~I-~G~~lkd~l~~~   93 (204)
T COG3642          76 IVMEYI-EGELLKDALEEA   93 (204)
T ss_pred             EEEEEe-CChhHHHHHHhc
Confidence            999999 988888888654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.20  E-value=0.068  Score=46.98  Aligned_cols=75  Identities=21%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch-----------------------------------------------H
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------------------------------------G   69 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------------------------------------~   69 (228)
                      +.|+.++-|.||.|.+.    +|+.||||+.+                                               -
T Consensus       131 ~PiAsASIaQVH~A~L~----sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~El  206 (517)
T COG0661         131 EPIASASIAQVHRAVLK----SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREEL  206 (517)
T ss_pred             CchhhhhHhhheeEEec----CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHh
Confidence            67899999999999997    68999999983                                               1


Q ss_pred             HHHHHHHHHhhC----CCCCcceeeeeeeC-CCCCeEEEeeccccCCHHHHh
Q psy796           70 DSLREIRFLSSL----QDPNLVSILGVCTG-EQPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        70 ~~~~e~~~l~~l----~h~niv~~~g~~~~-~~~~~lv~e~~~~~g~L~~~l  116 (228)
                      ++.+|+..+.++    ++..-+.+=.++.+ .+.-.|+|||+ +|-.+.+..
T Consensus       207 Dy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i-~Gi~i~d~~  257 (517)
T COG0661         207 DYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWI-DGIKISDIA  257 (517)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEee-CCEecccHH
Confidence            135566666555    22333444444433 34568999999 988887763

>PRK10593 hypothetical protein; Provisional

Probab=93.68  E-value=0.26  Score=40.30  Aligned_cols=76  Identities=20%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCC---CCcceeeeeeeCC---CCCe
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQD---PNLVSILGVCTGE---QPPW  100 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h---~niv~~~g~~~~~---~~~~  100 (228)
                      .+.-.+.||.|..+.||.-...     +..+.+|..+     ..+.+|.+.|+.+..   -.+.++++++...   ...+
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~-----~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~   89 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDS-----QGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV   89 (297)
T ss_pred             hhheeeecCCccceeEEEEEcC-----CCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence            3455678999999999997553     2345556554     467899999998853   2567888877543   4579


Q ss_pred             EEEeeccccCCHH
Q psy796          101 LVMEYPAQLGDLV  113 (228)
Q Consensus       101 lv~e~~~~~g~L~  113 (228)
                      +|||++ +++++.
T Consensus        90 LVmE~i-~G~~~~  101 (297)
T PRK10593         90 LLLERL-RGVSVE  101 (297)
T ss_pred             EEEecc-CCEecC
Confidence            999999 876653

>KOG1235|consensus

Probab=93.42  E-value=0.081  Score=46.58  Aligned_cols=27  Identities=22%  Similarity=0.335  Sum_probs=24.9

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTC   67 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~   67 (228)
                      +.||.-+.|.||+|+.+    ++..||||+.
T Consensus       167 ~piaaASlaQVhrA~L~----~G~~VaVKVQ  193 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLK----NGEDVAVKVQ  193 (538)
T ss_pred             chhhhcchhheEEEEec----CCCEEEEEec
Confidence            67899999999999998    6999999988

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.78  E-value=1.5  Score=37.48  Aligned_cols=78  Identities=15%  Similarity=0.068  Sum_probs=54.4

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecc--------------hHHHHHHHHHHhhC---CCCCcceeeeeeeCCC
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTC--------------RGDSLREIRFLSSL---QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~--------------~~~~~~e~~~l~~l---~h~niv~~~g~~~~~~   97 (228)
                      -.+.||.|.+..||+.....   .++.|+||.-              .+....|.+.|..+   ...++.+++.+.  .+
T Consensus        30 ~~~elggGn~N~VyrV~~~~---g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~  104 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTE---GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EE  104 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCC---CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CC
Confidence            34678999999999998752   2358999973              13457788888775   235677887664  45


Q ss_pred             CCeEEEeeccccCC-HHHHhhh
Q psy796           98 PPWLVMEYPAQLGD-LVQHLNS  118 (228)
Q Consensus        98 ~~~lv~e~~~~~g~-L~~~l~~  118 (228)
                      ..+++||++ ++.. +.+.|..
T Consensus       105 ~~~lVME~L-~~~~~lr~~Ll~  125 (401)
T PRK09550        105 LAVTVMEDL-SDHKILRKGLID  125 (401)
T ss_pred             CCEEEEecC-CCccHHHHHHhc
Confidence            568999999 6433 5555543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=91.62  E-value=0.91  Score=34.75  Aligned_cols=69  Identities=10%  Similarity=0.083  Sum_probs=46.6

Q ss_pred             eeecccceeeEEEEEEecc---CCCceeEEeecch-----------------------------HHH----HHHHHHHhh
Q psy796           37 ERLGSCHLGEMMICETEDI---ELDTEKVAVRTCR-----------------------------GDS----LREIRFLSS   80 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~---~~~~~~vavK~~~-----------------------------~~~----~~e~~~l~~   80 (228)
                      ..||.|.-+.||.|.-...   ...+..+|||+.+                             ..+    .+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            4689999999999975321   0024789999883                             011    378888888


Q ss_pred             CCC--CCcceeeeeeeCCCCCeEEEeeccccC
Q psy796           81 LQD--PNLVSILGVCTGEQPPWLVMEYPAQLG  110 (228)
Q Consensus        81 l~h--~niv~~~g~~~~~~~~~lv~e~~~~~g  110 (228)
                      +..  -++...+++    ..-+|+|||+ .++
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~I-g~~  109 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFI-GDD  109 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEc-CCC
Confidence            753  355566654    3568999999 654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=91.32  E-value=0.44  Score=38.35  Aligned_cols=70  Identities=21%  Similarity=0.206  Sum_probs=51.7

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch-----------------------------HHHHHHHHHHhhCCCC-
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------------------GDSLREIRFLSSLQDP-   84 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------------------~~~~~e~~~l~~l~h~-   84 (228)
                      ++..||-|.-+.||.|...    .+..++||.-+                             ...++|.+.|..+... 
T Consensus        95 iG~~IGvGKEsdVY~~~~~----~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G  170 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDP----KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG  170 (304)
T ss_pred             hccccccCccceEEEEECC----CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence            5789999999999999875    68999999762                             1136788888888654 


Q ss_pred             -CcceeeeeeeCCCCCeEEEeeccccCCHH
Q psy796           85 -NLVSILGVCTGEQPPWLVMEYPAQLGDLV  113 (228)
Q Consensus        85 -niv~~~g~~~~~~~~~lv~e~~~~~g~L~  113 (228)
                       .|.+-+    +.+.-.++|||+ .+-.|.
T Consensus       171 ~~VP~P~----~~nRHaVvMe~i-eG~eL~  195 (304)
T COG0478         171 VKVPKPI----AWNRHAVVMEYI-EGVELY  195 (304)
T ss_pred             CCCCCcc----ccccceeeeehc-ccceee
Confidence             444433    234568999999 865555

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.04  E-value=0.82  Score=39.25  Aligned_cols=89  Identities=19%  Similarity=0.306  Sum_probs=56.9

Q ss_pred             CCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-----HHHHHHHHhhh--C-CCccccCCCC-----CCCcHHHHHHHH
Q psy796          128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-----QVIQNAEHMYY--G-GELQVFLPKP-----SLCPRDIYDLMC  194 (228)
Q Consensus       128 ~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-----~~~~~~~~~~~--~-~~~~~~~~~~-----~~~~~~l~~li~  194 (228)
                      .-+...|-|.+||++++++.|+ ..||.+....     -....|..+..  . +..+...+.|     .-++..+..+..
T Consensus       197 ~r~~~hD~FGLavLiF~lL~gg-rHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~  275 (637)
T COG4248         197 ERTANHDNFGLAVLIFHLLFGG-RHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQ  275 (637)
T ss_pred             CCCccccchhHHHHHHHHHhcC-CCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHH
Confidence            4567899999999999999974 6888764321     11112222211  0 1111122222     335788999999


Q ss_pred             HhhccCC--CCCCCHHHHHHHHHHH
Q psy796          195 DCWKRDQ--TMRPTFKQIYSFMKRS  217 (228)
Q Consensus       195 ~c~~~~p--~~Rps~~~v~~~l~~~  217 (228)
                      +|+....  .-|||++.-+..|..+
T Consensus       276 qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         276 QAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             HHhcccCCCCCCCCHHHHHHHHHHH
Confidence            9997654  5899999888777766

>PLN02876 acyl-CoA dehydrogenase

Probab=90.14  E-value=1.4  Score=41.49  Aligned_cols=75  Identities=16%  Similarity=0.280  Sum_probs=53.1

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCC-CCCc--ceeeeeeeCC---CCCeE
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQ-DPNL--VSILGVCTGE---QPPWL  101 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~-h~ni--v~~~g~~~~~---~~~~l  101 (228)
                      .+.++.|.++.+|+....... ....+++|...        ..+.+|.++++.+. |.++  .++++++.+.   ...++
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~-~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGG-SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCC-cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            567899999999987664210 11456666551        46889999999985 6665  6888887664   35789


Q ss_pred             EEeeccccCCH
Q psy796          102 VMEYPAQLGDL  112 (228)
Q Consensus       102 v~e~~~~~g~L  112 (228)
                      ||||+ ++..+
T Consensus       122 VME~v-~G~~~  131 (822)
T PLN02876        122 IMEYL-EGRIF  131 (822)
T ss_pred             EEEec-CCccc
Confidence            99999 86543

>KOG2137|consensus

Probab=89.59  E-value=0.084  Score=47.26  Aligned_cols=82  Identities=15%  Similarity=0.148  Sum_probs=53.9

Q ss_pred             cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy796          126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       126 ~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rp  205 (228)
                      ....+.++|+||+|+.++-++.+| ..-+...+...... ......+..   ......+++.|+++-+.+.+..+..-||
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~g-k~i~~a~~~~~~~~-~~~~~~~~~---~~~~s~~~p~el~~~l~k~l~~~~~~rp  257 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGG-KSIIAANGGLLSYS-FSRNLLNAG---AFGYSNNLPSELRESLKKLLNGDSAVRP  257 (700)
T ss_pred             cccccccccceeeeeEEEEEecCC-cchhhccCCcchhh-hhhcccccc---cccccccCcHHHHHHHHHHhcCCcccCc
Confidence            456789999999999999988753 33333332221111 111111000   2334577899999999999999999999


Q ss_pred             CHHHHHH
Q psy796          206 TFKQIYS  212 (228)
Q Consensus       206 s~~~v~~  212 (228)
                      ++..+..
T Consensus       258 ~~~~l~~  264 (700)
T KOG2137|consen  258 TLDLLLS  264 (700)
T ss_pred             chhhhhc
Confidence            8777653

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=89.55  E-value=1.4  Score=34.56  Aligned_cols=71  Identities=8%  Similarity=0.069  Sum_probs=50.0

Q ss_pred             ecccce-eeEEEEEEeccCCCceeEEeecchH----HHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEEeeccccCCH
Q psy796           39 LGSCHL-GEMMICETEDIELDTEKVAVRTCRG----DSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVMEYPAQLGDL  112 (228)
Q Consensus        39 ig~G~f-g~V~~~~~~~~~~~~~~vavK~~~~----~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~e~~~~~g~L  112 (228)
                      |-.|.. ..||+...     .+..+.+|....    +..+|++++..+. +--+.+++++.......+++||++ +|.++
T Consensus         6 ~~~g~~~~~v~~~~~-----~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i-~G~~l   79 (244)
T cd05150           6 VTEGQSGATVYRLDG-----KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAV-PGVPA   79 (244)
T ss_pred             cCCCCCcCeEEEEcC-----CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEee-CCccH
Confidence            344444 77888754     346788888754    5889999988874 333457777776655679999999 87777


Q ss_pred             HHH
Q psy796          113 VQH  115 (228)
Q Consensus       113 ~~~  115 (228)
                      ...
T Consensus        80 ~~~   82 (244)
T cd05150          80 AAL   82 (244)
T ss_pred             hHh
Confidence            644

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=89.45  E-value=0.86  Score=35.63  Aligned_cols=66  Identities=14%  Similarity=0.022  Sum_probs=49.4

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCc--ceeeeeeeCCCCCeEEEeecccc
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNL--VSILGVCTGEQPPWLVMEYPAQL  109 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~ni--v~~~g~~~~~~~~~lv~e~~~~~  109 (228)
                      ..||+|.-+.||+.       .+..+++|...     ....+|.+.+..+....+  .+.+++....+...++||++ +|
T Consensus         7 ~~i~~G~t~~~y~~-------~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i-~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH-------KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELI-VG   78 (226)
T ss_pred             eeecCCCCcceeEe-------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeec-CC
Confidence            67899999999973       23356677763     567899999988864444  57777776776778999999 86


Q ss_pred             C
Q psy796          110 G  110 (228)
Q Consensus       110 g  110 (228)
                      .
T Consensus        79 ~   79 (226)
T TIGR02172        79 K   79 (226)
T ss_pred             c
Confidence            5

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=89.21  E-value=2.1  Score=32.46  Aligned_cols=33  Identities=24%  Similarity=0.252  Sum_probs=21.7

Q ss_pred             HHHHHHHHhhCCCC--CcceeeeeeeCCCCCeEEEeeccc
Q psy796           71 SLREIRFLSSLQDP--NLVSILGVCTGEQPPWLVMEYPAQ  108 (228)
Q Consensus        71 ~~~e~~~l~~l~h~--niv~~~g~~~~~~~~~lv~e~~~~  108 (228)
                      ..+|.+.|.++..-  ++.+.+++.    .-.|+|||+ +
T Consensus        55 ~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I-~   89 (188)
T PF01163_consen   55 AKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYI-G   89 (188)
T ss_dssp             HHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE---E
T ss_pred             HHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEec-C
Confidence            47899999999765  456666553    447999999 6

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=87.98  E-value=2.2  Score=32.70  Aligned_cols=73  Identities=21%  Similarity=0.261  Sum_probs=52.0

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCC--CcceeeeeeeCC---CCCeEEEee
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDP--NLVSILGVCTGE---QPPWLVMEY  105 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~--niv~~~g~~~~~---~~~~lv~e~  105 (228)
                      ++.++.|..+.||.....     +..+++|...     ..+.+|..++..+...  .+.+++......   ...+++|++
T Consensus         2 i~~l~~G~~n~~~~v~~~-----~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTD-----DGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEEESSSSEEEEEEET-----TSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEEC-----CcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence            467899999999999873     4699999884     4577888888877433  345666644332   235899999


Q ss_pred             ccccCCHHH
Q psy796          106 PAQLGDLVQ  114 (228)
Q Consensus       106 ~~~~g~L~~  114 (228)
                      + ++..+..
T Consensus        77 i-~g~~~~~   84 (239)
T PF01636_consen   77 I-PGRPLDD   84 (239)
T ss_dssp             E-SSEEHHH
T ss_pred             e-ccccccc
Confidence            9 8877776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1033|consensus

Probab=86.89  E-value=0.17  Score=43.91  Aligned_cols=62  Identities=19%  Similarity=0.273  Sum_probs=49.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+++.+.++|.|+||.|+.+....   ..-..|||.+.        ....+|+.-+..+.|+++++++..+..
T Consensus        49 ~~~e~~~~~~~~g~~~~~~~~n~~---d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   49 NDFEPGQCLGRGGFGVVFSAQNKA---DENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             ccccccccccccCccccCCccccc---cchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            456778899999999999987753   44577888772        556788888899999999998877753

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=85.30  E-value=4  Score=33.28  Aligned_cols=72  Identities=15%  Similarity=0.206  Sum_probs=46.4

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC---CCCcceeeeeeeCCCCCeEEEee
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ---DPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~---h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++-.+.++-|....+|+...     ++..+.||.-.    ..|..|.+-|+.+.   .-.+.+++++....+..+|+|||
T Consensus        19 i~~~~~v~GG~i~~a~~~~~-----~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~   93 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDT-----DGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEF   93 (288)
T ss_dssp             --EEEEE--SSSSEEEEEET-----TS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-
T ss_pred             eeeeEecCCCChhheEEEEC-----CCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEe
Confidence            55567888899999998763     77899999874    45888998888773   44566888887777777999999


Q ss_pred             ccccC
Q psy796          106 PAQLG  110 (228)
Q Consensus       106 ~~~~g  110 (228)
                      + +.+
T Consensus        94 l-~~~   97 (288)
T PF03881_consen   94 L-EMG   97 (288)
T ss_dssp             -----
T ss_pred             e-cCC
Confidence            8 643

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG4258|consensus

Probab=84.61  E-value=0.22  Score=45.62  Aligned_cols=32  Identities=16%  Similarity=0.158  Sum_probs=28.1

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEe
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETE   53 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~   53 (228)
                      .-.+.|++.++ +.+.+.+|+|+||.||.|.-+
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence            45678999999 999999999999999999654

>KOG1035|consensus

Probab=83.37  E-value=2.3  Score=41.09  Aligned_cols=67  Identities=12%  Similarity=0.186  Sum_probs=42.8

Q ss_pred             CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy796          129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFK  208 (228)
Q Consensus       129 ~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~  208 (228)
                      .....|+|.+|.....+..+. ..+-.......    +              .+.....+..+...+|+-.++++|+++.
T Consensus       369 ~~r~~dL~~lgll~~~~~~~~-~i~~~~~~~~~----~--------------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~  429 (1351)
T KOG1035|consen  369 KSRLTDLWCLGLLLLQLSQGE-DISEKSAVPVS----L--------------LDVLSTSELLDALPKCLDEDSEERLSAL  429 (1351)
T ss_pred             hhhhhHHHHHHHHHhhhhhcC-cccccccchhh----h--------------hccccchhhhhhhhhhcchhhhhccchh
Confidence            344479999999998888742 12211111110    0              1122222677888999999999999999


Q ss_pred             HHHHHH
Q psy796          209 QIYSFM  214 (228)
Q Consensus       209 ~v~~~l  214 (228)
                      +++.+.
T Consensus       430 ~ll~~~  435 (1351)
T KOG1035|consen  430 ELLTHP  435 (1351)
T ss_pred             hhhhch
Confidence            998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	228
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		6e-14
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-14
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		7e-14
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		7e-14
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		7e-14
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		7e-14
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-14
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		7e-14
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		7e-14
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-14
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-14
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		7e-14
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-14
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-14
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		8e-14
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-13
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-13
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		9e-13
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		9e-13
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		9e-13
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-12
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-12
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-12
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-12
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-12
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-12
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-12
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-12
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-12
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-12
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-12
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-12
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-12
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-12
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-12
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-12
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-12
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-12
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-12
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-12
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-12
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-12
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-12
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-12
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-12
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-12
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-12
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-12
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-12
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-12
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-12
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-12
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-12
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		4e-12
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-12
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		4e-12
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		4e-12
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		4e-12
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		5e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-12
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-12
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		6e-12
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		6e-12
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-12
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		7e-12
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		7e-12
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-11
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-11
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		1e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-11
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		6e-11
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-11
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		6e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		6e-11
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-11
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		7e-11
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-11
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		7e-11
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-11
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		8e-11
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-11
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		9e-11
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		9e-11
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		9e-11
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		9e-11
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		9e-11
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		9e-11
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-11
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		9e-11
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-10
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-10
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-10
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-10
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-10
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
1oec_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-10
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-10
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-10
3b2t_A	311	Structure Of Phosphotransferase Length = 311		4e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		6e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		7e-10
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		8e-10
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-09
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-09
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-09
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-09
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-09
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-09
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-09
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-09
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-09
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-09
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-09
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-09
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-09
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-09
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-09
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-09
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-09
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-09
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-09
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-09
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-09
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-09
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		4e-09
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-09
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		4e-09
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-09
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		4e-09
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-09
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		4e-09
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		4e-09
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-09
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-09
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		4e-09
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-09
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		4e-09
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-09
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-09
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-09
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-09
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-09
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-09
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-09
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-09
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-09
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-09
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-09
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-09
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-09
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		5e-09
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-09
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-09
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-09
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		5e-09
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		5e-09
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-09
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		5e-09
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		5e-09
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		5e-09
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		5e-09
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-09
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		5e-09
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		5e-09
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-09
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-09
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-09
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-09
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-09
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-09
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-09
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-08
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-08
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-08
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-08
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-08
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-08
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-08
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		1e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-08
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-08
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-08
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-08
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-08
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-08
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-08
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-08
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-08
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-08
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-08
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-08
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-08
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-08
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-08
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-08
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-08
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-08
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		3e-08
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-08
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-08
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-08
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-08
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		5e-08
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-08
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-08
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		5e-08
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		5e-08
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-08
4fl2_A	636	Structural And Biophysical Characterization Of The		5e-08
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		5e-08
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		5e-08
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-08
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-08
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-08
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-08
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-08
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		5e-08
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-08
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-08
4fl3_A	635	Structural And Biophysical Characterization Of The		5e-08
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-08
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		5e-08
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-08
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		6e-08
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		6e-08
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		6e-08
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-08
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		6e-08
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-08
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-08
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-08
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		9e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-07
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-07
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-07
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-07
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-07
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-07
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-07
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-07
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-07
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-07
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-07
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-07
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		3e-07
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-07
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-07
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-07
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-07
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-07
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-07
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-07
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-07
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-07
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-07
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-07
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-07
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		4e-07
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		5e-07
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		6e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		6e-07
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		7e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		5e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		7e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		8e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		4e-04

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 214 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 266 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 294

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+VWSF V +WE+L+   ++P+ ++TN  VI + E  Y        LP P  CP  
Sbjct: 231 FSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHA 282
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++ LM DCW +D+  RP F QI S +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVL 308

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+VWSF V +WE+L+   ++P+ ++TN  VI + E  Y        LP P  CP  
Sbjct: 231 FSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHA 282
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++ LM DCW +D+  RP F QI S +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVL 308

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S   ++P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 224 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 304

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 82/263 (31%)
Query: 22  EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREI 75
           E D   IPR  L++ ++LG+   GE+ +           KVAV+T +  S      L E 
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK----HTKVAVKTMKPGSMSVEAFLAEA 228
Query: 76  RFLSSLQDPNLVSILGVCTGE-------------------------QPPWLVMEYPAQLG 110
             + +LQ   LV +  V T E                         QP   ++++ AQ+ 
Sbjct: 229 NVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 111 DLVQHLNSADNLTRDR---------------------------------------DRYTC 131
           + +  +   + + RD                                          +T 
Sbjct: 289 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTI 348
Query: 132 QSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD 191
           +S+VWSF + L EI++  R  P+P ++N +VI+  E  Y        +P+P  CP ++Y+
Sbjct: 349 KSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEELYN 400
Query: 192 LMCDCWKRDQTMRPTFKQIYSFM 214
           +M  CWK     RPTF+ I S +
Sbjct: 401 IMMRCWKNRPEERPTFEYIQSVL 423

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  +TN+ VI+  E  Y        LP P  CP 
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYG-ERPYWEMTNQDVIKAVEEGYR-------LPSPMDCPA 254
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++++  RP F +I + + +
Sbjct: 255 ALYQLMLDCWQKERNSRPKFDEIVNMLDK 283

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLLK 287

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 409
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 410 SLHDLMCQCWRKDPEERPTFEYLQAFLE 437

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 206 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 257
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 258 VTDLMRMCWQFNPKMRPTFLEIVNLLK 284

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 234 SLHDLMCQCWRKDPEERPTFEYLQAFLE 261

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 208 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 260 VTDLMRMCWQFNPKMRPTFLEIVNLLK 286

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW++D   RPTF+ + +F++
Sbjct: 232 SLHDLMCQCWRKDPEERPTFEYLQAFLE 259

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 210 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 262 VTDLMRMCWQFNPNMRPTFLEIVNLLK 288

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLLK 287

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPAPMDCPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++++  RP F+QI   + +
Sbjct: 276 GLHQLMLDCWQKERAERPKFEQIVGILDK 304

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+ WS+ + +WE++S   ++P+  ++N+ VI   E  Y        LP P  CP 
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPT 250
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
            ++ LM DCW++D+  RP F Q+ S + +     ++L +
Sbjct: 251 SLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 289

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S++WSF V LWEI SL  ++P+  L+NEQV++    +  GG    +L +P  CP  
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + DLM  CW+ +  MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  +TN+ VI   E  Y        LP P  CP 
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPS 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++D+  RP F QI + + +
Sbjct: 242 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  +TN+ VI   E  Y        LP P  CP 
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPS 267
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++D+  RP F QI + + +
Sbjct: 268 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+ WS+ + +WE++S   ++P+  ++N+ VI   E  Y        LP P  CP 
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPT 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
            ++ LM DCW++D+  RP F Q+ S + +     ++L +
Sbjct: 249 SLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 287

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 491
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 492 SLHDLMCQCWRKEPEERPTFEYLQAFLE 519

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF + LWE  SL    P+P+L+N+Q  +  E    GG L    P P LCP 
Sbjct: 291 RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVEK---GGRL----PCPELCPD 342
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
            ++ LM  CW  +   RP+F  IY
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIY 366

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF + LWE  SL    P+P+L+N+Q  +  E    GG L    P P LCP 
Sbjct: 291 RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVEK---GGRL----PCPELCPD 342
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
            ++ LM  CW  +   RP+F  IY
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIY 366

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 233 SLHDLMCQCWRKEPEERPTFEYLQAFLE 260

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 240 SLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 235
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 236 SLHDLMCQCWRKEPEERPTFEYLQAFLE 263

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 211 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 262
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 263 LFELMRMCWQYNPKMRPSFLEIISSIK 289

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 240 SLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 210 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 262 LFELMRMCWQYNPKMRPSFLEIISSIK 288

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            ++DLMC CW+++   RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 204 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 255
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 256 LFELMRMCWQYNPKMRPSFLEIISSIK 282

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 208 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 260 LFELMRMCWQYNPKMRPSFLEIISSIK 286

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 207 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 258
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 259 LFELMRMCWQYNPKMRPSFLEIISSIK 285

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 211 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 262
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 263 LFELMRMCWQYNPKMRPSFLEIISSIK 289

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 210 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 262 LFELMRMCWQYNPKMRPSFLEIISSIK 288

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+++  R  P+P + N +V++  E  Y        +P P  CP 
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPI 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +++LM  CWK+D   RPTF+ + SF++
Sbjct: 234 SLHELMIHCWKKDPEERPTFEYLQSFLE 261

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 239 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 290
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 291 LFELMRMCWQYNPKMRPSFLEIISSIK 317

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 217 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 268
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 269 LFELMRMCWQYNPKMRPSFLEIISSIK 295

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 288
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
           +IY +M  CW  + T RPTF+QI SF++   
Sbjct: 289 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 319

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 217 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 268
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +++LM  CW+ +  MRP+F +I S +K
Sbjct: 269 LFELMRMCWQYNPKMRPSFLEIISSIK 295

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 294
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +IY +M  CW  + T RPTF+QI SF++
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQ 322

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 290
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
           +IY +M  CW  + T RPTF+QI SF++   
Sbjct: 291 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 321

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 282
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
           +IY +M  CW  + T RPTF+QI SF++   
Sbjct: 283 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 313

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 294
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +IY +M  CW  + T RPTF+QI SF++
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQ 322

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 246
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW+++++ RP F QI + + +
Sbjct: 247 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 275

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           YT QS+VWS+ + LWEI SL  + P+P  L N +  +  +  Y        + +P+  P+
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 296
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
           +IY +M  CW  + T RPTF+QI SF++   
Sbjct: 297 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 327

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 261
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW+++++ RP F QI + + +
Sbjct: 262 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 290

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  ++N+ VI+  E  Y        LP P  CP 
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 240
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW+++++ RP F QI + + +
Sbjct: 241 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 269

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 202 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + +LM  CW+ +  MRP+F +I S +K
Sbjct: 254 LLELMRMCWQYNPKMRPSFLEIISSIK 280

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P ++N +VI+  E  Y        +P+P  CP +
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEE 413
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +Y++M  CWK     RPTF+ I S +
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVL 439

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N +VI+        G +   L +P +CP+
Sbjct: 211 KFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECITQ----GRV---LERPRVCPK 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
           ++YD+M  CW+R+   R   K+IY  +
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEIYKIL 289

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P ++N +VI+  E  Y        +P+P  CP +
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEE 240
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +Y++M  CWK     RPTF+ I S +
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYIQSVL 266

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T  S+VWSF V LWEI +L  ++P+  L+NEQV++    +  GG     L KP  CP  
Sbjct: 204 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 255
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           + +LM  CW+ +  MRP+F +I S +K
Sbjct: 256 LLELMRMCWQYNPKMRPSFLEIISSIK 282

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWSF + +WE+++   ++P+  L+N +V++     +        LP P  CP 
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPS 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            IY LM  CW++++  RP F  I S + +
Sbjct: 278 AIYQLMMQCWQQERARRPKFADIVSILDK 306

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 321
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
           +Y +M DCW    + RPTFKQ+   + R     SN ++
Sbjct: 322 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEM 359

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 272
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 273 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 307

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 274 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 308

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 269
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 270 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 304

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW FAV +WEILS  + +PF  L N+ VI   E     G+    LPKP LCP 
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 253
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 254 VLYTLMTRCWDYDPSDRPRFTEL 276

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWS  V LWEI +  + +P+  L+N +VI   E +  G  LQ    +P  CP+
Sbjct: 206 KFTTESDVWSLGVVLWEIFTYGK-QPWYQLSNNEVI---ECITQGRVLQ----RPRTCPQ 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y+LM  CW+R+  MR   K I++ ++
Sbjct: 258 EVYELMLGCWQREPHMRKNIKGIHTLLQ 285

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  +
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 265
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     SN
Sbjct: 266 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 300

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW FAV +WEILS  + +PF  L N+ VI   E     G+    LPKP LCP 
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTEL 264

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 234
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 235 LYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 233
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 234 LYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW FAV +WEILS  + +PF  L N+ VI   E     G+    LPKP LCP 
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 237
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 238 VLYTLMTRCWDYDPSDRPRFTEL 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 246
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 247 LYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 248 LYQLMRLCWKERPEDRPTFDYLRSVLE 274

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 245 LYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 240
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 241 LYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y++M +CW  D  MRP+F Q+
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQL 264

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 244 LYQLMRLCWKERPEDRPTFDYLRSVLE 270

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 249 LYQLMRLCWKERPEDRPTFDYLRSVLE 275

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 239
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 240 LYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 413
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +YD+M +CW  D   RPTF Q+
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQL 436

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 245 LYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +Y LM  CWK     RPTF  + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           ++   S+VWSF VTL+E+L+ C     PH    ++I + +     G++ V          
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ-----GQMTVLRLTELLERG 245
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
             LP+P  CP +IY LM +CW+ + + RPTF+ +   ++ +
Sbjct: 246 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTA 286

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           ++   S+VWSF VTL+E+L+ C     PH    ++I + +     G++ V          
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ-----GQMTVLRLTELLERG 244
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
             LP+P  CP +IY LM +CW+ + + RPTF+ +   ++ +
Sbjct: 245 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTA 285

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 226
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y++M +CW  D  MRP+F Q+
Sbjct: 227 AVYEVMKNCWHLDAAMRPSFLQL 249

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP  
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPA 233
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y++M +CW  D  MRP+F Q+
Sbjct: 234 VYEVMKNCWHLDAAMRPSFLQL 255

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|1OEC|A Chain A, Fgfr2 Kinase Domain Length = 316

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 280 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 314

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 333
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 334 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 276
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 277 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 311

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  +
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           +Y +M DCW    + RPTFKQ+   + R     +N
Sbjct: 275 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 309

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +YT QS+VWS+ VT+WE+++   + P+  L   +V    E     GE    L +P +C  
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAE-PYAGLRLAEVPDLLEK----GER---LAQPQICTI 244
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D+ +RPTFK++ +   R
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTR 273

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +YT QS+VWS+ VT+WE+++   + P+  L   +V    E     GE    L +P +C  
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAE-PYAGLRLAEVPDLLEK----GER---LAQPQICTI 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D+ +RPTFK++ +   R
Sbjct: 263 DVYMVMVKCWMIDENIRPTFKELANEFTR 291

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           R R+T QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGA-KPYDGIPAREIPDLLEK----GER---LPQPPIC 246
Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             D+Y +M  CW  D   RP F+++ S   R
Sbjct: 247 TIDVYMIMVKCWMIDSECRPRFRELVSEFSR 277

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           ++   S+VWSF VTL+E+L+ C     P     ++I  A+     G++ V          
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 267
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
             LP+P  CP ++Y LM +CW+ + + RPTF+ +   +K
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +SNVWSF + L+EI++  +  P+P  TN  V+      Y        +P+   CP +
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGK-IPYPGRTNADVMSALSQGYR-------MPRMENCPDE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +YD+M  CWK     RPTF  + S +
Sbjct: 239 LYDIMKMCWKEKAEERPTFDYLQSVL 264

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 193 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 244
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 245 TLYSLMTKCWAYDPSRRPRFTEL 267

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 191 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 243 TLYSLMTKCWAYDPSRRPRFTEL 265

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 216 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 267
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 268 TLYSLMTKCWAYDPSRRPRFTEL 290

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 190 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 242 TLYSLMTKCWAYDPSRRPRFTEL 264

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 568 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 619
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 620 TLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 568 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 619
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 620 TLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 185 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 236
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 237 TLYSLMTKCWAYDPSRRPRFTEL 259

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+    GE    LP P  CP 
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y LM  CW  D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFG-GKPYDGIPTREIPDLLEK----GER---LPQPPICTI 269
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D   RP FK++ +   R
Sbjct: 270 DVYMVMVKCWMIDADSRPKFKELAAEFSR 298

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFG-GKPYDGIPTREIPDLLEK----GER---LPQPPICTI 246
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D   RP FK++ +   R
Sbjct: 247 DVYMVMVKCWMIDADSRPKFKELAAEFSR 275

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           ++   S+VWSF VTL+E+L+ C     P     ++I  A+     G++ V          
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 250
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
             LP+P  CP ++Y LM +CW+ + + RPTF+ +   +K
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
           YT +S+VWS+ + LWE+ SL    P+P +         +  +Y    + F +  P   P 
Sbjct: 240 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 291
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           ++YD+M  CW  D   RPTFKQI   +++  +  +N
Sbjct: 292 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           ++   S+VWSF VTL+E+L+ C     P     ++I  A+     G++ V          
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 250
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
             LP+P  CP ++Y LM +CW+ + + RPTF+ +   +K
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLS 273

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 240 KVYTIMYSCWHEKADERPTFKILLS 264

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLS 273

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           +RYT +S+VW++ V LWEI S    +P+  + +E+VI      YY  +  + L  P  CP
Sbjct: 251 NRYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVI------YYVRDGNI-LACPENCP 302
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++Y+LM  CW +    RP+F  I+  ++R
Sbjct: 303 LELYNLMRLCWSKLPADRPSFCSIHRILQR 332

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 228
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLS 253

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
           YT +S+VWS+ + LWE+ SL    P+P +         +  +Y    + F +  P   P 
Sbjct: 242 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 293
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           ++YD+M  CW  D   RPTFKQI   +++  +  +N
Sbjct: 294 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 233 KVYTIMYSCWHEKADERPTFKILLS 257

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
           YT +S+VWS+ + LWE+ SL    P+P +         +  +Y    + F +  P   P 
Sbjct: 224 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           ++YD+M  CW  D   RPTFKQI   +++  +  +N
Sbjct: 276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLS 258

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
           YT +S+VWS+ + LWE+ SL    P+P +         +  +Y    + F +  P   P 
Sbjct: 247 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 298
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           ++YD+M  CW  D   RPTFKQI   +++  +  +N
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +    AEH+  G    + L +P L   
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y +M  CW      RPTFK + S
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLS 258

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
           YT +S+VWS+ + LWE+ SL    P+P +         +  +Y    + F +  P   P 
Sbjct: 247 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 298
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
           ++YD+M  CW  D   RPTFKQI   +++  +  +N
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 249 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF V LWE+L+     P+ H+       +  H    G     LP+P  CP 
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGA-PPYRHIDPF----DLTHFLAQGRR---LPQPEYCPD 255
Query: 188 DIYDLMCDCWKRDQTMRPTFK 208
            +Y +M  CW+ D  +RPTF+
Sbjct: 256 SLYQVMQQCWEADPAVRPTFR 276

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 230 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 281
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 282 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 312

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 193 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 245 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 202 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 254 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 284

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 251
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 249 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI++L  + P+P +  E++    +  +        + +P  C  +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y LM  CWK++   RP F  I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI++L  + P+P +  E++    +  +        + +P  C  +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y LM  CWK++   RP F  I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 221 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 272
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 273 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 303

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 190 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 241
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI++L  + P+P +  E++    +  +        + +P  C  +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y LM  CWK++   RP F  I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 251
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
           ADNL      YT  S+VW+F VT+WEI++  +  P+  + N ++     ++  G  L+  
Sbjct: 212 ADNL------YTVHSDVWAFGVTMWEIMTRGQ-TPYAGIENAEIYN---YLIGGNRLK-- 259
Query: 179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTF 207
             +P  C  ++YDLM  CW  D   RP+F
Sbjct: 260 --QPPECMEEVYDLMYQCWSADPKQRPSF 286

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +S+VWSF + L+EI++  +  P+P  TN  V+      Y        +P+   CP +
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGK-IPYPGRTNADVMTALSQGYR-------MPRVENCPDE 239
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +YD+M  CWK     RPTF  + S +
Sbjct: 240 LYDIMKMCWKEKAEERPTFDYLQSVL 265

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N + I   + +  G EL+    +P  CP 
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 287
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y +M  CW+R+   R + K +++ ++
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDVHARLQ 315

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           ++  S+ W F VTLWE+ +  ++ P+  L   Q++   +     GE    LP+P  CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           IY++M  CW      RPTF  +  F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N + I   + +  G EL+    +P  CP 
Sbjct: 207 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 258
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y +M  CW+R+   R + K +++ ++
Sbjct: 259 EVYAIMRGCWQREPQQRHSIKDVHARLQ 286

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N + I   + +  G EL+    +P  CP 
Sbjct: 213 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y +M  CW+R+   R + K +++ ++
Sbjct: 265 EVYAIMRGCWQREPQQRHSIKDVHARLQ 292

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 445
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIH 470

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 484
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEIH 509

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 239
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIH 264

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 239
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIH 264

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 250 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 251 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 281

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 250 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 248 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  +
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 266
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +YDLM  CW+     RP+F QI   + R
Sbjct: 267 VYDLMRQCWREKPYERPSFAQILVSLNR 294

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWS+ VT+WE+++    KP+  +   ++    E     GE    LP+P +C  D
Sbjct: 206 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 257
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
           +Y +M  CW  D   RP F+++   +S M R
Sbjct: 258 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 288

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 251
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEIH 276

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  +
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 269
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +YDLM  CW+     RP+F QI   + R
Sbjct: 270 VYDLMRQCWREKPYERPSFAQILVSLNR 297

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 242
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIH 267

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  +
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           +YDLM  CW+     RP+F QI   + R
Sbjct: 260 VYDLMRQCWREKPYERPSFAQILVSLNR 287

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 291
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 292 VYRIMTQCWQHQPEDRPNFAII 313

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 314
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 315 VYRIMTQCWQHQPEDRPNFAII 336

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 281 VYRIMTQCWQHQPEDRPNFAII 302

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++  S++WS+ V LWE+ S    +P+   +N+ V++   +       +  LP P  CP 
Sbjct: 206 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRN-------RQVLPCPDDCPA 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN 219
            +Y LM +CW    + RP FK I+S ++   N
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT +S+VW+F VT+WEI +     P+P + N ++    +++ +G  L+    +P  C  +
Sbjct: 226 YTSKSDVWAFGVTMWEIATRGM-TPYPGVQNHEMY---DYLLHGHRLK----QPEDCLDE 277
Query: 189 IYDLMCDCWKRDQTMRPTF 207
           +Y++M  CW+ D   RPTF
Sbjct: 278 LYEIMYSCWRTDPLDRPTF 296

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 290
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 291 VYRIMTQCWQHQPEDRPNFAII 312

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAII 295

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 300
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 301 VYRIMTQCWQHQPEDRPNFAII 322

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 265
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 266 VYRIMTQCWQHQPEDRPNFAII 287

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +T +++ WSF V LWEI SL    P+P  +N++V+   E +  GG +      P  CP  
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y +M  CW+     RP F  I
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAII 295

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++  S++WS+ V LWE+ S    +P+   +N+ V++   +       +  LP P  CP 
Sbjct: 223 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRN-------RQVLPCPDDCPA 274
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN 219
            +Y LM +CW    + RP FK I+S ++   N
Sbjct: 275 WVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +Y+ +S+VW+F + +WE+ SL +  P+   TN +V+      +        L +P L   
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASD 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            IY +M  CW      RPTF+Q+ S
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLS 257

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 266
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 235
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 236 EMYDLMNLCWTYDVENRPGFAAV 258

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 279
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 266
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 242 EMYDLMNLCWTYDVENRPGFAAV 264

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 237
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAV 260

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 200 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 255
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 256 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 600
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 601 EMYDLMNLCWTYDVENRPGFAAV 623

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 247
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 248 EMYDLMNLCWTYDVENRPGFAAV 270

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 242 EMYDLMNLCWTYDVENRPGFAAV 264

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 198 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 253
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 254 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 254
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 255 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 249
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 250 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 252
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 253 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V      M   GE    +  P+ CPR
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTA----MLEKGER---MGCPAGCPR 599
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 600 EMYDLMNLCWTYDVENRPGFAAV 622

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 255
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 256 EMYDLMNLCWTYDVENRPGFAAV 278

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 191 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 246
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 247 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 258 EMYDLMNLCWTYDVENRPGFAAV 280

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E     GE    +  P+ CPR
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++YDLM  CW  D   RP F  +
Sbjct: 258 EMYDLMNLCWTYDVENRPGFAAV 280

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
           +++  S+VWSF V L+E+ +       P     ++I N +     G++ VF         
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 247
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             LP+P  CP +IY +M +CW  +   RP+F+ +
Sbjct: 248 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLPKPSL 184
           YT +S+VWS+ + LWEI SL  + P+P +  +    ++IQN   M           +P  
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVN-PYPGIPVDANFYKLIQNGFKM----------DQPFY 299
Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
              +IY +M  CW  D   RP+F  + SF+
Sbjct: 300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CWK     RP F ++
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRL 254

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 251
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CWK     RP F ++
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRL 274

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CWK     RP F ++
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRL 254

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 229
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CWK     RP F ++
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRL 252

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFXRRLKEGTRMRA----PDYTTPE 275
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSEL 297

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 234
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CW+     RP F ++
Sbjct: 235 HVYQIMNHCWRERPEDRPAFSRL 257

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
            +Y +M  CW+     RP F ++
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRL 255

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 331
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSEL 353

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 324
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSEL 346

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 329
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSEL 351

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 322
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSEL 344

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 323
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 324 PLYEVMLKCWHPKAEMRPSFSELVS 348

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 275
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSEL 297

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 316
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 317 MYQTMLDCWHGEPSQRPTFSEL 338

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           + ++ +S+VW+F V LWEI +     P+P +   QV    E  Y        + +P  CP
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYDLLEKGYR-------MEQPEGCP 257
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
             +Y+LM  CWK     RP+F + +
Sbjct: 258 PKVYELMRACWKWSPADRPSFAETH 282

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 282
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 283 PLYEVMLKCWHPKAEMRPSFSELVS 307

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +Y  M DCW  + + RPTF ++   +
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
           +Y  M DCW  + + RPTF ++   +
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 263
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 281
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 282 MYQTMLDCWHGEPSQRPTFSEL 303

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           YT QS+VWSF V LWEI SL    P+P +  ++  +    +  G  ++     P     +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           +Y  M DCW  + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 283
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 284 PLYEVMLKCWHPKAEMRPSFSELVS 308

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 269
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 270 PLYEVMLKCWHPKAEMRPSFSELVS 294

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 256
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 257 PLYEVMLKCWHPKAEMRPSFSELVS 281

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 261
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVS 286

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 263
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 259
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVS 284

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +     ++  G  L     +P  CP 
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
            +Y++M  CW     MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-QVFLPKPSLCPR 187
           ++  S+VWS+ V LWE+L+   + PF  +    V        YG  + ++ LP PS CP 
Sbjct: 191 FSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAV-------AYGVAMNKLALPIPSTCPE 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
               LM DCW  D   RP+F  I
Sbjct: 242 PFAKLMEDCWNPDPHSRPSFTNI 264

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VT+WE LS  + KP+  +   +V+   E    G  ++     P  CP 
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQ---GKRMEC----PPECPP 566
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y LM DCW      RP F  +   M+
Sbjct: 567 ELYALMSDCWIYKWEDRPDFLTVEQRMR 594

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           Y+ +S+VWS+ V LWEI SL    P+P +  ++       +  G  ++     P     +
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLG-GSPYPGVQMDEDF--CSRLREGMRMRA----PEYSTPE 330
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
           IY +M DCW RD   RP F ++
Sbjct: 331 IYQIMLDCWHRDPKERPRFAEL 352

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VT+WE LS  + KP+  +   +V+   E    G  ++     P  CP 
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQ---GKRMEC----PPECPP 240
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y LM DCW      RP F  +   M+
Sbjct: 241 ELYALMSDCWIYKWEDRPDFLTVEQRMR 268

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D + ++ QS+V+S+ + L+E+++   + P+ H+ N +Q+I      Y   +L       
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMT--GELPYSHINNRDQIIFMVGRGYASPDLSKLYKN- 265
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
             CP+ +  L+ DC K+ +  RP F QI S
Sbjct: 266 --CPKAMKRLVADCVKKVKEERPLFPQILS 293

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
           ++ QS+VWSF V L+E+ + C     P       + +E+ +     +    E    LP P
Sbjct: 194 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAP 253
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             CP ++++LM  CW      RP+F  +
Sbjct: 254 PACPAEVHELMKLCWAPSPQDRPSFSAL 281

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 81  LQDPNLVSI--LGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
           L + N V I   G+ T E+  W       QL   +  +       +D + Y+ QS+V++F
Sbjct: 153 LHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 139 AVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK-PSLCPRDIYDLMCDC 196
            + L+E+++     P+ ++ N +Q+I+    M   G L   L K  S CP+ +  LM +C
Sbjct: 212 GIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKVRSNCPKRMKRLMAEC 265
Query: 197 WKRDQTMRPTFKQIYS 212
            K+ +  RP+F +I +
Sbjct: 266 LKKKRDERPSFPRILA 281

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 81  LQDPNLVSI--LGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
           L + N V I   G+ T E+  W       QL   +  +       +D + Y+ QS+V++F
Sbjct: 153 LHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 139 AVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK-PSLCPRDIYDLMCDC 196
            + L+E+++     P+ ++ N +Q+I+    M   G L   L K  S CP+ +  LM +C
Sbjct: 212 GIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKVRSNCPKRMKRLMAEC 265
Query: 197 WKRDQTMRPTFKQIYS 212
            K+ +  RP+F +I +
Sbjct: 266 LKKKRDERPSFPRILA 281

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 240
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 241 SNCPKAMKRLMAECLKKKRDERPLFPQILA 270

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 237
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 238 SNCPKAMKRLMAECLKKKRDERPLFPQILA 267

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 240
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 241 SNCPKAMKRLMAECLKKKRDERPLFPQILA 270

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 262
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 263 SNCPKAMKRLMAECLKKKRDERPLFPQILA 292

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 263
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 264 SNCPKAMKRLMAECLKKKRDERPLFPQILA 293

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 263
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 264 SNCPKAMKRLMAECLKKKRDERPLFPQILA 293

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D++ Y+ QS+V++F + L+E+++     P+ ++ N +Q+I      Y   +L       
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 255
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
           S CP+ +  LM +C K+ +  RP F QI +
Sbjct: 256 SNCPKAMKRLMAECLKKKRDERPLFPQILA 285

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK- 181
           +D + Y+ QS+V++F + L+E+++     P+ ++ N +Q+I+    M   G L   L K 
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKV 238
Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
            S CP+ +  LM +C K+ +  RP+F +I +
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 269

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGELQVFLPKPS 183
           +   Y+ + +V+S+ + LWE+++  R KPF  +      I  A H      L   LPKP 
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP- 233
Query: 184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLD 225
                I  LM  CW +D + RP+ ++I   M     Y    D
Sbjct: 234 -----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 270

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGELQVFLPKPS 183
           +   Y+ + +V+S+ + LWE+++  R KPF  +      I  A H      L   LPKP 
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP- 232
Query: 184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLD 225
                I  LM  CW +D + RP+ ++I   M     Y    D
Sbjct: 233 -----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
           ++ QS+VWSF V L+E+ + C     P       +  E+ +     +    E    LP P
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP 266
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             CP ++++LM  CW      RP+F  +
Sbjct: 267 PACPAEVHELMKLCWAPSPQDRPSFSAL 294

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF------- 178
           + ++   S+VWSF VTL E+L+ C     P     ++I         G++ V        
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH-----GQMTVTRLVNTLK 257
Query: 179 ----LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
               LP P  CP ++Y LM  CW+   + R +F+ +
Sbjct: 258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF------- 178
           + ++   S+VWSF VTL E+L+ C     P     ++I         G++ V        
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH-----GQMTVTRLVNTLK 245
Query: 179 ----LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
               LP P  CP ++Y LM  CW+   + R +F+ +
Sbjct: 246 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 281

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
           ++ QS+VWSF V L+E+ + C     P       +  E+ +     +    E    LP P
Sbjct: 191 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 250
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             CP ++++LM  CW      RP+F  +
Sbjct: 251 PACPAEVHELMKLCWAPSPQDRPSFSAL 278

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
           ++ QS+VWSF V L+E+ + C     P       +  E+ +     +    E    LP P
Sbjct: 195 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 254
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
             CP ++++LM  CW      RP+F  +
Sbjct: 255 PACPAEVHELMKLCWAPSPQDRPSFSAL 282

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	228
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-29
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-15
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-29
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-16
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-29
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-27
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-16
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-27
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-27
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-27
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-27
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-16
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-27
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	7e-27
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-27
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-27
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-26
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	8e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-26
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-26
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-26
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	8e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-26
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-26
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-26
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-26
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-26
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-26
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-12
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-26
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-26
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-26
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-26
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-26
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-26
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-26
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-26
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-26
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-25
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-25
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-25
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-25
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-25
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-25
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-25
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	8e-25
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-24
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-24
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-24
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-24
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-24
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-24
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-24
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-24
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-14
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-23
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-23
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-15
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-14
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-21
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-21
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-04
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-04
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-04

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  110 bits (278), Expect = 1e-29
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N +VI+              L +P +CP+
Sbjct: 211 KFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECITQGRV-------LERPRVCPK 262

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++YD+M  CW+R+   R   K+IY  +  
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEIYKILHA 291

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCRGDS-------LREIRFL 78
           I R  + +   LG    G++ + E  ++    +K  VAV+  +  +        RE   L
Sbjct: 12  IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           ++LQ  ++V   GVC    P  +V EY  + GDL + L
Sbjct: 72  TNLQHEHIVKFYGVCGDGDPLIMVFEY-MKHGDLNKFL 108

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  111 bits (279), Expect = 2e-29
 Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWEI +  + +P+  L+N + I               L +P  CP 
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAIDCITQGRE-------LERPRACPP 287

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M  CW+R+   R + K +++ ++ 
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDVHARLQA 316

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 73.9 bits (182), Expect = 8e-16
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 13/133 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCRGDS-------LREIRFL 78
           I R  + +   LG    G++ + E  ++  + +K  VAV+  +  S        RE   L
Sbjct: 38  IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
           + LQ  ++V   GVCT  +P  +V EY  + GDL + L S      D        +V   
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEY-MRHGDLNRFLRSHG---PDAKLLAGGEDVAPG 153

Query: 139 AVTLWEILSLCRD 151
            + L ++L++   
Sbjct: 154 PLGLGQLLAVASQ 166

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  109 bits (274), Expect = 6e-29
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++  S++WS+ V LWE+ S    +P+   +N+ V++   +          LP P  CP 
Sbjct: 206 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRNRQV-------LPCPDDCPA 257

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            +Y LM +CW    + RP FK I+S ++
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRLR 285

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 73.4 bits (181), Expect = 8e-16
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
           I    +R +E LG    G++            +   VA++T +  +          E   
Sbjct: 6   ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWS 137
            + LQ PN+V +LGV T +QP  ++  Y    GDL + L      +        ++   +
Sbjct: 66  RARLQHPNVVCLLGVVTKDQPLSMIFSY-CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124

Query: 138 FAVTLWEILSLCRD 151
                 + + L   
Sbjct: 125 L--EPPDFVHLVAQ 136

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  106 bits (267), Expect = 1e-27
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RYT +S+VW++ V LWEI S    +P+  + +E+VI               L  P  CP 
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVIYYVRDGNI-------LACPENCPL 303

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y+LM  CW +    RP+F  I+  ++R
Sbjct: 304 ELYNLMRLCWSKLPADRPSFCSIHRILQR 332

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 17/140 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCRGDS--------LREIRF 77
            PR  +  +  +G    G +       +        VAV+  + ++         RE   
Sbjct: 44  YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL------NSADNLTRDRDRYTC 131
           ++   +PN+V +LGVC   +P  L+ EY    GDL + L              D      
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEY-MAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162

Query: 132 QSNVWSFAVTLWEILSLCRD 151
            S+     ++  E L + R 
Sbjct: 163 VSSPGPPPLSCAEQLCIARQ 182

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  104 bits (263), Expect = 1e-27
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW FAV +WEILS  + +PF  L N+ VI   E           LPKP LCP 
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEKGDR-------LPKPDLCPP 241

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM  CW  D + RP F ++   +  
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSD 270

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           I R  + +   LG    GE+      + + +   VAV+TC+ D         + E   + 
Sbjct: 9   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
           +L  P++V ++G+   E+P W++ME     G+L  +L    N
Sbjct: 69  NLDHPHIVKLIGIIE-EEPTWIIMEL-YPYGELGHYLERNKN 108

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  105 bits (265), Expect = 2e-27
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWS+ VT+WE+++    KP+  +   ++    E           LP+P +C  
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGS-KPYDGIPASEISSILEKGER-------LPQPPICTI 246

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D   RP F+++     +
Sbjct: 247 DVYMIMRKCWMIDADSRPKFRELIIEFSK 275

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 12/106 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFL 78
           +     + ++ LGS   G +       + E     VA++  R  +        L E   +
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
           +S+ +P++  +LG+C       L+ +     G L+ ++    DN+ 
Sbjct: 72  ASVDNPHVCRLLGICL-TSTVQLITQL-MPFGCLLDYVREHKDNIG 115

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  105 bits (263), Expect = 2e-27
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL     KPF  + N  VI   E+          LP P  CP 
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPP 244

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM  CW  D + RP F ++ + +  
Sbjct: 245 TLYSLMTKCWAYDPSRRPRFTELKAQLST 273

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 15/112 (13%)

Query: 13  SMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS- 71
           +MG S +  E     I R  + +   +G    G++        E     VA++TC+  + 
Sbjct: 2   AMGSSTRDYE-----IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 56

Query: 72  -------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
                  L+E   +     P++V ++GV T E P W++ME    LG+L   L
Sbjct: 57  DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL-CTLGELRSFL 106

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  105 bits (263), Expect = 3e-27
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T  S+VWSF V LWEI +L   +P+  L+NEQV++              L KP  CP 
Sbjct: 216 VFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQVLRFVMEGGL-------LDKPDNCPD 267

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +++LM  CW+ +  MRP+F +I S +K 
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKE 296

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 19/134 (14%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
           + R  + +   LG    G +     + +  D    +VA++T    +        L E   
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWS 137
           +      ++V +LGV +  QP  ++ME     GDL  +L       R   R    +N   
Sbjct: 82  MKEFNCHHVVRLLGVVSQGQPTLVIMEL-MTRGDLKSYL-------RSL-RPAMANNPVL 132

Query: 138 FAVTLWEILSLCRD 151
              +L +++ +  +
Sbjct: 133 APPSLSKMIQMAGE 146

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  103 bits (260), Expect = 3e-27
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +Y+ +S+VW+F + +WE+ SL +  P+   TN +V+      +        L +P L   
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASD 232

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
            IY +M  CW      RPTF+Q+ S ++
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLSSIE 260

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           + R  + +L+ LGS   G +              VAV+  +  S       +E + +  L
Sbjct: 5   LKREEITLLKELGSGQFGVVK----LGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL 60

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
             P LV   GVC+ E P ++V EY    G L+ +L S   
Sbjct: 61  SHPKLVKFYGVCSKEYPIYIVTEY-ISNGCLLNYLRSHGK 99

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  104 bits (261), Expect = 7e-27
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWSF + +WE+++    +P+  L+N +V++     +        LP P  CP 
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGE-RPYWELSNHEVMKAINDGFR-------LPTPMDCPS 277

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            IY LM  CW++++  RP F  I S + +
Sbjct: 278 AIYQLMMQCWQQERARRPKFADIVSILDK 306

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE---TEDIELDTEKVAVRTCRGDS--------LREIR 76
           I   C+   + +G+   GE  + +             VA++T +           L E  
Sbjct: 41  IHPSCVTRQKVIGAGEFGE--VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 98

Query: 77  FLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
            +      N++ + GV +  +P  ++ EY  + G L + L   D 
Sbjct: 99  IMGQFSHHNIIRLEGVISKYKPMMIITEY-MENGALDKFLREKDG 142

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  103 bits (258), Expect = 7e-27
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 8/97 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 241

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNL 224
            +Y++M +CW  D  MRP+F Q+   ++    ++ +L
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELHL 278

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQ 82
           +    L++L+ +G    G++M+ +         KVAV+  + D+     L E   ++ L+
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGD-----YRGNKVAVKCIKNDATAQAFLAEASVMTQLR 72

Query: 83  DPNLVSILGVCTGEQPP-WLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
             NLV +LGV   E+   ++V EY    G LV +L       R R R
Sbjct: 73  HSNLVQLLGVIVEEKGGLYIVTEY-MAKGSLVDYL-------RSRGR 111

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  103 bits (259), Expect = 7e-27
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 8/95 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S++W+F V +WEI SL +  P+   TN +  ++             L +P L   
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSETAEHIAQGLR-------LYRPHLASE 248

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS 222
            +Y +M  CW      RPTFK + S +    + +S
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 65.3 bits (160), Expect = 6e-13
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           I    L  L+ LG+   G +              VA++  +  S      + E + + +L
Sbjct: 21  IDPKDLTFLKELGTGQFGVVK----YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 76

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
               LV + GVCT ++P +++ EY    G L+ +L    
Sbjct: 77  SHEKLVQLYGVCTKQRPIFIITEY-MANGCLLNYLREMR 114

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  102 bits (257), Expect = 1e-26
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VT+WE LS  + KP+  +   +V+   E           +  P  CP 
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPP 240

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y LM DCW      RP F  +   M+ 
Sbjct: 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRA 269

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.5 bits (137), Expect = 8e-10
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 28  IPRYCLRVLE-RLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRF 77
           + R  L + +  LG  + G   + +    +      VA++  +  +        +RE + 
Sbjct: 6   LKRDNLLIADIELGCGNFGS--VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 63

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
           +  L +P +V ++GVC  E    LVME  A  G L + L     
Sbjct: 64  MHQLDNPYIVRLIGVCQAE-ALMLVMEM-AGGGPLHKFLVGKRE 105

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  103 bits (258), Expect = 2e-26
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +++ WSF V LWEI SL    P+P  +N++V++              +  P  CP 
Sbjct: 221 IFTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPG 272

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
            +Y +M  CW+     RP F  I   ++  T     ++ 
Sbjct: 273 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 311

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 69.3 bits (170), Expect = 3e-14
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
           +PR  + ++  LG    GE+   +   +  D    +VAV+T             L E   
Sbjct: 27  VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           +S     N+V  +GV     P +++ME     GDL   L
Sbjct: 87  ISKFNHQNIVRCIGVSLQSLPRFILMEL-MAGGDLKSFL 124

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  101 bits (255), Expect = 2e-26
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 232

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y +M  CW+     RP F ++   +  
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRLLRQLAE 261

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           I    L  ++ +GS   G +         L+ +KVA++T R  +      + E   +  L
Sbjct: 5   IDPSELTFVQEIGSGQFGLVH----LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 60

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
             P LV + GVC  + P  LV E+  + G L  +L +   
Sbjct: 61  SHPKLVQLYGVCLEQAPICLVTEF-MEHGCLSDYLRTQRG 99

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  102 bits (257), Expect = 2e-26
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+VWSF V +WE+L+    +P+ ++TN  VI + E  Y        LP P  CP 
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGE-RPYWNMTNRDVISSVEEGYR-------LPAPMGCPH 281

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
            ++ LM DCW +D+  RP F QI S 
Sbjct: 282 ALHQLMLDCWHKDRAQRPRFSQIVSV 307

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 65.4 bits (160), Expect = 8e-13
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           I    + + + +GS   GE+              VA++  +           L E   + 
Sbjct: 46  IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
               PN++ + GV T  +   +V EY  + G L   L
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEY-MENGSLDTFL 141

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  102 bits (256), Expect = 2e-26
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +                L +P  CP 
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRR-------LLQPEYCPD 259

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y++M  CW     MRP+F ++ S +  
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVSRISA 288

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 25  VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIR 76
           V+      +   E +G  H G +      D +      AV++    +        L E  
Sbjct: 19  VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 78

Query: 77  FLSSLQDPNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
            +     PN++S+LG+C   E  P +V+ Y  + GDL   + N   N T
Sbjct: 79  IMKDFSHPNVLSLLGICLRSEGSPLVVLPY-MKHGDLRNFIRNETHNPT 126

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  102 bits (256), Expect = 2e-26
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF V LWE+L+     P+ H+    +                LP+P  CP 
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGA-PPYRHIDPFDLTHFLAQGRR-------LPQPEYCPD 255

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y +M  CW+ D  +RPTF+ +   +++
Sbjct: 256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 26  VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRF 77
           +P  R        +G  H G +   E  D   +  + A+++    +        LRE   
Sbjct: 16  IPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLL 75

Query: 78  LSSLQDPNLVSILGVCTGEQPP-WLVMEYPAQLGDLVQHL-NSADNLT 123
           +  L  PN+++++G+    +    +++ Y    GDL+Q + +   N T
Sbjct: 76  MRGLNHPNVLALIGIMLPPEGLPHVLLPY-MCHGDLLQFIRSPQRNPT 122

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  101 bits (255), Expect = 3e-26
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+ W F VTLWE+ +  + +P+  L   Q++   +     GE    LP+P  CP+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ-EPWIGLNGSQILHKIDK---EGER---LPRPEDCPQ 252

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           DIY++M  CW      RPTF  +  F+  
Sbjct: 253 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 281

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 62.3 bits (152), Expect = 8e-12
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRF 77
           I    LR+LE+LG    G +   E +     T  VAV+  + D           +RE+  
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           + SL   NL+ + GV     P  +V E  A LG L+  L
Sbjct: 75  MHSLDHRNLIRLYGVVLTP-PMKMVTEL-APLGSLLDRL 111

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  101 bits (255), Expect = 3e-26
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E           +  P+ CPR
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEKGER-------MGCPAGCPR 247

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++YDLM  CW  D   RP F  +   ++ 
Sbjct: 248 EMYDLMNLCWTYDVENRPGFAAVELRLRN 276

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 28  IPRYCLRVLER-LGSCHLGEMM--ICETEDIELDTEKVAVRTCRGDS---------LREI 75
           + R  L + ++ LGS + G +     + + +      VAV+  + ++         L E 
Sbjct: 13  LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVK---TVAVKILKNEANDPALKDELLAEA 69

Query: 76  RFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLT 123
             +  L +P +V ++G+C  E    LVME  A+LG L ++L    ++ 
Sbjct: 70  NVMQQLDNPYIVRMIGICEAE-SWMLVMEM-AELGPLNKYLQQNRHVK 115

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  103 bits (258), Expect = 3e-26
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +++ WSF V LWEI SL    P+P  +N++V++              +  P  CP 
Sbjct: 262 IFTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPG 313

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
            +Y +M  CW+     RP F  I   ++  T     ++ 
Sbjct: 314 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 352

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 69.0 bits (169), Expect = 5e-14
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
           +PR  + ++  LG    GE+   +   +  D    +VAV+T             L E   
Sbjct: 68  VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           +S     N+V  +GV     P ++++E     GDL   L
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLEL-MAGGDLKSFL 165

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  104 bits (262), Expect = 3e-26
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL     KPF  + N  VI   E+          LP P  CP 
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPP 619

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM  CW  D + RP F ++ + +  
Sbjct: 620 TLYSLMTKCWAYDPSRRPRFTELKAQLST 648

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.1 bits (156), Expect = 3e-12
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           I R  + +   +G    G++        E     VA++TC+  +        L+E   + 
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
               P++V ++GV T E P W++ME    LG+L   L     
Sbjct: 447 QFDHPHIVKLIGVIT-ENPVWIIMEL-CTLGELRSFLQVRKF 486

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  101 bits (254), Expect = 3e-26
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP 
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPE 237

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y LM  CWK     RPTF  + S ++ 
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           +PR  L+++ERLG+   GE+             KVAV++ +  S      L E   +  L
Sbjct: 10  VPRETLKLVERLGAGQFGEVW----MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           Q   LV +  V T ++P +++ EY  + G LV  L +  
Sbjct: 66  QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPS 102

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  101 bits (254), Expect = 4e-26
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP 
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPE 239

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLD 225
            +Y+LM  CW+ + + RP+F +I+   +      S  D
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 68.0 bits (167), Expect = 7e-14
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           + R  + +  +LG    GE+     +   L    VAV+T + D+      L+E   +  +
Sbjct: 10  MERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEI 66

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           + PNLV +LGVCT E P +++ E+    G+L+ +L   +
Sbjct: 67  KHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYLRECN 104

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  102 bits (255), Expect = 5e-26
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +YT QS+VWS+ VT+WE+++    +P+  L   +V    E           L +P +C  
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGA-EPYAGLRLAEVPDLLEKGER-------LAQPQICTI 244

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D+ +RPTFK++ +   R
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTR 273

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 12/106 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFL 78
                LR L+ LGS   G +       + E     V ++     S           +  +
Sbjct: 10  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
            SL   ++V +LG+C G     LV +Y   LG L+ H+      L 
Sbjct: 70  GSLDHAHIVRLLGLCPGS-SLQLVTQY-LPLGSLLDHVRQHRGALG 113

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  102 bits (255), Expect = 5e-26
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWS+ VT+WE+++    KP+  +   ++    E           LP+P +C  
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGS-KPYDGIPASEISSILEKGER-------LPQPPICTI 246

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           D+Y +M  CW  D   RP F+++     +
Sbjct: 247 DVYMIMVKCWMIDADSRPKFRELIIEFSK 275

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 12/106 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFL 78
           +     + ++ LGS   G +       + E     VA++  R  +        L E   +
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
           +S+ +P++  +LG+C       L+ +     G L+ ++    DN+ 
Sbjct: 72  ASVDNPHVCRLLGICL-TSTVQLITQL-MPFGCLLDYVREHKDNIG 115

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  102 bits (256), Expect = 6e-26
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + LWE++S    +P+  ++N+ VI+  +  Y        LP P  CP 
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGE-RPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM DCW++D+  RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           +    + + + +G+   GE+     +        VA++T +           L E   + 
Sbjct: 42  LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
               PN++ + GV T  +P  +V EY  + G L   L   D 
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEY-MENGSLDSFLRKHDA 142

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  103 bits (258), Expect = 6e-26
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +S+VWSF + L EI++  R  P+P ++N +VI+  E  Y        +P+P  CP 
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPE 412

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
           ++Y++M  CWK     RPTF+ I S 
Sbjct: 413 ELYNIMMRCWKNRPEERPTFEYIQSV 438

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           IPR  L++ ++LG+   GE+             KVAV+T +  S      L E   + +L
Sbjct: 185 IPRESLKLEKKLGAGQFGEVW----MATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL 240

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           Q   LV +  V T ++P +++ E+    G L+  L S +
Sbjct: 241 QHDKLVKLHAVVT-KEPIYIITEF-MAKGSLLDFLKSDE 277

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  101 bits (254), Expect = 6e-26
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT +S+VW+F VT+WEI +     P+P + N ++     H +        L +P  C  
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGM-TPYPGVQNHEMYDYLLHGHR-------LKQPEDCLD 276

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y++M  CW+ D   RPTF  +   +++
Sbjct: 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 15/103 (14%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFL 78
           I R  L + + LG    G +M    +  +  + KVAV+T + D+         L E   +
Sbjct: 31  IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90

Query: 79  SSLQDPNLVSILGVCTGEQP-----PWLVMEYPAQLGDLVQHL 116
                PN++ +LGVC          P +++ +  + GDL  +L
Sbjct: 91  KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF-MKYGDLHTYL 132

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  101 bits (253), Expect = 9e-26
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT  S+VW+F VT+WEI++  +  P+  + N ++                L +P  C  
Sbjct: 215 LYTVHSDVWAFGVTMWEIMTRGQ-TPYAGIENAEIYNYLIGGNR-------LKQPPECME 266

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++YDLM  CW  D   RP+F  +   ++ 
Sbjct: 267 EVYDLMYQCWSADPKQRPSFTCLRMELEN 295

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 16/104 (15%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFL 78
           IP     +   LG    G +   + +  +    KVAV+  + D          LRE   +
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79

Query: 79  SSLQDPNLVSILGVCTGEQP------PWLVMEYPAQLGDLVQHL 116
                P++  ++GV    +       P +++ +  + GDL   L
Sbjct: 80  KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF-MKHGDLHAFL 122

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  102 bits (255), Expect = 9e-26
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +                L +P  CP 
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRR-------LLQPEYCPD 323

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y++M  CW     MRP+F ++ S +  
Sbjct: 324 PLYEVMLKCWHPKAEMRPSFSELVSRISA 352

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 25  VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIR 76
           V+      +   E +G  H G +      D +      AV++    +        L E  
Sbjct: 83  VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 142

Query: 77  FLSSLQDPNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHL-NSADNLT 123
            +     PN++S+LG+C   E  P +V+ Y  + GDL   + N   N T
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY-MKHGDLRNFIRNETHNPT 190

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  101 bits (253), Expect = 2e-25
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  
Sbjct: 281 VYTHQSDVWSFGVLMWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTN 332

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M DCW    + RPTFKQ+   + R
Sbjct: 333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE----KVAVRTCRGDS--------LREI 75
            PR  L + + LG    G++++ E   I+ D       VAV+  + D+        + E+
Sbjct: 78  FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 137

Query: 76  RFLSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSN 134
             +  +    N++++LG CT + P ++++EY A  G+L ++L +        +     + 
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA--RRPPGMEYSYDINR 194

Query: 135 VWSFAVTLWEILSLCRD 151
           V    +T  +++S    
Sbjct: 195 VPEEQMTFKDLVSCTYQ 211

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  101 bits (253), Expect = 2e-25
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF + LWE  SL    P+P+L+N+Q  +  E           LP P LCP 
Sbjct: 291 RYSSESDVWSFGILLWETFSLGA-SPYPNLSNQQTREFVEKGGR-------LPCPELCPD 342

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM  CW  +   RP+F  IY  ++ 
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 12/97 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           +    L + E++G  + GE  +     +  D   VAV++CR           L+E R L 
Sbjct: 111 LNHEDLVLGEQIGRGNFGE--VFSGR-LRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
               PN+V ++GVCT +QP ++VME   Q GD +  L
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMEL-VQGGDFLTFL 203

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  100 bits (251), Expect = 2e-25
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V +WEI +L    P+P +  E++ +  +  +        + KP+ C  
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTN 286

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M DCW    + RPTFKQ+   + R
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 68.5 bits (168), Expect = 8e-14
 Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE----KVAVRTCRGDS--------LREI 75
            PR  L + + LG    G++++ E   I+ D       VAV+  + D+        + E+
Sbjct: 32  FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91

Query: 76  RFLSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSN 134
             +  +    N++++LG CT + P ++++EY A  G+L ++L +        +     + 
Sbjct: 92  EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA--RRPPGMEYSYDINR 148

Query: 135 VWSFAVTLWEILSLCRD 151
           V    +T  +++S    
Sbjct: 149 VPEEQMTFKDLVSCTYQ 165

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  100 bits (251), Expect = 3e-25
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V LWEI +L    P+P +  E++ +  +  +        + KPS C  
Sbjct: 269 IYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPVEELFKLLKEGHR-------MDKPSNCTN 320

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M DCW    + RPTFKQ+   + R
Sbjct: 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
           +PR  L + + LG    G++++ E   ++ D      KVAV+  + D+        + E+
Sbjct: 66  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125

Query: 76  RFLSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSN 134
             +  +    N++++LG CT + P ++++EY A  G+L ++L +      +       + 
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQARRPPGLEYSYNPSHNP 184

Query: 135 VWSFAVTLWEILSLCRD 151
                ++  +++S    
Sbjct: 185 EEQ--LSSKDLVSCAYQ 199

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V LWEI++L    P+P +  E++    +  +        + +P  C  
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGG-NPYPGIPPERLFNLLKTGHR-------MERPDNCSE 279

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y LM  CWK++   RP F  I   +++
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEK 308

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
            PR  L + + LG    G+++      ++       VAV+  + ++        L E   
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           L  +  P+++ + G C+ + P  L++EY A+ G L   L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEY-AKYGSLRGFL 117

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  101 bits (253), Expect = 4e-25
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 413

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +YD+M +CW  D   RPTF Q+   ++ 
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQLEH 442

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQ 82
           +    L++L+ +G    G++M+ +         KVAV+  + D+     L E   ++ L+
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGD-----YRGNKVAVKCIKNDATAQAFLAEASVMTQLR 244

Query: 83  DPNLVSILGVCTGEQPP-WLVMEYPAQLGDLVQHLNSAD 120
             NLV +LGV   E+   ++V EY    G LV +L S  
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEY-MAKGSLVDYLRSRG 282

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  101 bits (254), Expect = 4e-25
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VT+WE LS  + KP+  +   +V+   E           +  P  CP 
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPP 566

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y LM DCW      RP F  +   M+ 
Sbjct: 567 ELYALMSDCWIYKWEDRPDFLTVEQRMRA 595

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 17/88 (19%)

Query: 61  KVAVRTCRGDS--------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDL 112
            VA++  +  +        +RE + +  L +P +V ++GVC  E    LVME  A  G L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEM-AGGGPL 422

Query: 113 VQHLNSADNLTRDRDRYTCQSNVWSFAV 140
            + L         +      SNV     
Sbjct: 423 HKFL-------VGKREEIPVSNVAELLH 443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 98.9 bits (247), Expect = 8e-25
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  
Sbjct: 217 VYTTNSDVWSYGVLLWEIVSLGG-TPYCGMTCAELYEKLPQGYR-------LEKPLNCDD 268

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++YDLM  CW+     RP+F QI   + R
Sbjct: 269 EVYDLMRQCWREKPYERPSFAQILVSLNR 297

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 13/133 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           +    ++  + +G  + G+++    +   L     A++  +  +          E+  L 
Sbjct: 22  LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRM-DAAIKRMKEYASKDDHRDFAGELEVLC 80

Query: 80  SLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
            L   PN++++LG C      +L +EY A  G+L+  L    +   + D     +N  + 
Sbjct: 81  KLGHHPNIINLLGACEHRGYLYLAIEY-APHGNLLDFLRK--SRVLETDPAFAIANSTAS 137

Query: 139 AVTLWEILSLCRD 151
            ++  ++L    D
Sbjct: 138 TLSSQQLLHFAAD 150

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
            YT +S+VWS+ + LWE+ SL    P+P +  + +  +  +  +        +  P   P
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKEGFR-------MLSPEHAP 274

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYS----FMKRSTNY 220
            ++YD+M  CW  D   RPTFKQI       +  STN+
Sbjct: 275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 68.4 bits (168), Expect = 6e-14
 Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 12/135 (8%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
            PR  L   + LG+   G+++      +        VAV+  +  +        + E++ 
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 78  LSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
           LS L +  N+V++LG CT   P  ++ EY    GDL+  L    +               
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEY-CCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 137 SFAVTLWEILSLCRD 151
             A+ L ++LS    
Sbjct: 139 ELALDLEDLLSFSYQ 153

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 99.4 bits (248), Expect = 2e-24
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
            ++DLMC CW+++   RPTF+ + +F
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAF 434

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           IPR  LR+  +LG    GE+           T +VA++T +  +      L+E + +  L
Sbjct: 181 IPRESLRLEVKLGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 236

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           +   LV +  V + E+P ++V EY    G L+  L    
Sbjct: 237 RHEKLVQLYAVVS-EEPIYIVTEY-MSKGSLLDFLKGET 273

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 97.0 bits (242), Expect = 3e-24
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 20/102 (19%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDK-------------PFPHLTNEQVIQNAEHMYYGGE 174
           ++   S+VWSF VTL+E+L+ C                    +T  ++ +  E       
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER--- 269

Query: 175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
               LP+P  CP ++Y LM +CW+ + + RPTF+ +   +K 
Sbjct: 270 ----LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 68.5 bits (168), Expect = 5e-14
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 12/100 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFL 78
             +  L+ +  LG  H G++ +       +   E VAV+  + D+         +EI  L
Sbjct: 28  FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87

Query: 79  SSLQDPNLVSILGVCT--GEQPPWLVMEYPAQLGDLVQHL 116
            +L   +++   G C   G     LVMEY   LG L  +L
Sbjct: 88  RTLYHEHIIKYKGCCEDAGAASLQLVMEY-VPLGSLRDYL 126

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 99.2 bits (247), Expect = 3e-24
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  CP 
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 491

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
            ++DLMC CW+++   RPTF+ + +F
Sbjct: 492 SLHDLMCQCWRKEPEERPTFEYLQAF 517

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.0 bits (148), Expect = 3e-11
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           IPR  LR+  +LG    GE+           T +VA++T +  +      L+E + +  L
Sbjct: 264 IPRESLRLEVKLGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 319

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           +   LV +  V + E+P ++V EY    G L+  L    
Sbjct: 320 RHEKLVQLYAVVS-EEPIYIVTEY-MSKGSLLDFLKGET 356

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 96.2 bits (240), Expect = 3e-24
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           +       ++ WSF  TLWEI S    KP   L +++ +Q  E  +        LP P  
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGD-KPLSALDSQRKLQFYEDRHQ-------LPAPKA 242

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
               + +L+ +C   +   RP+F+ I   +  
Sbjct: 243 AE--LANLINNCMDYEPDHRPSFRAIIRDLNS 272

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 28  IPRYCLRVLERLGSCHLGE----MMICETEDIELDTEKVAVRTCRGDS-------LREIR 76
           I    L   E LG     +    +     +  +L   +V ++                  
Sbjct: 5   IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64

Query: 77  FLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
            +S L   +LV   GVC       LV E+  + G L  +L    N
Sbjct: 65  MMSKLSHKHLVLNYGVCVCGDENILVQEF-VKFGSLDTYLKKNKN 108

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 98.3 bits (245), Expect = 5e-24
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  CP 
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPE 446

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
            +Y+LM  CW+ + + RP+F +I+  
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEIHQA 472

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           + R  + +  +LG    GE+     +   L    VAV+T + D+      L+E   +  +
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEI 273

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
           + PNLV +LGVCT E P +++ E+    G+L+ +L   +
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYLRECN 311

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 96.2 bits (240), Expect = 6e-24
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCP 186
            YT QS+VWSF V LWEI SL    P+P +  +E+  +  +           +  P    
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLKEGTR-------MRAPDYTT 277

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++Y  M DCW  + + RPTF ++   +  
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 13/101 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
            PR  L++ + LG    G+++  +   I+       VAV+  +  +        + E++ 
Sbjct: 24  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83

Query: 78  LSSL-QDPNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHL 116
           L  +    N+V++LG CT    P  +++E+  + G+L  +L
Sbjct: 84  LIHIGHHLNVVNLLGACTKPGGPLMVIVEF-CKFGNLSTYL 123

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 95.8 bits (239), Expect = 6e-24
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 20/102 (19%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCR-------------DKPFPHLTNEQVIQNAEHMYYGGE 174
           ++   S+VWSF VTL E+L+ C                    +T  +++   +       
Sbjct: 205 KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR--- 261

Query: 175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
               LP P  CP ++Y LM  CW+   + R +F+ +    + 
Sbjct: 262 ----LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFL 78
             +  L+ +  LG  H G++ +C    + +   E+VAV++ + +S         +EI  L
Sbjct: 18  FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77

Query: 79  SSLQDPNLVSILGVCT--GEQPPWLVMEYPAQLGDLVQHL 116
            +L   N+V   G+CT  G     L+ME+    G L ++L
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEF-LPSGSLKEYL 116

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFP-HLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
            YT QS+VWS+ + LWEI SL    P+P  L N +  +  +  Y        + +P+  P
Sbjct: 242 VYTVQSDVWSYGILLWEIFSLGL-NPYPGILVNSKFYKLVKDGYQ-------MAQPAFAP 293

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++IY +M  CW  + T RPTF+QI SF++ 
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQE 323

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
            PR  L+  + LG+   G+++      +  +    KVAV+  +  +        + E++ 
Sbjct: 43  FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102

Query: 78  LSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
           +S L    N+V++LG CT   P  ++ EY    GDL+  L     +      +   ++  
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEY-CCYGDLLNFLRRKSRVLETDPAFAIANS-- 159

Query: 137 SFAVTLWEILSLCRD 151
               +  ++L     
Sbjct: 160 --TASTRDLLHFSSQ 172

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 95.1 bits (237), Expect = 2e-23
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
            YT +S+VWS+ + LWEI SL    P+P +  +    +  ++ +        + +P    
Sbjct: 250 IYTIKSDVWSYGILLWEIFSLGV-NPYPGIPVDANFYKLIQNGFK-------MDQPFYAT 301

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +IY +M  CW  D   RP+F  + SF+  
Sbjct: 302 EEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 331

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 17/140 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTCRGDS--------LREIRF 77
            PR  L   + LGS   G++M      I       +VAV+  +  +        + E++ 
Sbjct: 42  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101

Query: 78  LSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL-----NSADNLTRDRDRYTC 131
           ++ L    N+V++LG CT   P +L+ EY    GDL+ +L       +++     ++   
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEY-CCYGDLLNYLRSKREKFSEDEIEYENQKRL 160

Query: 132 QSNVWSFAVTLWEILSLCRD 151
           +       +T  ++L     
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQ 180

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 94.0 bits (234), Expect = 5e-23
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 21/103 (20%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDK--------------PFPHLTNEQVIQNAEHMYYGG 173
           +++  S+VWSF V L+E+ +                       +    +I+  ++     
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN----N 279

Query: 174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
                LP+P  CP +IY +M +CW  +   RP+F+ +   + +
Sbjct: 280 GR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 72.4 bits (178), Expect = 3e-15
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 9   NISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTC 67
           N+           + D        L+ L++LG  + G + +C      +   E VAV+  
Sbjct: 19  NLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 78

Query: 68  RGDS-------LREIRFLSSLQDPNLVSILGVCT--GEQPPWLVMEYPAQLGDLVQHL 116
           +  +        REI  L SLQ  N+V   GVC   G +   L+MEY    G L  +L
Sbjct: 79  QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY-LPYGSLRDYL 135

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 93.1 bits (232), Expect = 6e-23
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 21/103 (20%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDK--------------PFPHLTNEQVIQNAEHMYYGG 173
           +++  S+VWSF V L+E+ +                       +    +I+  ++     
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-- 250

Query: 174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
                LP+P  CP +IY +M +CW  +   RP+F+ +   + +
Sbjct: 251 -----LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 70.8 bits (174), Expect = 8e-15
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS-------LREIRFLS 79
                L+ L++LG  + G + +C      +   E VAV+  +  +        REI  L 
Sbjct: 7   FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66

Query: 80  SLQDPNLVSILGVCT--GEQPPWLVMEYPAQLGDLVQHL 116
           SLQ  N+V   GVC   G +   L+MEY    G L  +L
Sbjct: 67  SLQHDNIVKYKGVCYSAGRRNLKLIMEY-LPYGSLRDYL 104

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 91.3 bits (227), Expect = 4e-22
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 20/102 (19%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCR-------------DKPFPHLTNEQVIQNAEHMYYGGE 174
            ++ QS+VWSF V L+E+ + C                        ++++  E       
Sbjct: 206 IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR--- 262

Query: 175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
               LP P  CP ++++LM  CW      RP+F  +   +  
Sbjct: 263 ----LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 300

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 69.3 bits (170), Expect = 4e-14
 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 9   NISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTC 67
           +      Q Y C++  +       L+ + +LG  + G + +C      +     VAV+  
Sbjct: 3   HHHHHHAQLYACQDPTI--FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL 60

Query: 68  RGDS-------LREIRFLSSLQDPNLVSILGVC--TGEQPPWLVMEYPAQLGDLVQHL 116
           +           REI+ L +L    +V   GV    G Q   LVMEY    G L   L
Sbjct: 61  QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY-LPSGCLRDFL 117

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 89.2 bits (221), Expect = 3e-21
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYGGELQVFLPKPSLCP 186
            YT QS+VWSF V LWEI SL    P+P +  +E+  +  +           +  P    
Sbjct: 271 VYTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLKEGTR-------MRAPDYTT 322

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++Y  M DCW  + + RPTF ++   +  
Sbjct: 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 13/101 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELD--TEKVAVRTCRGDS--------LREIRF 77
            PR  L++ + LG    G+++  +   I+       VAV+  +  +        + E++ 
Sbjct: 19  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78

Query: 78  LSSLQD-PNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHL 116
           L  +    N+V++LG CT    P  +++E+  + G+L  +L
Sbjct: 79  LIHIGHHLNVVNLLGACTKPGGPLMVIVEF-CKFGNLSTYL 118

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
           +D + Y+ QS+V++F + L+E++      P+ ++ N +Q+I+       G          
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELM--TGQLPYSNINNRDQIIEMVGR---GSLSPDLSKVR 251

Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           S CP+ +  LM +C K+ +  RP+F +I + ++ 
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 11/70 (15%)

Query: 61  KVAVRTCRGDS---------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGD 111
            VAV+     +           E+  L   +  N++  +G  T      +V ++  +   
Sbjct: 48  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQW-CEGSS 105

Query: 112 LVQHLNSADN 121
           L  HL++++ 
Sbjct: 106 LYHHLHASET 115

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 83.9 bits (208), Expect = 1e-19
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+VWS+ V LWE+L    + PF  +    V             ++ LP PS CP 
Sbjct: 190 MFSKGSDVWSYGVLLWELL--TGEVPFRGIDGLAVAYGV------AMNKLALPIPSTCPE 241

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
               LM DCW  D   RP+F  I   + 
Sbjct: 242 PFAKLMEDCWNPDPHSRPSFTNILDQLT 269

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 12/70 (17%)

Query: 60  EKVAVRTCRGDS-----------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
           ++VAV+  R D             +E +  + L+ PN++++ GVC  E    LVME+ A+
Sbjct: 31  DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF-AR 89

Query: 109 LGDLVQHLNS 118
            G L + L+ 
Sbjct: 90  GGPLNRVLSG 99

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 117 NSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ 176
             + +   D+  ++  S+V++     +E+    R+ PF     E +I         G   
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELH--AREWPFKTQPAEAIIWQMGT----GMKP 261

Query: 177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             L +     ++I D++  CW  +Q  RPTF ++   +++
Sbjct: 262 N-LSQIG-MGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 10/65 (15%)

Query: 61  KVAVRTCRGDS---------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGD 111
           +VA+R    +           RE+      +  N+V  +G C       ++     +   
Sbjct: 57  EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL-CKGRT 115

Query: 112 LVQHL 116
           L   +
Sbjct: 116 LYSVV 120

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 122 LTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK 181
           +  + + YT +++ +SFA+ L+ IL    + PF   +  + I+    +   G        
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTIL--TGEGPFDEYSYGK-IKFINMIREEGLR---PTI 251

Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           P  CP  + +++  CW  D   RP F  I   +  
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 72  LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
            RE+  +S+L  PN+V + G+     PP +VME+    GDL   L    +
Sbjct: 71  QREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEF-VPCGDLYHRLLDKAH 117

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
               +S+V+SF V LWE+      +P+ +L   QV+               L  P     
Sbjct: 215 PSNEKSDVYSFGVILWELA--TLQQPWGNLNPAQVVAAVGFKCKR------LEIPRNLNP 266

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +  ++  CW  +   RP+F  I   ++ 
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRP 295

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 72  LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
           LRE+  +  L+ PN+V  +G  T      +V EY    G L + L+ +  
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY-LSRGSLYRLLHKSGA 130

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 78.8 bits (195), Expect = 8e-18
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
           D     +++WSFAV LWE++   R+ PF  L+N ++              +    P    
Sbjct: 186 DTNRRSADMWSFAVLLWELV--TREVPFADLSNMEIGMKV------ALEGLRPTIPPGIS 237

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             +  LM  C   D   RP F  I   +++
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEK 267

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 7/60 (11%)

Query: 73  REIRFLSSLQDPNLVSILGVCTGEQPP----WLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
            E   L     PN++ +LG C    PP     L+  +    G L   L+   N   D+ +
Sbjct: 56  EECPRLRIFSHPNVLPVLGACQ--SPPAPHPTLITHW-MPYGSLYNVLHEGTNFVVDQSQ 112

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--NEQVIQNAEHMYYGGELQVFLPKPSLC 185
            Y  + +V+SF + L EI+   R    P           N                P  C
Sbjct: 198 SYDEKVDVFSFGIVLCEIIG--RVNADPDYLPRTMDFGLNVRGFL-------DRYCPPNC 248

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           P   + +   C   D   RP+F ++  +++
Sbjct: 249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 17/104 (16%)

Query: 28  IPRYCLRVLERLGSCHLGEM---MICETEDIELDTEKVAVRTCRGDS-------LREIRF 77
                L   E LG    G+       ET       E + ++             L+E++ 
Sbjct: 7   FRPSDLIHGEVLGKGCFGQAIKVTHRET------GEVMVMKELIRFDEETQRTFLKEVKV 60

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
           +  L+ PN++  +GV   ++    + EY    G L   + S D+
Sbjct: 61  MRCLEHPNVLKFIGVLYKDKRLNFITEYIKG-GTLRGIIKSMDS 103

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 76.2 bits (188), Expect = 9e-17
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            Y+ + +V+S+ + LWE++   R KPF  +             + G      P     P+
Sbjct: 179 NYSEKCDVFSWGIILWEVI--TRRKPFDEIGGPA--FRIMWAVHNGTR---PPLIKNLPK 231

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            I  LM  CW +D + RP+ ++I   M  
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 8/68 (11%)

Query: 60  EKVAVRTCRGDS-----LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQ 114
           + VA++    +S     + E+R LS +  PN+V + G C    P  LVMEY A+ G L  
Sbjct: 32  KDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY-AEGGSLYN 88

Query: 115 HLNSADNL 122
            L+ A+ L
Sbjct: 89  VLHGAEPL 96

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 120 DNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDK--------PFPHLTNEQVIQNAEHMYY 171
           ++L R+  +    ++++SF + LWE+   C           P+  L       + E M  
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMRE 277

Query: 172 G---GELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF---MKRSTNYK 221
                +L+   P       C R +  LM +CW  +   R T  ++      M  S + K
Sbjct: 278 IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 16/106 (15%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDK--------PFPHLTNEQVIQNAEHMYYGGELQ 176
           D      + ++W+F + LWE+               PF  +       + E M     + 
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP--SFEDMRKVVCVD 253

Query: 177 VFLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
              P              +  LM +CW ++ + R T  +I   + +
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 18/109 (16%)

Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDK--------PFPHLTNEQVIQNAE 167
           L+ + N+         ++++++  +  WEI   C           P+  L       + E
Sbjct: 223 LDDSINM--KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP--SVE 278

Query: 168 HMYYG-GELQVFLPKPSL-----CPRDIYDLMCDCWKRDQTMRPTFKQI 210
            M     E ++    P+        R +  +M +CW  +   R T  +I
Sbjct: 279 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 19/120 (15%)

Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA-------EH 168
           L  A N  RD      + ++++  + LWE+ S C     P        +         E 
Sbjct: 205 LEGAINFQRD---AFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261

Query: 169 MYYGGELQVFLPK-PSLCPRD-----IYDLMCDCWKRDQTMRPTFKQIY---SFMKRSTN 219
           M      +   P       +      + + + +CW  D   R +   +    + M+R TN
Sbjct: 262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTN 321

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 17/111 (15%)

Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDK-----------PF-----PHLTN 159
           L  A NL RD +    Q ++++  +  WEI   C D             F      H T 
Sbjct: 200 LEGAVNL-RDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTF 258

Query: 160 EQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
           E +           +      + SL  R + + + DCW +D   R T +  
Sbjct: 259 EDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA 309

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 20/119 (16%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 112 LVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAE 167
            ++ ++S+    + + + + +S+VWS    L+ +       PF  + N+      I +  
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPN 284

Query: 168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRSTNYKSNL 224
           H             P +  +D+ D++  C KRD   R +  ++ +  +++  T+  + +
Sbjct: 285 HEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 35/234 (14%), Positives = 59/234 (25%), Gaps = 71/234 (30%)

Query: 30  RYCLRVLERLGSCHLGEM-MICETEDIELDTEKVAVRTCRGDS----------LREIRFL 78
           RY  R+L   G           +  D  LD + VA+                 L     L
Sbjct: 32  RY--RLLIFHGG---VPPLQFWQALDTALDRQ-VALTFVDPQGVLPDDVLQETLSRTLRL 85

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEY---------------PAQLGDLVQHLNSA---- 119
           S +  P +  +L V        +V E+               P      +Q L +A    
Sbjct: 86  SRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAA 145

Query: 120 ------------DNLTRDRD------------RYTCQSNVWSFAVTLWEILSLCRDKPFP 155
                         +    D                Q ++     +L+ +L      P P
Sbjct: 146 HRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRW--PLP 203

Query: 156 HLTNEQVIQNAEHMYYGGELQVFLPKPS----LCPRDIYDLMCDCWKRDQTMRP 205
                  +  AE      +      +P+      P  I  +     + D  +R 
Sbjct: 204 EAGVRSGLAPAER-----DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRS 252

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 20/119 (16%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 112 LVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAE 167
            ++ ++S+    + + + + +S+VWS    L+ +       PF  + N+      I +  
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPN 237

Query: 168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRSTNYKSNL 224
           H             P +  +D+ D++  C KRD   R +  ++ +  +++  T+  + +
Sbjct: 238 HEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 287

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 20/114 (17%), Positives = 49/114 (42%), Gaps = 17/114 (14%)

Query: 112 LVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAE 167
            ++ ++S+    + + + + +S+VWS    L+ +       PF  + N+      I +  
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPN 256

Query: 168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRSTN 219
           H             P +  +D+ D++  C KRD   R +  ++ +  +++  T+
Sbjct: 257 HEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 20/99 (20%)

Query: 21  REGDVVPIPRYCLRVLERLGSCHLGEM-MICETEDIELDTEKVAVRTCR--GDS------ 71
             GD+V   +Y   V   +     G +  I    D  ++   V ++     GD+      
Sbjct: 73  NPGDIVA-GQY--EVKGCIAH---GGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMA 126

Query: 72  LREIRFLSSLQDPNLVSIL-----GVCTGEQPPWLVMEY 105
           + E +FL+ +  P++V I          G+   ++VMEY
Sbjct: 127 MAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLT 123
           ++RE+  L  LQ  N++ +  V        L+ EY     DL ++++   +++
Sbjct: 80  AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN--DLKKYMDKNPDVS 130

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++REI  L  L  PN+VS++ V   E+   LV E+  +  DL + L+ 
Sbjct: 66  AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK--DLKKVLDE 111

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 42.1 bits (100), Expect = 5e-05
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++REI  L  L  PN+V +L V   E   +LV E+  Q  DL + +++
Sbjct: 49  AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ--DLKKFMDA 94

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYT 130
           ++REI  +  L+  N+V +  V   E    LV E+     DL ++++       +  R  
Sbjct: 50  AIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN--DLKKYMD--SRTVGNTPRGL 105

Query: 131 CQSNVWSFAVTLWEILSLC-------RD-KP 153
             + V  F   L + L+ C       RD KP
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKP 136

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.7 bits (99), Expect = 7e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           +LREI  L  L+  N+V +  V   ++   LV E+  Q  DL ++ +S
Sbjct: 48  ALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ--DLKKYFDS 93

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++REI  L  L+  N+V +  V   ++   LV E+  Q  DL + L+ 
Sbjct: 47  TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ--DLKKLLDV 92

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)

Query: 58  DTEKVAVRTCRGDS-------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLG 110
           D  KVA++    +S         EI  LS  + P+LVS++G C       L+ +Y    G
Sbjct: 62  DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN-G 120

Query: 111 DLVQHL 116
           +L +HL
Sbjct: 121 NLKRHL 126

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 58  DTEKVAVRTCRGD-----SLREIRFLSSLQDPNLVSILGVCTGEQPP--WLVMEY 105
           D +  A++   G      + REI  L  L+ PN++S+  V         WL+ +Y
Sbjct: 47  DDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++RE+  L  L+  N+V++  +   E+   LV EY  +  DL Q+L+ 
Sbjct: 47  AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK--DLKQYLDD 92

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPW--------LVMEY 105
           +LREI+ L  L+  N+V+++ +C  +  P+        LV ++
Sbjct: 63  ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF 105

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%)

Query: 68  RGDSLREIRFLSSLQDPNLVSILGVCTGEQPP----WLVMEYPAQLGDLVQHLNSADNLT 123
           R ++ RE         PN++ ++  C  E+      WL++ +  + G L   +     L 
Sbjct: 70  REEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF-FKRGTLWNEIE---RLK 125

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH 156
              +  T    +    + +   L     K + H
Sbjct: 126 DKGNFLTEDQ-ILWLLLGICRGLEAIHAKGYAH 157

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           ++REI+ L  L+  NLV++L VC  ++  +LV E+
Sbjct: 71  AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           +LREIR L  L+ PNLV++L V   ++   LV EY
Sbjct: 49  ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 71  SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
           +LREI+ L  L  PN++ +L     +    LV ++
Sbjct: 59  ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 60  EKVAVRTCRGDSL--------REIRFLSSLQDPNLVSILGV------CTGEQPPWLVMEY 105
           E+VA++ CR +           EI+ +  L  PN+VS   V            P L MEY
Sbjct: 40  EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99

Query: 106 PAQLGDLVQHLNSADN 121
             + GDL ++LN  +N
Sbjct: 100 -CEGGDLRKYLNQFEN 114

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 17/87 (19%)

Query: 30  RYCLRVLERLGSCHLGEM-MICETEDIELDTEKVAVRTCRGDSL----------REIRFL 78
           RY  +++++LG    G M  +   ED  L+ + VA++                 RE+   
Sbjct: 12  RY--KIVDKLGG---GGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNS 65

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEY 105
           S L   N+VS++ V   +   +LVMEY
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEY 92

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 12/77 (15%)

Query: 58  DTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPP-----WLVMEYPAQLGDL 112
           +      R      LREI  L+ L   ++V +L +   +        ++V+E      D 
Sbjct: 91  EDLIDCKRI-----LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS--DF 143

Query: 113 VQHLNSADNLTRDRDRY 129
            +   +   LT    + 
Sbjct: 144 KKLFRTPVYLTELHIKT 160

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 72  LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
            +EI+ ++  Q  NLV +LG  +      LV  Y    G L+  L
Sbjct: 78  DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY-MPNGSLLDRL 121

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 56  ELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
           ++    +     R D ++EI  L  L  PN++        +    +V+E  A  GDL + 
Sbjct: 64  KVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL-ADAGDLSRM 122

Query: 116 LNSADNLTRDRDRYTCQSNVWSFAV 140
           +       + + R   +  VW + V
Sbjct: 123 IKHF----KKQKRLIPERTVWKYFV 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	228
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.98
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.98
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.98
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
3uqc_A	286	Probable conserved transmembrane protein; structur	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3niz_A	311	Rhodanese family protein; structural genomics, str	99.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.95
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.95
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.95
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.95
3bhy_A	283	Death-associated protein kinase 3; death associate	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.95
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.95
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.95
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.94
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.94
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.94
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.94
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.93
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.93
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.93
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.93
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.93
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.92
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.92
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.92
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.92
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.91
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.91
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.91
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.91
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.88
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.85
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.78
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.2
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.98
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.8
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.37
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.26
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.39
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.69
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.61
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.87
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.88
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	92.46
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	92.26
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.1
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	91.7
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.19
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	90.15
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	89.03
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	87.46
3ats_A	357	Putative uncharacterized protein; hypothetical pro	84.84

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.5e-42  Score=278.21  Aligned_cols=189  Identities=32%  Similarity=0.603  Sum_probs=160.1

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+|++++|.+.+.||+|+||.||+|.+....  .++..||||.++       ++|.+|+++|++++|||||+++|++.+
T Consensus         7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~   86 (299)
T 4asz_A            7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE   86 (299)
T ss_dssp             CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             hcccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            35789999999999999999999999986321  146889999984       568999999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------------------Cccc----------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------------------DNLT----------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------------r~l~----------  123 (228)
                      .+..+|||||| ++|+|.++|+..                                          |||+          
T Consensus        87 ~~~~~lV~Ey~-~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           87 GDPLIMVFEYM-KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSEEEEEECC-TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             CCEEEEEEEcC-CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            99999999999 999999999642                                          5555          


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          +....|+.++|||||||++|||+|. |..||.+.+..++...+.
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~-G~~Pf~~~~~~~~~~~i~  244 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY-GKQPWYQLSNNEVIECIT  244 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHH
Confidence                                                4456799999999999999999985 368999999888888776


Q ss_pred             HhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                      .+.       .++.|..+++++.+|+.+||+.||++|||+.+|++.|+.+.+..+
T Consensus       245 ~~~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p  292 (299)
T 4asz_A          245 QGR-------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP  292 (299)
T ss_dssp             HTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             cCC-------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence            643       455678899999999999999999999999999999999954443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.2e-42  Score=280.21  Aligned_cols=187  Identities=29%  Similarity=0.530  Sum_probs=158.6

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILG   91 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g   91 (228)
                      ..+.++|+.+++++.+.||+|+||.||+|.+...  ...++.||||.++        ++|.+|+.++++++|||||+++|
T Consensus        17 ~~~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g   96 (308)
T 4gt4_A           17 QAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG   96 (308)
T ss_dssp             --CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCCcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcce
Confidence            3456789999999999999999999999998531  1156889999984        56899999999999999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---  123 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---  123 (228)
                      ++.+++..+|||||| ++|+|.++|...                                             |||+   
T Consensus        97 ~~~~~~~~~lV~Ey~-~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~N  175 (308)
T 4gt4_A           97 VVTKDQPLSMIFSYC-SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN  175 (308)
T ss_dssp             EECSSSSCEEEEECC-SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEECCEEEEEEEcC-CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccc
Confidence            999999999999999 999999999531                                             4444   


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 +....|+.++|||||||++|||+|+ |..||.+.+..
T Consensus       176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~-g~~Pf~~~~~~  254 (308)
T 4gt4_A          176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQ  254 (308)
T ss_dssp             EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCTTTTCCHH
T ss_pred             eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhC-CCCCCCCCCHH
Confidence                                                       4456789999999999999999985 36899999988


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++...+..+.       .++.|..++.++.+|+.+||+.||.+||||.+|+++|+.+
T Consensus       255 ~~~~~i~~~~-------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          255 DVVEMIRNRQ-------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHcCC-------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            8887776532       4566888999999999999999999999999999999865

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=278.86  Aligned_cols=190  Identities=31%  Similarity=0.567  Sum_probs=162.4

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...+.|+++++.+.+.||+|+||.||+|.++..  ..++..||||.++       ++|.+|+++|++++|||||+++|++
T Consensus        33 ~~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~  112 (329)
T 4aoj_A           33 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC  112 (329)
T ss_dssp             CCSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhhcccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            345678889999999999999999999998632  1146889999994       5689999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC--------------------------------------------Cccc------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA--------------------------------------------DNLT------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------------------r~l~------  123 (228)
                      .+.+..+|||||| ++|+|.++|+..                                            |||+      
T Consensus       113 ~~~~~~~lV~Ey~-~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl  191 (329)
T 4aoj_A          113 TEGRPLLMVFEYM-RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV  191 (329)
T ss_dssp             CSSSSEEEEEECC-TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             EECCEEEEEEEcC-CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE
Confidence            9998999999999 999999988642                                            4555      


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                              +....|+.++|||||||++|||+|. |..||.+.+..++.
T Consensus       192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~-G~~Pf~~~~~~~~~  270 (329)
T 4aoj_A          192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY-GKQPWYQLSNTEAI  270 (329)
T ss_dssp             ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTT-SCCTTCSSCHHHHH
T ss_pred             CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcC-CCCCCCCCCHHHHH
Confidence                                                    4456789999999999999999995 36899999988888


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                      ..+..+.       +++.|..+++++.+|+.+||+.||++||||.+|+++|+.+.+..
T Consensus       271 ~~i~~g~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          271 DCITQGR-------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHHHHTC-------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHcCC-------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            7776543       45678889999999999999999999999999999999995443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5e-40  Score=266.65  Aligned_cols=189  Identities=22%  Similarity=0.343  Sum_probs=152.9

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...|+|+.+++.+.+.||+|+||.||+|.+.      ..||||.++         +.|.+|+.++++++|||||+++|++
T Consensus        28 ~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~  101 (307)
T 3omv_A           28 SYYWEIEASEVMLSTRIGSGSFGTVYKGKWH------GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM  101 (307)
T ss_dssp             -CCCBCCTTSCCEEEECCCCSSSEEEEEESS------SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CcCcEEcHHHeEEeeEEeeCCCcEEEEEEEC------CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3579999999999999999999999999864      258999884         5689999999999999999999988


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                      .+ +..+|||||| ++|+|.++|+..                              |||+                    
T Consensus       102 ~~-~~~~iVmEy~-~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  179 (307)
T 3omv_A          102 TK-DNLAIVTQWC-EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA  179 (307)
T ss_dssp             CS-SSCEEEEECC-SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred             EC-CeEEEEEEcC-CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCc
Confidence            65 4689999999 999999999653                              5555                    


Q ss_pred             --------------------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH-HHhhhCC
Q psy796          124 --------------------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA-EHMYYGG  173 (228)
Q Consensus       124 --------------------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~-~~~~~~~  173 (228)
                                                +   ....|+.++|||||||++|||+|  |..||.+.+.......+ .....  
T Consensus       180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt--g~~Pf~~~~~~~~~~~~~~~~~~--  255 (307)
T 3omv_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT--GELPYSHINNRDQIIFMVGRGYA--  255 (307)
T ss_dssp             BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH--SSCTTTTCCCHHHHHHHHHTTCC--
T ss_pred             eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH--CCCCCCCCChHHHHHHHHhcCCC--
Confidence                                      1   23468999999999999999999  67999987765544333 22211  


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCCCC
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNL  224 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~~~  224 (228)
                       .+.....+..+++++.+|+.+||+.+|++||||.+|+++|+.+.+..+++
T Consensus       256 -~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk~  305 (307)
T 3omv_A          256 -SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI  305 (307)
T ss_dssp             -CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC-
T ss_pred             -CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCCC
Confidence             11112345678999999999999999999999999999999997665554

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.2e-39  Score=269.40  Aligned_cols=186  Identities=28%  Similarity=0.536  Sum_probs=155.0

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCC-CCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQD-PNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h-~niv~~~g~   92 (228)
                      +.|+|++++|++++.||+|+||.||+|.+....  ...+.||||.++        ..+.+|+++|.++.| ||||+++|+
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            468999999999999999999999999987422  135789999984        458899999999965 899999999


Q ss_pred             eeCC-CCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---
Q psy796           93 CTGE-QPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---  123 (228)
Q Consensus        93 ~~~~-~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---  123 (228)
                      +... ++++|||||| ++|+|.++|+..                                             |||+   
T Consensus       137 ~~~~~~~~~iV~Ey~-~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~N  215 (353)
T 4ase_A          137 CTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  215 (353)
T ss_dssp             ECCTTSCCEEEEECC-TTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEecCCEEEEEEEcC-CCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccc
Confidence            8664 5789999999 999999998641                                             5555   


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 +....|+.++|||||||++|||+|. |..||.+.+..
T Consensus       216 ILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~-G~~Pf~~~~~~  294 (353)
T 4ase_A          216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKID  294 (353)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-SCCSSTTCCCS
T ss_pred             eeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC-CCCCCCCCCHH
Confidence                                                       4456789999999999999999985 36899887654


Q ss_pred             -HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          161 -QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                       .+...+..+.       +++.|..+++++++++.+||+.||.+|||+.+|+++|+.+.
T Consensus       295 ~~~~~~i~~g~-------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          295 EEFCRRLKEGT-------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             HHHHHHHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC-------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence             4444454432       45678889999999999999999999999999999999983

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.7e-39  Score=259.48  Aligned_cols=187  Identities=12%  Similarity=0.189  Sum_probs=160.0

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ....++|+++++||+|+||.||++....   +++.||||++.          ..+.+|+++|++++|||||++++++.++
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~  104 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD  104 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECC---CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            3445689999999999999999999876   78999999984          3478999999999999999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +..+|||||| ++|+|.++|...                             ||||                        
T Consensus       105 ~~~yivmEy~-~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          105 EKLYFGLSYA-KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             SEEEEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CEEEEEEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            9999999999 999999998654                             5666                        


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +.+..|+.++||||+||++|||++  |..||.+.+..++...+...        .+..
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~--G~~PF~~~~~~~~~~~i~~~--------~~~~  253 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA--GLPPFRAGNEGLIFAKIIKL--------EYDF  253 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHT--------CCCC
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCC
Confidence                                  345578999999999999999999  67999998888888877654        3456


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccCCCCCcc
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYKSNLDLR  227 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~~~~~~~  227 (228)
                      |..+++++++|+.+||+.||.+|||+++++.+-.-. +.+..++||.
T Consensus       254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~  300 (311)
T 4aw0_A          254 PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE  300 (311)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred             CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHH
Confidence            778999999999999999999999999987654444 5666677663

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.7e-38  Score=258.72  Aligned_cols=172  Identities=19%  Similarity=0.396  Sum_probs=145.1

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      +.++|++++.||+|+||.||+|+...   +++.||||.++         +.+.+|++++++++|||||++++++.+++.+
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~   98 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTE---DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSL   98 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETT---TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEE
Confidence            45689999999999999999999876   78999999983         4588999999999999999999999999999


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +|||||| ++|+|.++|...                               ||||                         
T Consensus        99 yiVmEy~-~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A           99 YIVMDYC-EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             EEEEECC-TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             EEEEeCC-CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            9999999 999999999643                               5665                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         +.+..|+.++|||||||++|||++  |..||.+.+..++...+....       ..+.+..
T Consensus       178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt--G~~PF~~~~~~~~~~~i~~~~-------~~~~~~~  248 (350)
T 4b9d_A          178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT--LKHAFEAGSMKNLVLKIISGS-------FPPVSLH  248 (350)
T ss_dssp             HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHTC-------CCCCCTT
T ss_pred             CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCcCHHHHHHHHHcCC-------CCCCCcc
Confidence                               556789999999999999999999  679999988888877776542       2345677


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.++++|+.+||+.||.+|||+.++++|
T Consensus       249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          249 YSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            89999999999999999999999999874

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.2e-37  Score=255.86  Aligned_cols=173  Identities=17%  Similarity=0.270  Sum_probs=149.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .+.|++.+.||+|+||.||+|....   +++.||||+++       +.+.+|+++|++++|||||++++++.+++.++||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv  149 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  149 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECC---CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4568999999999999999999876   78999999983       5588999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||| ++|+|.+++...                            ||||                               
T Consensus       150 mEy~-~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  228 (346)
T 4fih_A          150 MEFL-EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  228 (346)
T ss_dssp             ECCC-TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             EeCC-CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence            9999 999999988654                            6666                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   +....|+.++|||||||++|||++  |..||.+.+..+....+....     .+.+..+..++++++
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~--G~~PF~~~~~~~~~~~i~~~~-----~~~~~~~~~~s~~~~  301 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD--GEPPYFNEPPLKAMKMIRDNL-----PPRLKNLHKVSPSLK  301 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSS-----CCCCSCGGGSCHHHH
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCcCHHHHHHHHHcCC-----CCCCCccccCCHHHH
Confidence                         456679999999999999999999  679999988888777765432     113334567899999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +|+.+||+.||++|||+.++++|
T Consensus       302 dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          302 GFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHhcC
Confidence            99999999999999999999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.3e-37  Score=251.89  Aligned_cols=178  Identities=13%  Similarity=0.200  Sum_probs=150.3

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchHH--HHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeec
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGD--SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~~--~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      ..+.+++.+.||+|+||.||+|+...   +++.||||.++.+  ..+|+.++++++|||||++++++.+++..+||||||
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~---~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQ---TGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             chhheEeCcEeccCCCeEEEEEEECC---CCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            34567788899999999999999876   7899999999633  468999999999999999999999999999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       ++|+|.++|...                             ||||                                  
T Consensus       133 -~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~  211 (336)
T 4g3f_A          133 -EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL  211 (336)
T ss_dssp             -TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred             -CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence             999999998654                             5555                                  


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      +.+..|+.++|||||||++|||++  |..||.+.+...+...+....     .+....|..+++
T Consensus       212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt--G~~Pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~s~  284 (336)
T 4g3f_A          212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN--GCHPWTQYFRGPLCLKIASEP-----PPIREIPPSCAP  284 (336)
T ss_dssp             --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSSTTTCCSCCHHHHHHSC-----CGGGGSCTTSCH
T ss_pred             cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH--CcCCCCCCCHHHHHHHHHcCC-----CCchhcCccCCH
Confidence                            345578999999999999999999  679998877766666655431     111234678999


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++.+++.+||+.||.+|||+.|++++|...
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999999887

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.3e-37  Score=250.51  Aligned_cols=175  Identities=19%  Similarity=0.289  Sum_probs=145.7

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .+++++|++.+.||+|+||.||+|+.......++.||+|.++         ..+.+|++++++++|||||++++++.+++
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            345678999999999999999999875433367899999984         34788999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++||||| ++|+|.++|.+.                             ||||                         
T Consensus       100 ~~~ivmEy~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          100 KLYLILDFL-RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EEEEEECCC-TTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEEEEEcC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            999999999 999999998654                             5665                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         +.+..|+.++|||||||++|||++  |..||.+.+..++...+...        ....|..
T Consensus       179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt--G~~PF~~~~~~~~~~~i~~~--------~~~~p~~  248 (304)
T 3ubd_A          179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT--GTLPFQGKDRKETMTMILKA--------KLGMPQF  248 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTT
T ss_pred             CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh--CCCCCCCcCHHHHHHHHHcC--------CCCCCCc
Confidence                               556689999999999999999999  67999999888888777654        3456788


Q ss_pred             CcHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps-----~~~v~~  212 (228)
                      +++++++|+.+||+.||++|||     ++++++
T Consensus       249 ~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            9999999999999999999998     467665

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=255.88  Aligned_cols=173  Identities=17%  Similarity=0.270  Sum_probs=150.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .+.|++.+.||+|+||.||+|....   +++.||||.+.       +.+.+|+.+|+.++|||||++++++.+++.+|||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV  226 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  226 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence            4569999999999999999999876   78999999983       5689999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||| ++|+|.+++...                            ||||                               
T Consensus       227 mEy~-~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  305 (423)
T 4fie_A          227 MEFL-EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  305 (423)
T ss_dssp             EECC-TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred             EeCC-CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence            9999 999999988654                            6666                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   +....|+.++|||||||++|||++  |..||.+.+..++...+....     .+.+..+..++.+++
T Consensus       306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~--G~~PF~~~~~~~~~~~i~~~~-----~~~~~~~~~~s~~~~  378 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD--GEPPYFNEPPLKAMKMIRDNL-----PPRLKNLHKVSPSLK  378 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSC-----CCCCSCTTSSCHHHH
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCcCHHHHHHHHHcCC-----CCCCcccccCCHHHH
Confidence                         456679999999999999999999  679999988888777765432     113444567899999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +||.+||+.||.+|||+.++++|
T Consensus       379 dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          379 GFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHhcC
Confidence            99999999999999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=8.3e-36  Score=238.34  Aligned_cols=168  Identities=20%  Similarity=0.333  Sum_probs=142.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .+|++.+.||+|+||.||+|....   +++.||+|.++          ..+.+|++++++++||||+++++++.+++..+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   89 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT---TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII   89 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT---TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            468999999999999999998865   78999999983          45789999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||| . |+|.+++...                             ||||                            
T Consensus        90 ivmEy~-~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           90 MVIEYA-G-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EEEECC-C-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             EEEeCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence            999998 6 7999988655                             5555                            


Q ss_pred             ---------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ---------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ---------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                     +.+..+ +.++||||+||++|||++  |..||.+.+...+...+...        ....|..+++
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~llt--g~~PF~~~~~~~~~~~i~~~--------~~~~p~~~s~  237 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC--RRLPFDDESIPVLFKNISNG--------VYTLPKFLSP  237 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHT--------CCCCCTTSCH
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCH
Confidence                           344454 689999999999999999  67999998888877777654        3456778999


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++|+.+||+.||++|||+.++++|
T Consensus       238 ~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          238 GAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcC
Confidence            99999999999999999999999974

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.4e-36  Score=239.86  Aligned_cols=169  Identities=17%  Similarity=0.252  Sum_probs=136.3

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC----CCCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG----EQPP   99 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~----~~~~   99 (228)
                      +++.+.||+|+||.||+|.+..   .+..||+|.+.         ..+.+|++++++++|||||++++++.+    +..+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~  104 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence            4677889999999999999876   78899999883         458899999999999999999999865    2357


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +|||||| ++|+|.++|.+.                               ||||                         
T Consensus       105 ~lvmEy~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          105 VLVTELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEeCC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            9999999 999999988654                               5555                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                       .-.+.|+.++|||||||++|||+|  |..||.+.+.. .+...+.....      ....+..+
T Consensus       184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyellt--g~~Pf~~~~~~~~~~~~i~~~~~------~~~~~~~~  255 (290)
T 3fpq_A          184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PASFDKVA  255 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGGGGGCC
T ss_pred             CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCcHHHHHHHHHcCCC------CCCCCccC
Confidence                             223468999999999999999999  67999876544 44444433210      11234567


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++++|+.+||+.||++|||+.++++|
T Consensus       256 ~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          256 IPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            8899999999999999999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.3e-35  Score=239.69  Aligned_cols=184  Identities=20%  Similarity=0.357  Sum_probs=129.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHH--HHHHHHhhCCCCCcceeeeeeeCCC----CCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSL--REIRFLSSLQDPNLVSILGVCTGEQ----PPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~--~e~~~l~~l~h~niv~~~g~~~~~~----~~~  100 (228)
                      +++.+.+.||+|+||.||+|.+     .++.||||.++    ..+.  +|+..+.+++||||++++|++..++    ..+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-----~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence            3578899999999999999987     67899999994    2333  4555567889999999999997654    468


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------------Cccc---------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------------DNLT---------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------------r~l~---------------------  123 (228)
                      |||||| ++|+|.++|+..                                    ||||                     
T Consensus        78 lV~Ey~-~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           78 LVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEecCC-CCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            999999 999999987654                                    5555                     


Q ss_pred             ---------------------------ccc------CCCCCccchHHHHHHHHHHHhcCC--------CCCCCCCChH-H
Q psy796          124 ---------------------------RDR------DRYTCQSNVWSFAVTLWEILSLCR--------DKPFPHLTNE-Q  161 (228)
Q Consensus       124 ---------------------------~~~------~~~~~~~Dv~s~Gv~l~el~~~~~--------~~p~~~~~~~-~  161 (228)
                                                 +.+      ..++.++|||||||++|||+||+.        ..||.+.... .
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence                                       111      135678999999999999999521        1233332211 0


Q ss_pred             HHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          162 VIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                      ....+.........++..+.   +..++..+.+|+.+||+.||++||||.+|++.|+++.+.
T Consensus       237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            11112222212222222221   112346789999999999999999999999999999543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.7e-33  Score=235.30  Aligned_cols=185  Identities=36%  Similarity=0.672  Sum_probs=158.1

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ..+.|.++.++|.+.+.||+|+||.||+|.+..   ++..||+|.++        ..+.+|++++++++||||++++|++
T Consensus       105 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  181 (377)
T 3cbl_A          105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRA---DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC  181 (377)
T ss_dssp             CCCTTBCCGGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccccEEchHHeEEeeEeccCCCCeEEEEEEec---CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            346889999999999999999999999999875   67899999884        3477899999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                      ...+..++||||+ ++|+|.+++...                              +||+                    
T Consensus       182 ~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s  260 (377)
T 3cbl_A          182 TQKQPIYIVMELV-QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS  260 (377)
T ss_dssp             CSSSSCEEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             ecCCCcEEEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence            9888999999999 999999988643                              3333                    


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||+++ |..||.+.+..+....+....       
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~-g~~p~~~~~~~~~~~~~~~~~-------  332 (377)
T 3cbl_A          261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL-GASPYPNLSNQQTREFVEKGG-------  332 (377)
T ss_dssp             EECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-SCCSSTTSCHHHHHHHHHTTC-------
T ss_pred             eecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------
Confidence                                      1123467889999999999999985 468999988877766665432       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .++.|..++.++.+++.+||+.+|.+|||+.+|++.|+.+.
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            45567789999999999999999999999999999999984

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.9e-32  Score=234.18  Aligned_cols=181  Identities=33%  Similarity=0.638  Sum_probs=156.7

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.|+++.++|++.+.||+|+||.||+|.+.    .+..||||.++      +.+.+|+.++++++|+||+++++++. .
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~  254 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K  254 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEEC----CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C
Confidence            5779999999999999999999999999885    56789999985      56899999999999999999999986 5


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      +..++||||+ ++|+|.+++...                               |||+                      
T Consensus       255 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          255 EPIYIITEFM-AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV  333 (454)
T ss_dssp             SSCEEEECCC-TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred             CccEEEEeec-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence            5789999999 999999998642                               3443                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||+++|||+++ |..||.+.+..++...+....       +++
T Consensus       334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~-g~~P~~~~~~~~~~~~i~~~~-------~~~  405 (454)
T 1qcf_A          334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGY-------RMP  405 (454)
T ss_dssp             BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCHHHHHHHHHHTC-------CCC
T ss_pred             cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCC
Confidence                                   2235678899999999999999995 368999988888777766543       456


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .|..+++++.+++.+||+.+|++|||+.+|+..|+.+
T Consensus       406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            6788999999999999999999999999999999998

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.8e-32  Score=232.85  Aligned_cols=182  Identities=31%  Similarity=0.604  Sum_probs=156.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCC-
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQ-   97 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~-   97 (228)
                      ..|+++.++|++.+.||+|+||.||+|.+     .+..||||.++     ..+.+|+.++++++|+||+++++++.... 
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~-----~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  260 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG  260 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEe-----cCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC
Confidence            56889999999999999999999999987     56799999995     56899999999999999999999987665 


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                               |||+                       
T Consensus       261 ~~~iv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          261 GLYIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             CEEEEEECC-TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ceEEEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            789999999 999999998643                               3333                       


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++|||++. |..||.+.+..+....+..+.       +++.|..+
T Consensus       340 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~-g~~P~~~~~~~~~~~~i~~~~-------~~~~p~~~  411 (450)
T 1k9a_A          340 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF-GRVPYPRIPLKDVVPRVEKGY-------KMDAPDGC  411 (450)
T ss_dssp             C------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT-TCCSSTTSCTTTHHHHHHTTC-------CCCCCTTC
T ss_pred             cccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCCCCCcC
Confidence                              2345678999999999999999985 368999888777776665432       45667889


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +.++.+++.+||+.+|.+|||+.++++.|+.+..
T Consensus       412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999843

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.1e-32  Score=227.83  Aligned_cols=176  Identities=18%  Similarity=0.249  Sum_probs=140.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE-----   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----   96 (228)
                      ++|++++.||+|+||.||+|....   +++.||||+++         ..+.+|+++|+.++|||||++++++...     
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRL---TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCeEEEEEEecccCeEEEEEEECC---CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            469999999999999999999876   78999999984         4477899999999999999999987643     


Q ss_pred             -CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           97 -QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        97 -~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                       +.++|||||| . |+|.+++...                             ||||                       
T Consensus       131 ~~~~~ivmE~~-~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          131 FKSVYVVLDLM-E-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             CCCEEEEEECC-S-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             CCEEEEEEeCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence             4679999999 7 7899988654                             5555                       


Q ss_pred             -------------------------cc-cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc-
Q psy796          124 -------------------------RD-RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ-  176 (228)
Q Consensus       124 -------------------------~~-~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-  176 (228)
                                               +. ...++.++||||+||++|||++  |.+||.+.+..+....+.......... 
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~--G~~pF~g~~~~~~l~~I~~~~g~p~~~~  286 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA--RRQLFPGKNYVHQLQLIMMVLGTPSPAV  286 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH--TSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH--CCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence                                     22 2356899999999999999999  679999998888777766543221100 


Q ss_pred             -----------------ccCCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 -----------------VFLPK-----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 -----------------~~~~~-----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                       ...+.     .+.++.++.+|+.+||+.||.+|||+.++++|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                             00000     13468899999999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.4e-32  Score=240.72  Aligned_cols=173  Identities=18%  Similarity=0.242  Sum_probs=147.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      ++|++.+.||+|+||.||+|....   +++.||+|.+.       ..+.+|+++|+.++||||+++++++.+++.++|+|
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~---tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~  233 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  233 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            468899999999999999999876   78999999883       55789999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| ++|+|.++|...                              |||+                              
T Consensus       234 E~~-~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          234 EFM-SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             ECC-CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             eec-CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            999 999999988532                              4555                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     +.+..|+.++||||+||++|||++  |..||.+.+..+....+......    .....+..++++
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~  386 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS--GLSPFGGENDDETLRNVKSCDWN----MDDSAFSGISED  386 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHTTCCC----CCSGGGTTSCHH
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCcCHHHHHHHHHhCCCC----CCcccccCCCHH
Confidence                           345678999999999999999999  67999999888887777654211    111224578999


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++||.+||+.||.+|||+.++++|
T Consensus       387 ~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          387 GKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.8e-32  Score=235.43  Aligned_cols=184  Identities=30%  Similarity=0.592  Sum_probs=158.3

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ...|++..++|++.+.||+|+||.||+|.+..   .+..||||.++      ..+.+|+.++++++|+||+++++++...
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  288 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE  288 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGG---GTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcC---CCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            46799999999999999999999999999875   67899999984      6689999999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      ...++||||+ ++|+|.+++...                               |||+                      
T Consensus       289 ~~~~lv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          289 PPFYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             SSCEEEEECC-TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             CcEEEEEEcc-CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeeccccee
Confidence            8999999999 999999999652                               3333                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             +....++.++||||||+++|||+++ |..||.+.+..++...+....       ++.
T Consensus       368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~  439 (495)
T 1opk_A          368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDY-------RME  439 (495)
T ss_dssp             CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCSSTTCCGGGHHHHHHTTC-------CCC
T ss_pred             ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCC
Confidence                                   1123467899999999999999995 468999888877766665432       455


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .|..++.++.+|+.+||+.+|.+|||+.+|++.|+.+.
T Consensus       440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999873

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=5.6e-32  Score=231.17  Aligned_cols=181  Identities=32%  Similarity=0.636  Sum_probs=155.6

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.|+++.++|++.+.||+|+||.||+|.+.    .+..||||.++      +.+.+|++++++++|+||+++++++.. 
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-  250 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  250 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEEC----CCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence            4679999999999999999999999999885    45779999985      568999999999999999999999866 


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      +..++||||+ ++|+|.+++...                               +||+                      
T Consensus       251 ~~~~iv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          251 EPIYIVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  329 (452)
T ss_dssp             SSCEEEECCC-TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             CceEEEehhh-cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcccee
Confidence            6789999999 999999998642                               3333                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||+++|||+++ |..||.+.+..+....+..+.       +++
T Consensus       330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~-g~~P~~~~~~~~~~~~i~~~~-------~~~  401 (452)
T 1fmk_A          330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVERGY-------RMP  401 (452)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------CCC
T ss_pred             cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCC
Confidence                                   2234578899999999999999995 368999988887777665432       455


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .|..+++++.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            6778999999999999999999999999999999998

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=7.2e-32  Score=224.93  Aligned_cols=193  Identities=30%  Similarity=0.576  Sum_probs=158.5

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEecc----CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCc
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI----ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNL   86 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~----~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~ni   86 (228)
                      ++....+.++.++|++.+.||+|+||.||+|.....    ...+..||+|.++        ..+.+|+.++..+ +|+||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI  149 (370)
T 2psq_A           70 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI  149 (370)
T ss_dssp             CCCCTTTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTB
T ss_pred             ccccccccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCE
Confidence            344556788889999999999999999999987531    1245789999984        4578999999999 89999


Q ss_pred             ceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cc
Q psy796           87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DN  121 (228)
Q Consensus        87 v~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~  121 (228)
                      +++++++...+..++||||+ ++|+|.+++...                                             +|
T Consensus       150 v~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  228 (370)
T 2psq_A          150 INLLGACTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRD  228 (370)
T ss_dssp             CCEEEEECSSSSCEEEEECC-TTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eeEEEEEccCCCEEEEEEcC-CCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999988999999999 999999998642                                             33


Q ss_pred             cc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCC
Q psy796          122 LT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFP  155 (228)
Q Consensus       122 l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~  155 (228)
                      |+                                              .....++.++||||||+++|||+++ |..||.
T Consensus       229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~-g~~p~~  307 (370)
T 2psq_A          229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL-GGSPYP  307 (370)
T ss_dssp             CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTT-SCCSST
T ss_pred             cchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcC-CCCCCC
Confidence            33                                              2234578899999999999999995 358998


Q ss_pred             CCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          156 HLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                      +.+..++...+....       ....|..++.++.+++.+||+.+|.+|||+.+++++|+++....
T Consensus       308 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          308 GIPVEELFKLLKEGH-------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             TCCGGGHHHHHHTTC-------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            888777766655432       34457789999999999999999999999999999999985443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.3e-33  Score=227.30  Aligned_cols=167  Identities=18%  Similarity=0.294  Sum_probs=125.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP-----   98 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~-----   98 (228)
                      +|++.+.||+|+||.||+|....   +++.||||.++        +.+.+|++++++++|||||++++++...+.     
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETT---TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred             hCEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence            57889999999999999999875   78999999883        557899999999999999999999875442     


Q ss_pred             -------CeEEEeeccccCCHHHHhhhC--------------------------------Cccc----------------
Q psy796           99 -------PWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT----------------  123 (228)
Q Consensus        99 -------~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~----------------  123 (228)
                             ++++|||| ++|+|.+++...                                ||||                
T Consensus        83 ~~~~~~~l~ivmE~~-~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           83 PSSPKVYLYIQMQLC-RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             ----CEEEEEEEECC-CSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             ccCCCcEEEEEEecC-CCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence                   58999999 999999988653                                5555                


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                              +.+..|+.++|||||||++|||++     ||.+.  .+..
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-----Pf~~~--~~~~  234 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-----PFSTQ--MERV  234 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS-----CCSSH--HHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc-----CCCCc--cHHH
Confidence                                                    234578999999999999999996     55432  2222


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..+...... .   ..+.+...++++.+|+.+||+.||.+|||+.+++++
T Consensus       235 ~~~~~~~~~-~---~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          235 RTLTDVRNL-K---FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHHHHTT-C---CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhcC-C---CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            222221111 0   011112345678899999999999999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.7e-32  Score=214.61  Aligned_cols=182  Identities=29%  Similarity=0.548  Sum_probs=154.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ..|.++.++|++.+.||+|+||.||+|...    ++..||+|.++      +.+.+|++++.+++|+||+++++++.+.+
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   78 (269)
T 4hcu_A            3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA   78 (269)
T ss_dssp             --CBCCGGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             ccEEeChhhceeeheecCCCccEEEEEEec----CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            468899999999999999999999999875    56789999984      56899999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ ++++|.+++...                              +|++                        
T Consensus        79 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           79 PICLVFEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             SEEEEEECC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             ceEEEEEeC-CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccc
Confidence            899999999 999999998643                              3333                        


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||++++||+++ +..||...+..+....+....       ....+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~  229 (269)
T 4hcu_A          158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-------RLYKP  229 (269)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-------CCCCC
T ss_pred             ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcC-CCCCCCCCCHHHHHHHHhcCc-------cCCCC
Confidence                                 2234578899999999999999995 368999888887777665432       33456


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..++.++.+++.+||+.+|.+|||+.+++++|+++.
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999984

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.4e-32  Score=221.09  Aligned_cols=190  Identities=29%  Similarity=0.516  Sum_probs=157.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      -..++..++|++.+.||+|+||.||+|........+..||||.++        ..+.+|+.++.+++|+||+++++++.+
T Consensus        42 ~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             -CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             hccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            345778889999999999999999999986533355679999984        458899999999999999999999988


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                      .+..++||||+ ++|+|.+++...                              +||+                      
T Consensus       122 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          122 GRLAMIVTEYM-ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             GGCCEEEEECC-TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             CCccEEEeeCC-CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            88899999999 999999998543                              3333                      


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....++.++||||||+++|||+++ |..||.+....+....+....       .
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~-g~~p~~~~~~~~~~~~~~~~~-------~  272 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY-GERPYWNMTNRDVISSVEEGY-------R  272 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTSCHHHHHHHHHTTC-------C
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcC-CCCCcccCCHHHHHHHHHcCC-------C
Confidence                                     1124567889999999999999985 368998888887777665432       4


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                      .+.+..++.++.+++.+||+.+|.+|||+.+|++.|+.+.+...
T Consensus       273 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            45677899999999999999999999999999999999944433

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.5e-31  Score=216.52  Aligned_cols=184  Identities=27%  Similarity=0.460  Sum_probs=152.5

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceee
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      ......++++..+|++.+.||+|+||.||+|..     .+..||+|.+.         ..+.+|+.++.+++|+||++++
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~  100 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM  100 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEE-----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            345578899999999999999999999999976     67889999983         4578999999999999999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc-------------
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT-------------  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~-------------  123 (228)
                      +++...+..+++|||+ ++|+|.+++...                                  +||+             
T Consensus       101 ~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~k  179 (309)
T 3p86_A          101 GAVTQPPNLSIVTEYL-SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVK  179 (309)
T ss_dssp             EEECSTTCCEEEEECC-TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEE
T ss_pred             EEEEECCceEEEEecC-CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEE
Confidence            9999988999999999 999999988643                                  2333             


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     .....++.++||||||+++|||++  +..||.+.+..+....+..... 
T Consensus       180 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~Pf~~~~~~~~~~~~~~~~~-  256 (309)
T 3p86_A          180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT--LQQPWGNLNPAQVVAAVGFKCK-  256 (309)
T ss_dssp             ECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHH--CCCTTTTSCHHHHHHHHHHSCC-
T ss_pred             ECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcCC-
Confidence                                           234457889999999999999999  6799998887776655532211 


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                           ....+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       257 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          257 -----RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 3455778999999999999999999999999999999998

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.98  E-value=1.4e-31  Score=214.76  Aligned_cols=183  Identities=26%  Similarity=0.512  Sum_probs=153.6

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ...|+++.++|++.+.||+|+||.||++.+.    .+..||+|.++      ..+.+|++++.+++|+||+++++++.+.
T Consensus        16 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             CCTTBCCGGGEEEEEECC---CEEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CCCccCCHHHHHhHhhcCCCCCceEEEEEEc----CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence            4789999999999999999999999999875    56789999984      5688999999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ ++++|.+++...                              +||+                       
T Consensus        92 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           92 RPIFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             SSEEEEECCC-TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCeEEEEecc-CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence            8899999999 999999998652                              3333                       


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||+++ +..||...+..+....+....       ....
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~  242 (283)
T 3gen_A          171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGL-------RLYR  242 (283)
T ss_dssp             CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHHTTC-------CCCC
T ss_pred             cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCccccChhHHHHHHhccc-------CCCC
Confidence                                  2234578899999999999999984 368999888887777665432       3345


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +..+++++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            6778899999999999999999999999999999983

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.98  E-value=1.8e-31  Score=232.46  Aligned_cols=181  Identities=32%  Similarity=0.636  Sum_probs=155.7

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.|+++.++|++.+.||+|+||.||+|.+.    .+..||||.++      +.+.+|++++++++|+||+++++++.. 
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  333 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEEC----CCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence            4689999999999999999999999999985    45779999985      568999999999999999999999866 


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      +..++||||+ ++|+|.++|...                               +||+                      
T Consensus       334 ~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  412 (535)
T 2h8h_A          334 EPIYIVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  412 (535)
T ss_dssp             SSCEEEECCC-TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred             ccceEeeehh-cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence            6789999999 999999998642                               3333                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||+++|||+++ |..||.+....++...+....       +++
T Consensus       413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~-g~~P~~~~~~~~~~~~i~~~~-------~~~  484 (535)
T 2h8h_A          413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVERGY-------RMP  484 (535)
T ss_dssp             CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-TCCSSTTCCHHHHHHHHHTTC-------CCC
T ss_pred             cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CCC
Confidence                                   2234578899999999999999995 368999988888777665442       455


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+..++.++.+||.+||+.+|++|||+.+|++.|+.+
T Consensus       485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            6778999999999999999999999999999999988

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.98  E-value=6e-31  Score=220.16  Aligned_cols=197  Identities=30%  Similarity=0.589  Sum_probs=163.0

Q ss_pred             ccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC----CCceeEEeecch--------HHHHHHHHHHhhC-C
Q psy796           16 QSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE----LDTEKVAVRTCR--------GDSLREIRFLSSL-Q   82 (228)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~----~~~~~vavK~~~--------~~~~~e~~~l~~l-~   82 (228)
                      ....++....|+++.++|.+.+.||+|+||.||+|......    ..+..||+|.++        ..+.+|++++.++ +
T Consensus        54 ~~~~~~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~  133 (382)
T 3tt0_A           54 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK  133 (382)
T ss_dssp             CCCCCCCCTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             cccccccCcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcC
Confidence            34567777889999999999999999999999999875311    245789999984        4578999999999 8


Q ss_pred             CCCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-------------------------------------------
Q psy796           83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------------------  119 (228)
Q Consensus        83 h~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------------  119 (228)
                      |+||+++++++...+..++||||+ ++|+|.+++...                                           
T Consensus       134 hpnIv~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  212 (382)
T 3tt0_A          134 HKNIINLLGACTQDGPLYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC  212 (382)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECC-TTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CchhhhheeeeccCCceEEEEEec-CCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999999988999999999 999999998642                                           


Q ss_pred             --Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCC
Q psy796          120 --DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRD  151 (228)
Q Consensus       120 --r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~  151 (228)
                        +||+                                              ..+..++.++||||||++++||+++ +.
T Consensus       213 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~-g~  291 (382)
T 3tt0_A          213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL-GG  291 (382)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT-SC
T ss_pred             ecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhC-CC
Confidence              2333                                              2234567899999999999999995 35


Q ss_pred             CCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          152 KPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                      .||.+.+..++...+....       ....+..++.++.+++.+||+.+|.+|||+.+|+++|+++....
T Consensus       292 ~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          292 SPYPGVPVEELFKLLKEGH-------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             CSSTTCCHHHHHHHHHTTC-------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHcCC-------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            8999888887776665432       34456789999999999999999999999999999999994433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=2.3e-31  Score=222.14  Aligned_cols=184  Identities=29%  Similarity=0.591  Sum_probs=152.6

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..++..++|++.+.||+|+||.||+|........+..||||.++        ..+.+|+.++.+++|+||+++++++...
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  118 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS  118 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            34667788999999999999999999876332357889999884        4588999999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      ...+++|||+ ++|+|.+++...                              +||+                       
T Consensus       119 ~~~~lv~e~~-~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          119 KPVMIVTEYM-ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SSCEEEEECC-TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CceEEEEeCC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            8999999999 999999998653                              3333                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++||||||+++|||++. |..||.+.+..+....+....       ..
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~-g~~P~~~~~~~~~~~~i~~~~-------~~  269 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-GERPYWEMSNQDVIKAVDEGY-------RL  269 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-C-CTTTTCCHHHHHHHHHTTE-------EC
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CC
Confidence                                    1224578899999999999999974 468998888877766665432       34


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+..++.++.+++.+||+.+|.+||++.+|++.|+.+
T Consensus       270 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            55678899999999999999999999999999999998

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=5.4e-31  Score=216.76  Aligned_cols=192  Identities=30%  Similarity=0.569  Sum_probs=154.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      .++++.++|++.+.||+|+||.||+|......  ..+..||+|.++        ..+.+|+.++.+++|+||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            46778899999999999999999999986321  245899999984        45789999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------------------------------Cc
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------------DN  121 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------------r~  121 (228)
                      ..+..+++|||+ ++|+|.+++...                                                     +|
T Consensus       121 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          121 VGKPMCLLFEYM-AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             SSSSCEEEEECC-TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCceEEEEecC-CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            888999999999 999999998641                                                     23


Q ss_pred             cc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCC
Q psy796          122 LT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFP  155 (228)
Q Consensus       122 l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~  155 (228)
                      |+                                              .....++.++||||||+++|||+++ +..||.
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~-g~~p~~  278 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY-GLQPYY  278 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc-CCCcCC
Confidence            33                                              1234578899999999999999985 358998


Q ss_pred             CCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccCCCCC
Q psy796          156 HLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYKSNLD  225 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~~~~~  225 (228)
                      +.+..+....+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+++ ....++++
T Consensus       279 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~~~  342 (343)
T 1luf_A          279 GMAHEEVIYYVRDGN-------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVG  342 (343)
T ss_dssp             TSCHHHHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-------
T ss_pred             CCChHHHHHHHhCCC-------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhhcC
Confidence            888877766665432       2345678899999999999999999999999999999999 55555543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=7e-31  Score=208.82  Aligned_cols=181  Identities=29%  Similarity=0.547  Sum_probs=153.3

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +|.++.++|++.+.||+|+||.||++...    ++..||+|.++      +.+.+|++++.+++|+||+++++++...+.
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   77 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP   77 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEec----CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            57889999999999999999999999875    56789999984      568899999999999999999999998889


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++++|.+++...                              +||+                         
T Consensus        78 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           78 ICLVTEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             CEEEECCC-TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             eEEEEeCC-CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            99999999 999999998653                              2222                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||+++|||+++ +..||...+.......+....       ....+.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~i~~~~-------~~~~~~  228 (267)
T 3t9t_A          157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-------RLYKPR  228 (267)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-------CCCCCT
T ss_pred             ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhcc-CCCCCCCCCHHHHHHHHhcCC-------cCCCCc
Confidence                                1224567889999999999999995 368998888877766665432       234466


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=3.2e-31  Score=220.74  Aligned_cols=186  Identities=28%  Similarity=0.522  Sum_probs=154.8

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...+++.++|++.+.||+|+||.||+|.+...  ...+..||||.++        ..+.+|+.++.+++|+||+++++++
T Consensus        64 ~~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             GSCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            45678889999999999999999999997532  1156789999983        4578999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC------------------------------------Cccc--------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------DNLT--------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~--------------  123 (228)
                      ......++||||+ ++|+|.+++...                                    |||+              
T Consensus       144 ~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~  222 (367)
T 3l9p_A          144 LQSLPRFILLELM-AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  222 (367)
T ss_dssp             CSSSSCEEEEECC-TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             ecCCCCEEEEEeC-CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCce
Confidence            9988899999999 999999988642                                    3333              


Q ss_pred             -----------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q psy796          124 -----------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH  168 (228)
Q Consensus       124 -----------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~  168 (228)
                                                         +....++.++|||||||++|||+++ |..||.+.+..+....+..
T Consensus       223 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~-g~~pf~~~~~~~~~~~i~~  301 (367)
T 3l9p_A          223 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-GYMPYPSKSNQEVLEFVTS  301 (367)
T ss_dssp             EEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCHHHHHHHHHT
T ss_pred             EEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHc
Confidence                                               1234578899999999999999985 4689998888877776654


Q ss_pred             hhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          169 MYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..       ....+..++.++.+|+.+||+.+|.+|||+.+|+++|+.+.
T Consensus       302 ~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          302 GG-------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             TC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC-------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            32       34456788999999999999999999999999999999883

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=4.9e-31  Score=209.89  Aligned_cols=181  Identities=25%  Similarity=0.413  Sum_probs=148.4

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.+.++.++|++.+.||+|+||.||+|.+     .+..||+|.++         ..+.+|+.++.+++|+||+++++++.
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (271)
T 3kmu_A            3 KHSGIDFKQLNFLTKLNENHSGELWKGRW-----QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ   77 (271)
T ss_dssp             -CCCCCGGGCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEEC
T ss_pred             CcCCCCHHHhHHHHHhcCCCcceEEEEEE-----CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEc
Confidence            45678888999999999999999999987     57889999984         45889999999999999999999998


Q ss_pred             CC--CCCeEEEeeccccCCHHHHhhhC---------------------------------Cccc----------------
Q psy796           95 GE--QPPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT----------------  123 (228)
Q Consensus        95 ~~--~~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~----------------  123 (228)
                      ..  ...+++|||+ ++|+|.+++...                                 +|++                
T Consensus        78 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~  156 (271)
T 3kmu_A           78 SPPAPHPTLITHWM-PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISM  156 (271)
T ss_dssp             TTTSSSCEEEEECC-TTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred             cCCCCCeEeeeccc-CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEe
Confidence            76  6789999999 999999998654                                 2222                


Q ss_pred             -----------------------ccc---CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 -----------------------RDR---DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 -----------------------~~~---~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                             ...   ..++.++||||||+++|||++  |..||.+.+..+....+.....      
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~------  228 (271)
T 3kmu_A          157 ADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKVALEGL------  228 (271)
T ss_dssp             GGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHH--CSCTTTTSCHHHHHHHHHHSCC------
T ss_pred             ccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHh--CCCCccccChHHHHHHHHhcCC------
Confidence                                   111   122337999999999999999  6799998887766554433211      


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ....+..++.++.+++.+||+.+|.+|||+.++++.|+.+.
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          229 RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            33456778999999999999999999999999999999884

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=4.5e-31  Score=210.27  Aligned_cols=181  Identities=30%  Similarity=0.555  Sum_probs=152.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      .+++..++|++.+.||+|+||.||++...    .+..||+|.++      ..+.+|++++.+++|+||+++++++.....
T Consensus         2 ~~~l~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   77 (268)
T 3sxs_A            2 HMELKREEITLLKELGSGQFGVVKLGKWK----GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP   77 (268)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ceEechhheeeeeeeccCCCceEEEEEec----CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc
Confidence            46788899999999999999999999775    56789999984      568899999999999999999999988888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||+ ++++|.+++...                              +||+                         
T Consensus        78 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           78 IYIVTEYI-SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             EEEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             eEEEEEcc-CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            99999999 999999988643                              3333                         


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          .....++.++||||||++++||+++ +..||...+.......+....       ....+.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~  228 (268)
T 3sxs_A          157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL-GKMPYDLYTNSEVVLKVSQGH-------RLYRPH  228 (268)
T ss_dssp             TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHHTTC-------CCCCCT
T ss_pred             hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcC-CCCCccccChHHHHHHHHcCC-------CCCCCC
Confidence                                1122467899999999999999985 358998888877766654432       334466


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+++++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          229 LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            78899999999999999999999999999999984

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=7.8e-31  Score=210.44  Aligned_cols=185  Identities=31%  Similarity=0.569  Sum_probs=151.3

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+++..++|++.+.||+|+||.||+|........+..||+|.++        ..+.+|+.++.+++||||+++++++.
T Consensus         7 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (281)
T 1mp8_A            7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT   86 (281)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence            3578899999999999999999999999986533346789999874        45789999999999999999999984


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                       ++..+++|||+ ++|+|.+++...                              +||+                     
T Consensus        87 -~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           87 -ENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             -SSSCEEEEECC-TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             -cCccEEEEecC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccc
Confidence             45689999999 999999998643                              3333                     


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++||||||+++|||+++ +..||.+.+..+....+....       ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~-g~~pf~~~~~~~~~~~i~~~~-------~~  236 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGE-------RL  236 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT-SCCTTTTCCGGGHHHHHHTTC-------CC
T ss_pred             ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhc-CCCCCCcCCHHHHHHHHHcCC-------CC
Confidence                                    1224567889999999999999974 468998888777666655432       34


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       237 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            45778999999999999999999999999999999998

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=9.9e-31  Score=210.25  Aligned_cols=185  Identities=30%  Similarity=0.590  Sum_probs=157.3

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +..+.|++..++|++.+.||+|+||.||+|....   .+..||+|.++      ..+.+|+.++++++|+||+++++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   79 (288)
T 3kfa_A            3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT   79 (288)
T ss_dssp             TTCCTTBCCGGGEEEEEESGGGTTCSEEEEEEGG---GTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CchhcccccccceeEEeecCCCCceeEEEeEecC---CCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            3457899999999999999999999999999875   68899999984      56889999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                      ..+..+++|||+ ++++|.+++...                               +||+                    
T Consensus        80 ~~~~~~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~  158 (288)
T 3kfa_A           80 REPPFYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS  158 (288)
T ss_dssp             SSSSEEEEEECC-TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred             cCCCEEEEEEcC-CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccc
Confidence            888899999999 999999998653                               2232                    


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....++.++||||||+++++|+++ +..||.+.+.......+....       .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~-g~~p~~~~~~~~~~~~~~~~~-------~  230 (288)
T 3kfa_A          159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDY-------R  230 (288)
T ss_dssp             GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCGGGHHHHHHTTC-------C
T ss_pred             eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHhccC-------C
Confidence                                     1224567899999999999999995 358898887776666554432       3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...+..+++++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence            445678899999999999999999999999999999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=1.3e-30  Score=215.96  Aligned_cols=192  Identities=27%  Similarity=0.494  Sum_probs=153.4

Q ss_pred             ccCCCCCcccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCc
Q psy796           18 YKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNL   86 (228)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~ni   86 (228)
                      ......+.|+++.++|++.+.||+|+||.||+|.+..  ....++.||||.++        ..+.+|++++.++ +|+||
T Consensus         9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni   88 (359)
T 3vhe_A            9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV   88 (359)
T ss_dssp             GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence            3344457899999999999999999999999998753  22256899999984        3588999999999 79999


Q ss_pred             ceeeeeeeCCC-CCeEEEeeccccCCHHHHhhhC----------------------------------------------
Q psy796           87 VSILGVCTGEQ-PPWLVMEYPAQLGDLVQHLNSA----------------------------------------------  119 (228)
Q Consensus        87 v~~~g~~~~~~-~~~lv~e~~~~~g~L~~~l~~~----------------------------------------------  119 (228)
                      +++++++.... ..+++|||+ ++|+|.+++...                                              
T Consensus        89 v~~~~~~~~~~~~~~iv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (359)
T 3vhe_A           89 VNLLGACTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF  167 (359)
T ss_dssp             CCEEEEECSTTSCCEEEEECC-TTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred             eeeeeeeecCCCceEEEEEec-CCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence            99999987755 489999999 999999988542                                              


Q ss_pred             -------------------------------------------------Cccc---------------------------
Q psy796          120 -------------------------------------------------DNLT---------------------------  123 (228)
Q Consensus       120 -------------------------------------------------r~l~---------------------------  123 (228)
                                                                       +||+                           
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                                                             2222                           


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH-HHHHHHhhhCCCccccCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                         .....++.++||||||+++|||+++ |..||.+...... ...+....       ....+.
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~  319 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKIDEEFCRRLKEGT-------RMRAPD  319 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-SCCSSTTCCCSHHHHHHHHHTC-------CCCCCT
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhc-CCCCCCccchhHHHHHHHHcCC-------CCCCCC
Confidence                               2234578899999999999999984 3588887665433 33333221       344567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999983

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=1.9e-30  Score=213.23  Aligned_cols=193  Identities=30%  Similarity=0.597  Sum_probs=157.8

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC----CCceeEEeecch--------HHHHHHHHHHhhC-CC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE----LDTEKVAVRTCR--------GDSLREIRFLSSL-QD   83 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~----~~~~~vavK~~~--------~~~~~e~~~l~~l-~h   83 (228)
                      .+.++....|+++.++|++.+.||+|+||.||+|......    ..+..||+|.++        ..+.+|+.++.++ +|
T Consensus        21 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h  100 (334)
T 2pvf_A           21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH  100 (334)
T ss_dssp             --CCCCCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred             cccCCCCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC
Confidence            5567788899999999999999999999999999875211    156789999984        4478999999999 89


Q ss_pred             CCcceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC--------------------------------------------
Q psy796           84 PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA--------------------------------------------  119 (228)
Q Consensus        84 ~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------------------  119 (228)
                      +||+++++++...+..+++|||+ ++|+|.+++...                                            
T Consensus       101 p~iv~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  179 (334)
T 2pvf_A          101 KNIINLLGACTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI  179 (334)
T ss_dssp             TTBCCEEEEECSSSCCEEEEECC-TTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             CCEeeEEEEEccCCceEEEEECC-CCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            99999999999988999999999 999999998642                                            


Q ss_pred             -Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 -DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 -r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                       +||+                                              .....++.++||||||+++|||+++ +..
T Consensus       180 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~  258 (334)
T 2pvf_A          180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL-GGS  258 (334)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCC
T ss_pred             CCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhC-CCC
Confidence             2222                                              1123467889999999999999995 358


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ||.+.+..+....+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+++.
T Consensus       259 p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          259 PYPGIPVEELFKLLKEGH-------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             SSTTCCHHHHHHHHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcCcCCHHHHHHHHhcCC-------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            998888877776665432       34456788999999999999999999999999999999993

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=6.5e-30  Score=225.76  Aligned_cols=182  Identities=28%  Similarity=0.528  Sum_probs=152.3

Q ss_pred             cccccCCCceeee-eecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLE-RLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~-~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+.+.++++.+.. .||+|+||.||+|.+.... .+..||||.++        ..+.+|++++++++|+||+++++++..
T Consensus       329 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~  407 (613)
T 2ozo_A          329 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA  407 (613)
T ss_dssp             CSBCCTTSEEEEEEEEEECSSSEEEEEEEECSS-CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES
T ss_pred             ceeccccceeEcCcEEecCCCcEEEEEEEecCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc
Confidence            4567777787776 8999999999999886321 46789999984        568999999999999999999999976


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                       +..++||||+ ++|+|.+++...                              |||+                      
T Consensus       408 -~~~~lv~E~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~  485 (613)
T 2ozo_A          408 -EALMLVMEMA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKA  485 (613)
T ss_dssp             -SSEEEEEECC-TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred             -CCeEEEEEeC-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence             4689999999 999999998643                              3333                      


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               +....++.++|||||||++|||++. |..||.+.+..++...+..+.       +
T Consensus       486 ~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~-G~~Pf~~~~~~~~~~~i~~~~-------~  557 (613)
T 2ozo_A          486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY-GQKPYKKMKGPEVMAFIEQGK-------R  557 (613)
T ss_dssp             CC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCSHHHHHHHHTTC-------C
T ss_pred             ccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHcCC-------C
Confidence                                     1234678899999999999999984 368999988888777766543       4


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++.|..++.++.+|+.+||+.+|.+||++.+|++.|+.+
T Consensus       558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            556788999999999999999999999999999999988

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=1.9e-30  Score=210.99  Aligned_cols=192  Identities=29%  Similarity=0.572  Sum_probs=155.7

Q ss_pred             ccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcc
Q psy796           18 YKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv   87 (228)
                      ........++++.++|.+.+.||+|+||.||++......  ..+..||+|.++        ..+.+|+.++.+++|+||+
T Consensus        10 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   89 (314)
T 2ivs_A           10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI   89 (314)
T ss_dssp             ----CCTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             eeccCCcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCcee
Confidence            344455788999999999999999999999999875321  255899999984        4578899999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------------------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------------------  119 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------------------  119 (228)
                      ++++++...+..+++|||+ ++|+|.+++...                                                
T Consensus        90 ~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  168 (314)
T 2ivs_A           90 KLYGACSQDGPLLLIVEYA-KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE  168 (314)
T ss_dssp             CEEEEECSSSSCEEEEECC-TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCceEEEEeec-CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988999999999 999999998642                                                


Q ss_pred             -----Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhc
Q psy796          120 -----DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSL  148 (228)
Q Consensus       120 -----r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~  148 (228)
                           +||+                                              ..+..++.++||||||+++|||+++
T Consensus       169 ~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  248 (314)
T 2ivs_A          169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL  248 (314)
T ss_dssp             TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhC
Confidence                 2222                                              1122367889999999999999994


Q ss_pred             CCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          149 CRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       149 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                       +..||.+.+.......+....       ....+..+++++.+++.+||+.+|.+|||+.+++++|+++.
T Consensus       249 -g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          249 -GGNPYPGIPPERLFNLLKTGH-------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             -SCCSSTTCCGGGHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCHHHHHHHhhcCC-------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             358998888777666554432       34456788999999999999999999999999999999983

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=3.1e-30  Score=210.59  Aligned_cols=191  Identities=30%  Similarity=0.514  Sum_probs=157.3

Q ss_pred             ccCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcc
Q psy796           18 YKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv   87 (228)
                      ......+.|++..++|++.+.||+|+||.||+|.....  ...+..||+|.+.        ..+.+|+.+++.++|+||+
T Consensus        12 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   91 (322)
T 1p4o_A           12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV   91 (322)
T ss_dssp             CSCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBC
T ss_pred             ccccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence            33344578899999999999999999999999987631  1146889999884        3478999999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------Cccc-----
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------DNLT-----  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------r~l~-----  123 (228)
                      ++++++...+..+++|||+ ++|+|.+++...                                       +||+     
T Consensus        92 ~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIl  170 (322)
T 1p4o_A           92 RLLGVVSQGQPTLVIMELM-TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM  170 (322)
T ss_dssp             CEEEEECSSSSCEEEEECC-TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEE
T ss_pred             eeEEEEccCCccEEEEEeC-CCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEE
Confidence            9999999888999999999 999999988641                                       2333     


Q ss_pred             -----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH
Q psy796          124 -----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV  162 (228)
Q Consensus       124 -----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~  162 (228)
                                                               ..+..++.++||||||+++|||+++ +..||.+.+..+.
T Consensus       171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~  249 (322)
T 1p4o_A          171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-AEQPYQGLSNEQV  249 (322)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHT-SCCTTTTSCHHHH
T ss_pred             EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhc-CCCccccCCHHHH
Confidence                                                     1234578899999999999999996 3689988887777


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       250 ~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          250 LRFVMEGG-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHcCC-------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            66655432       2345678899999999999999999999999999999887

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.97  E-value=3.6e-31  Score=232.55  Aligned_cols=172  Identities=17%  Similarity=0.255  Sum_probs=139.0

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHH---HHHHhhCCCCCcceeeeee
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLRE---IRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e---~~~l~~l~h~niv~~~g~~   93 (228)
                      .+.-++|+++++||+|+||.||+++...   +++.||||+++.          ...+|   +.+++.++|||||++++++
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~---tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f  261 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF  261 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECC---CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE
Confidence            3445689999999999999999999876   789999999842          12333   5666778999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      .+.+.+||||||| +||+|.++|.+.                             ||||                     
T Consensus       262 ~~~~~lylVmEy~-~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          262 HTPDKLSFILDLM-NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC  340 (689)
T ss_dssp             ECSSEEEEEECCC-CSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EECCEEEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceee
Confidence            9999999999999 999999988654                             5666                     


Q ss_pred             ---------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCcccc
Q psy796          124 ---------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 ---------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~  178 (228)
                                           + .+..|+.++|+||+||++|||++  |.+||.+.+..   .+...+...        .
T Consensus       341 ~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt--G~~PF~~~~~~~~~~i~~~i~~~--------~  410 (689)
T 3v5w_A          341 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR--GHSPFRQHKTKDKHEIDRMTLTM--------A  410 (689)
T ss_dssp             ECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH--SSCTTCGGGCCCHHHHHHHHHHC--------C
T ss_pred             ecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCC--------C
Confidence                                 3 34579999999999999999999  67999764332   333333221        3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPT-----FKQIYS  212 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps-----~~~v~~  212 (228)
                      ...|..++.++++|+.+||+.||.+|++     +++|.+
T Consensus       411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            4567789999999999999999999998     677765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=4.3e-30  Score=208.77  Aligned_cols=191  Identities=29%  Similarity=0.515  Sum_probs=153.8

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcce
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVS   88 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~   88 (228)
                      .+....|+++.++|++.+.||+|+||.||+|....  ....+..||+|.++        ..+.+|+.++.++ +|+||++
T Consensus        12 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~   91 (313)
T 1t46_A           12 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN   91 (313)
T ss_dssp             SCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeee
Confidence            45567899999999999999999999999998643  12267899999984        5578999999999 9999999


Q ss_pred             eeeeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------------------------Cc
Q psy796           89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------DN  121 (228)
Q Consensus        89 ~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------r~  121 (228)
                      +++++...+..+++|||+ ++|+|.+++...                                               +|
T Consensus        92 ~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  170 (313)
T 1t46_A           92 LLGACTIGGPTLVITEYC-CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD  170 (313)
T ss_dssp             EEEEECSSSSCEEEEECC-TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEecCCCcEEEEecC-CCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999999988999999999 999999998642                                               22


Q ss_pred             cc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCC
Q psy796          122 LT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFP  155 (228)
Q Consensus       122 l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~  155 (228)
                      |+                                              .....++.++||||||++++||+++ +..||.
T Consensus       171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~  249 (313)
T 1t46_A          171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL-GSSPYP  249 (313)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCSST
T ss_pred             CccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhC-CCCCCC
Confidence            22                                              1233567889999999999999985 358888


Q ss_pred             CCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          156 HLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +...............      ....+..++.++.+++.+||+.+|.+|||+.+++++|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          250 GMPVDSKFYKMIKEGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             TCCSSHHHHHHHHHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccchhHHHHHhccCC------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            7665443333222211      23446678999999999999999999999999999999983

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-30  Score=216.51  Aligned_cols=190  Identities=26%  Similarity=0.522  Sum_probs=150.0

Q ss_pred             CCcccccCCC--ceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           23 GDVVPIPRYC--LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        23 ~~~~~~~~~~--~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      .+.+.++++.  +.+.+.||+|+||.||+|.+.........||+|.++        ..+.+|+.++++++|+||++++++
T Consensus        79 ~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~  158 (373)
T 3c1x_A           79 VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI  158 (373)
T ss_dssp             TTTTBCCSTTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEE
T ss_pred             ccccccChhhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            3445565554  456789999999999999986533234679999884        558899999999999999999998


Q ss_pred             eeC-CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------
Q psy796           93 CTG-EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------  123 (228)
Q Consensus        93 ~~~-~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------  123 (228)
                      +.. ++..+++|||+ ++|+|.+++...                              +||+                  
T Consensus       159 ~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG  237 (373)
T 3c1x_A          159 CLRSEGSPLVVLPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG  237 (373)
T ss_dssp             ECCCSSCCEEEEECC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred             EEcCCCCeEEEEECC-CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecc
Confidence            754 45789999999 999999998643                              3333                  


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++|||+++ +.+||.+.+..+....+....   
T Consensus       238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~-~~~p~~~~~~~~~~~~~~~~~---  313 (373)
T 3c1x_A          238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVNTFDITVYLLQGR---  313 (373)
T ss_dssp             --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSCTTSCSSCHHHHHHTTC---
T ss_pred             ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC-cCCCCCCCCHHHHHHHHHcCC---
Confidence                                          1234578899999999999999996 368888777666555554332   


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccC
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYK  221 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~  221 (228)
                          ....|..++.++.+++.+||+.+|.+|||+.++++.|+.+ ..+.
T Consensus       314 ----~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          314 ----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence                3445678999999999999999999999999999999999 4443

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=3e-30  Score=206.61  Aligned_cols=180  Identities=35%  Similarity=0.628  Sum_probs=150.7

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|+++.++|++.+.||+|+||.||+|...    .+..||+|.++      ..+.+|++++.+++|+||+++++++.. +
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~   80 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-E   80 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEc----CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-C
Confidence            578999999999999999999999999874    56789999884      568899999999999999999999864 4


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ ++++|.+++...                               +||+                       
T Consensus        81 ~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A           81 PIYIITEYM-ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI  159 (279)
T ss_dssp             SCEEEEECC-TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CcEEEEecC-CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence            689999999 999999988642                               2332                       


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||++++||+++ +..||.+.+..+....+....       ....
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~  231 (279)
T 1qpc_A          160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGY-------RMVR  231 (279)
T ss_dssp             SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------CCCC
T ss_pred             cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhC-CCCCCcccCHHHHHHHHhccc-------CCCC
Confidence                                  1123457789999999999999995 358998888877766665432       3345


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +..++.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            678899999999999999999999999999999998

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=2e-30  Score=212.90  Aligned_cols=170  Identities=22%  Similarity=0.341  Sum_probs=144.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      -.+|++.+.||+|+||.||+|....   +++.||+|++.         ..+.+|+++++.++|+||+++++++...+..+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHIL---TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            4568999999999999999998865   78999999883         34778999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||+ ++|+|.+++...                             |||+                            
T Consensus        91 lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           91 LIMEYA-SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             EEECCC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred             EEEECC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence            999999 999999988543                             3444                            


Q ss_pred             ---------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ---------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ---------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                     ..+..+ +.++|||||||++|||++  |..||.+.+..+....+..+        ....|..++.
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~--------~~~~p~~~s~  239 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS--GSLPFDGQNLKELRERVLRG--------KYRIPFYMST  239 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTTSCH
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCCCCCH
Confidence                           112233 478999999999999999  67999998888877777654        3445677899


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.||.+|||+.+++++
T Consensus       240 ~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          240 DCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            99999999999999999999999874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=4.9e-30  Score=208.72  Aligned_cols=194  Identities=28%  Similarity=0.493  Sum_probs=154.3

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCccee
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSI   89 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~   89 (228)
                      .....+.+.+..++|.+.+.||+|+||.||+|........+..||+|.++         ..+.+|+.++.+++|+||+++
T Consensus        22 l~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~  101 (313)
T 3brb_A           22 LQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL  101 (313)
T ss_dssp             --CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             hhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeee
Confidence            34556788889999999999999999999999887544456789999984         447899999999999999999


Q ss_pred             eeeeeCCC-----CCeEEEeeccccCCHHHHhhhC-----------------------------------Cccc------
Q psy796           90 LGVCTGEQ-----PPWLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT------  123 (228)
Q Consensus        90 ~g~~~~~~-----~~~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~------  123 (228)
                      ++++...+     ..+++|||+ ++|+|.+++...                                   +||+      
T Consensus       102 ~~~~~~~~~~~~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli  180 (313)
T 3brb_A          102 LGVCIEMSSQGIPKPMVILPFM-KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML  180 (313)
T ss_dssp             CEEEEC-------CEEEEEECC-TTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE
T ss_pred             eEEEeeccccCCcccEEEEecc-cCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence            99997654     349999999 999999998321                                   2333      


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                              .....++.++||||||+++|||+++ +..||.+.+.....
T Consensus       181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~  259 (313)
T 3brb_A          181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR-GMTPYPGVQNHEMY  259 (313)
T ss_dssp             CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCGGGHH
T ss_pred             cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhc-CCCCCccCCHHHHH
Confidence                                                    1234567889999999999999995 36889888877766


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                      ..+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+.+..
T Consensus       260 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          260 DYLLHGH-------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HHHHTTC-------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHcCC-------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            6555432       34456778999999999999999999999999999999985443

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=3.5e-30  Score=210.44  Aligned_cols=189  Identities=25%  Similarity=0.480  Sum_probs=146.3

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      ..+...++.++|++.+.||+|+||.||+|...........||+|.++         ..+.+|++++++++|+||++++++
T Consensus        14 ~~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             --CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             HhhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhce
Confidence            45678889999999999999999999999886522122489999884         457899999999999999999999


Q ss_pred             eeCCCCC------eEEEeeccccCCHHHHhhhC-----------------------------------Cccc--------
Q psy796           93 CTGEQPP------WLVMEYPAQLGDLVQHLNSA-----------------------------------DNLT--------  123 (228)
Q Consensus        93 ~~~~~~~------~lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~--------  123 (228)
                      +......      +++|||+ .+|+|.+++...                                   +||+        
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~  172 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFM-KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE  172 (323)
T ss_dssp             EECC-------CEEEEEECC-TTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             eeccccccCCCccEEEEEec-cCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC
Confidence            9876544      8999999 999999988431                                   3333        


Q ss_pred             --------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q psy796          124 --------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN  165 (228)
Q Consensus       124 --------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~  165 (228)
                                                            .....++.++||||||+++|||+++ +..||.+.+..+....
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~-g~~p~~~~~~~~~~~~  251 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR-GQTPYAGIENAEIYNY  251 (323)
T ss_dssp             TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCGGGHHHH
T ss_pred             CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhC-CCCCccccChHHHHHH
Confidence                                                  2233578899999999999999995 3689998888777666


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +....       ....+..++.++.+++.+||+.+|.+|||+.++++.|+++..
T Consensus       252 ~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          252 LIGGN-------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhcCC-------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            55432       345567889999999999999999999999999999999943

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.8e-30  Score=209.34  Aligned_cols=184  Identities=27%  Similarity=0.561  Sum_probs=152.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..++..+++++.+.||+|+||.||+|....... .+..||+|.++        ..+.+|+.++.+++|+||+++++++..
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            357888999999999999999999998864211 24579999984        457899999999999999999999988


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                      .+..+++|||+ ++|+|.+++...                              +||+                      
T Consensus       118 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          118 YKPMMIITEYM-ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SSSEEEEEECC-TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CCCcEEEEeCC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            88899999999 999999998643                              3333                      


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               .....++.++||||||+++|||++. |..||.+.+..+....+....       .
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~pf~~~~~~~~~~~~~~~~-------~  268 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY-GERPYWELSNHEVMKAINDGF-------R  268 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-------C
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcC-CCCCcccCCHHHHHHHHHCCC-------c
Confidence                                     1234577889999999999999984 358998888877766665432       3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+.+..++.++.+++.+||+.+|.+||++.++++.|+++
T Consensus       269 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            445678899999999999999999999999999999998

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=3.2e-30  Score=207.36  Aligned_cols=181  Identities=23%  Similarity=0.359  Sum_probs=147.1

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCC----CceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIEL----DTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~----~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      .++..++|.+.+.||+|+||.||+|.......    ....||+|.+.       ..+.+|+.++.+++|+||+++++++.
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   82 (289)
T 4fvq_A            3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV   82 (289)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred             EEechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence            46778899999999999999999998875211    12679999883       55889999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      ..+..+++|||+ ++|+|.+++...                              +||+                     
T Consensus        83 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           83 CGDENILVQEFV-KFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CTTCCEEEEECC-TTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             eCCCCEEEEECC-CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence            988899999999 999999998654                              2332                     


Q ss_pred             ---------------------------ccc-CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ---------------------------RDR-DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ---------------------------~~~-~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                 ... ..++.++||||||+++|||++| +.+||..............       
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~~~~~~~~~~~~~~~~~~-------  233 (289)
T 4fvq_A          162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-GDKPLSALDSQRKLQFYED-------  233 (289)
T ss_dssp             ECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHHT-------
T ss_pred             eccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC-CCCCccccchHHHHHHhhc-------
Confidence                                       111 4578899999999999999996 3577776666554443322       


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                        ....+...+.++.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       234 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l  273 (289)
T 4fvq_A          234 --RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL  273 (289)
T ss_dssp             --TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred             --cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence              2334556788899999999999999999999999999988

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=6.1e-30  Score=203.91  Aligned_cols=177  Identities=30%  Similarity=0.518  Sum_probs=144.2

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +++.++|++.+.||+|+||.||+|.+     .+..||+|.++           +.+.+|+.++..++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFW-----IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK   77 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEE-----TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEE-----cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            56788999999999999999999987     67899999884           457889999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                      .+..+++|||+ ++++|.+++...                               +|++                     
T Consensus        78 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           78 EPNLCLVMEFA-RGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             C--CEEEEECC-TTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             CCceEEEEEcC-CCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            88999999999 999998876432                               2332                     


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                   .....++.++||||||++++||++  +..||.+.+.......+.....   
T Consensus       157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~---  231 (271)
T 3dtc_A          157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAVAYGVAMNKL---  231 (271)
T ss_dssp             ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH--CCCTTTTSCHHHHHHHHHTSCC---
T ss_pred             EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHhhhcCCC---
Confidence                                         112346888999999999999999  6799988877665554433211   


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                         ..+.+..+++++.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       232 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          232 ---ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ---CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence               3345678899999999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=2.3e-30  Score=209.62  Aligned_cols=173  Identities=18%  Similarity=0.302  Sum_probs=143.4

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ...|++.+.||+|+||.||+|....   .+..||+|.+.       +.+.+|+.+++.++||||+++++++...+..+++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECC---CCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence            3568899999999999999998765   78999999883       5578999999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||+ ++|+|.+++...                            +||+                               
T Consensus        96 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  174 (297)
T 3fxz_A           96 MEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (297)
T ss_dssp             EECC-TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EECC-CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence            9999 999999988654                            3333                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   .....++.++||||||+++|||++  |..||.+.+.......+.....     +....+..++.++.
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  247 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFR  247 (297)
T ss_dssp             CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHHCS-----CCCSCGGGSCHHHH
T ss_pred             CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCC-----CCCCCccccCHHHH
Confidence                         234467899999999999999999  6799988777665554443211     12334667889999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++.+||+.||.+|||+.+++++
T Consensus       248 ~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          248 DFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHccCChhHCcCHHHHhhC
Confidence            99999999999999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=2.8e-30  Score=206.84  Aligned_cols=183  Identities=31%  Similarity=0.599  Sum_probs=150.5

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCC-
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGE-   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~-   96 (228)
                      ...|.+..++|++.+.||+|+||.||++..     .+..||+|.++     ..+.+|+.++.+++|+||+++++++... 
T Consensus        13 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (278)
T 1byg_A           13 RSGWALNMKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK   87 (278)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred             hccccCChhhceEEeEEecCCCceEEEEEE-----cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            356788899999999999999999999977     67899999985     5688999999999999999999987554 


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      +..+++|||+ ++++|.+++...                               +||+                      
T Consensus        88 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A           88 GGLYIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  166 (278)
T ss_dssp             -CCEEEECCC-TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             CceEEEEecC-CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccc
Confidence            4789999999 989999988643                               2333                      


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||++++||+++ +..||...+..+....+....       ....+..
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~-g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~  238 (278)
T 1byg_A          167 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF-GRVPYPRIPLKDVVPRVEKGY-------KMDAPDG  238 (278)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSCTTSCGGGHHHHHTTTC-------CCCCCTT
T ss_pred             ccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHhcCC-------CCCCccc
Confidence                               2234578899999999999999984 358898877776665554321       3445678


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      ++.++.+++.+||+.+|.+|||+.++++.|+.+..
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          239 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999943

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=8e-30  Score=211.64  Aligned_cols=180  Identities=15%  Similarity=0.176  Sum_probs=135.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      +.|++.+.||+|+||.||+|..+.....++.||+|.+.     ..+.+|+++|..+ +||||+++++++.+++..++|||
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            45899999999999999999875433357899999883     5578999999988 69999999999999999999999


Q ss_pred             eccccCCHHHHhhhC--------------------------Cccc-----------------------------------
Q psy796          105 YPAQLGDLVQHLNSA--------------------------DNLT-----------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~--------------------------r~l~-----------------------------------  123 (228)
                      |+ ++|+|.+++...                          ||||                                   
T Consensus       101 ~~-~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~  179 (361)
T 4f9c_A          101 YL-EHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFV  179 (361)
T ss_dssp             CC-CCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC
T ss_pred             CC-CcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccc
Confidence            99 999999987543                          5555                                   


Q ss_pred             --------------------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC-ChHHHH
Q psy796          124 --------------------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL-TNEQVI  163 (228)
Q Consensus       124 --------------------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-~~~~~~  163 (228)
                                                            + ....++.++||||+||+++||++  |..||... +..+..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~--G~~Pf~~~~~~~~~l  257 (361)
T 4f9c_A          180 QSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS--GRYPFYKASDDLTAL  257 (361)
T ss_dssp             --------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH--TCSSSSCCSSHHHHH
T ss_pred             cccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH--CCCCCCCCCCHHHHH
Confidence                                                  1 11247889999999999999999  66888544 333333


Q ss_pred             HHHHHhhh-----------------------------------CCCc-----------cccCCCCCCCcHHHHHHHHHhh
Q psy796          164 QNAEHMYY-----------------------------------GGEL-----------QVFLPKPSLCPRDIYDLMCDCW  197 (228)
Q Consensus       164 ~~~~~~~~-----------------------------------~~~~-----------~~~~~~~~~~~~~l~~li~~c~  197 (228)
                      ..+.....                                   ....           .........+++++.+|+.+||
T Consensus       258 ~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL  337 (361)
T 4f9c_A          258 AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLL  337 (361)
T ss_dssp             HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHT
T ss_pred             HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHC
Confidence            33322100                                   0000           0001123457889999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy796          198 KRDQTMRPTFKQIYSF  213 (228)
Q Consensus       198 ~~~p~~Rps~~~v~~~  213 (228)
                      +.||.+|+|++|+++|
T Consensus       338 ~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          338 DLNPASRITAEEALLH  353 (361)
T ss_dssp             CSCTTTSCCHHHHHTS
T ss_pred             cCChhHCcCHHHHhcC
Confidence            9999999999998864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=4.3e-30  Score=210.47  Aligned_cols=190  Identities=27%  Similarity=0.506  Sum_probs=152.2

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcce
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVS   88 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~   88 (228)
                      +..-.+..++..++|++.+.||+|+||.||+|.+...  ...+..||+|.+.        ..+.+|+.++.+++|+||++
T Consensus        18 sss~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (327)
T 2yfx_A           18 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR   97 (327)
T ss_dssp             EECGGGSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccchhhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCe
Confidence            3333466788999999999999999999999986431  1256789999983        45788999999999999999


Q ss_pred             eeeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------------Cccc---------
Q psy796           89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------------DNLT---------  123 (228)
Q Consensus        89 ~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~---------  123 (228)
                      +++++......+++|||+ ++|+|.+++...                                    +||+         
T Consensus        98 ~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~  176 (327)
T 2yfx_A           98 CIGVSLQSLPRFILMELM-AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP  176 (327)
T ss_dssp             EEEEECSSSSCEEEEECC-TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS
T ss_pred             EEEEEcCCCCcEEEEecC-CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecC
Confidence            999999888899999999 999999998653                                    2222         


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                              .....++.++||||||+++|||+++ |..||...+..+..
T Consensus       177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~~~~~~~~~  255 (327)
T 2yfx_A          177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-GYMPYPSKSNQEVL  255 (327)
T ss_dssp             STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCHHHHH
T ss_pred             CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC-CCCCCCCcCHHHHH
Confidence                                                    1234578899999999999999985 36899888877766


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       256 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          256 EFVTSGG-------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhcCC-------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            6655432       3345677899999999999999999999999999999988

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.9e-29  Score=205.09  Aligned_cols=180  Identities=28%  Similarity=0.503  Sum_probs=144.3

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ..++.++|++.+.||+|+||.||++.+     .+..||+|.+.     ..+.+|++++++++|+||+++++++.  +..+
T Consensus         3 ~~i~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~   75 (307)
T 2eva_A            3 HMIDYKEIEVEEVVGRGAFGVVCKAKW-----RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVC   75 (307)
T ss_dssp             CBCCGGGEEEEEEEECCSSSEEEEEEE-----TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTE
T ss_pred             CcCCHhHeeeeeEeecCCCceEEEEEE-----CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcE
Confidence            346778899999999999999999987     56889999984     55889999999999999999999886  4589


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------------Cccc----------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------------DNLT----------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------------r~l~----------------------  123 (228)
                      ++|||+ ++|+|.+++...                                   +||+                      
T Consensus        76 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A           76 LVMEYA-EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC  154 (307)
T ss_dssp             EEEECC-TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred             EEEEcC-CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence            999999 999999887643                                   2222                      


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH--HHHHHHHhhhCCCccccCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ--VIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  181 (228)
                                          ..+..++.++||||||+++|||++  |..||.......  .........       ..+.
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~-------~~~~  225 (307)
T 2eva_A          155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGT-------RPPL  225 (307)
T ss_dssp             ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHH--TCCTTTTTCSSHHHHHHHHHTTC-------CCCC
T ss_pred             ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHH--CCCCchhhCccHHHHHHHHhcCC-------CCCc
Confidence                                233467889999999999999999  668887654332  222222111       3344


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                      +..++.++.+++.+||+.+|.+|||+.++++.|+.+....+
T Consensus       226 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999999955544

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=9.2e-30  Score=204.10  Aligned_cols=186  Identities=32%  Similarity=0.589  Sum_probs=151.5

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+.+..++|++.+.||+|+||.||+|.+......+..||+|.++        ..+.+|+.+++.++|+||+++++++.+
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   84 (281)
T 3cc6_A            5 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE   84 (281)
T ss_dssp             CCCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred             ccceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence            467888899999999999999999999987543345679999884        457889999999999999999999865


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                      + ..+++|||+ ++++|.+++...                              +||+                      
T Consensus        85 ~-~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           85 E-PTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             S-SCEEEEECC-TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             C-CCEEEEecC-CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            4 579999999 999999988543                              2332                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||+++|||++. |..||......+....+....       ..+
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~-g~~p~~~~~~~~~~~~~~~~~-------~~~  234 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF-GKQPFFWLENKDVIGVLEKGD-------RLP  234 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCTTTTSCGGGHHHHHHHTC-------CCC
T ss_pred             cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhC-CCCCcccCChHHHHHHHhcCC-------CCC
Confidence                                   1234567889999999999999984 358888777766665554432       345


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      .+..+++++.+++.+||+.+|.+|||+.+++++|+.+..
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            567789999999999999999999999999999999843

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=4.2e-30  Score=207.48  Aligned_cols=189  Identities=28%  Similarity=0.526  Sum_probs=143.7

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEec-cCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC-
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETED-IELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG-   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~-~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~-   95 (228)
                      ..++..++|++.+.||+|+||.||++.+.. ....+..||+|.+.       ..+.+|+.++.+++|+||+++++++.. 
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   83 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA   83 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            456778899999999999999999998642 11167899999984       457899999999999999999999854 


Q ss_pred             -CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           96 -EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        96 -~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                       ....+++|||+ ++|+|.+++...                              +||+                     
T Consensus        84 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A           84 GRRNLKLIMEYL-PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  162 (295)
T ss_dssp             HHTSCEEEEECC-TTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred             CCCceEEEEEeC-CCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence             34689999999 999999998653                              3333                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH------------HHHHH
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE------------QVIQN  165 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~------------~~~~~  165 (228)
                                                .....++.++||||||+++|||++  +..|+......            .....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH--TTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh--cccccCCChHHHHhhhcCccccchhHHH
Confidence                                      123456889999999999999999  45665432111            11111


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +........   ..+.+..+++++.+++.+||+.+|.+|||+.++++.|+.+.+
T Consensus       241 ~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          241 LIELLKNNG---RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHHHHTTC---CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccC---cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            111111111   445677899999999999999999999999999999999843

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=1.1e-29  Score=208.45  Aligned_cols=191  Identities=31%  Similarity=0.562  Sum_probs=152.4

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhC-CCCCcc
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLV   87 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv   87 (228)
                      ..+..+.++++.++|++.+.||+|+||.||+|......  .....||+|.++        ..+.+|+.++.++ +|+||+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv  113 (333)
T 2i1m_A           34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV  113 (333)
T ss_dssp             SSCCCGGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccccccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCee
Confidence            34455689999999999999999999999999875421  123589999884        4578999999999 899999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC-------------------------------------------Cccc-
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------------------DNLT-  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------------r~l~-  123 (228)
                      ++++++...+..+++|||+ ++|+|.+++...                                           +||+ 
T Consensus       114 ~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  192 (333)
T 2i1m_A          114 NLLGACTHGGPVLVITEYC-CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAA  192 (333)
T ss_dssp             CEEEEECSSSSCEEEEECC-TTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eEEEEEecCCceEEEEecC-CCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCccc
Confidence            9999999888999999999 999999988531                                           3333 


Q ss_pred             ---------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC
Q psy796          124 ---------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT  158 (228)
Q Consensus       124 ---------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~  158 (228)
                                                                   .....++.++||||||+++|||+++ +..||.+..
T Consensus       193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~-g~~p~~~~~  271 (333)
T 2i1m_A          193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL-GLNPYPGIL  271 (333)
T ss_dssp             GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-SCCSSTTCC
T ss_pred             ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcC-CCCCCcccc
Confidence                                                         1224578899999999999999985 358888766


Q ss_pred             hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          159 NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .......+.....      ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       272 ~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          272 VNSKFYKLVKDGY------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             SSHHHHHHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHhcCC------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            5444333322211      3345667899999999999999999999999999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=1.1e-29  Score=209.35  Aligned_cols=172  Identities=19%  Similarity=0.323  Sum_probs=146.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +..++|++.+.||+|+||.||++....   +++.||+|.++          ..+.+|+.++..++||||+++++++...+
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   78 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD   78 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC
Confidence            345679999999999999999998865   78999999984          34678999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                             |||+                         
T Consensus        79 ~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           79 RLCFVMEYA-NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EEEEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            999999999 999999888643                             3333                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||+++|||++  |..||.+.+.......+...        ....|..
T Consensus       158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~--------~~~~p~~  227 (337)
T 1o6l_A          158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHERLFELILME--------EIRFPRT  227 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTT
T ss_pred             CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCCC
Confidence                               334567899999999999999999  67999888877777666543        3445778


Q ss_pred             CcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ++.++.+++.+||+.+|.+||     ++.++++|
T Consensus       228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            899999999999999999999     89999874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.9e-30  Score=204.61  Aligned_cols=183  Identities=27%  Similarity=0.523  Sum_probs=148.7

Q ss_pred             CcccccCCCceeee-eecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLE-RLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~-~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.+.++++++.+.+ .||+|+||.||+|.+.... .+..||+|.++        ..+.+|++++.+++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   80 (287)
T 1u59_A            2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ   80 (287)
T ss_dssp             CCCBCCGGGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CcccccHHHhhhhhccccccCceeEEEeEeccCC-CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec
Confidence            45778888999887 9999999999999864321 56789999984        45789999999999999999999994


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                       .+..+++|||+ ++++|.+++...                              +||+                     
T Consensus        81 -~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  158 (287)
T 1u59_A           81 -AEALMLVMEMA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  158 (287)
T ss_dssp             -SSSEEEEEECC-TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             -CCCcEEEEEeC-CCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccccee
Confidence             44689999999 999999998533                              2332                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||++. |..||.+.+..+....+....       
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~~~~~~~~~~~i~~~~-------  230 (287)
T 1u59_A          159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY-GQKPYKKMKGPEVMAFIEQGK-------  230 (287)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTCCTHHHHHHHHTTC-------
T ss_pred             eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcC-CCCCcccCCHHHHHHHHhcCC-------
Confidence                                      1123467789999999999999984 358998888777766665432       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....+..++.++.+++.+||+.+|.+||++.+++++|+.+
T Consensus       231 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          231 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3445678999999999999999999999999999999998

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=1.5e-29  Score=204.00  Aligned_cols=183  Identities=29%  Similarity=0.519  Sum_probs=148.7

Q ss_pred             CcccccCCCceeee-eecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLE-RLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~-~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      +.+.++.++|.+.+ .||+|+||.||+|.+.... .+..||+|.++         ..+.+|+.++..++|+||+++++++
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCC-ceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            56778888999988 9999999999999764321 57899999984         4578999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                       ..+..+++|||+ ++++|.+++...                             +||+                     
T Consensus        88 -~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           88 -EAESWMLVMEMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             -ESSSEEEEEECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             -CCCCcEEEEEeC-CCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence             455689999999 999999998754                             2332                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||+++ |..||.+.+..+....+....       
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-------  237 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAMLEKGE-------  237 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-------
Confidence                                      1122356789999999999999984 358999888877766655432       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       238 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          238 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3445678899999999999999999999999999999988

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=3.3e-29  Score=221.96  Aligned_cols=183  Identities=30%  Similarity=0.522  Sum_probs=150.5

Q ss_pred             CcccccCCCceee-eeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ..+.+++..+.+. +.||+|+||.||+|.+.... .+..||||+++         ..+.+|++++.+++|+||+++++++
T Consensus       361 ~~~~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~  439 (635)
T 4fl3_A          361 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC  439 (635)
T ss_dssp             SSSBCCGGGEEEEEEEEEECSSEEEEEEEEECSS-CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccccchhccccCCEeccCCCEEEEEEEEcCCC-cceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3455666666664 48999999999999775321 56899999984         4588999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      ..+ ..++||||+ ++|+|.+++...                             |||+                     
T Consensus       440 ~~~-~~~lv~E~~-~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~  517 (635)
T 4fl3_A          440 EAE-SWMLVMEMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK  517 (635)
T ss_dssp             ESS-SEEEEEECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHH
T ss_pred             ecC-CEEEEEEcc-CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcc
Confidence            654 578999999 999999998654                             4444                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                +....++.++|||||||++|||+++ |..||.+.+..++...+....       
T Consensus       518 ~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~-G~~Pf~~~~~~~~~~~i~~~~-------  589 (635)
T 4fl3_A          518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAMLEKGE-------  589 (635)
T ss_dssp             HTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------
T ss_pred             ccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------
Confidence                                      2233678899999999999999984 369999988888777766543       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ....|..++.++.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            4456778999999999999999999999999999999988

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.4e-29  Score=208.62  Aligned_cols=188  Identities=30%  Similarity=0.509  Sum_probs=152.4

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILG   91 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g   91 (228)
                      ...|+++.++|++.+.||+|+||.||+|.....  ...+..||+|.++        ..+.+|+.++.++ +||||+++++
T Consensus        37 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  116 (344)
T 1rjb_A           37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG  116 (344)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            457899999999999999999999999997431  1256789999984        4578999999999 8999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------------------
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------------------  119 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------------------  119 (228)
                      ++...+..+++|||+ ++|+|.+++...                                                    
T Consensus       117 ~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  195 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYC-CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  195 (344)
T ss_dssp             EECSSSSCEEEEECC-TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEeeCCccEEEEecC-CCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            999988999999999 999999998642                                                    


Q ss_pred             Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCC
Q psy796          120 DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKP  153 (228)
Q Consensus       120 r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p  153 (228)
                      +||+                                              .....++.++||||||+++|||+++ |..|
T Consensus       196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~-g~~p  274 (344)
T 1rjb_A          196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL-GVNP  274 (344)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-SCCS
T ss_pred             CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC-CCCC
Confidence            2222                                              2234578899999999999999984 3588


Q ss_pred             CCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          154 FPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      |.+..............      ...+.+..+++++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       275 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          275 YPGIPVDANFYKLIQNG------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             STTCCCSHHHHHHHHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             cccCCcHHHHHHHHhcC------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            98776544333322211      134456778999999999999999999999999999999983

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=2.5e-29  Score=223.46  Aligned_cols=189  Identities=30%  Similarity=0.555  Sum_probs=157.0

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceee
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      .++....+++..++|++.+.||+|+||.||+|.+......+..||+|.++        +.+.+|+.++.+++||||++++
T Consensus       378 ~~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~  457 (656)
T 2j0j_A          378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI  457 (656)
T ss_dssp             CCSCGGGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccCcccccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            34455677888889999999999999999999986543356789999874        5688999999999999999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------  123 (228)
                      |++. ++..++||||+ ++|+|.+++...                              +||+                 
T Consensus       458 ~~~~-~~~~~lv~E~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DF  535 (656)
T 2j0j_A          458 GVIT-ENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF  535 (656)
T ss_dssp             EEEC-SSSCEEEEECC-TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred             EEEe-cCceEEEEEcC-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEec
Confidence            9985 45689999999 999999998643                              3333                 


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                  .....++.++||||||+++|||+++ |..||.+.+..+....+....     
T Consensus       536 G~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~-g~~Pf~~~~~~~~~~~i~~~~-----  609 (656)
T 2j0j_A          536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGE-----  609 (656)
T ss_dssp             CCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHHTC-----
T ss_pred             CCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-----
Confidence                                        2234578899999999999999975 468999888887777665532     


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                        ..+.+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       610 --~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          610 --RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              3456778999999999999999999999999999999988

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.8e-29  Score=201.84  Aligned_cols=187  Identities=27%  Similarity=0.509  Sum_probs=150.0

Q ss_pred             CCcccccCCCce--eeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           23 GDVVPIPRYCLR--VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        23 ~~~~~~~~~~~~--~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      .+++.++...+.  ..+.||+|+||.||+|.+......+..||+|.+.        +.+.+|+.+++.++|+||++++++
T Consensus        11 ~~~~~i~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   90 (298)
T 3pls_A           11 VKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGI   90 (298)
T ss_dssp             TGGGBCCGGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hhheEccccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            455666666555  4589999999999999986533345689999884        457899999999999999999999


Q ss_pred             eeCCCCC-eEEEeeccccCCHHHHhhhC------------------------------Cccc------------------
Q psy796           93 CTGEQPP-WLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------  123 (228)
Q Consensus        93 ~~~~~~~-~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------  123 (228)
                      +...+.. +++|||+ .+|+|.+++...                              +|++                  
T Consensus        91 ~~~~~~~~~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg  169 (298)
T 3pls_A           91 MLPPEGLPHVLLPYM-CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG  169 (298)
T ss_dssp             ECCSSSCCEEEECCC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EecCCCCcEEEEecc-cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCC
Confidence            9776554 9999999 999999998653                              3333                  


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++|||++|+ .+||...+..+....+....   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~-~~~~~~~~~~~~~~~~~~~~---  245 (298)
T 3pls_A          170 LARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG-APPYRHIDPFDLTHFLAQGR---  245 (298)
T ss_dssp             SSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTS-CCTTTTSCGGGHHHHHHTTC---
T ss_pred             CcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCC-CCCCccCCHHHHHHHhhcCC---
Confidence                                          12335688999999999999999963 57777777776666555432   


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                          ..+.+..++.++.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       246 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          246 ----RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                34456778999999999999999999999999999999993

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1.7e-29  Score=207.10  Aligned_cols=183  Identities=25%  Similarity=0.469  Sum_probs=147.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..+..++|++.+.||+|+||.||+|.+..... ....||+|.++        ..+.+|+.++.+++|+||+++++++...
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   89 (327)
T 3poz_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             EECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred             hhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence            34566789999999999999999999754110 12457888873        5588999999999999999999999875


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      . .+++++|+ .+|+|.+++...                              +||+                       
T Consensus        90 ~-~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           90 T-VQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             S-EEEEEECC-TTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             C-eEEEEEec-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            4 78999999 999999988653                              3443                       


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             ..+..++.++||||||+++|||+++ |..||.+.+.......+....       ..+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~p~~~~~~~~~~~~~~~~~-------~~~  239 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGE-------RLP  239 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCGGGHHHHHHTTC-------CCC
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhc-CCCCccCCCHHHHHHHHHcCC-------CCC
Confidence                                   2234578899999999999999995 358998888777666554432       345


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+..++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          240 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            57778999999999999999999999999999999883

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=2e-29  Score=206.17  Aligned_cols=172  Identities=19%  Similarity=0.347  Sum_probs=146.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +..++|++.+.||+|+||.||++....   +++.||+|.++          ..+.+|+.++..++||||+++++++.+.+
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~   79 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ   79 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC
Confidence            455779999999999999999998865   78999999984          33567999999999999999999999998


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                             |||+                         
T Consensus        80 ~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           80 QIFMIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             EEEEEECCC-CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EEEEEEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            999999999 999999998654                             3333                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||++  |..||.+.+.......+...        ....|..++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~--------~~~~p~~~~~  228 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA--GYTPFYDSNTMKTYEKILNA--------ELRFPPFFNE  228 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHC--------CCCCCTTSCH
T ss_pred             ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh--CCCCCCCCCHHHHHHHHHhC--------CCCCCCCCCH
Confidence                            234567899999999999999999  67999888877777666543        3445678899


Q ss_pred             HHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+||     +++++++|
T Consensus       229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            999999999999999999     88888863

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=2.8e-29  Score=208.64  Aligned_cols=172  Identities=19%  Similarity=0.255  Sum_probs=143.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|++.+.||+|+||.||++....   ++..||+|.++             ..+.+|+.++.+++||||+++++++.+..
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hceEEeeEEeeCcCEEEEEEEECC---CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            458899999999999999999875   78899999883             45789999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                             +||+                         
T Consensus        89 ~~~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           89 DVVLILELV-SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             EEEEEEECC-CSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             EEEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence            999999999 999999998654                             2332                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++|||||||++|+|++  |..||.+.+..+....+.......    ....
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~Pf~~~~~~~~~~~i~~~~~~~----~~~~  241 (361)
T 2yab_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS--GASPFLGDTKQETLANITAVSYDF----DEEF  241 (361)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHTTCCCC----CHHH
T ss_pred             EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhcCCCC----Cchh
Confidence                                  223467889999999999999999  679999888877777665432110    0111


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +..++.++++++.+||+.||.+|||+.++++
T Consensus       242 ~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          242 FSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            3568899999999999999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=7.9e-30  Score=211.35  Aligned_cols=176  Identities=19%  Similarity=0.315  Sum_probs=143.4

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILG   91 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g   91 (228)
                      .....+..++|++.++||+|+||.||+++...   +++.||+|+++          ..+.+|..++..+ +|+||+++++
T Consensus        15 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~   91 (353)
T 3txo_A           15 NSSNRLGIDNFEFIRVLGKGSFGKVMLARVKE---TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFC   91 (353)
T ss_dssp             --------CCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             CCcCCCchhheEEEEEEeeCCCEEEEEEEEcC---CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEE
Confidence            34455677889999999999999999999875   78999999985          2357889999988 7999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------  123 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------  123 (228)
                      ++.+.+..++||||+ ++|+|.+++...                             |||+                   
T Consensus        92 ~~~~~~~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~  170 (353)
T 3txo_A           92 CFQTPDRLFFVMEFV-NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM  170 (353)
T ss_dssp             EEECSSEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEeCCEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccc
Confidence            999999999999999 999999888643                             4444                   


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               +....++.++|||||||++|||++  |..||.+.+..++...+...        .
T Consensus       171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--G~~Pf~~~~~~~~~~~i~~~--------~  240 (353)
T 3txo_A          171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC--GHAPFEAENEDDLFEAILND--------E  240 (353)
T ss_dssp             CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------C
T ss_pred             eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------C
Confidence                                     122346889999999999999999  67999998888887777654        3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCH------HHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTF------KQIYS  212 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~------~~v~~  212 (228)
                      ...|..++.++.+++.+||+.+|.+||++      .++++
T Consensus       241 ~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          241 VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            45677789999999999999999999998      77765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=3.1e-29  Score=205.35  Aligned_cols=187  Identities=28%  Similarity=0.569  Sum_probs=152.9

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCcee--EEeecch--------HHHHHHHHHHhhC-CCCCcceeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCR--------GDSLREIRFLSSL-QDPNLVSILG   91 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~--vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g   91 (228)
                      ...+.+..++|++.+.||+|+||.||+|....   .+..  |++|.++        ..+.+|++++.++ +|+||+++++
T Consensus        17 ~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   93 (327)
T 1fvr_A           17 TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG   93 (327)
T ss_dssp             CCSSBCCGGGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             cccccccHHHccceeeeecCCCceEEEEEEcc---CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhce
Confidence            45666788899999999999999999999875   5554  5899874        4478899999999 8999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc---
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT---  123 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~---  123 (228)
                      ++...+..+++|||+ ++|+|.+++...                                             +||+   
T Consensus        94 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A           94 ACEHRGYLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             EEEETTEEEEEECCC-TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeeeCCceEEEEecC-CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            999988899999999 999999998642                                             2232   


Q ss_pred             ----------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ----------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ----------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                              .....++.++||||||+++|||++. |..||.+.+..+..
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~-g~~pf~~~~~~~~~  251 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELY  251 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHH
T ss_pred             EEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcC-CCCCCCCCcHHHHH
Confidence                                                    1223467899999999999999984 35899888877766


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccC
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYK  221 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~  221 (228)
                      ..+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+ .+..
T Consensus       252 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          252 EKLPQGY-------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             HHGGGTC-------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             HHhhcCC-------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence            6554332       3445677899999999999999999999999999999998 4433

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=3.6e-29  Score=202.15  Aligned_cols=177  Identities=27%  Similarity=0.557  Sum_probs=141.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee-CCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT-GEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~-~~~~~~lv  102 (228)
                      +|++.+.||+|+||.||+|...........||+|.++        ..+.+|+.++++++|+||+++++++. .++..+++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            4667899999999999999876433244578999874        45789999999999999999999864 45578999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ ++|+|.+++...                              +||+                             
T Consensus       106 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          106 LPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EECC-TTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             EeCC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence            9999 999999998643                              3333                             


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||++++||+++ +.+||.+.+..+....+....       ....+..
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  256 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVNTFDITVYLLQGR-------RLLQPEY  256 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTSCTTTHHHHHHTTC-------CCCCCTT
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhC-CCCCCccCCHHHHHHHHhcCC-------CCCCCcc
Confidence                               1234568899999999999999997 367888777766655554432       3345677


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            899999999999999999999999999999999

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=2.5e-29  Score=206.22  Aligned_cols=179  Identities=18%  Similarity=0.289  Sum_probs=144.4

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      ....+..++|++.+.||+|+||.||++........+..||+|.++           ..+.+|+.++..++|+||++++++
T Consensus        10 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             ---CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             CCCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            345677788999999999999999999875323378899999884           235789999999999999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      +...+..+++|||+ ++|+|.+++...                             +||+                    
T Consensus        90 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~  168 (327)
T 3a62_A           90 FQTGGKLYLILEYL-SGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC  168 (327)
T ss_dssp             EECSSCEEEEEECC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred             EEcCCEEEEEEeCC-CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence            99999999999999 999999888643                             3333                    


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++||||||+++|||++  |..||.+.+.......+...        ..
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~--------~~  238 (327)
T 3a62_A          169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT--GAPPFTGENRKKTIDKILKC--------KL  238 (327)
T ss_dssp             ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHT--------CC
T ss_pred             cccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhC--------CC
Confidence                                    224457889999999999999999  67999988887777666553        34


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ..|..++.++.+++.+||+.+|.+||     ++.++++|
T Consensus       239 ~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            45677899999999999999999999     78888763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=9.2e-30  Score=206.93  Aligned_cols=176  Identities=21%  Similarity=0.334  Sum_probs=142.9

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +.+..++|.+.+.||+|+||.||++....   ++..||+|.+.       ..+.+|++++.+++|+||+++++++.+...
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   81 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR   81 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECC---CCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCe
Confidence            45677889999999999999999999865   68899999872       568899999999999999999999999888


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++||||+ ++|+|.+++...                              +||+                         
T Consensus        82 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           82 LNFITEYI-KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD  160 (310)
T ss_dssp             EEEEEECC-TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEec-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence            99999999 999999998762                              3333                         


Q ss_pred             ---------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH------HHHH
Q psy796          124 ---------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE------QVIQ  164 (228)
Q Consensus       124 ---------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~------~~~~  164 (228)
                                                       ..+..++.++||||||+++|||++  +..||......      ....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~  238 (310)
T 3s95_A          161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG--RVNADPDYLPRTMDFGLNVRG  238 (310)
T ss_dssp             -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--TCCSSTTTSCBCTTSSBCHHH
T ss_pred             ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc--CCCCCcchhhhHHHHhhhhhc
Confidence                                             112346889999999999999999  45666543221      1111


Q ss_pred             HHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          165 NAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..           ....+..++.++.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       239 ~~-----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          239 FL-----------DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             HH-----------HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cc-----------cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11           11236678899999999999999999999999999999883

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=4.6e-29  Score=200.49  Aligned_cols=182  Identities=24%  Similarity=0.435  Sum_probs=143.8

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------------HHHHHHHHHHhhCCCCCcc
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------~~~~~e~~~l~~l~h~niv   87 (228)
                      ......+..++|++.+.||+|+||.||+|....   ++..||+|.+.              ..+.+|+.++.+++|+||+
T Consensus        10 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   86 (287)
T 4f0f_A           10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVK---DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV   86 (287)
T ss_dssp             --CCCBCCSTTEEEEEECCCCSSSCEEEEEETT---TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBC
T ss_pred             chhhhhhhhccceehhccccCCceeEEEEEEcC---CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCch
Confidence            345566788899999999999999999999865   78899999883              5688999999999999999


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHHHhhhC--------------------------------Cccc------------
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT------------  123 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~------------  123 (228)
                      ++++++.+.  .+++|||+ ++|+|.+++...                                +||+            
T Consensus        87 ~~~~~~~~~--~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~  163 (287)
T 4f0f_A           87 KLYGLMHNP--PRMVMEFV-PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN  163 (287)
T ss_dssp             CEEEEETTT--TEEEEECC-TTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT
T ss_pred             hhheeecCC--CeEEEEec-CCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC
Confidence            999998554  47999999 999998877432                                2222            


Q ss_pred             ----------------------------------c--ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH--HHH
Q psy796          124 ----------------------------------R--DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV--IQN  165 (228)
Q Consensus       124 ----------------------------------~--~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~--~~~  165 (228)
                                                        .  ....++.++||||||+++|||++  |..||...+....  ...
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~  241 (287)
T 4f0f_A          164 APVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKIKFINM  241 (287)
T ss_dssp             CSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH--SSCTTTTCCCCHHHHHHH
T ss_pred             CceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc--CCCCCccccccHHHHHHH
Confidence                                              1  23345788999999999999999  6789987655433  222


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +....      .....+..++.++.+++.+||+.+|.+|||+.++++.|+++
T Consensus       242 ~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          242 IREEG------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHSC------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HhccC------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            22211      13345678899999999999999999999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.1e-29  Score=206.17  Aligned_cols=173  Identities=16%  Similarity=0.217  Sum_probs=143.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      ++|++.+.||+|+||.||++....   ++..||+|.++      ..+.+|+.++..++||||+++++++.+.+..+++||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hceEeeeEEecCCCeEEEEEEECC---CCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            568999999999999999999875   78999999883      457899999999999999999999999889999999


Q ss_pred             eccccCCHHHHhhhC------------------------------Cccc-------------------------------
Q psy796          105 YPAQLGDLVQHLNSA------------------------------DNLT-------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~------------------------------r~l~-------------------------------  123 (228)
                      |+ ++|+|.+++...                              +||+                               
T Consensus        82 ~~-~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           82 FI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CC-CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             eC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            99 999999988643                              3333                               


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    .....++.++||||||+++|||++  |..||.+.+..+....+.......    .......++.++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~s~~~  234 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS--GINPFLAETNQQIIENIMNAEYTF----DEEAFKEISIEA  234 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHTCCCC----CHHHHTTSCHHH
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh--CCCCCcCCCHHHHHHHHHcCCCCC----ChhhhccCCHHH
Confidence                          122346889999999999999999  679999888887777766542110    001124688999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.||.+|||+.+++++
T Consensus       235 ~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          235 MDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcC
Confidence            999999999999999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=3.3e-29  Score=200.66  Aligned_cols=175  Identities=18%  Similarity=0.338  Sum_probs=146.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+.-++|++.+.||+|+||.||+|....   .+..||+|.+.          ..+.+|+.++..++|+||+++++++.
T Consensus         3 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (279)
T 3fdn_A            3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH   79 (279)
T ss_dssp             -CCCCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cceeecccEEEeeEEecCCCeEEEEEEEcc---CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe
Confidence            344556789999999999999999998875   67899999883          34788999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      +....+++|||+ ++|+|.+++...                             +||+                      
T Consensus        80 ~~~~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~  158 (279)
T 3fdn_A           80 DATRVYLILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH  158 (279)
T ss_dssp             CSSEEEEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred             cCCEEEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEecccccc
Confidence            988899999999 999999887643                             2333                      


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          ..+..++.++||||||++++||++  |..||...+..+....+...        ....|.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~  228 (279)
T 3fdn_A          159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV--GKPPFEANTYQETYKRISRV--------EFTFPD  228 (279)
T ss_dssp             C--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHT--------CCCCCT
T ss_pred             CCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH--CCCCCCCCcHHHHHHHHHhC--------CCCCCC
Confidence                                233456789999999999999999  67999988877777666543        344577


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.++.+++.+||+.+|.+|||+.+++++
T Consensus       229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          229 FVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            789999999999999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.96  E-value=3.6e-30  Score=207.57  Aligned_cols=184  Identities=16%  Similarity=0.156  Sum_probs=143.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +-..+|++.+.||+|+||.||+|....   .++.||+|.++          ..+.+|+..+.+++|+||+++++++...+
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  104 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTA---LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA  104 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETT---TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecC---CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence            334569999999999999999999865   68999999984          45889999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------Cccc-----------------cccCCCCCcc
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-----------------RDRDRYTCQS  133 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-----------------~~~~~~~~~~  133 (228)
                      ..+++|||+ ++++|.+++...                           +||+                 .....++.++
T Consensus       105 ~~~lv~e~~-~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~  183 (286)
T 3uqc_A          105 GGLVVAEWI-RGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQD  183 (286)
T ss_dssp             EEEEEEECC-CEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHH
T ss_pred             cEEEEEEec-CCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCCCchh
Confidence            899999999 999999988654                           4444                 1223578999


Q ss_pred             chHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          134 NVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       134 Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ||||||+++|||++  |..||.+.+.......+..... .........+..++.++.+++.+||+.||.+| |+.++++.
T Consensus       184 Di~slG~il~ellt--g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          184 DIRGIGASLYALLV--NRWPLPEAGVRSGLAPAERDTA-GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHHHHHHHH--SEECSCCCSBCCCSEECCBCTT-SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHHHHHHHHHHHH--CCCCCCcCCcchhhHHHHHHhc-cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            99999999999999  6789987654321100000000 00000001235688999999999999999999 99999999


Q ss_pred             HHHHhc
Q psy796          214 MKRSTN  219 (228)
Q Consensus       214 l~~~~~  219 (228)
                      |+++..
T Consensus       260 L~~~~~  265 (286)
T 3uqc_A          260 MQQATA  265 (286)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            999843

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=4.3e-29  Score=206.73  Aligned_cols=172  Identities=21%  Similarity=0.294  Sum_probs=146.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ...++|++.+.||+|+||.||++....   ++..||+|.++          ..+.+|+.++..++||||+++++++.+.+
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  114 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            344678999999999999999999875   78899999984          34678999999999999999999999998


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                             |||+                         
T Consensus       115 ~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          115 NLYMVMEYV-AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EEEEEEECC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence            999999999 999999988653                             3443                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      +....++.++||||||+++|||++  |..||.+.+..+....+...        ....|..++.
T Consensus       194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~~~  263 (350)
T 1rdq_E          194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSG--------KVRFPSHFSS  263 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTTCCH
T ss_pred             CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCH
Confidence                            234567899999999999999999  67999988887777777654        3456778999


Q ss_pred             HHHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      ++.+++.+||+.||.+||+     +.+|++|
T Consensus       264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            9999999999999999998     8888763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=4.2e-29  Score=212.74  Aligned_cols=173  Identities=19%  Similarity=0.257  Sum_probs=142.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||++....   .+..+|+|.+.         ..+.+|+.+++.++||||+++++++.+.+..++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVL---AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETT---TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            358889999999999999998765   78999999883         457899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++|+|.+++...                             |||+                             
T Consensus        88 v~E~~-~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A           88 IFDLV-TGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             EECCC-BCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred             EEEeC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence            99999 999998887644                             3333                             


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        +....++.++|||||||++|+|++  |..||.+.+.......+......    ...+....+
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~  240 (444)
T 3soa_A          167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV--GYPPFWDEDQHRLYQQIKAGAYD----FPSPEWDTV  240 (444)
T ss_dssp             CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHTCCC----CCTTTTTTS
T ss_pred             CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh--CCCCCCCccHHHHHHHHHhCCCC----CCccccccC
Confidence                              223468899999999999999999  67999988888777777654321    112223568


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++.+++.+||+.||.+|||+.+++++
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            9999999999999999999999999873

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=1.1e-29  Score=207.84  Aligned_cols=190  Identities=15%  Similarity=0.247  Sum_probs=138.5

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ....+.++.++|++.+.||+|+||.||+|.+     .++.||||.++      ....+|+.++.+++|+||+++++++..
T Consensus        15 ~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   89 (322)
T 3soc_A           15 GTENLYFQSMPLQLLEVKARGRFGCVWKAQL-----LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR   89 (322)
T ss_dssp             CCCCEEETTEEEEEEEEEECSTTCEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             CccccccchhhchhhheecccCceEEEEEEE-----CCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceecc
Confidence            4567889999999999999999999999987     57899999984      335668888999999999999999987


Q ss_pred             CCC----CeEEEeeccccCCHHHHhhhC--------------------------------------Cccc----------
Q psy796           96 EQP----PWLVMEYPAQLGDLVQHLNSA--------------------------------------DNLT----------  123 (228)
Q Consensus        96 ~~~----~~lv~e~~~~~g~L~~~l~~~--------------------------------------r~l~----------  123 (228)
                      ...    .+++|||+ ++|+|.+++...                                      +||+          
T Consensus        90 ~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~  168 (322)
T 3soc_A           90 GTSVDVDLWLITAFH-EKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL  168 (322)
T ss_dssp             ECSSSEEEEEEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred             CCCCCceEEEEEecC-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence            543    59999999 999999887543                                      2333          


Q ss_pred             ------------------------------------ccc-----CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-
Q psy796          124 ------------------------------------RDR-----DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-  161 (228)
Q Consensus       124 ------------------------------------~~~-----~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-  161 (228)
                                                          ..+     ..++.++||||||+++|||++  |..||.+..... 
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~t--g~~pf~~~~~~~~  246 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYM  246 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT--TBTTSSSCCCCCC
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHh--CCCCCCCCcchhc
Confidence                                                000     233456799999999999999  567776532110 


Q ss_pred             -----------HHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          162 -----------VIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       162 -----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                                 ....+..........+..+.   +..++.++.+++.+||+.||++|||+.+|++.|+++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                       01111111111111111110   12234569999999999999999999999999999854

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=5.5e-29  Score=201.17  Aligned_cols=186  Identities=18%  Similarity=0.248  Sum_probs=147.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      .++|++.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.++.+++||||+++++++...+..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~   86 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTI---LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY   86 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT---TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECC---CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeE
Confidence            4568999999999999999998765   68899999872          4578999999999999999999999988889


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      +++|||+ ++++|.+++...                             +||+                           
T Consensus        87 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           87 YLVMEYI-EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEEEECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EEEEeCC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            9999999 999999988653                             3333                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        ..+..++.++||||||+++|||++  |..||.+.+...........   .........+..+
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  240 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV--GEPPFNGETAVSIAIKHIQD---SVPNVTTDVRKDI  240 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHH--SSCSSCSSCHHHHHHHHHSS---CCCCHHHHSCTTS
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhhc---cCCCcchhcccCC
Confidence                              223456789999999999999999  67999887766544332221   1111111234668


Q ss_pred             cHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHH-hccCCCC
Q psy796          186 PRDIYDLMCDCWKRDQTMRP-TFKQIYSFMKRS-TNYKSNL  224 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rp-s~~~v~~~l~~~-~~~~~~~  224 (228)
                      +..+.+++.+||+.+|.+|| +++++.+.|+.+ .+...+.
T Consensus       241 ~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~  281 (294)
T 4eqm_A          241 PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE  281 (294)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred             CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence            89999999999999999998 899999999988 4443333

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=2.2e-29  Score=206.19  Aligned_cols=183  Identities=30%  Similarity=0.505  Sum_probs=146.8

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..+..++|++.+.||+|+||.||+|.+..... ....|++|.+.        ..+.+|+.++.+++|+||+++++++.. 
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-   86 (325)
T 3kex_A            8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-   86 (325)
T ss_dssp             CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-
T ss_pred             hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-
Confidence            45677889999999999999999999864111 12348888773        346789999999999999999999864 


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ ++|+|.+++...                              +||+                       
T Consensus        87 ~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           87 SSLQLVTQYL-PLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             SSEEEEEECC-TTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             CccEEEEEeC-CCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence            4689999999 999999988653                              3333                       


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             .....++.++||||||+++|||+++ |..||.+....+....+....       ...
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~-------~~~  237 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF-GAEPYAGLRLAEVPDLLEKGE-------RLA  237 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTSCTTHHHHHHHTTC-------BCC
T ss_pred             CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhC-CCCCccccCHHHHHHHHHcCC-------CCC
Confidence                                   2224578899999999999999994 358998887777766665432       345


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+..++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          238 QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            56678889999999999999999999999999999983

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=6e-29  Score=203.42  Aligned_cols=170  Identities=17%  Similarity=0.287  Sum_probs=140.1

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      ++..+.||+|+||.||+|....   +++.||||.+.       +.+.+|+.++.+++|+||+++++++...+..+++|||
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhccEEeccCCCeEEEEEEECC---CCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence            6667899999999999998865   68999999984       5588999999999999999999999988889999999


Q ss_pred             ccccCCHHHHhhhC----------------------------Cccc----------------------------------
Q psy796          106 PAQLGDLVQHLNSA----------------------------DNLT----------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~----------------------------r~l~----------------------------------  123 (228)
                      + ++++|.+++...                            +||+                                  
T Consensus       124 ~-~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  202 (321)
T 2c30_A          124 L-QGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV  202 (321)
T ss_dssp             C-CSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred             C-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccccc
Confidence            9 999999987643                            3333                                  


Q ss_pred             ----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHH
Q psy796          124 ----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLM  193 (228)
Q Consensus       124 ----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  193 (228)
                                .....++.++||||||+++|||++  |..||.+.+..+....+.....     +....+..++.++.+++
T Consensus       203 gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li  275 (321)
T 2c30_A          203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD--GEPPYFSDSPVQAMKRLRDSPP-----PKLKNSHKVSPVLRDFL  275 (321)
T ss_dssp             SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSSC-----CCCTTGGGSCHHHHHHH
T ss_pred             CCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcCCC-----CCcCccccCCHHHHHHH
Confidence                      223457889999999999999999  6789988877766665544311     12223445788999999


Q ss_pred             HHhhccCCCCCCCHHHHHHH
Q psy796          194 CDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       194 ~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+||+.+|.+|||+.+++++
T Consensus       276 ~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          276 ERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHccCChhhCcCHHHHhcC
Confidence            99999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=6.2e-29  Score=199.58  Aligned_cols=176  Identities=16%  Similarity=0.267  Sum_probs=145.3

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ....+..++|++.+.||+|+||.||+|....   .+..||+|.+.          ..+.+|++++..++|+||+++++++
T Consensus         7 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   83 (284)
T 2vgo_A            7 PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQ---NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF   83 (284)
T ss_dssp             ---CCCGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CccchhhhhceeeheecCCCCeEEEEEEEcC---CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            3445666789999999999999999998865   67899999883          4478899999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      ...+..+++|||+ ++|+|.+++...                             +||+                     
T Consensus        84 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           84 HDRKRIYLMLEFA-PRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             ECSSEEEEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EcCCEEEEEEEeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccc
Confidence            9988899999999 999999988643                             2222                     


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           .....++.++||||||++++||++  |..||...+..+....+...        ....|
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~--------~~~~~  232 (284)
T 2vgo_A          163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV--GMPPFDSPSHTETHRRIVNV--------DLKFP  232 (284)
T ss_dssp             ECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTT--------CCCCC
T ss_pred             cCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH--CCCCCCCCCHhHHHHHHhcc--------ccCCC
Confidence                                 223457889999999999999999  67999887777666555432        33456


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            7789999999999999999999999999973

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=2.2e-28  Score=196.99  Aligned_cols=183  Identities=23%  Similarity=0.399  Sum_probs=142.8

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...++|..++|++.+.||+|+||.||+|...      ..||+|.++         ..+.+|+.++++++|+||++++++.
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS   89 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESS------SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEc------CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence            4678999999999999999999999999763      259999884         5588999999999999999999966


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                       .....+++|||+ ++++|.+++...                              +||+                    
T Consensus        90 -~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  167 (289)
T 3og7_A           90 -TAPQLAIVTQWC-EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA  167 (289)
T ss_dssp             -CSSSCEEEEECC-CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred             -cCCccEEEEEec-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceec
Confidence             445689999999 999999988533                              3333                    


Q ss_pred             --------------------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH-HHHHHHhhhCC
Q psy796          124 --------------------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGG  173 (228)
Q Consensus       124 --------------------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~-~~~~~~~~~~~  173 (228)
                                                .   ....++.++||||||+++|||++  +..||.+....+. ...+...... 
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~-  244 (289)
T 3og7_A          168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIEMVGRGSLS-  244 (289)
T ss_dssp             ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH--SSCTTSSCCCHHHHHHHHHHTSCC-
T ss_pred             cccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH--CCCCccccchHHHHHHHhcccccC-
Confidence                                      0   13456779999999999999999  6789987665543 3333332111 


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                        ......+..++.++.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       245 --~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          245 --PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             --CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             --cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence              0011224578899999999999999999999999999999873

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=3.8e-29  Score=207.95  Aligned_cols=173  Identities=20%  Similarity=0.254  Sum_probs=142.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++..++||||+++++++.+.+..++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            468899999999999999998865   68899999983         457899999999999999999999999989999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++|+|.+++...                             +||+                             
T Consensus       106 v~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          106 VFDLV-TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             EECCC-CSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             EEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence            99999 999998887543                             3333                             


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++|||||||++|||++  |..||.+.+.......+.......    ..+....++
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~Pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~  258 (362)
T 2bdw_A          185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV--GYPPFWDEDQHRLYAQIKAGAYDY----PSPEWDTVT  258 (362)
T ss_dssp             CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCCC----CTTGGGGSC
T ss_pred             cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhCCCCC----CcccccCCC
Confidence                             223367889999999999999999  679999888777777665542110    111124578


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++.+||+.||.+|||+.+++++
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          259 PEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            999999999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=8.3e-29  Score=201.40  Aligned_cols=187  Identities=27%  Similarity=0.522  Sum_probs=149.0

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILG   91 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g   91 (228)
                      ...|++..++|++.+.||+|+||.||+|.+..  ....++.||+|.++        ..+.+|+.++.++ +|+||+++++
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            35778899999999999999999999998653  12267899999984        3578999999999 7999999999


Q ss_pred             eeeCCC-CCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc--
Q psy796           92 VCTGEQ-PPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT--  123 (228)
Q Consensus        92 ~~~~~~-~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~--  123 (228)
                      ++...+ ..+++|||+ ++|+|.+++...                                             +||+  
T Consensus        99 ~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~  177 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  177 (316)
T ss_dssp             EECCTTSCCEEEEECC-TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCceEEEEEcC-CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence            987654 589999999 999999998643                                             2222  


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  .....++.++||||||+++|||+++ |..||.+...
T Consensus       178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~-g~~p~~~~~~  256 (316)
T 2xir_A          178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKI  256 (316)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCC
T ss_pred             eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC-CCCCCcccch
Confidence                                                        1234568899999999999999985 3588877664


Q ss_pred             HH-HHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          160 EQ-VIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       160 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .. ....+....       ....+..++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       257 ~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          257 DEEFCRRLKEGT-------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             SHHHHHHHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHhccCc-------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            43 333333321       33456678999999999999999999999999999999983

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=9.3e-29  Score=198.89  Aligned_cols=185  Identities=30%  Similarity=0.554  Sum_probs=143.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.+.||+|+||.||+|.+.........||+|.++          ..+.+|+.++.+++|+||+++++++.
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   91 (291)
T 1u46_A           12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL   91 (291)
T ss_dssp             CEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence            45677788999999999999999999976433244579999884          45779999999999999999999997


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      ... .+++|||+ ++++|.+++...                              +||+                     
T Consensus        92 ~~~-~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           92 TPP-MKMVTELA-PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             SSS-CEEEEECC-TTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCC-ceeeEecc-cCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccc
Confidence            664 89999999 999999988642                              2333                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||+++ +..||.+.+..+....+....      .
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~------~  242 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY-GQEPWIGLNGSQILHKIDKEG------E  242 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTSC------C
T ss_pred             cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCcccCCHHHHHHHHHccC------C
Confidence                                      1122357789999999999999984 358998888777666554321      1


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..+.+..++.++.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          243 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            34456678999999999999999999999999999999983

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=6.5e-29  Score=213.13  Aligned_cols=173  Identities=21%  Similarity=0.296  Sum_probs=145.3

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+.-.+|.+.+.||+|+||.||+|....   +++.||||+++          ..+.+|+.+++.++||||+++++++...
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~   88 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHEL---TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP   88 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETT---TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3445678999999999999999999865   78999999984          3478999999999999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +..+++|||+ ++|+|.+++...                             +||+                        
T Consensus        89 ~~~~lv~E~~-~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           89 SDIFMVMEYV-SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             SEEEEEEECC-SSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             CEEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            8999999999 999999998654                             3333                        


Q ss_pred             -------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 -------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 -------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                         ..+.. .+.++||||||+++|||++  |..||.+.+.......+...        ....|.
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~--------~~~~p~  237 (476)
T 2y94_A          168 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC--GTLPFDDDHVPTLFKKICDG--------IFYTPQ  237 (476)
T ss_dssp             TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH--SSCSSCCSSSHHHHHHHHTT--------CCCCCT
T ss_pred             ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh--CCCCCCCCCHHHHHHHHhcC--------CcCCCc
Confidence                               11222 3678999999999999999  67999988877777666543        334567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.++.+++.+||+.||.+|||+.+++++
T Consensus       238 ~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          238 YLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            789999999999999999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.5e-29  Score=207.75  Aligned_cols=173  Identities=22%  Similarity=0.358  Sum_probs=142.9

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhC-CCCCcceeeeeee
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSL-QDPNLVSILGVCT   94 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l-~h~niv~~~g~~~   94 (228)
                      ..+..++|++.++||+|+||.||++....   +++.||+|.++.          .+.+|..++..+ +||||+++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~   88 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ   88 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence            34667889999999999999999999875   789999999852          356788888876 8999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      +.+..++||||+ ++|+|.+++...                             |||+                      
T Consensus        89 ~~~~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           89 TKENLFFVMEYL-NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             CSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             eCCEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            999999999999 999999988653                             3443                      


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            ..+..++.++||||||+++|||++  |..||.+.+..++...+...        ....
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~--------~~~~  237 (345)
T 1xjd_A          168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI--GQSPFHGQDEEELFHSIRMD--------NPFY  237 (345)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCC
T ss_pred             cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc--CCCCCCCCCHHHHHHHHHhC--------CCCC
Confidence                                  234467899999999999999999  67999988888777766543        2345


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHH-HHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFK-QIYS  212 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~-~v~~  212 (228)
                      |..++.++.+++.+||+.+|.+||++. ++++
T Consensus       238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            677899999999999999999999997 6654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=7.7e-29  Score=205.97  Aligned_cols=175  Identities=23%  Similarity=0.310  Sum_probs=136.9

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ....++|++.+.||+|+||.||++....   .+..||+|.+.      ..+.+|+.+++.++|+||+++++++...+..+
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   92 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDKL---TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA   92 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEETT---TCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence            4456789999999999999999999875   78899999884      66889999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++|+|.+++...                             +||+                            
T Consensus        93 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           93 IIMEYA-SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             EEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             EEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            999999 999999987543                             3333                            


Q ss_pred             -----------------cccCCCC-CccchHHHHHHHHHHHhcCCCCCCCCCChH----HHHHHHHHhhhCCCccccCCC
Q psy796          124 -----------------RDRDRYT-CQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 -----------------~~~~~~~-~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                       +.+..++ .++||||||+++|||++  |..||.+....    .....+...      ....+.
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~~~~~~~~~------~~~~~~  243 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV--GAYPFEDPEEPRDYRKTIQRILSV------KYSIPD  243 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHH--SSCSCC----CCCHHHHHHHHHTT------CCCCCT
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHh--CCCCCCCCccHHHHHHHHHHHhcC------CCCCCC
Confidence                             1222333 44899999999999999  66899875442    222222211      112333


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...++.++.+|+.+||+.+|.+|||+.++++|
T Consensus       244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          244 DIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            44688999999999999999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.96  E-value=2.5e-28  Score=200.18  Aligned_cols=173  Identities=20%  Similarity=0.261  Sum_probs=141.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|++.+.||+|+||.||++....   ++..||+|.++             ..+.+|+.++..++||||+++++++....
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cceEeceEEeeCCCeEEEEEEECC---CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            357889999999999999999865   68899999873             45889999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                             +||+                         
T Consensus        88 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           88 DVILILELV-AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             EEEEEEECC-CSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEEEEcC-CCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            899999999 999999998654                             2322                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||++  |..||.+.+..+....+.......    ....
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~  240 (326)
T 2y0a_A          167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS--GASPFLGDTKQETLANVSAVNYEF----EDEY  240 (326)
T ss_dssp             ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHHTCCCC----CHHH
T ss_pred             ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH--CcCCCCCCCHHHHHHHHHhcCCCc----Cccc
Confidence                                  223467889999999999999999  679998887777666655432110    0011


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++.+++.+||+.||.+|||+.+++++
T Consensus       241 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            35678999999999999999999999999873

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=9.2e-29  Score=207.26  Aligned_cols=173  Identities=17%  Similarity=0.274  Sum_probs=143.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.|++.+.||+|+||.||+|....   ++..||+|.+.       ..+.+|+.++..++|+||+++++++.+....+++|
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECC---CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            468899999999999999998865   68899999884       45789999999999999999999999988999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ ++|+|.+++...                              +||+                              
T Consensus       128 E~~-~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          128 EFL-SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             ECC-CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             EcC-CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            999 999999988643                              3333                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++|||||||++|||++  |..||.+.+..+....+......    ........++.+
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~  280 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS--GLSPFAGEDDLETLQNVKRCDWE----FDEDAFSSVSPE  280 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHHCCCC----CCSSTTTTSCHH
T ss_pred             eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCccccccCCHH
Confidence                           233457889999999999999999  67999988877776666543211    112234568899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+++.+||+.||.+|||+.+++++
T Consensus       281 ~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          281 AKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhhC
Confidence            9999999999999999999999874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=2.3e-28  Score=197.68  Aligned_cols=190  Identities=27%  Similarity=0.485  Sum_probs=142.2

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEec-cCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETED-IELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~-~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      .+...+....|++.+.||+|+||.||++.+.. ....+..||+|.++        ..+.+|+.++..++|+||+++++++
T Consensus        13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   92 (302)
T 4e5w_A           13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC   92 (302)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            45566777789999999999999999998632 11267999999985        5578999999999999999999999


Q ss_pred             eCC--CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------
Q psy796           94 TGE--QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------  123 (228)
Q Consensus        94 ~~~--~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------  123 (228)
                      ...  +..+++|||+ ++|+|.+++...                              +||+                  
T Consensus        93 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           93 TEDGGNGIKLIMEFL-PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EC---CCEEEEEECC-TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             ecCCCceEEEEEEeC-CCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc
Confidence            876  5679999999 999999998432                              3333                  


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC-----------ChHHHH
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL-----------TNEQVI  163 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-----------~~~~~~  163 (228)
                                                   .....++.++||||||+++|||++|  ..|+...           ......
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g--~~p~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 4e5w_A          172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY--CDSDSSPMALFLKMIGPTHGQMTV  249 (302)
T ss_dssp             TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT--TCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred             ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHc--cCCCcchhhHHhhccCCcccccCH
Confidence                                         1123456789999999999999995  3543211           001111


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..+........   ..+.+..+++++.+++.+||+.+|.+|||+.++++.|+.+.
T Consensus       250 ~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          250 TRLVNTLKEGK---RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccC---CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            11111111111   34567789999999999999999999999999999999873

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.5e-28  Score=201.57  Aligned_cols=182  Identities=25%  Similarity=0.471  Sum_probs=147.4

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .+...+|++.+.||+|+||.||+|.+..... ....|++|.+.        ..+.+|+.++.+++|+||+++++++....
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            4567889999999999999999999864111 12346777662        56889999999999999999999998764


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                       .+++++|+ .+|+|.+++...                              +||+                        
T Consensus        91 -~~~v~~~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           91 -VQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             -EEEEECCC-SSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             -ceEEEEec-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence             78999999 999999988653                              3333                        


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            ..+..++.++||||||+++|||+++ |..||.+.+.......+....       ..+.
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~-g~~p~~~~~~~~~~~~~~~~~-------~~~~  240 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGE-------RLPQ  240 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCGGGHHHHHHTTC-------CCCC
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHcCC-------CCCC
Confidence                                  2234578899999999999999995 358999888777766555432       3455


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +..++.++.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            7778999999999999999999999999999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=1e-28  Score=204.44  Aligned_cols=172  Identities=20%  Similarity=0.269  Sum_probs=137.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .+.|++.+.||+|+||.||++....   +++.||+|+++            ..+.+|+.++..++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRE---TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            3568899999999999999998865   78999999873            45789999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc---------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT---------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~---------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                                 +||+                     
T Consensus       100 ~~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A          100 MLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             EEEEEEECC-SSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             EEEEEEeCC-CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            999999999 999998776431                                 3333                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||++  |..||.+. .......+......    .
T Consensus       179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~-~~~~~~~i~~~~~~----~  251 (351)
T 3c0i_A          179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS--GCLPFYGT-KERLFEGIIKGKYK----M  251 (351)
T ss_dssp             TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCSS-HHHHHHHHHHTCCC----C
T ss_pred             ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHH--CCCCCCCc-HHHHHHHHHcCCCC----C
Confidence                                      223457899999999999999999  66899774 33444444332110    0


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .......++.++.+++.+||+.||.+|||+.++++
T Consensus       252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            01112567899999999999999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.96  E-value=1e-28  Score=204.31  Aligned_cols=173  Identities=18%  Similarity=0.201  Sum_probs=135.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.|++.+.||+|+||.||+|....   .++.||+|.++     +.+.+|+.++.+++|+||+++++++...+..+++|||
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKG---TQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECC---CCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            458899999999999999999865   67899999985     4477899999999999999999999998889999999


Q ss_pred             ccccCCHHHHhhhC-----------------------------Cccc---------------------------------
Q psy796          106 PAQLGDLVQHLNSA-----------------------------DNLT---------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~-----------------------------r~l~---------------------------------  123 (228)
                      + ++|+|.+++...                             +||+                                 
T Consensus       130 ~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  208 (349)
T 2w4o_A          130 V-TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK  208 (349)
T ss_dssp             C-CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             C-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence            9 999999988654                             3333                                 


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH-HHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ-VIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                   ..+..++.++||||||+++|||++  |..||....... ....+....    .....+....++.++
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~  282 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC--GFEPFYDERGDQFMFRRILNCE----YYFISPWWDEVSLNA  282 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCTTCCTTCHHHHHHHHHTTC----CCCCTTTTTTSCHHH
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh--CCCCCCCCcccHHHHHHHHhCC----CccCCchhhhCCHHH
Confidence                         223457899999999999999999  568887665543 444443321    111122235688999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.||.+|||+.+++++
T Consensus       283 ~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          283 KDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=9.5e-29  Score=206.86  Aligned_cols=174  Identities=18%  Similarity=0.356  Sum_probs=141.5

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.++..++||||+++++++.
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~   85 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKND---TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ   85 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            345666789999999999999999998875   78899999884          34678999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      +.+..+++|||+ .+|+|.+++...                             |||+                      
T Consensus        86 ~~~~~~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           86 DEEDMFMVVDLL-LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             CSSEEEEEECCC-TTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eCCEEEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence            999999999999 999999988754                             3333                      


Q ss_pred             ---------------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCcc
Q psy796          124 ---------------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~  176 (228)
                                           +   .+..++.++|||||||++|||++  |..||...+..   .....+...       
T Consensus       165 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ellt--G~~Pf~~~~~~~~~~~~~~~~~~-------  235 (384)
T 4fr4_A          165 LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR--GRRPYHIRSSTSSKEIVHTFETT-------  235 (384)
T ss_dssp             CCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHH--SSCSSCCCTTSCHHHHHHHHHHC-------
T ss_pred             ccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHh--CCCCCCCCCCccHHHHHHHHhhc-------
Confidence                                 1   13357889999999999999999  67899754433   333333221       


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCC-HHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPT-FKQIYS  212 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps-~~~v~~  212 (228)
                       ....|..++.++.+|+.+||+.+|.+||+ +.+|..
T Consensus       236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence             34567789999999999999999999998 777664

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=2.2e-28  Score=196.18  Aligned_cols=174  Identities=20%  Similarity=0.258  Sum_probs=142.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .++|++.+.||+|+||.||+|....   .+..||+|.+.         ..+.+|+.++.+++|+||+++++++...+..+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY   81 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcC---CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE
Confidence            3568999999999999999998865   68899999983         44778999999999999999999999888889


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ ++++|.+++...                             +||+                            
T Consensus        82 ~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           82 LVFDLV-TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999 999998876543                             2222                            


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++++|++  |..||.+.+.......+......    ...+....+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~  234 (284)
T 3kk8_A          161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV--GYPPFWDEDQHRLYAQIKAGAYD----YPSPEWDTV  234 (284)
T ss_dssp             SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCTTTTTTS
T ss_pred             CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH--CCCCCCCCchhHHHHHHHhcccc----CCchhhccc
Confidence                              223457889999999999999999  67999888877776666543211    112223568


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|.+|||+.+++++
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            8999999999999999999999999974

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=205.97  Aligned_cols=187  Identities=19%  Similarity=0.264  Sum_probs=150.8

Q ss_pred             cCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCccee
Q psy796           19 KCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSI   89 (228)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~   89 (228)
                      .....+.|+++.++|++.+.||+|+||.||+|...      ..|++|.++         ..+.+|+.++.+++|+||+++
T Consensus        21 ~~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~------~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   94 (319)
T 2y4i_B           21 TSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH------GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF   94 (319)
T ss_dssp             -CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEES------SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCC
T ss_pred             cccccccccCCHHHeEEeeEeccCCceEEEEEEEc------CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEE
Confidence            33456899999999999999999999999999874      248898884         446789999999999999999


Q ss_pred             eeeeeCCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------
Q psy796           90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------  123 (228)
Q Consensus        90 ~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------  123 (228)
                      ++++...+..+++|||+ ++++|.+++...                              +||+                
T Consensus        95 ~~~~~~~~~~~iv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Df  173 (319)
T 2y4i_B           95 MGACMSPPHLAIITSLC-KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDF  173 (319)
T ss_dssp             CEEEECSSCEEEECBCC-CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCC
T ss_pred             EEEEecCCceEEEeecc-cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeec
Confidence            99999988899999999 999999998653                              2222                


Q ss_pred             --------------------------------c---------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH
Q psy796          124 --------------------------------R---------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV  162 (228)
Q Consensus       124 --------------------------------~---------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~  162 (228)
                                                      .         ....++.++||||||+++|||++  +..||........
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~  251 (319)
T 2y4i_B          174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA--REWPFKTQPAEAI  251 (319)
T ss_dssp             SCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH--SSCSSSSCCHHHH
T ss_pred             CCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHH
Confidence                                            0         12346789999999999999999  6789998887776


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                      ...+.....      ....+..++.++.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus       252 ~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          252 IWQMGTGMK------PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHTTCC------CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHhccCCC------CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            665544321      1112346788999999999999999999999999999988443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=1.6e-28  Score=203.49  Aligned_cols=175  Identities=21%  Similarity=0.303  Sum_probs=144.0

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      ...+..++|++.++||+|+||.||++....   +++.||+|+++          ..+.+|..++..+ +|+||+++++++
T Consensus        14 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~   90 (353)
T 2i0e_A           14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF   90 (353)
T ss_dssp             -----CTTEEEEEEEEEETTEEEEEEEETT---EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred             cCCCchHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence            345667889999999999999999999865   67899999985          2357889999887 899999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      .+.+..++||||+ ++|+|.+++...                             |||+                     
T Consensus        91 ~~~~~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           91 QTMDRLYFVMEYV-NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  169 (353)
T ss_dssp             ECSSEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EcCCEEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence            9988999999999 999999988653                             3444                     


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             +....++.++|||||||++|||++  |..||.+.+..++...+...        ...
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--G~~Pf~~~~~~~~~~~i~~~--------~~~  239 (353)
T 2i0e_A          170 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--GQAPFEGEDEDELFQSIMEH--------NVA  239 (353)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCC
T ss_pred             ccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHc--CCCCCCCCCHHHHHHHHHhC--------CCC
Confidence                                   234567899999999999999999  67999988888777777653        344


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      .|..++.++.+++.+||+.+|.+||+     +.++++|
T Consensus       240 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            67789999999999999999999995     5777653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1.2e-28  Score=199.54  Aligned_cols=174  Identities=20%  Similarity=0.365  Sum_probs=144.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      -+.+.|++.+.||+|+||.||+|....   .+..||+|.+.        ..+.+|+.++..++|+||+++++++......
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   95 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL   95 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECC---CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence            345668999999999999999998765   68899999883        5688999999999999999999999988889


Q ss_pred             eEEEeeccccCCHHHHhhhC----------------------------Cccc----------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA----------------------------DNLT----------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~----------------------------r~l~----------------------------  123 (228)
                      +++|||+ ++++|.+++...                            +||+                            
T Consensus        96 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A           96 WIIMEYL-GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             EEEEECC-TTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred             EEEEEeC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence            9999999 999999988653                            2332                            


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      .....++.++||||||+++|||++  |..||...........+....       ....+..++.
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  245 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR--GEPPHSELHPMKVLFLIPKNN-------PPTLEGNYSK  245 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSC-------CCCCCSSCCH
T ss_pred             ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc--CCCCCCCcCHHHHHHHhhcCC-------CCCCccccCH
Confidence                            223457889999999999999999  678998877776655554321       2234567899


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFM  214 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l  214 (228)
                      ++.+++.+||+.+|.+|||+.+++++.
T Consensus       246 ~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          246 PLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence            999999999999999999999999753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=7.1e-29  Score=209.30  Aligned_cols=179  Identities=17%  Similarity=0.253  Sum_probs=147.8

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.++||+|+||.||++....   ++..||+|+++.          .+.+|+.++..++||||+++++++.
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~  139 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  139 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECC---CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            345667789999999999999999999876   788999999842          3678999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------------  123 (228)
                      +.+..++||||+ ++|+|.+++...                            |||+                       
T Consensus       140 ~~~~~~lV~E~~-~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          140 DDRYLYMVMEYM-PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             CSSEEEEEECCC-TTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ECCEEEEEEeCC-CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            998999999999 999999988653                            4444                       


Q ss_pred             ----------------------cccC----CCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 ----------------------RDRD----RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 ----------------------~~~~----~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                            +...    .++.++|||||||++|||++  |..||.+.+.......+.......    
T Consensus       219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~--G~~Pf~~~~~~~~~~~i~~~~~~~----  292 (410)
T 3v8s_A          219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV--GDTPFYADSLVGTYSKIMNHKNSL----  292 (410)
T ss_dssp             CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTHHHHC----
T ss_pred             ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh--CCCCCCCCChhhHHHHHHhccccc----
Confidence                                  1111    16789999999999999999  679999988888777776543211    


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                      ..+....++.++++|+.+||+.+|.+  ||++.+|++|
T Consensus       293 ~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          293 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            23344578999999999999999988  9999999874

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=1.2e-28  Score=201.25  Aligned_cols=189  Identities=29%  Similarity=0.544  Sum_probs=142.8

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEecc-CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      .+...+..+.+++.+.||+|+||.||++.+... ...++.||+|.++        ..+.+|++++++++|+||+++++++
T Consensus        23 g~~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (318)
T 3lxp_A           23 GDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC  102 (318)
T ss_dssp             -CCCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEE
Confidence            345556666679999999999999999877432 2267899999984        4478999999999999999999999


Q ss_pred             eCC--CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc--------------------
Q psy796           94 TGE--QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT--------------------  123 (228)
Q Consensus        94 ~~~--~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~--------------------  123 (228)
                      .+.  ...+++|||+ ++|+|.+++...                            +||+                    
T Consensus       103 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  181 (318)
T 3lxp_A          103 EDAGAASLQLVMEYV-PLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA  181 (318)
T ss_dssp             EETTTTEEEEEECCC-TTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             ecCCCceEEEEEecc-cCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccc
Confidence            874  4578999999 999999998664                            3333                    


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-----------HHHHH
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-----------QVIQN  165 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-----------~~~~~  165 (228)
                                                 .....++.++||||||++++||++  +..||......           .....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~~~~  259 (318)
T 3lxp_A          182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIAQGQMTVLR  259 (318)
T ss_dssp             EECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT--TTCGGGSHHHHHHHHHCSCCHHHHHHH
T ss_pred             ccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh--CCCcccccchhhhhhhcccccchhHHH
Confidence                                       112245678999999999999999  55777543211           01111


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +........   ..+.+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       260 ~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          260 LTELLERGE---RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhccc---CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            111111111   3455778899999999999999999999999999999998

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=6.8e-29  Score=207.12  Aligned_cols=171  Identities=18%  Similarity=0.268  Sum_probs=137.5

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHH-HhhCCCCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRF-LSSLQDPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~-l~~l~h~niv~~~g~   92 (228)
                      ....+..++|++.++||+|+||.||+++...   ++..||+|+++          ..+.+|..+ ++.++|+||++++++
T Consensus        31 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~  107 (373)
T 2r5t_A           31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKA---EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS  107 (373)
T ss_dssp             BCTTCCGGGEEEEEEEECCTTCEEEEEEETT---TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE
T ss_pred             CCCCCChhheEEEEEEeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence            4455677889999999999999999999875   68899999984          224556665 466899999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      +.+.+..++||||+ ++|+|.+++.+.                             |||+                    
T Consensus       108 ~~~~~~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a  186 (373)
T 2r5t_A          108 FQTADKLYFVLDYI-NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC  186 (373)
T ss_dssp             EECSSEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred             EEeCCEEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccc
Confidence            99999999999999 999999988653                             3443                    


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              +.+..++.++|||||||++|||++  |..||.+.+..+....+...        ..
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--G~~Pf~~~~~~~~~~~i~~~--------~~  256 (373)
T 2r5t_A          187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY--GLPPFYSRNTAEMYDNILNK--------PL  256 (373)
T ss_dssp             GGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCTTCCSBHHHHHHHHHHS--------CC
T ss_pred             cccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHhc--------cc
Confidence                                    234467899999999999999999  67999988888777776543        34


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFK  208 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~  208 (228)
                      ..+..++.++.+++.+||+.||.+||++.
T Consensus       257 ~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          257 QLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            45677899999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=3e-28  Score=210.21  Aligned_cols=172  Identities=23%  Similarity=0.384  Sum_probs=139.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .|++.+.||+|+||.||+|....   .+..||+|.++         ..+.+|+.+++.++||||+++++++......++|
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKV---THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETT---TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            48889999999999999999865   67899999884         4578999999999999999999999998899999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||| ++|+|.+++...                             +||+                              
T Consensus       115 ~e~~-~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          115 MECY-KGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             EECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             EecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            9999 999998877543                             3333                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     .....++.++|||||||++|+|++  |..||.+.+..+....+......    ...+....++.+
T Consensus       194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~  267 (494)
T 3lij_A          194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLA--GYPPFGGQTDQEILRKVEKGKYT----FDSPEWKNVSEG  267 (494)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCSGGGTTSCHH
T ss_pred             cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCchhcccCCHH
Confidence                           112357889999999999999999  67999998888877777654321    011223568899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++++.+||+.+|.+|||+.++++|
T Consensus       268 ~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          268 AKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHHHHHCCCChhhCccHHHHhcC
Confidence            9999999999999999999999963

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=1.6e-28  Score=205.00  Aligned_cols=168  Identities=18%  Similarity=0.288  Sum_probs=132.9

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      ..+.||+|+||.||+|....   .+..||+|.++       ..+.+|++++.+++|+||+++++++...+..++||||+ 
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~-  168 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETA---TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV-  168 (373)
T ss_dssp             EEEECC-----CEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred             cceEEecCcCEEEEEEEEcC---CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC-
Confidence            35789999999999998865   78899999884       55889999999999999999999999988899999999 


Q ss_pred             ccCCHHHHhhhC------------------------------Cccc----------------------------------
Q psy796          108 QLGDLVQHLNSA------------------------------DNLT----------------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~------------------------------r~l~----------------------------------  123 (228)
                      ++|+|.+++...                              +||+                                  
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~  248 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN  248 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence            999998887543                              3333                                  


Q ss_pred             -----------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHH
Q psy796          124 -----------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL  192 (228)
Q Consensus       124 -----------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  192 (228)
                                 .....++.++||||||+++|||++  |..||.+.+..+....+......    ........+++++.+|
T Consensus       249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l  322 (373)
T 2x4f_A          249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS--GLSPFLGDNDAETLNNILACRWD----LEDEEFQDISEEAKEF  322 (373)
T ss_dssp             CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHTCCC----SCSGGGTTSCHHHHHH
T ss_pred             cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhccCC----CChhhhccCCHHHHHH
Confidence                       223456789999999999999999  67999988877776666543211    0111235688999999


Q ss_pred             HHHhhccCCCCCCCHHHHHH
Q psy796          193 MCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       193 i~~c~~~~p~~Rps~~~v~~  212 (228)
                      +.+||+.+|.+|||+.++++
T Consensus       323 i~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=1.2e-28  Score=206.60  Aligned_cols=184  Identities=15%  Similarity=0.245  Sum_probs=139.4

Q ss_pred             CcccccCCCceeeeeeccc--ceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSC--HLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G--~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      +.+.....+|++.+.||+|  +||.||++....   ++..||+|.++         ..+.+|+.+++.++|+||++++++
T Consensus        18 s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~   94 (389)
T 3gni_B           18 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKP---TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT   94 (389)
T ss_dssp             CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hcccCCCCcEEEEecccCCcCCceEEEEEEEcC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEE
Confidence            3445566789999999999  999999999876   78999999984         446789999999999999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~------------------  123 (228)
                      +...+..++||||+ ++|+|.+++...                               |||+                  
T Consensus        95 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg  173 (389)
T 3gni_B           95 FIADNELWVVTSFM-AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR  173 (389)
T ss_dssp             EEETTEEEEEEECC-TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGG
T ss_pred             EEECCEEEEEEEcc-CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccc
Confidence            99999999999999 999999988643                               3333                  


Q ss_pred             ---------------------------------ccc--CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q psy796          124 ---------------------------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH  168 (228)
Q Consensus       124 ---------------------------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~  168 (228)
                                                       +..  ..++.++|||||||++|||++  |..||.+.+..+.......
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~  251 (389)
T 3gni_B          174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN--GHVPFKDMPATQMLLEKLN  251 (389)
T ss_dssp             GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHH--SSCTTTTCCSTTHHHHC--
T ss_pred             cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHhc
Confidence                                             111  457899999999999999999  6789987655433322211


Q ss_pred             hhhCC--------------------------------------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy796          169 MYYGG--------------------------------------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI  210 (228)
Q Consensus       169 ~~~~~--------------------------------------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v  210 (228)
                      .....                                      ......+.+..++.++.+|+.+||+.||.+|||+.++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el  331 (389)
T 3gni_B          252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL  331 (389)
T ss_dssp             ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             CCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            10000                                      0000112345578899999999999999999999999


Q ss_pred             HHH
Q psy796          211 YSF  213 (228)
Q Consensus       211 ~~~  213 (228)
                      +++
T Consensus       332 l~h  334 (389)
T 3gni_B          332 LNH  334 (389)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=2e-28  Score=201.73  Aligned_cols=179  Identities=19%  Similarity=0.261  Sum_probs=142.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      -.++|++.+.||+|+||.||+|....   .+..||+|.+.            ..+.+|+.++++++|+||+++++++.+.
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQ---TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhheeecceeeecCCeEEEEEEECC---CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            34558999999999999999998865   78899999873            4578899999999999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhh----------------------------------------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNS----------------------------------------------------------  118 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~----------------------------------------------------------  118 (228)
                      +..++||||+ ++|+|.+++..                                                          
T Consensus       101 ~~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          101 QYICLVMELC-HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SEEEEEEECC-CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCC-CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            8899999999 99999988741                                                          


Q ss_pred             -----------CCccc--------------------------------------------------c--ccCCCCCccch
Q psy796          119 -----------ADNLT--------------------------------------------------R--DRDRYTCQSNV  135 (228)
Q Consensus       119 -----------~r~l~--------------------------------------------------~--~~~~~~~~~Dv  135 (228)
                                 ++||+                                                  +  ....++.++||
T Consensus       180 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di  259 (345)
T 3hko_A          180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA  259 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred             HHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence                       02222                                                  1  12567889999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--
Q psy796          136 WSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--  213 (228)
Q Consensus       136 ~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--  213 (228)
                      ||||+++|||++  |..||.+.+..+....+......    ...+....++.++.+++.+||+.+|.+|||+.+++++  
T Consensus       260 wslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          260 WSAGVLLHLLLM--GAVPFPGVNDADTISQVLNKKLC----FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW  333 (345)
T ss_dssp             HHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC----TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred             HHHHHHHHHHHH--CCCCCCCCChHHHHHHHHhcccc----cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence            999999999999  67899988887766665543210    0111123478999999999999999999999999974  


Q ss_pred             HHHH
Q psy796          214 MKRS  217 (228)
Q Consensus       214 l~~~  217 (228)
                      ++.+
T Consensus       334 ~~~~  337 (345)
T 3hko_A          334 ISQF  337 (345)
T ss_dssp             HHTT
T ss_pred             hccC
Confidence            4444

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=8.2e-29  Score=211.18  Aligned_cols=174  Identities=20%  Similarity=0.308  Sum_probs=140.5

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.+.||+|+||.||++....   .+..||+|.++          ..+.+|+.++..++|+||+++++++.
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~  218 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ  218 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcC---CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe
Confidence            344566789999999999999999998865   78999999985          23567889999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      ..+..++||||+ ++|+|.+++...                              |||+                     
T Consensus       219 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~  297 (446)
T 4ejn_A          219 THDRLCFVMEYA-NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK  297 (446)
T ss_dssp             ETTEEEEEECCC-SSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred             eCCEEEEEEeeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCce
Confidence            998999999999 999998876432                              3444                     


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             +....++.++||||||+++|||++  |..||.+.+.......+...        ...
T Consensus       298 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~--------~~~  367 (446)
T 4ejn_A          298 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHEKLFELILME--------EIR  367 (446)
T ss_dssp             TTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCC
T ss_pred             eccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhh--CCCCCCCCCHHHHHHHHHhC--------CCC
Confidence                                   234567899999999999999999  67999988887777666543        344


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYS  212 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~  212 (228)
                      .|..++.++.+|+.+||+.||.+||     ++.++++
T Consensus       368 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          368 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            5778899999999999999999999     9999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.7e-28  Score=198.35  Aligned_cols=179  Identities=15%  Similarity=0.138  Sum_probs=141.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      .-++|++.+.||+|+||.||++....   .++.||+|.+.          ..+.+|+.++.+++|+||+++++++...+.
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTV---RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcC---CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            34679999999999999999998765   68899999984          457889999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .+++|||+ ++++|.+++...                             +||+                          
T Consensus       109 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          109 LYVDMRLI-NGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEEECC-CCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEEEEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            99999999 989999988653                             2222                          


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||+++|||++  +..||.+.+.......+....     ......+..
T Consensus       188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~  260 (309)
T 2h34_A          188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT--GSPPYQGDQLSVMGAHINQAI-----PRPSTVRPG  260 (309)
T ss_dssp             ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHH--SSCSSCSCHHHHHHHHHHSCC-----CCGGGTSTT
T ss_pred             ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHH--CCCCCCCchHHHHHHHhccCC-----CCccccCCC
Confidence                               223456789999999999999999  678998766554333332211     101223567


Q ss_pred             CcHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHh
Q psy796          185 CPRDIYDLMCDCWKRDQTMRP-TFKQIYSFMKRST  218 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rp-s~~~v~~~l~~~~  218 (228)
                      ++.++.+++.+||+.+|.+|| +++++++.|+.+.
T Consensus       261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            889999999999999999999 9999999999883

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=4.1e-28  Score=193.83  Aligned_cols=173  Identities=22%  Similarity=0.308  Sum_probs=143.2

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+..++|.+.+.||+|+||.||+|....   +++.||+|.+.          ..+.+|+.+++.++|+||+++++++...
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   83 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQL---TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP   83 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEECC---CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            3445678999999999999999999865   68899999884          3567899999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +..+++|||+ ++++|.+++...                             +||+                        
T Consensus        84 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           84 TDFFMVMEYV-SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             SEEEEEEECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             CeEEEEEecc-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            8899999999 999999988643                             2222                        


Q ss_pred             -------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 -------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 -------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                         ..... .+.++||||||++++||++  +..||...+.......+...        ....|.
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~  232 (276)
T 2h6d_A          163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC--GTLPFDDEHVPTLFKKIRGG--------VFYIPE  232 (276)
T ss_dssp             C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCT
T ss_pred             CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHhhcC--------cccCch
Confidence                               11122 2578999999999999999  67899887777766665543        234567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.++.+++.+||+.+|.+|||+.+++++
T Consensus       233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          233 YLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            789999999999999999999999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=3.5e-28  Score=195.50  Aligned_cols=172  Identities=23%  Similarity=0.327  Sum_probs=138.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +.|.+.+.||+|+||.||++....   .+..||+|.+.        ..+.+|++++++++|+||+++++++......+++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERS---SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEcc---CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            358889999999999999998865   68899999883        5578999999999999999999999988889999


Q ss_pred             EeeccccCCHHHHhhhC---------------------------------Cccc--------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA---------------------------------DNLT--------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~---------------------------------r~l~--------------------------  123 (228)
                      |||+ ++|+|.+++...                                 +||+                          
T Consensus        99 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A           99 METC-EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             ECCC-SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             EEeC-CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            9999 999999887431                                 3333                          


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||++++||++  |..||.+.+..+...........     .......
T Consensus       178 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~  250 (285)
T 3is5_A          178 KSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLT--GCLPFTGTSLEEVQQKATYKEPN-----YAVECRP  250 (285)
T ss_dssp             ---------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC-----CCC--CC
T ss_pred             CCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHh--CCCCCCCCCHHHHHhhhccCCcc-----cccccCc
Confidence                               112346778999999999999999  67999988877666555432110     1112234


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++++.+++.+||+.||.+|||+.+++++
T Consensus       251 ~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          251 LTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            78999999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=3.3e-28  Score=201.03  Aligned_cols=171  Identities=16%  Similarity=0.272  Sum_probs=137.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeeeeeeCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILGVCTGE   96 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g~~~~~   96 (228)
                      +..++|++.+.||+|+||.||+++...   +++.||+|.++          ..+.+|+.++.++ +||||+++++++.+.
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~   82 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE   82 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC
Confidence            455679999999999999999999875   78999999984          2367899999887 899999999999999


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                      +..+++|||+ ++|+|.+++...                             |||+                        
T Consensus        83 ~~~~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           83 SRLFFVIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             SEEEEEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             CEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            8999999999 999999888643                             3443                        


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC---------hHHHHHHHHHhhhCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT---------NEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~---------~~~~~~~~~~~~~~~~  174 (228)
                                          .....++.++|||||||++|||++  |..||....         ...+...+...     
T Consensus       162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-----  234 (345)
T 3a8x_A          162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK-----  234 (345)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCTTTTTTC-------CHHHHHHHHHHC-----
T ss_pred             CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh--CCCCcCCcccccccccccHHHHHHHHHcC-----
Confidence                                223467889999999999999999  668986532         12223333221     


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCH------HHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF------KQIYS  212 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~------~~v~~  212 (228)
                         ....|..++.++.+++.+||+.||.+||++      .++++
T Consensus       235 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          235 ---QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             ---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             ---CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence               344567889999999999999999999995      56654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1.4e-28  Score=198.84  Aligned_cols=173  Identities=18%  Similarity=0.263  Sum_probs=133.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------------------------HHHHHHH
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------------------------GDSLREI   75 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------------------------~~~~~e~   75 (228)
                      ..++|++.+.||+|+||.||+|....   .++.||+|.+.                                 +.+.+|+
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   87 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNEN---DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI   87 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETT---TTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECC---CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence            34578999999999999999998765   78999999883                                 2478899


Q ss_pred             HHHhhCCCCCcceeeeeeeC--CCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc--
Q psy796           76 RFLSSLQDPNLVSILGVCTG--EQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT--  123 (228)
Q Consensus        76 ~~l~~l~h~niv~~~g~~~~--~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~--  123 (228)
                      +++++++|+||+++++++..  ....+++|||+ ++++|.+++...                            +||+  
T Consensus        88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~  166 (298)
T 2zv2_A           88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV-NQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPS  166 (298)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECC-TTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecC-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence            99999999999999999976  44679999999 988886644322                            3443  


Q ss_pred             ------------------------------------------cccCC---CCCccchHHHHHHHHHHHhcCCCCCCCCCC
Q psy796          124 ------------------------------------------RDRDR---YTCQSNVWSFAVTLWEILSLCRDKPFPHLT  158 (228)
Q Consensus       124 ------------------------------------------~~~~~---~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~  158 (228)
                                                                .....   ++.++||||||+++|||++  |..||.+.+
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~  244 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF--GQCPFMDER  244 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHH--SSCSSCCSS
T ss_pred             HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHH--CCCCCCCcc
Confidence                                                      11111   3677899999999999999  678998877


Q ss_pred             hHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          159 NEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .......+.....      ..+....+++++.+++.+||+.||.+|||+.++++|
T Consensus       245 ~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          245 IMCLHSKIKSQAL------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHHHHHHHHCCC------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHHHHHHhcccC------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            7666555543211      223345788999999999999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=3.5e-28  Score=196.61  Aligned_cols=175  Identities=19%  Similarity=0.344  Sum_probs=142.3

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      -..+.|++.+.||+|+||.||+|....   .+..||+|.+.       ..+.+|+.++..++|+||+++++++...+..+
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   92 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW   92 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETT---TCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcC---CCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence            345678999999999999999999865   68899999884       56789999999999999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++++|.+++...                              +||+                           
T Consensus        93 lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           93 IMIEFC-PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEEECC-TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEEeC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999 999999887541                              2332                           


Q ss_pred             -----------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 -----------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 -----------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                       .     ....++.++||||||+++|||++  +..||...+.......+.....     +....
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~  244 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ--IEPPHHELNPMRVLLKIAKSDP-----PTLLT  244 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSCC-----CCCSS
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc--CCCCCccCCHHHHHHHHhccCC-----cccCC
Confidence                             1     34567889999999999999999  6789988877766555443211     12233


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       245 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            56678999999999999999999999999863

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=1.6e-28  Score=201.87  Aligned_cols=171  Identities=17%  Similarity=0.202  Sum_probs=142.4

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ..++|.+.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.++..++|+||+++++++.+.+.
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  115 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF  115 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe
Confidence            34578889999999999999998865   67899999873          457889999999999999999999999888


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .+++|||+ ++++|.+++...                             +||+                          
T Consensus       116 ~~lv~e~~-~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          116 VFVVLELC-RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             EEEEECCC-TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEecC-CCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence            99999999 999999887543                             3333                          


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||+++|||++  +..||......+....+...        ....+..+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~--------~~~~~~~~  264 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV--GKPPFETSCLKETYLRIKKN--------EYSIPKHI  264 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHT--------CCCCCTTS
T ss_pred             cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHH--CcCCCCCCCHHHHHHHHhcC--------CCCCCccC
Confidence                              123346789999999999999999  67899887776665555433        23456678


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.||.+|||+.+++++
T Consensus       265 ~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          265 NPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=1.7e-28  Score=196.38  Aligned_cols=173  Identities=19%  Similarity=0.319  Sum_probs=141.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC--CCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG--EQPP   99 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~   99 (228)
                      ++|++.+.||+|+||.||++....   +++.||+|.+.         ..+.+|+.++++++|+||+++++++..  ....
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             hheeeehhccCCCCcEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            568899999999999999998865   78899999883         457899999999999999999998753  4568


Q ss_pred             eEEEeeccccCCHHHHhhhC--------------------------------------Cccc------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA--------------------------------------DNLT------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~--------------------------------------r~l~------------------  123 (228)
                      +++|||+ ++++|.+++...                                      +||+                  
T Consensus        83 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           83 YIVMEYC-EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEECC-TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEeCC-CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            9999999 989999887532                                      2222                  


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||++  +..||...+..+....+....       
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~i~~~~-------  232 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA--LMPPFTAFSQKELAGKIREGK-------  232 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTC-------
T ss_pred             hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHH--CCCCCcccCHHHHHHHHhhcc-------
Confidence                                      223357889999999999999999  568999888777766665542       


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      ....+..++.++.+++.+||+.+|.+|||+.+|++++..
T Consensus       233 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          233 FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            224466789999999999999999999999999987643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=2.6e-28  Score=198.53  Aligned_cols=182  Identities=20%  Similarity=0.393  Sum_probs=136.0

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..........++|++.+.||+|+||.||+|....   ++..||+|.+.     ..+.+|+.++..++|+||+++++++..
T Consensus        19 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           19 DEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKE---TGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             -----------CEEEEEECC----CEEEEEEETT---TCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             CchhhhhcchhhhhhheeeccCCCeEEEEEEECC---CCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            3334455667889999999999999999998865   68899999984     668899999999999999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhh-C-----------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNS-A-----------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~-~-----------------------------r~l~----------------------  123 (228)
                      .+..+++|||+ ++++|.+++.. .                             +||+                      
T Consensus        96 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  174 (314)
T 3com_A           96 NTDLWIVMEYC-GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ  174 (314)
T ss_dssp             TTEEEEEEECC-TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCEEEEEeecC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence            88899999999 98999998852 1                             2222                      


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||++  |..||...+.......+....     ......
T Consensus       175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~  247 (314)
T 3com_A          175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE--GKPPYADIHPMRAIFMIPTNP-----PPTFRK  247 (314)
T ss_dssp             CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSC-----CCCCSS
T ss_pred             hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhcCC-----CcccCC
Confidence                                  223356889999999999999999  678998877665544333221     112233


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            55678999999999999999999999999863

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=6.8e-28  Score=195.79  Aligned_cols=177  Identities=20%  Similarity=0.347  Sum_probs=138.1

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      .++|++.+.||+|+||.||+|....   ++..||+|.++          ..+.+|+.++.+++|+||+++++++...+..
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETT---TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcC---CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            3568999999999999999998765   68899999873          4578999999999999999999999988889


Q ss_pred             eEEEeeccccCCHHHHhhhC---------------------------------Cccc-----------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA---------------------------------DNLT-----------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~-----------------------  123 (228)
                      +++|||+ ++++|.+++...                                 +||+                       
T Consensus       108 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          108 NIVLELA-DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EEEEECC-CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EEEEecC-CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            9999999 999999988631                                 2222                       


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC--hHHHHHHHHHhhhCCCccccCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--NEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                           .....++.++||||||+++|||++  +..||.+..  .......+....    .  ...
T Consensus       187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~--~~~  258 (310)
T 2wqm_A          187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLCKKIEQCD----Y--PPL  258 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTC---CCHHHHHHHHHTTC----S--CCC
T ss_pred             cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHh--CCCCCcccchhHHHHHHHhhccc----C--CCC
Confidence                                 223457889999999999999999  567886543  223333333221    0  111


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+..++.++.+++.+||+.||.+|||+.++++.|+++.
T Consensus       259 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          259 PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            23568899999999999999999999999999999993

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=5.8e-29  Score=202.63  Aligned_cols=188  Identities=16%  Similarity=0.328  Sum_probs=143.3

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ...+.+.+..++|++.+.||+|+||.||++....   .++.||+|.+.       ..+.+|+.++..++|+||+++++++
T Consensus        19 ~~g~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (317)
T 2buj_A           19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLH---DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC   95 (317)
T ss_dssp             EEEEEEEETTEEEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             ecccEEEECCeEEEEEEEecCCCCeEEEEEEecC---CCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3346778889999999999999999999998765   78999999872       5578999999999999999999998


Q ss_pred             eC----CCCCeEEEeeccccCCHHHHhhhC---------------------------------Cccc-------------
Q psy796           94 TG----EQPPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT-------------  123 (228)
Q Consensus        94 ~~----~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~-------------  123 (228)
                      ..    ....+++|||+ ++|+|.+++...                                 +||+             
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~k  174 (317)
T 2buj_A           96 LRERGAKHEAWLLLPFF-KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV  174 (317)
T ss_dssp             EEEETTEEEEEEEEECC-TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred             EeccCCCceeEEEEEeC-CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEE
Confidence            63    33678999999 999999988651                                 2333             


Q ss_pred             ----------------------------------------cc---cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-
Q psy796          124 ----------------------------------------RD---RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-  159 (228)
Q Consensus       124 ----------------------------------------~~---~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-  159 (228)
                                                              ..   ...++.++||||||+++|||++  +..||..... 
T Consensus       175 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~  252 (317)
T 2buj_A          175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF--GEGPYDMVFQK  252 (317)
T ss_dssp             ECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH--SSCTTHHHHHT
T ss_pred             EEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHh--CCCChhhhhcc
Confidence                                                    00   1125789999999999999999  5688853111 


Q ss_pred             -HHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccC
Q psy796          160 -EQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYK  221 (228)
Q Consensus       160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~  221 (228)
                       ......+..       ....+.+..++.++.+++.+||+.+|.+|||+.+++++|+.+....
T Consensus       253 ~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          253 GDSVALAVQN-------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             TSCHHHHHHC-------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             cchhhHHhhc-------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence             111111111       1133445678999999999999999999999999999999994433

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=8.4e-29  Score=202.78  Aligned_cols=171  Identities=19%  Similarity=0.254  Sum_probs=135.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.+.        +.+.+|+.+++.++|+||+++++++...+..+++
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhceeeeEEecCCCEEEEEEEECC---CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            568999999999999999998875   78899999983        4578999999999999999999999998889999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||+ ++|+|.+++...                             +||+                              
T Consensus        84 ~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           84 LEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             EECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEcC-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            9999 999998887654                             3333                              


Q ss_pred             ----------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ----------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ----------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                      ..... ++.++||||||+++|||++  |..||...+.. .....+....      ........+
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~  234 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEYSDWKEKK------TYLNPWKKI  234 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHH--SSCSCSSSCTTSHHHHHHHTTC------TTSTTGGGS
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHh--CCCCCCCCchHHHHHHHHhccc------ccCCccccC
Confidence                            11222 3678999999999999999  67899776553 2222221110      022233567


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+|+.+||+.||.+|||+.+++++
T Consensus       235 ~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          235 DSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            8999999999999999999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=3.3e-28  Score=201.26  Aligned_cols=170  Identities=22%  Similarity=0.390  Sum_probs=138.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      +.|+..+.||+|+||.||+|....   ++..||||.+.          ..+.+|++++.+++|+||+++++++...+..+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  130 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW  130 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEcc---CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEE
Confidence            457888999999999999998765   78999999883          45789999999999999999999999988899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      +||||+ . |+|.+++...                              +||+                           
T Consensus       131 lv~e~~-~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~  208 (348)
T 1u5q_A          131 LVMEYC-L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN  208 (348)
T ss_dssp             EEEECC-S-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred             EEEecC-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence            999999 7 7887776421                              3333                           


Q ss_pred             -------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 -------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 -------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                   .   ....++.++||||||+++|||++  |..||.+.+.......+.....      ....+..+++
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  280 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHWSE  280 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSCC------CCCCCTTSCH
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHhcCC------CCCCCCCCCH
Confidence                         1   34678899999999999999999  6789988777665554443210      1223456889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+|||+.+++++
T Consensus       281 ~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          281 YFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhhC
Confidence            99999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=3.6e-28  Score=209.29  Aligned_cols=173  Identities=23%  Similarity=0.355  Sum_probs=143.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.|++.+.||+|+||.||++....   ++..||+|.+.         ..+.+|+.++++++||||+++++++......++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETT---TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            458899999999999999999865   78899999983         457899999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++|+|.+++...                             +||+                             
T Consensus        99 v~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A           99 VGELY-TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             EECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             EEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            99999 999998877543                             3333                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ...+.++.++|||||||++|+|++  |..||.+.+..+....+......    ...+.+..++.
T Consensus       178 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~  251 (486)
T 3mwu_A          178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS--GTPPFYGKNEYDILKRVETGKYA----FDLPQWRTISD  251 (486)
T ss_dssp             ----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----SCSGGGGGSCH
T ss_pred             CccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCCcccCCCCH
Confidence                            112346789999999999999999  67999998888877777654221    12223356789


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++++.+||+.+|.+|||+.+++++
T Consensus       252 ~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          252 DAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            99999999999999999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=4.9e-28  Score=203.24  Aligned_cols=173  Identities=16%  Similarity=0.272  Sum_probs=138.3

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeeeeee
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILGVCT   94 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g~~~   94 (228)
                      ..+..++|++.++||+|+||.||+++...   +++.||+|+++          ..+.+|..++.++ +||||+++++++.
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~  123 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ  123 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE
Confidence            45566789999999999999999999876   78999999985          2367899998876 8999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      +.+..++||||+ ++|+|.+++...                             |||+                      
T Consensus       124 ~~~~~~lV~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          124 TESRLFFVIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             CSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             ECCEEEEEEEcC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            999999999999 999999888653                             4444                      


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh---------HHHHHHHHHhhhC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN---------EQVIQNAEHMYYG  172 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~---------~~~~~~~~~~~~~  172 (228)
                                            +.+..++.++|||||||++|||++  |..||.....         ..+...+...   
T Consensus       203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~--G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---  277 (396)
T 4dc2_A          203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK---  277 (396)
T ss_dssp             CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSTTTTC------CCHHHHHHHHHHC---
T ss_pred             cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh--CCCCCcccccccccchhhHHHHHHHHhcc---
Confidence                                  334567899999999999999999  6789964321         1223333221   


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCH------HHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF------KQIYS  212 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~------~~v~~  212 (228)
                           ....|..++.++.+|+.+||+.||.+||++      .++++
T Consensus       278 -----~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          278 -----QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             -----CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             -----ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence                 345677899999999999999999999985      56654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=5.9e-28  Score=208.85  Aligned_cols=173  Identities=20%  Similarity=0.356  Sum_probs=140.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------------------HHHHHHHHHHhhCCCCCcceee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------------------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      +.|.+.+.||+|+||.||+|....   .+..||+|.++                    ..+.+|+.++++++||||++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKN---GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cceEEEeEecccCCeEEEEEEECC---CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            468899999999999999999875   67899999873                    3467899999999999999999


Q ss_pred             eeeeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------
Q psy796           91 GVCTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------  123 (228)
Q Consensus        91 g~~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------  123 (228)
                      +++.+....++||||| ++|+|.+++...                             +||+                  
T Consensus       113 ~~~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          113 DVFEDKKYFYLVTEFY-EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EEEECSSEEEEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEEEcCCEEEEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence            9999998999999999 999998877543                             3333                  


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++|||||||++|+|++  |..||.+.+..+....+......    
T Consensus       192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----  265 (504)
T 3q5i_A          192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLC--GYPPFGGQNDQDIIKKVEKGKYY----  265 (504)
T ss_dssp             CCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC----
T ss_pred             ECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHcCCCC----
Confidence                                       112346889999999999999999  67999998888887777654211    


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+.+..++.++++++.+||+.+|.+|||+.+++++
T Consensus       266 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            0111235788999999999999999999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=1.7e-27  Score=191.67  Aligned_cols=175  Identities=21%  Similarity=0.269  Sum_probs=137.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||+|...    .+..||+|.++         ..+.+|++++++++|+||+++++++...+..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcC----CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEE
Confidence            46889999999999999999873    67899999883         457899999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      +|||+ + ++|.+++...                              +||+                            
T Consensus        78 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (288)
T 1ob3_A           78 VFEHL-D-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (288)
T ss_dssp             EEECC-S-EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             EEEec-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence            99999 7 5888877542                              3333                            


Q ss_pred             ----------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----------
Q psy796          124 ----------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------  175 (228)
Q Consensus       124 ----------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  175 (228)
                                      . ....++.++||||||+++|||++  |..||.+.+..+....+.........           
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T 1ob3_A          156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN--GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK  233 (288)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence                            1 22357899999999999999999  67999888777665555443211100           


Q ss_pred             -cccC---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -QVFL---------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~~~~---------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       .+..         .....+++++.+++.+||+.||.+|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence             0000         0123578899999999999999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=1.8e-28  Score=200.75  Aligned_cols=186  Identities=27%  Similarity=0.459  Sum_probs=140.8

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEecc-CCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC--C
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG--E   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~--~   96 (228)
                      -+..++|++.+.||+|+||.||++.+... ...+..||+|.+.       ..+.+|++++.+++|+||+++++++..  .
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   98 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR   98 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence            36678899999999999999999986421 1167899999984       458899999999999999999998874  3


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      ...+++|||+ ++++|.+++...                              +||+                       
T Consensus        99 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A           99 QSLRLVMEYL-PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             CEEEEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             ceEEEEEeec-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence            4578999999 999999998652                              3333                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH-----------HHHHHH
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-----------IQNAEH  168 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~-----------~~~~~~  168 (228)
                                              ..+..++.++||||||++++||++  +..||........           ...+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPALSRLLE  255 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT--TTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh--CCCCCccccchhhhhcccccccccHHHHHH
Confidence                                    112235779999999999999999  4567654322110           011111


Q ss_pred             hhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          169 MYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ......   ..+.+..++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       256 ~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          256 LLEEGQ---RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             HHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             Hhhccc---CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111111   34457789999999999999999999999999999999883

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.96  E-value=1e-28  Score=201.74  Aligned_cols=185  Identities=22%  Similarity=0.295  Sum_probs=139.3

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ..++|++.+.||+|+||.||+|...    ++..||+|.+.       ..+.+|+.+++.++|+||+++++++...+..++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR----DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT----TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred             HHhccCccceeecCCCeeEEEEEEC----CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            4467888999999999999999864    67899999873       568899999999999999999999998889999


Q ss_pred             EEeeccccCCHHHHhhhC---------------------------------Cccc-------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA---------------------------------DNLT-------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~---------------------------------r~l~-------------------------  123 (228)
                      +|||+ ++|+|.+++...                                 +||+                         
T Consensus       113 v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          113 IYKYM-ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE  191 (321)
T ss_dssp             EEECC-TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred             EEEcC-CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            99999 999998887532                                 2333                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH---HHHHHHHhhhCCCcc---
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ---VIQNAEHMYYGGELQ---  176 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~---  176 (228)
                                           .....++.++||||||+++|||++  |..||......+   ...+...........   
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2qkw_B          192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC--ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV  269 (321)
T ss_dssp             SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHH--CCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred             ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHh--CCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence                                 123457889999999999999999  567876543321   111111111111111   


Q ss_pred             -ccC--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          177 -VFL--PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       177 -~~~--~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                       +..  ..+..++.++.+++.+||+.+|++|||+.+++++|+.+.+.
T Consensus       270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence             001  11223457899999999999999999999999999998443

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=8e-28  Score=194.97  Aligned_cols=173  Identities=20%  Similarity=0.314  Sum_probs=141.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      ++|.+.+.||+|+||.||++....   +++.||+|.++       ..+.+|+.++..++|+||+++++++...+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRL---TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            457889999999999999998865   68899999984       44789999999999999999999999988899999


Q ss_pred             eeccccCCHHHHhhhC-----------------------------Cccc-------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------------  123 (228)
                      ||+ ++++|.+++...                             +||+                               
T Consensus        86 e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  164 (304)
T 2jam_A           86 QLV-SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM  164 (304)
T ss_dssp             CCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred             EcC-CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence            999 999999887543                             2222                               


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    .....++.++||||||+++|||++  |..||...+.......+......    ...+.+..++.++
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~  238 (304)
T 2jam_A          165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC--GYPPFYEETESKLFEKIKEGYYE----FESPFWDDISESA  238 (304)
T ss_dssp             HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHCCCC----CCTTTTTTSCHHH
T ss_pred             ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHcCCCC----CCccccccCCHHH
Confidence                          223457789999999999999999  67999888877776666553211    1122345688999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+++.+||+.+|.+|||+.+++++
T Consensus       239 ~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          239 KDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             HHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcC
Confidence            999999999999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=6.9e-28  Score=196.68  Aligned_cols=184  Identities=16%  Similarity=0.252  Sum_probs=140.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC--
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ--   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~--   97 (228)
                      +....|.+.+.||+|+||.||+|....   .++.||+|.++        ..+.+|++++++++|+||+++++++...+  
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   82 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc
Confidence            345678999999999999999999875   68899999984        45779999999999999999999987665  


Q ss_pred             CCeEEEeeccccCCHHHHhhhC--------------------------------Cccc----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~----------------------  123 (228)
                      ..+++|||+ ++++|.+++...                                +||+                      
T Consensus        83 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           83 HKVLIMEFC-PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             CEEEEEECC-TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             eEEEEEeCC-CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            668999999 999999988643                                3333                      


Q ss_pred             -------------------------c--------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh----HHHHHHH
Q psy796          124 -------------------------R--------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN----EQVIQNA  166 (228)
Q Consensus       124 -------------------------~--------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~----~~~~~~~  166 (228)
                                               .        ....++.++||||||+++|||++  |..||.....    ......+
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~  239 (319)
T 4euu_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRRNKEVMYKI  239 (319)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH--SSCSEECTTCGGGCHHHHHHH
T ss_pred             CceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCccchhHHHHHHH
Confidence                                     0        14567889999999999999999  6688875433    2333444


Q ss_pred             HHhhhCCCcc-------------ccCCC----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          167 EHMYYGGELQ-------------VFLPK----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       167 ~~~~~~~~~~-------------~~~~~----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..........             ...+.    +..++..+.+++.+||+.||++|||+.+++++.+..
T Consensus       240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            3332111000             01111    122356788999999999999999999999999876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=6.8e-28  Score=197.37  Aligned_cols=191  Identities=28%  Similarity=0.528  Sum_probs=140.7

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEecc-CCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI-ELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~-~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ..+...+..++|++.+.||+|+||.||++.+... ...+..||+|.+.       ..+.+|+.++++++|+||+++++++
T Consensus        32 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  111 (326)
T 2w1i_A           32 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC  111 (326)
T ss_dssp             -----CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccCccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            3456677888899999999999999999986421 1267899999984       4688999999999999999999998


Q ss_pred             eCCC--CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------
Q psy796           94 TGEQ--PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------  123 (228)
Q Consensus        94 ~~~~--~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------  123 (228)
                      ...+  ..+++|||+ ++++|.+++...                              +||+                  
T Consensus       112 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg  190 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYL-PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  190 (326)
T ss_dssp             CC----CCEEEECCC-TTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             EecCCCceEEEEECC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCc
Confidence            6643  689999999 999999998654                              2332                  


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh------------HHH
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN------------EQV  162 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~------------~~~  162 (228)
                                                   .....++.++||||||++++||++  +..|+.....            ...
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t--g~~~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T 2w1i_A          191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDKQGQMI  268 (326)
T ss_dssp             TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHH--TTCGGGSHHHHHHHHHCTTCCTHHH
T ss_pred             chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHh--cCCCCCCCHHHHHHhhccccchhhh
Confidence                                         111235778999999999999999  4466543210            111


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ...+........   ..+.+..++.++.+++.+||+.+|.+|||+.++++.|+.+.
T Consensus       269 ~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          269 VFHLIELLKNNG---RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCC---CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111111111111   34456789999999999999999999999999999999983

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.6e-28  Score=196.54  Aligned_cols=169  Identities=18%  Similarity=0.295  Sum_probs=132.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.+.          ..+.+|+.++.+++|+||+++++++...+..+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIH---TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY   87 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEcc---CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence            468899999999999999998765   78899999983          44788999999999999999999999988899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ ++++|.+++...                              +||+                           
T Consensus        88 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           88 LVLEMC-HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EEEECC-TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEecC-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            999999 999999988653                              2222                           


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++||||||++++||++  +..||......+....+..        .....|..++
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~  236 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI--GRPPFDTDTVKNTLNKVVL--------ADYEMPSFLS  236 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHH--SSCSSCCCSCC-----CCS--------SCCCCCTTSC
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHhh--------cccCCccccC
Confidence                             223346789999999999999999  6688877655443332211        1234466789


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+++.+||+.+|.+|||+.+++++
T Consensus       237 ~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          237 IEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            999999999999999999999999873

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.96  E-value=9.7e-28  Score=195.38  Aligned_cols=180  Identities=20%  Similarity=0.299  Sum_probs=139.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .+--.++|++.+.||+|+||.||+|...    +++.||+|.++         ..+.+|++++++++|+||+++++++.+.
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS----QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE   91 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEET----TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEEC----CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence            3344567999999999999999999874    67899999884         4578999999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ + |+|.+++...                              +||+                       
T Consensus        92 ~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           92 RCLTLVFEFM-E-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             SCEEEEEECC-S-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             CEEEEEEcCC-C-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence            8999999999 7 5887776543                              3333                       


Q ss_pred             ---------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc----
Q psy796          124 ---------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV----  177 (228)
Q Consensus       124 ---------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----  177 (228)
                                           . ....++.++||||||+++|||++  |..||.+.+..+....+...........    
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT--GKPLFPGVTDDDQLPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred             CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence                                 1 12457899999999999999999  6699988777665555544322111000    


Q ss_pred             ------------cCC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 ------------FLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ------------~~~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                  ...      ....++.++.+|+.+||+.||.+|||+.++++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                        000      023467899999999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.96  E-value=1.5e-27  Score=194.84  Aligned_cols=173  Identities=18%  Similarity=0.235  Sum_probs=141.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|++.+.||+|+||.||++....   ++..||+|.++             ..+.+|+.++.+++|+||+++++++...+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccEEEeeEeeecCCEEEEEEEECC---CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            458899999999999999999865   68899999883             45889999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++++|.+++...                             +||+                         
T Consensus        89 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           89 DVVLILELV-SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             EEEEEECCC-CSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EEEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            899999999 999999998654                             2222                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||+++|||++  |..||.+.+..+....+.......    ....
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~----~~~~  241 (321)
T 2a2a_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS--GASPFLGDTKQETLANITSVSYDF----DEEF  241 (321)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHTTCCCC----CHHH
T ss_pred             ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhccccc----Chhh
Confidence                                  223457889999999999999999  678998887777766655432100    0011


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       242 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            25678999999999999999999999999873

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=9.3e-28  Score=191.93  Aligned_cols=173  Identities=18%  Similarity=0.268  Sum_probs=141.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.|++.+.||+|+||.||+|....   .+..||+|.+.       ..+.+|++++.+++|+||+++++++......+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCC---CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            358889999999999999998865   67889999884       56889999999999999999999999988899999


Q ss_pred             eeccccCCHHHHhhhC-----------------------------Cccc-------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------------  123 (228)
                      ||+ ++++|.+++...                             +||+                               
T Consensus        86 e~~-~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~  164 (277)
T 3f3z_A           86 ELC-TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM  164 (277)
T ss_dssp             ECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred             ecc-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence            999 999998887543                             2222                               


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC----CCC
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP----SLC  185 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  185 (228)
                                    ...+.++.++||||||++++||++  +..||...+..+....+....        ...+    ..+
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  234 (277)
T 3f3z_A          165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLC--GYPPFSAPTDSEVMLKIREGT--------FTFPEKDWLNV  234 (277)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCHHHHTTS
T ss_pred             hhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhCC--------CCCCchhhhcC
Confidence                          111236889999999999999999  679999888777766665432        2222    367


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                      +.++.+++.+||+.+|.+|||+.++++  .+++.
T Consensus       235 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            899999999999999999999999996  34444

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=3.5e-28  Score=209.25  Aligned_cols=174  Identities=22%  Similarity=0.330  Sum_probs=144.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~   99 (228)
                      .+.|++.+.||+|+||.||++....   .+..||||++.          ..+.+|+.++++++||||+++++++......
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECC---CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            4568899999999999999998865   78899999872          4588999999999999999999999998899


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      +++|||+ .+|+|.+++...                             +||+                           
T Consensus       102 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          102 YLVGEVY-TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EEEECCC-CSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            9999999 999999887544                             3333                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        ...+.++.++|||||||++|+|++  |..||.+.+..+....+......    ...+.+..+
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~  254 (484)
T 3nyv_A          181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS--GCPPFNGANEYDILKKVEKGKYT----FELPQWKKV  254 (484)
T ss_dssp             CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC----CCSGGGGGS
T ss_pred             cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHcCCCC----CCCcccccC
Confidence                              112357889999999999999999  67999998888877777654211    122233568


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++++++.+||+.+|.+|||+.++++|
T Consensus       255 s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          255 SESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            8999999999999999999999999973

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=3.3e-29  Score=206.29  Aligned_cols=168  Identities=21%  Similarity=0.308  Sum_probs=135.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .+|.+.+.||+|+||.||+|....   .++.||+|.+.          ..+.+|+.+++.++||||+++++++...+..+
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYK---TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            468899999999999999999865   78999999884          35789999999999999999999999988899


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ . |+|.+++...                             +||+                            
T Consensus        86 lv~E~~-~-g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~  163 (336)
T 3h4j_B           86 MVIEYA-G-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF  163 (336)
T ss_dssp             EEECCC-C-EEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred             EEEECC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence            999998 5 7888877543                             3333                            


Q ss_pred             ---------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ---------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ---------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                     ..+..+ +.++||||||+++|||++  |..||.+.........+..        .....|..++.
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~--g~~Pf~~~~~~~~~~~i~~--------~~~~~p~~~s~  233 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLV--GRLPFDDEFIPNLFKKVNS--------CVYVMPDFLSP  233 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHH--SSCSSBCSSSTTCBCCCCS--------SCCCCCTTSCH
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHh--CCCCCCCccHHHHHHHHHc--------CCCCCcccCCH
Confidence                           112222 678999999999999999  6789977554433221111        12345677899


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.||.+|||+.+++++
T Consensus       234 ~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          234 GAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            99999999999999999999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.95  E-value=5.6e-28  Score=197.27  Aligned_cols=177  Identities=19%  Similarity=0.280  Sum_probs=126.4

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .++|++.+.||+|+||.||+|....   ++..||+|.++        ..+.+|+.++++++|+||+++++++...+..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   80 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT---TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL   80 (317)
T ss_dssp             ---------------CEEEEEECSS---SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC---CCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence            3568899999999999999998765   68899999884        568899999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------------Cccc-----------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------------DNLT-----------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------------r~l~-----------------------  123 (228)
                      +|||+ + |+|.+++...                                   +||+                       
T Consensus        81 v~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           81 VFEFM-D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             EEECC-C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EEEec-C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            99999 7 7998887532                                   3333                       


Q ss_pred             ---------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------
Q psy796          124 ---------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------  175 (228)
Q Consensus       124 ---------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------  175 (228)
                                           . ....++.++||||||+++|||++  |..||.+.+..+....+.........      
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT--GKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV  236 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence                                 1 12357899999999999999999  67999988877666655443211000      


Q ss_pred             ------ccc--------------CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ------QVF--------------LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ------~~~--------------~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ...              ...+..++.++.+++.+||+.||.+|||+.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence                  000              00123577899999999999999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=194.19  Aligned_cols=177  Identities=23%  Similarity=0.303  Sum_probs=139.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.+.         ..+.+|+.++.+++|+||+++++++...+..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRD---TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL   79 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence            468899999999999999999865   68899999872         457789999999999999999999999888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++++|.+++...                             +||+                             
T Consensus        80 v~e~~-~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           80 VFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             EEECC-SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEEeC-CCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence            99999 988888876543                             2333                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------Cc-
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------EL-  175 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~-  175 (228)
                                      .....++.++||||||++++||++  |..||.+.+..+....+.......           .. 
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS--GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence                            123567899999999999999999  679998887776555444321110           00 


Q ss_pred             -cccCCC----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -QVFLPK----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -~~~~~~----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....+.          ...++.++.+++.+||+.||.+|||+.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence             000111          13578889999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.95  E-value=5.1e-28  Score=195.15  Aligned_cols=171  Identities=17%  Similarity=0.202  Sum_probs=142.0

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ..++|.+.+.||+|+||.||++....   .+..||+|.+.          ..+.+|+.+++.++|+||+++++++...+.
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   89 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF   89 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECC---CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCE
Confidence            34568889999999999999999865   67899999873          447889999999999999999999998888


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .+++|||+ ++++|.+++...                             +||+                          
T Consensus        90 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           90 VFVVLELC-RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EEEEEECC-TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            99999999 999999887543                             2332                          


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        .....++.++||||||++++||++  |..||......+....+...        ....+..+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~  238 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV--GKPPFETSCLKETYLRIKKN--------EYSIPKHI  238 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTT--------CCCCCTTS
T ss_pred             ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhhc--------cCCCcccc
Confidence                              123346789999999999999999  67999887776665555432        33456778


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|.+|||+.+++++
T Consensus       239 ~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          239 NPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            9999999999999999999999999985

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.95  E-value=4.7e-28  Score=195.41  Aligned_cols=181  Identities=12%  Similarity=0.105  Sum_probs=143.3

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCe
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~  100 (228)
                      .+-.++|++.+.||+|+||.||+|....   ++..||+|.+.     ..+.+|+.++..+ +|+|++++++++......+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence            4556779999999999999999998755   78999999884     5588999999999 7999999999998888899


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+  +++|.+++...                              +||+                           
T Consensus        83 lv~e~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           83 LVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             EEEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEEec--CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            999997  69999998743                              2222                           


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh---HHHHHHHHHhhh
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN---EQVIQNAEHMYY  171 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~---~~~~~~~~~~~~  171 (228)
                                                   ..+..++.++||||||+++|||++  |..||.+.+.   ......+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~  238 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR--GSLPWQGLKAATNKQKYERIGEKKQ  238 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHc--CCCCcchhhccccHHHHHHHHhhcc
Confidence                                         112346788999999999999999  6789987543   333333333221


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ...   .......+++++.+++.+||+.+|.+|||+.+|++.|+++
T Consensus       239 ~~~---~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          239 STP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HSC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             Ccc---HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            110   1112346889999999999999999999999999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=3.2e-28  Score=206.84  Aligned_cols=179  Identities=16%  Similarity=0.222  Sum_probs=146.4

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+..++|++.++||+|+||.||++....   .++.||+|+++.          .+.+|+.++..++|+||+++++++.+
T Consensus        69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           69 MRLHREDFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             ccCChhheEEEEEEEeCCCEEEEEEEEcC---CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            44567889999999999999999999875   689999999842          27889999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                      .+..++||||+ ++|+|.+++...                              |||+                      
T Consensus       146 ~~~~~lV~Ey~-~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          146 DNNLYLVMDYY-VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  224 (437)
T ss_dssp             SSEEEEEECCC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecC-CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence            99999999999 999999999752                              4444                      


Q ss_pred             -----------------------cc-----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 -----------------------RD-----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 -----------------------~~-----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                             +.     ...++.++|||||||++|||++  |..||.+.+..+....+........ 
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~~~~~~-  301 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY--GETPFYAESLVETYGKIMNHKERFQ-  301 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTHHHHCC-
T ss_pred             cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh--CCCCCCCCChhHHHHhhhhcccccc-
Confidence                                   11     3457889999999999999999  6799999888887777654322110 


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTM--RPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~--Rps~~~v~~~  213 (228)
                        .......+++++++|+.+||+.+|++  ||+++++++|
T Consensus       302 --~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          302 --FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             --CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             --CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence              11122458999999999999888888  9999999863

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.95  E-value=1.5e-28  Score=202.81  Aligned_cols=173  Identities=20%  Similarity=0.287  Sum_probs=136.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeec
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~  106 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|+++   ....+|++++.++ +||||+++++++.+....+++|||+
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   98 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM   98 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence            458889999999999999999875   78999999995   3457899998887 7999999999999998999999999


Q ss_pred             cccCCHHHHhhhC-----------------------------Cccc----------------------------------
Q psy796          107 AQLGDLVQHLNSA-----------------------------DNLT----------------------------------  123 (228)
Q Consensus       107 ~~~g~L~~~l~~~-----------------------------r~l~----------------------------------  123 (228)
                       ++|+|.+++...                             +||+                                  
T Consensus        99 -~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~  177 (342)
T 2qr7_A           99 -KGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL  177 (342)
T ss_dssp             -CSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB
T ss_pred             -CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce
Confidence             999999988654                             3333                                  


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC---ChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL---TNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                    .....++.++|||||||++|||++  |..||.+.   ...++...+....    .......+..++
T Consensus       178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~s  251 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT--GYTPFANGPDDTPEEILARIGSGK----FSLSGGYWNSVS  251 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSCSSCSSTTSCHHHHHHHHHHCC----CCCCSTTTTTSC
T ss_pred             eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc--CCCCCCCCCcCCHHHHHHHHccCC----cccCccccccCC
Confidence                          001125678999999999999999  66888763   3344555554432    111112345689


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .++.+|+.+||+.||.+|||+.++++|
T Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          252 DTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            999999999999999999999999874

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.95  E-value=1.2e-27  Score=196.34  Aligned_cols=179  Identities=22%  Similarity=0.318  Sum_probs=138.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ...++|++.+.||+|+||.||++....   .+..||+|.++         ..+.+|+.++++++|+||+++++++...+.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTV---TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECC---CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence            344579999999999999999998765   78999999984         346789999999999999999999999989


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .+++|||+ + |+|.+++...                             +||+                          
T Consensus       108 ~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          108 LHLIFEYA-E-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EEEEEECC-S-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EEEEEecC-C-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            99999999 7 6999888654                             3333                          


Q ss_pred             -----------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc---
Q psy796          124 -----------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ---  176 (228)
Q Consensus       124 -----------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---  176 (228)
                                             . ....++.++|||||||+++||++  +..||.+.+..+....+..........   
T Consensus       186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM--KTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHH--CCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence                                   1 12347899999999999999999  679998887776665554432110000   


Q ss_pred             ---------ccCCC----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ---------VFLPK----------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ---------~~~~~----------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               ...+.          +..++.++.+|+.+||+.||.+|||+.++++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence                     00000          11167899999999999999999999999863

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.95  E-value=8.7e-28  Score=199.20  Aligned_cols=181  Identities=18%  Similarity=0.253  Sum_probs=141.7

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      ..++..++|++.+.||+|+||.||++....   .+..||+|.++        ..+.+|+.++..++|+||+++++++...
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD  103 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECC---CCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC
Confidence            345667889999999999999999999865   68899999883        4578999999999999999999999988


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ ++++|.+++...                              +||+                       
T Consensus       104 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          104 GEISICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             TEEEEEECCC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CEEEEEEECC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            8899999999 999999987643                              3333                       


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH----------------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH----------------  168 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~----------------  168 (228)
                                         ..+..++.++||||||+++|||++  |..||...+..+....+..                
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (360)
T 3eqc_A          183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV--GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP  260 (360)
T ss_dssp             HHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHH--TSCCSSCCCHHHHHHHHC-----------------
T ss_pred             ccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence                               334467889999999999999999  6689987665543222110                


Q ss_pred             ----------------------hhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          169 ----------------------MYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       169 ----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                            ...... . ....+..++.++.+|+.+||+.||.+|||+.++++|
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          261 GRPLNKFGMDSRPPMAIFELLDYIVNEP-P-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             -------------CCCHHHHHHHHHHSC-C-CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCcccccccCCCCcccchhhhhHHhccC-C-CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                                  000000 0 111233478899999999999999999999999973

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.95  E-value=1.9e-27  Score=190.55  Aligned_cols=177  Identities=19%  Similarity=0.276  Sum_probs=143.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.++             ..+.+|+.++.+++|+||+++++++...+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKG---TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhHHhhcccCceEEEEEEEcC---CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            358899999999999999999875   68899999873             45889999999999999999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..+++|||+ ++++|.+++...                             +||+                         
T Consensus        82 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           82 DVVLILELV-SGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             eEEEEEeec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            899999999 999999988643                             2222                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            .....++.++||||||++++||++  +..||.+.+..+....+.......    ....
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~----~~~~  234 (283)
T 3bhy_A          161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS--GASPFLGETKQETLTNISAVNYDF----DEEY  234 (283)
T ss_dssp             ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTTCCCC----CHHH
T ss_pred             eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH--CCCCCCCcchHHHHHHhHhcccCC----cchh
Confidence                                  223467889999999999999999  668998888777666554332110    0111


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                      +..++.++.+++.+||+.+|.+|||+.++++  .++.+
T Consensus       235 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence            3567899999999999999999999999997  46665

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=6e-28  Score=197.78  Aligned_cols=188  Identities=15%  Similarity=0.229  Sum_probs=139.4

Q ss_pred             CCccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCC-CCC
Q psy796           14 MGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQ-DPN   85 (228)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~-h~n   85 (228)
                      +.....-...+.+++...+|++.+.||+|+||.||++....   .++.||+|.+.       ..+.+|+.++.++. |+|
T Consensus        11 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~   87 (337)
T 3ll6_A           11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVG---SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN   87 (337)
T ss_dssp             ----CCSSTTCEEEETTEEEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             ccchHHHhhcceeeccCceEEEEEEEccCCceEEEEEEECC---CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCC
Confidence            33333334457888999999999999999999999999865   78899999872       55789999999995 999


Q ss_pred             cceeeeeeeC--------CCCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc
Q psy796           86 LVSILGVCTG--------EQPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT  123 (228)
Q Consensus        86 iv~~~g~~~~--------~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~  123 (228)
                      |+++++++..        ....+++|||+ . |+|.+++...                                  +||+
T Consensus        88 iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dik  165 (337)
T 3ll6_A           88 IVQFCSAASIGKEESDTGQAEFLLLTELC-K-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK  165 (337)
T ss_dssp             BCCEEEEEEECTTTSTTSSEEEEEEEECC-S-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCC
T ss_pred             hhhccccccccccccccCCceEEEEEEec-C-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCC
Confidence            9999999842        23468999998 6 7888877541                                  2222


Q ss_pred             --------------------------------------------------------c---ccCCCCCccchHHHHHHHHH
Q psy796          124 --------------------------------------------------------R---DRDRYTCQSNVWSFAVTLWE  144 (228)
Q Consensus       124 --------------------------------------------------------~---~~~~~~~~~Dv~s~Gv~l~e  144 (228)
                                                                              .   ....++.++||||||+++||
T Consensus       166 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~e  245 (337)
T 3ll6_A          166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL  245 (337)
T ss_dssp             GGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHH
T ss_pred             cccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHH
Confidence                                                                    0   23346779999999999999


Q ss_pred             HHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          145 ILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       145 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      |++  +..||............          ...+.+..++.++.+++.+||+.+|.+|||+.+++++|+.+.
T Consensus       246 l~~--g~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          246 LCF--RQHPFEDGAKLRIVNGK----------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             HHH--SSCCC----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHh--CCCCCcchhHHHhhcCc----------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999  66888764443322111          023345667788999999999999999999999999999993

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=4.1e-28  Score=197.39  Aligned_cols=180  Identities=19%  Similarity=0.216  Sum_probs=140.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .-.++|++.+.||+|+||.||++....   .++.||+|.++          ..+.+|+.++.+++|+||+++++++....
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   85 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECC---CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence            345679999999999999999999765   78999999984          34789999999999999999999987765


Q ss_pred             CC----eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           98 PP----WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        98 ~~----~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      ..    +++|||+ ++++|.+++...                             +||+                     
T Consensus        86 ~~~~~~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           86 PAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             TTEEEEEEEEECC-CEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             CCCcccEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            44    9999999 999999988643                             3333                     


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                ..+..++.++||||||+++|||++  |..||.+.+.............    .+
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~----~~  238 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT--GEPPFTGDSPVSVAYQHVREDP----IP  238 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHCCC----CC
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhcCCC----CC
Confidence                                      223357889999999999999999  6799988877665544433210    00


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHH-HHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQ-IYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~-v~~~l~~~  217 (228)
                      ....+..++.++.+++.+||+.||.+||++.+ +...+.+.
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            11123568899999999999999999997555 55566665

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=2.3e-27  Score=191.20  Aligned_cols=177  Identities=19%  Similarity=0.262  Sum_probs=135.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||+|....   +++.||+|.++         ..+.+|+.++++++|+||+++++++.+.+..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   78 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECC---CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEE
Confidence            468999999999999999999875   68899999984         557899999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhh-C-----------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNS-A-----------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~-~-----------------------------r~l~----------------------------  123 (228)
                      +|||+ + |++.+++.. .                             +||+                            
T Consensus        79 v~e~~-~-~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  156 (292)
T 3o0g_A           79 VFEFC-D-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EEECC-S-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred             EEecC-C-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence            99999 7 466555433 1                             3333                            


Q ss_pred             ----------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc----------
Q psy796          124 ----------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ----------  176 (228)
Q Consensus       124 ----------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------  176 (228)
                                      . ....++.++||||||++++||++++ .++|.+.+..+....+..........          
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~-~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG-RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS-CCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcC-CCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence                            1 1223789999999999999999963 45577766666666554432211000          


Q ss_pred             -----------ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 -----------VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 -----------~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                 ........++.++.+++.+||+.||++|||+.++++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                       0001123478899999999999999999999999874

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=4.3e-28  Score=204.63  Aligned_cols=178  Identities=17%  Similarity=0.194  Sum_probs=144.1

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH----------HHHHHHHHHhhCCCCCcceeeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG----------DSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~----------~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ...+..++|++.++||+|+||.||+++...   +++.||+|+++.          .+.+|..++..++|+||+++++++.
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~---~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            345667889999999999999999999875   789999999842          2678999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      +.+..++||||+ ++|+|.+++.+.                              |||+                     
T Consensus       132 ~~~~~~lVmE~~-~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~  210 (412)
T 2vd5_A          132 DENYLYLVMEYY-VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL  210 (412)
T ss_dssp             CSSEEEEEECCC-CSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eCCEEEEEEcCC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence            999999999999 999999998652                              3444                     


Q ss_pred             ------------------------cc-------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 ------------------------RD-------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 ------------------------~~-------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                              +.       ...++.++|||||||++|||++  |..||.+.+..+....+......
T Consensus       211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt--G~~Pf~~~~~~~~~~~i~~~~~~  288 (412)
T 2vd5_A          211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY--GQTPFYADSTAETYGKIVHYKEH  288 (412)
T ss_dssp             ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh--CCCCCCCCCHHHHHHHHHhcccC
Confidence                                    11       2457899999999999999999  67999998888777776653221


Q ss_pred             CCccccCC-CCCCCcHHHHHHHHHhhccCCCCC---CCHHHHHHH
Q psy796          173 GELQVFLP-KPSLCPRDIYDLMCDCWKRDQTMR---PTFKQIYSF  213 (228)
Q Consensus       173 ~~~~~~~~-~~~~~~~~l~~li~~c~~~~p~~R---ps~~~v~~~  213 (228)
                      .    ..+ .+..++.++++++.+||+ +|.+|   |+++++++|
T Consensus       289 ~----~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          289 L----SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             C----CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             c----CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            1    112 235789999999999999 89988   589988763

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=5e-28  Score=195.57  Aligned_cols=184  Identities=19%  Similarity=0.270  Sum_probs=128.5

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+.+..++|++.+.||+|+||.||++....   ++..||+|.+.        ..+.+|+.++.+++|+||+++++++..
T Consensus         8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   84 (303)
T 2vwi_A            8 LPWSINRDDYELQEVIGSGATAVVQAAYCAP---KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV   84 (303)
T ss_dssp             -----CCCCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEES
T ss_pred             cccccchhhhhhhheeccccceEEEEEEECC---CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence            4578889999999999999999999998765   67899999884        446789999999999999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhh--------C-----------------------------Cccc---------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNS--------A-----------------------------DNLT---------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~--------~-----------------------------r~l~---------------  123 (228)
                      .+..+++|||+ ++++|.+++..        .                             +||+               
T Consensus        85 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  163 (303)
T 2vwi_A           85 KDELWLVMKLL-SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA  163 (303)
T ss_dssp             SSCEEEEEECC-TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred             cCCcEEEehhc-cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEE
Confidence            88999999999 99999998863        1                             2222               


Q ss_pred             ----------------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q psy796          124 ----------------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEH  168 (228)
Q Consensus       124 ----------------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~  168 (228)
                                                        . ....++.++||||||+++|||++  |..||...+..........
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~  241 (303)
T 2vwi_A          164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT--GAAPYHKYPPMKVLMLTLQ  241 (303)
T ss_dssp             CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH--SSCTTTTSCGGGHHHHHHT
T ss_pred             eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh--CCCCCccCchhhHHHHHhc
Confidence                                              0 01347889999999999999999  6789988776554433322


Q ss_pred             hhhCCCcc--ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          169 MYYGGELQ--VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       169 ~~~~~~~~--~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ........  ........++.++.+++.+||+.||.+|||+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            11110000  0111235678999999999999999999999999873

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=191.73  Aligned_cols=179  Identities=18%  Similarity=0.205  Sum_probs=139.1

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ...+.+..+++....+||+|+||.||+|....   ++..||+|.+.       ..+.+|+.++..++|+||+++++++..
T Consensus        14 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   90 (295)
T 2clq_A           14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLS---NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE   90 (295)
T ss_dssp             CCCEEECBCTTSSBCEEEECSSSEEEEEEETT---TCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             cccccccccCCCCcEEEeecCcEEEEEEEECC---CCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe
Confidence            34555666666667799999999999999865   67899999873       558899999999999999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC--------------------------------Cccc--------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT--------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~--------------------  123 (228)
                      .+..+++|||+ ++++|.+++...                                +||+                    
T Consensus        91 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~  169 (295)
T 2clq_A           91 NGFIKIFMEQV-PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT  169 (295)
T ss_dssp             TTEEEEEEECC-SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred             CCcEEEEEEeC-CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccc
Confidence            88899999999 999999988643                                2222                    


Q ss_pred             -------------------------ccc--CCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH-HHHHHHhhhCCCc
Q psy796          124 -------------------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGEL  175 (228)
Q Consensus       124 -------------------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~  175 (228)
                                               ...  ..++.++||||||+++|||++  |..||........ .......  .   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~--~---  242 (295)
T 2clq_A          170 SKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT--GKPPFYELGEPQAAMFKVGMF--K---  242 (295)
T ss_dssp             CEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHH--TSCTTGGGSSHHHHHHHHHHH--C---
T ss_pred             ccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHH--CCCCccCCCchhHHHHhhccc--c---
Confidence                                     001  126789999999999999999  6688876543322 1111111  1   


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       .....+..++.++.+++.+||+.+|++|||+.+++++
T Consensus       243 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          243 -VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             -ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             0233467789999999999999999999999999863

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=2.9e-28  Score=197.23  Aligned_cols=171  Identities=20%  Similarity=0.300  Sum_probs=129.4

Q ss_pred             ceee-eeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHHHHH-hhCCCCCcceeeeeeeC----CCCCeEEEe
Q psy796           33 LRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREIRFL-SSLQDPNLVSILGVCTG----EQPPWLVME  104 (228)
Q Consensus        33 ~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~~~l-~~l~h~niv~~~g~~~~----~~~~~lv~e  104 (228)
                      |.+. +.||+|+||.||++....   ++..||+|.++  ..+.+|+.++ +..+|+||+++++++..    ....+++||
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             hhhcCcccccCCCeEEEEEEEcC---CCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            5555 789999999999998865   78899999995  6688899887 56699999999999876    556899999


Q ss_pred             eccccCCHHHHhhhC-------------------------------Cccc-------------------------cccCC
Q psy796          105 YPAQLGDLVQHLNSA-------------------------------DNLT-------------------------RDRDR  128 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------~~~~~  128 (228)
                      |+ ++|+|.+++...                               +||+                         .....
T Consensus        96 ~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (299)
T 3m2w_A           96 CL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK  174 (299)
T ss_dssp             CC-CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCG
T ss_pred             ec-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccccc
Confidence            99 999999998653                               3333                         33456


Q ss_pred             CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC----CCCcHHHHHHHHHhhccCCCCC
Q psy796          129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP----SLCPRDIYDLMCDCWKRDQTMR  204 (228)
Q Consensus       129 ~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~c~~~~p~~R  204 (228)
                      ++.++||||||+++|||++  |..||.+.+.......+.......    ....+    ..++.++.+++.+||+.+|.+|
T Consensus       175 ~~~~~DiwslG~il~el~t--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  248 (299)
T 3m2w_A          175 YDKSCDMWSLGVIMYILLC--GYPPFYSNHGLAISPGMKTRIRMG----QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  248 (299)
T ss_dssp             GGGHHHHHHHHHHHHHHHH--SSCSCCC-------CCSCCSSCTT----CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCchhhHHHHHHHHHHHHH--CCCCCCCCcchhhhHHHHHHHhhc----cccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence            7899999999999999999  678987655443221111111000    11112    5688999999999999999999


Q ss_pred             CCHHHHHHH
Q psy796          205 PTFKQIYSF  213 (228)
Q Consensus       205 ps~~~v~~~  213 (228)
                      ||+.+++++
T Consensus       249 ps~~e~l~h  257 (299)
T 3m2w_A          249 MTITEFMNH  257 (299)
T ss_dssp             CCHHHHHTS
T ss_pred             CCHHHHhcC
Confidence            999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=193.54  Aligned_cols=177  Identities=16%  Similarity=0.304  Sum_probs=139.9

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC-CCCCcceeeeeeeC--
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL-QDPNLVSILGVCTG--   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l-~h~niv~~~g~~~~--   95 (228)
                      ......+.|++.+.||+|+||.||+|....   .+..||+|.+.      ..+.+|+.++.++ +|+||+++++++..  
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN   94 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECC---CCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence            344466789999999999999999999865   78899999983      6688999999998 79999999999976  


Q ss_pred             ----CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------
Q psy796           96 ----EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------  123 (228)
Q Consensus        96 ----~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------  123 (228)
                          .+..+++|||+ ++|+|.+++...                               +||+                 
T Consensus        95 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFC-GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             --CCCCEEEEEEECC-TTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred             CccccceEEEEEEcC-CCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeC
Confidence                34679999999 989999998653                               2222                 


Q ss_pred             ---------------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 ---------------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 ---------------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                 .     ....++.++||||||+++|||++  |..||.+.+.......+.....
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~  251 (326)
T 2x7f_A          174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE--GAPPLCDMHPMRALFLIPRNPA  251 (326)
T ss_dssp             TTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSCC
T ss_pred             cCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHhhcCcc
Confidence                                       1     13457889999999999999999  6689988776655444432210


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ....+..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       252 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          252 ------PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             ------CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ------ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                  112245688999999999999999999999999873

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.95  E-value=9.8e-28  Score=194.50  Aligned_cols=176  Identities=21%  Similarity=0.305  Sum_probs=132.7

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      .++.||+|+||.||+|..     .+..||+|.+.           ..+.+|+.++.+++|+||+++++++...+..+++|
T Consensus        35 ~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYV-----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TCCEEEECSSEEEEEEES-----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             cCCccccCCCeEEEEEEE-----CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence            348899999999999986     67899999873           45789999999999999999999999888999999


Q ss_pred             eeccccCCHHHHhhhC--------------------------------Cccc----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA--------------------------------DNLT----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~--------------------------------r~l~----------------------------  123 (228)
                      ||+ ++|+|.+++...                                +||+                            
T Consensus       110 e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          110 VYM-PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             ECC-TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred             Eec-CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence            999 999999988632                                2322                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------ccc-C
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------QVF-L  179 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------~~~-~  179 (228)
                                       ...+.++.++||||||+++|||++  |..||...........+.........      ... .
T Consensus       189 ~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (307)
T 2nru_A          189 TVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT--GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN  266 (307)
T ss_dssp             CEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHH--CCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred             cccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHH--CCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc
Confidence                             001135789999999999999999  66888765443222222111111100      001 1


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ..+..+++.+.+++.+||+.+|.+|||+.+|+++|+++.
T Consensus       267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            122335678999999999999999999999999999884

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=2.5e-27  Score=191.21  Aligned_cols=173  Identities=18%  Similarity=0.248  Sum_probs=140.3

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------------HHHHHHHHHHhhCC-CCCcceeeee
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------------GDSLREIRFLSSLQ-DPNLVSILGV   92 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------------~~~~~e~~~l~~l~-h~niv~~~g~   92 (228)
                      .++|++.+.||+|+||.||+|....   +++.||+|.++                ..+.+|+.++.++. |+||++++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhccceeeeecCCCceEEEEEEEcC---cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            4679999999999999999999865   78999999872                34678999999995 9999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      +...+..+++|||+ ++++|.+++...                             +||+                    
T Consensus        93 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           93 YETNTFFFLVFDLM-KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             EECSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             eccCCeEEEEEecc-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence            99888899999999 999999998653                             2222                    


Q ss_pred             -----------------------c------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------R------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------~------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                             .      ....++.++||||||++++||++  +..||...+.......+......  
T Consensus       172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~--  247 (298)
T 1phk_A          172 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA--GSPPFWHRKQMLMLRMIMSGNYQ--  247 (298)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC--
T ss_pred             hhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH--CCCCCcCccHHHHHHHHhcCCcc--
Confidence                                   0      13356789999999999999999  67899887777666655543211  


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                        ...+....++.++.+++.+||+.+|.+|||+.++++
T Consensus       248 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          248 --FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             --CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              011222457899999999999999999999999986

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=1.6e-27  Score=207.91  Aligned_cols=172  Identities=19%  Similarity=0.299  Sum_probs=141.6

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +..++|++.++||+|+||.||++....   ++..||+|.+.          ..+.+|++++..++|+||+++++++.+.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  257 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD  257 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC
Confidence            566789999999999999999999875   78999999984          33678999999999999999999999998


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..++||||+ ++|+|.+++...                               |||+                       
T Consensus       258 ~l~lVmEy~-~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          258 ALCLVLTLM-NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             EEEEEECCC-CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEEcC-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence            999999999 999999988643                               3443                       


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh----HHHHHHHHHhhhCCCccccC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN----EQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~  179 (228)
                                          +.+..++.++|||||||++|||++  |..||.+.+.    ..+...+...        ..
T Consensus       337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLlt--G~~PF~~~~~~~~~~~i~~~i~~~--------~~  406 (576)
T 2acx_A          337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA--GQSPFQQRKKKIKREEVERLVKEV--------PE  406 (576)
T ss_dssp             CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHH--SSCSSSCSSSCCCHHHHHHHHHHC--------CC
T ss_pred             ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh--CCCCCcccccchhHHHHHHHhhcc--------cc
Confidence                                334467899999999999999999  6789987542    3344433322        23


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      ..+..++.++.+|+.+||+.||.+||     ++.++++|
T Consensus       407 ~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            45677899999999999999999999     78888864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=2.5e-27  Score=190.52  Aligned_cols=173  Identities=23%  Similarity=0.354  Sum_probs=140.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||++....   +++.||+|.+.         ..+.+|+.++++++|+||+++++++...+..++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            468899999999999999998865   68899999973         457899999999999999999999998888999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||+ ++++|.+++...                             +||+                             
T Consensus        99 v~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A           99 VGELY-TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             EECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred             EEEcc-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence            99999 999998877543                             2222                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ...+.++.++||||||+++++|++  +..||.+.+..+....+.....    ....+....++.
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  251 (287)
T 2wei_A          178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS--GTPPFYGKNEYDILKRVETGKY----AFDLPQWRTISD  251 (287)
T ss_dssp             SSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCC----CCCSGGGTTSCH
T ss_pred             CccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHcCCC----CCCchhhhhcCH
Confidence                            011246788999999999999999  6789988887777666654321    111222356889


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+++.+||+.+|.+|||+.+++++
T Consensus       252 ~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          252 DAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhcC
Confidence            99999999999999999999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=3.6e-27  Score=190.88  Aligned_cols=168  Identities=21%  Similarity=0.302  Sum_probs=134.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCCCCcceeeeeeeC--CC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQDPNLVSILGVCTG--EQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h~niv~~~g~~~~--~~   97 (228)
                      ++|++.+.||+|+||.||++....   .+..||+|.++           ..+.+|++++.+++|+||+++++++..  ..
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSE---TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTT---TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             cceeEeeEEecCCCeEEEEEEECC---CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            468899999999999999998765   77899999884           347889999999999999999999853  44


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ .++ |.+++...                               +||+                       
T Consensus        82 ~~~lv~e~~-~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           82 KMYMVMEYC-VCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             CEEEEEECC-SEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEehhc-cCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            789999999 755 66665432                               3333                       


Q ss_pred             -----------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -----------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -----------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                             ..  ...++.++||||||+++|||++  |..||.+.+.......+...        .
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~i~~~--------~  229 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT--GLYPFEGDNIYKLFENIGKG--------S  229 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHC--------C
T ss_pred             CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHh--CCCCCCCchHHHHHHHHhcC--------C
Confidence                                   00  1123668999999999999999  67999888777776666543        3


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+..++.++.+++.+||+.||.+|||+.+++++
T Consensus       230 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            44567889999999999999999999999999975

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=7.1e-28  Score=197.56  Aligned_cols=178  Identities=12%  Similarity=0.117  Sum_probs=138.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEE
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv  102 (228)
                      -.++|++.+.||+|+||.||+|....   +++.||||.+.     ..+.+|+.++.++ +|+||+++++++......+++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLY---TNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETT---TTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECC---CCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence            34679999999999999999998755   78999999884     4588999999999 999999999999988888999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+  +++|.+++...                              +||+                             
T Consensus        84 ~e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           84 LELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             EECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             EEeC--CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            9998  59999988642                              3333                             


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCC
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGG  173 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~  173 (228)
                                                 ..+..++.++||||||+++|||++  |..||.+.+..   +....+.......
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~--g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR--GSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhc--CCCCccccccccHHHHHHHHHhhhccC
Confidence                                       112346778999999999999999  67999875543   3333333222110


Q ss_pred             CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          174 ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       174 ~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .   .......++ ++.+++..||+.+|.+||++.+|.+.|+.+
T Consensus       240 ~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          240 P---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             C---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             C---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            0   000123355 999999999999999999999999999988

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=9e-28  Score=196.40  Aligned_cols=187  Identities=14%  Similarity=0.250  Sum_probs=140.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      +...+..++|++.+.||+|+||.||+|...    ++..||+|.++        ..+.+|+.++..++|+||+++++++..
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   98 (326)
T 3uim_A           23 RELQVASDNFSNKNILGRGGFGKVYKGRLA----DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT   98 (326)
T ss_dssp             HHHHTTTTSSCSTTEEECCSSSEEEEECCS----SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred             HHHHHHhhccccceeEecCCCcEEEEEEec----CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence            456667788999999999999999999754    67899999984        257899999999999999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------------Cccc----------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------------DNLT----------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~----------------  123 (228)
                      .+..+++|||+ ++|+|.+++...                                    +||+                
T Consensus        99 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  177 (326)
T 3uim_A           99 PTERLLVYPYM-ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD  177 (326)
T ss_dssp             SSCCEEEEECC-TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred             CCceEEEEEec-cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence            88899999999 999999887643                                    2222                


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCC-----ChHHHHHHHHHh
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHL-----TNEQVIQNAEHM  169 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~-----~~~~~~~~~~~~  169 (228)
                                                   .....++.++||||||+++|||++  |..||...     .......++...
T Consensus       178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH--CCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh--CCCcccccccccccchhHHHHHHHH
Confidence                                         113346789999999999999999  66888521     111122222222


Q ss_pred             hhCCCccccC------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          170 YYGGELQVFL------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       170 ~~~~~~~~~~------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..........      ..+...+.++.+++.+||+.+|.+|||+.+|+++|+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            1111111000      01122346799999999999999999999999999875

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=7e-28  Score=202.79  Aligned_cols=172  Identities=20%  Similarity=0.278  Sum_probs=132.4

Q ss_pred             Cceee-eeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHHHHHh-hCCCCCcceeeeeeeC----CCCCeEEE
Q psy796           32 CLRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREIRFLS-SLQDPNLVSILGVCTG----EQPPWLVM  103 (228)
Q Consensus        32 ~~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~~~l~-~l~h~niv~~~g~~~~----~~~~~lv~  103 (228)
                      +|.+. ++||+|+||.||++....   ++..||||+++  ..+.+|+.++. ..+|+||+++++++..    ....++||
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~  138 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM  138 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECC---CCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence            34554 689999999999998865   78899999995  56788998874 4589999999998865    44679999


Q ss_pred             eeccccCCHHHHhhhC-------------------------------Cccc-----------------------------
Q psy796          104 EYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------------  123 (228)
                      ||+ ++|+|.+++...                               |||+                             
T Consensus       139 E~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          139 ECL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             ECC-CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             EeC-CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            999 999999998653                               3333                             


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHH----HHHHHHHhhhCCCccccCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQ----VIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                       +....++.++|||||||++|||++  |..||.+.....    ....+.....    ....+..
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~i~~~~~----~~~~~~~  291 (400)
T 1nxk_A          218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC--GYPPFYSNHGLAISPGMKTRIRMGQY----EFPNPEW  291 (400)
T ss_dssp             ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHH--SSCSCCCCTTCSSCCSHHHHHHHTCC----CCCTTTT
T ss_pred             CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHh--CCCCCCCCccccccHHHHHHHHcCcc----cCCCccc
Confidence                             234567899999999999999999  668887654322    2333332211    1011223


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..++.++.+|+.+||+.||.+|||+.++++|
T Consensus       292 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            5689999999999999999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=1.1e-27  Score=196.06  Aligned_cols=175  Identities=20%  Similarity=0.281  Sum_probs=138.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH--------HHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG--------DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~--------~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|.+.+.||+|+||.||+|....   ++..||+|.++.        .+.+|+.+++.++|+||+++++++...+..+++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV   78 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC---CCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence            468899999999999999999865   688999998841        345799999999999999999999999899999


Q ss_pred             EeeccccCCHHHHhhhC------------------------------Cccc-----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------------  123 (228)
                      |||+ + |+|.+++...                              +||+                             
T Consensus        79 ~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           79 FEYL-D-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             EECC-S-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             eccc-c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence            9999 7 6888887643                              3333                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc----------
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV----------  177 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------  177 (228)
                                      .....++.++||||||+++|||++  |..||.+.+..+....+...........          
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT--GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF  234 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence                            122467899999999999999999  6799999888777666655332111000          


Q ss_pred             ------------cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          178 ------------FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       178 ------------~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                                  .......++.++.+|+.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                        00012356789999999999999999999999987

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=2.3e-27  Score=211.48  Aligned_cols=173  Identities=21%  Similarity=0.316  Sum_probs=144.9

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhC-CCCCcceeeeeee
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSL-QDPNLVSILGVCT   94 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l-~h~niv~~~g~~~   94 (228)
                      ..+..++|++.++||+|+||.||++....   .++.||||+++          ..+.+|..++..+ +|+||+++++++.
T Consensus       336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~  412 (674)
T 3pfq_A          336 DRMKLTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ  412 (674)
T ss_dssp             ----CTTEEEEEESSBTTTBCEEEEEESS---SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB
T ss_pred             ccccccceEEEEEEccCCCEEEEEEEECC---CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE
Confidence            34556789999999999999999999876   77899999985          2357788898887 7999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      +.+..++||||+ ++|+|.+++...                             |||+                      
T Consensus       413 ~~~~~~lV~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          413 TMDRLYFVMEYV-NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             CSSEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             eCCEEEEEEeCc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            988999999999 999999988653                             4444                      


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +....++.++|||||||++|||++  |..||.+.+..++...+...        ....
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyellt--G~~Pf~~~~~~~~~~~i~~~--------~~~~  561 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--GQAPFEGEDEDELFQSIMEH--------NVAY  561 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHSS--------CCCC
T ss_pred             cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHc--CCCCCCCCCHHHHHHHHHhC--------CCCC
Confidence                                  334578899999999999999999  67999998888887777653        3456


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTF-----KQIYS  212 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~-----~~v~~  212 (228)
                      |..++.++.+|+.+||+.||.+||++     ++|++
T Consensus       562 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            77899999999999999999999997     66664

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=1.4e-27  Score=192.93  Aligned_cols=183  Identities=20%  Similarity=0.374  Sum_probs=129.3

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhh--CCCCCcceeeeeeeCC----CC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSS--LQDPNLVSILGVCTGE----QP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~--l~h~niv~~~g~~~~~----~~   98 (228)
                      -.++|++.+.||+|+||.||+|.+     ++..||||++.    ..+.+|.+++..  ++|+||+++++++...    ..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-----QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-----CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            346789999999999999999987     67899999984    446677777766  7999999999986543    35


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------------Cccc-------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------------DNLT-------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~-------------------  123 (228)
                      .+++|||+ ++|+|.+++...                                    +||+                   
T Consensus        81 ~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           81 LWLITHYH-EMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEEEECCC-TTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             eEEehhhc-cCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            78999999 999998876432                                    3444                   


Q ss_pred             -----------------------------cccC------CCCCccchHHHHHHHHHHHhcC--------CCCCCCCCChH
Q psy796          124 -----------------------------RDRD------RYTCQSNVWSFAVTLWEILSLC--------RDKPFPHLTNE  160 (228)
Q Consensus       124 -----------------------------~~~~------~~~~~~Dv~s~Gv~l~el~~~~--------~~~p~~~~~~~  160 (228)
                                                   ....      .++.++||||||+++|||++|.        ...||......
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence                                         1111      2346899999999999999941        05777653221


Q ss_pred             -HHHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          161 -QVIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       .....+..........+..+.   +..++.++.+++.+||+.+|.+|||+.+|++.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence             111111111111111111111   123557899999999999999999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.6e-27  Score=194.45  Aligned_cols=175  Identities=19%  Similarity=0.338  Sum_probs=137.1

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCC--CCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQD--PNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h--~niv~~~g~~   93 (228)
                      ...+....|++.+.||+|+||.||++...    .+..||+|.+.         ..+.+|+.++..++|  +||+++++++
T Consensus         3 ~i~~~~~~y~i~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   78 (343)
T 3dbq_A            3 CISVKGRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   78 (343)
T ss_dssp             CEESSSCEEEEEEEESCCSSEEEEEEECT----TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             eeeeecCEEEEEEEEecCCCeEEEEEEeC----CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE
Confidence            34567778999999999999999999874    67889999883         557899999999976  9999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      ...+..+++||+  .+++|.+++...                             +||+                     
T Consensus        79 ~~~~~~~lv~e~--~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           79 ITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQ  156 (343)
T ss_dssp             ECSSEEEEEECC--CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC
T ss_pred             eeCCEEEEEEeC--CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccc
Confidence            998899999995  578999988654                             3333                     


Q ss_pred             ------------------------c-----------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHH
Q psy796          124 ------------------------R-----------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAE  167 (228)
Q Consensus       124 ------------------------~-----------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~  167 (228)
                                              +           ....++.++||||||+++|||++  |..||...... .....+.
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~  234 (343)
T 3dbq_A          157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY--GKTPFQQIINQISKLHAII  234 (343)
T ss_dssp             C------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHH--SSCTTTTCCSHHHHHHHHH
T ss_pred             cCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHh--CCCcchhhhhHHHHHHHHh
Confidence                                    0           01457788999999999999999  66899765433 2222222


Q ss_pred             HhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..      ......+...+.++.+++.+||+.||.+|||+.+++++
T Consensus       235 ~~------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          235 DP------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CT------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cC------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            11      11334566778899999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=2.3e-27  Score=189.98  Aligned_cols=172  Identities=16%  Similarity=0.243  Sum_probs=135.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeC------------
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTG------------   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~------------   95 (228)
                      .+|++.+.||+|+||.||++....   +++.||+|.++   ..+.+|++++.+++|+||+++++++..            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRI---DGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETT---TCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             cccceeeeeccCCceEEEEEEEcC---CCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            357889999999999999999865   68899999985   668899999999999999999998754            


Q ss_pred             ----CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------
Q psy796           96 ----EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------  123 (228)
Q Consensus        96 ----~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------  123 (228)
                          ....+++|||+ ++|+|.+++...                               +||+                 
T Consensus        88 ~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           88 SRSKTKCLFIQMEFC-DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             -CCEEEEEEEEECCC-CSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cccCcceEEEEEecc-CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcc
Confidence                23468999999 999999998542                               2222                 


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  177 (228)
                                                .....++.++||||||+++|||+++  ..|+..  .......+.          
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~--~~~~~~--~~~~~~~~~----------  232 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV--CDTAFE--TSKFFTDLR----------  232 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSC--CSSHHH--HHHHHHHHH----------
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhc--CCcchh--HHHHHHHhh----------
Confidence                                      2234578899999999999999994  455431  112222221          


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                      ....+..++.++.+++.+||+.+|.+|||+.+++++|..+.+.
T Consensus       233 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          233 DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            1223556889999999999999999999999999999999443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=4.1e-28  Score=198.83  Aligned_cols=167  Identities=19%  Similarity=0.305  Sum_probs=128.9

Q ss_pred             eeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEEeeccccCC
Q psy796           37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVMEYPAQLGD  111 (228)
Q Consensus        37 ~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~e~~~~~g~  111 (228)
                      +.||+|+||.||++....   .+..||+|.+.    ..+.+|+.++..+. |+||+++++++.+....+++|||+ ++|+
T Consensus        17 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~-~~~~   92 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKK---SNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL-NGGE   92 (325)
T ss_dssp             CCSEEETTEEEEEEEETT---TCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-CSCB
T ss_pred             CccccCCCeEEEEEEECC---CCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc-CCCc
Confidence            689999999999999875   68999999984    55788999999997 999999999999988899999999 9999


Q ss_pred             HHHHhhhC-----------------------------Cccc---------------------------------------
Q psy796          112 LVQHLNSA-----------------------------DNLT---------------------------------------  123 (228)
Q Consensus       112 L~~~l~~~-----------------------------r~l~---------------------------------------  123 (228)
                      |.+++...                             +||+                                       
T Consensus        93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t  172 (325)
T 3kn6_A           93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT  172 (325)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCC
Confidence            99988754                             3333                                       


Q ss_pred             --------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-------HHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 --------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-------EQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 --------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                              .....++.++||||||+++|||++  |..||.+.+.       .+....+..+.    ..........++++
T Consensus       173 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~s~~  246 (325)
T 3kn6_A          173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLS--GQVPFQSHDRSLTCTSAVEIMKKIKKGD----FSFEGEAWKNVSQE  246 (325)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHH--SSCTTC-------CCCHHHHHHHHTTTC----CCCCSHHHHTSCHH
T ss_pred             cCccCHHHhcCCCCCCccchHHHHHHHHHHHh--CCCCCCCCccccccccHHHHHHHHHcCC----CCCCcccccCCCHH
Confidence                    233457889999999999999999  6789876443       23333333221    00001112357899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+|+.+||+.||.+|||+.+++++
T Consensus       247 ~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          247 AKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             HHHHHHHHCCCChhHCCCHHHHhcC
Confidence            9999999999999999999998753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-26  Score=191.77  Aligned_cols=177  Identities=19%  Similarity=0.262  Sum_probs=135.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      .++|++.+.||+|+||.||+|....   ++..||+|.++            ..+.+|+.++..++|+||+++++++...+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             hcccEEEeEEeecCCEEEEEEEECC---CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            4568999999999999999998865   68899999984            24678999999999999999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ + ++|.+++...                              +||+                        
T Consensus        86 ~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           86 NISLVFDFM-E-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             CCEEEEECC-S-EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             ceEEEEEcC-C-CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            999999999 7 5888877543                              3333                        


Q ss_pred             --------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc--ccC-
Q psy796          124 --------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ--VFL-  179 (228)
Q Consensus       124 --------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-  179 (228)
                                          . ....++.++||||||+++|||++  |.+||.+.+..+....+..........  +.. 
T Consensus       164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred             CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence                                1 22347889999999999999999  678998888776666655432211000  000 


Q ss_pred             -----------C------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          180 -----------P------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       180 -----------~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                 +      ....++.++.+++.+||+.||.+|||+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                       0      014567899999999999999999999999875

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=4.1e-27  Score=204.50  Aligned_cols=171  Identities=18%  Similarity=0.268  Sum_probs=139.8

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +..++|.+.++||+|+||.||+++...   +++.||+|+++          ..+.+|+.++..++|+||+++++++...+
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  258 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKA---TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT  258 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC
Confidence            455778999999999999999999865   78999999984          34678999999999999999999999988


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc---------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT---------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~---------------------  123 (228)
                      ..++||||+ ++|+|.+++...                                 |||+                     
T Consensus       259 ~l~lVmE~~-~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          259 DLCLVMTIM-NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             EEEEEECCC-TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEEec-cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceee
Confidence            999999999 999999988542                                 3333                     


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC----hHHHHHHHHHhhhCCCcc
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT----NEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~  176 (228)
                                             +.+..++.++|||||||++|||++  |..||.+.+    ...+...+...       
T Consensus       338 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyellt--G~~PF~~~~~~~~~~~~~~~i~~~-------  408 (543)
T 3c4z_A          338 ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA--ARGPFRARGEKVENKELKQRVLEQ-------  408 (543)
T ss_dssp             ECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCTTCCCCHHHHHHHHHHC-------
T ss_pred             eccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHh--CCCCCCCCccchhHHHHHHHHhhc-------
Confidence                                   334468899999999999999999  678997653    23444444332       


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTF-----KQIYS  212 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~-----~~v~~  212 (228)
                       ....|..++.++.+++.+||+.+|.+||++     .++++
T Consensus       409 -~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          409 -AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence             344567889999999999999999999975     66664

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=1.7e-27  Score=195.36  Aligned_cols=194  Identities=20%  Similarity=0.312  Sum_probs=130.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHH--HhhCCCCCcceeeeeeeC--
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRF--LSSLQDPNLVSILGVCTG--   95 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~--l~~l~h~niv~~~g~~~~--   95 (228)
                      ..+.++.++|++.+.||+|+||.||+|..     .+..||+|++.    ..+..|.++  +..++|+||+++++.+..  
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEE-----CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccc
Confidence            35567888999999999999999999976     67899999984    445555555  445899999999985532  


Q ss_pred             ---CCCCeEEEeeccccCCHHHHhhhC-------------------------------------Cccc------------
Q psy796           96 ---EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------------DNLT------------  123 (228)
Q Consensus        96 ---~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------------r~l~------------  123 (228)
                         ....+++|||+ ++|+|.+++...                                     +||+            
T Consensus        81 ~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           81 ADGRMEYLLVMEYY-PNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             TTSCEEEEEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             cCCCceEEEEEecC-CCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence               22458999999 999999887543                                     2333            


Q ss_pred             ----------------------------------------ccc-------CCCCCccchHHHHHHHHHHHhcCCCCCCCC
Q psy796          124 ----------------------------------------RDR-------DRYTCQSNVWSFAVTLWEILSLCRDKPFPH  156 (228)
Q Consensus       124 ----------------------------------------~~~-------~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~  156 (228)
                                                              ..+       ..++.++||||||+++|||++|+ .++|.+
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~-~p~~~~  238 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC-TDLFPG  238 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTB-GGGSTT
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcC-CcCCCc
Confidence                                                    000       22345789999999999999953 344433


Q ss_pred             CChHH-------------HHHHHHHhhhCCCccccCCC----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-h
Q psy796          157 LTNEQ-------------VIQNAEHMYYGGELQVFLPK----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-T  218 (228)
Q Consensus       157 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~  218 (228)
                      .....             ....+.........++.++.    ...++.++.+++.+||+.||.+|||+.++++.|+.+ .
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            22110             00111111111111111111    122455899999999999999999999999999999 7


Q ss_pred             ccCCCC
Q psy796          219 NYKSNL  224 (228)
Q Consensus       219 ~~~~~~  224 (228)
                      .+.+|.
T Consensus       319 ~~~~~~  324 (336)
T 3g2f_A          319 IWERNK  324 (336)
T ss_dssp             CCCC--
T ss_pred             HHHhcc
Confidence            777764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.95  E-value=5.8e-27  Score=190.71  Aligned_cols=169  Identities=19%  Similarity=0.296  Sum_probs=132.3

Q ss_pred             CCceee-eeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.|++. +.||+|+||.||++....   ++..||||.++       ..+.+|++++.++ +|+||+++++++...+..++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l   88 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLI---TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL   88 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSS---SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcC---CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            346664 789999999999998765   78899999983       5688999999885 79999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-------------------c---------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------R---------  124 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------~---------  124 (228)
                      +|||+ ++|+|.+++...                             +||+                   +         
T Consensus        89 v~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           89 VFEKM-RGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             EEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             EEEcC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            99999 999999988643                             3332                   0         


Q ss_pred             --------------------------c-----cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh--------------
Q psy796          125 --------------------------D-----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN--------------  159 (228)
Q Consensus       125 --------------------------~-----~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~--------------  159 (228)
                                                .     ...++.++||||||+++|||++  |..||.+...              
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS--GYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH--SSCSCCCCCCSCSCC----CCHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHH--CCCCCcccccccccccccccchhH
Confidence                                      0     0235678999999999999999  6688876542              


Q ss_pred             -HHHHHHHHHhhhCCCccccCCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          160 -EQVIQNAEHMYYGGELQVFLPKP----SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       160 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ..+...+...        ....+    ..++.++.+++.+||+.||.+|||+.+++++
T Consensus       246 ~~~~~~~i~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          246 QNMLFESIQEG--------KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHC--------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhcc--------CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence             1223333322        11222    4578999999999999999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=2.7e-27  Score=195.36  Aligned_cols=197  Identities=12%  Similarity=0.080  Sum_probs=137.6

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------------HHHHHHHHHHhhCCCCCcc
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------------~~~~~e~~~l~~l~h~niv   87 (228)
                      ..+..++|.+.+.||+|+||.||+|........+..||+|...                  ..+.+|+..+..++|+||+
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~  111 (345)
T 2v62_A           32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIP  111 (345)
T ss_dssp             ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCC
T ss_pred             ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcc
Confidence            3456678999999999999999999986533356889999873                  2255778888889999999


Q ss_pred             eeeeeeeC----CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------
Q psy796           88 SILGVCTG----EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------  123 (228)
Q Consensus        88 ~~~g~~~~----~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------  123 (228)
                      ++++++..    ....+++|||+  +++|.+++...                             +||+           
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          112 LFYGSGLTEFKGRSYRFMVMERL--GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             CEEEEEEEESSSCEEEEEEEECE--EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST
T ss_pred             eeecccccccCCCcEEEEEEecc--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC
Confidence            99999877    56789999998  58999988653                             3333           


Q ss_pred             ------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hH
Q psy796          124 ------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NE  160 (228)
Q Consensus       124 ------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~  160 (228)
                                                                ..+..++.++||||||+++|||++  |..||.+.. ..
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~--g~~pf~~~~~~~  267 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC--GKLPWEQNLKDP  267 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH--SSCTTGGGTTCH
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh--CCCCcccccccc
Confidence                                                      122347889999999999999999  678996532 22


Q ss_pred             HHHHHHHHhhhCCCccc--cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCCCCCc
Q psy796          161 QVIQNAEHMYYGGELQV--FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL  226 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~~~~~  226 (228)
                      .................  ....+..++.++.+++.+||+.+|.+|||+.+|++.|+.+....+..|+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~  335 (345)
T 2v62_A          268 VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDF  335 (345)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCC
T ss_pred             HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCc
Confidence            22222211111100000  0011237889999999999999999999999999999988555555554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=2.7e-27  Score=193.71  Aligned_cols=191  Identities=18%  Similarity=0.321  Sum_probs=137.4

Q ss_pred             CCccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHH-HHhhCCCC
Q psy796           14 MGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIR-FLSSLQDP   84 (228)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~-~l~~l~h~   84 (228)
                      +.......+.+.|.+..++|++.+.||+|+||.||+|....   +++.||+|.++        ..+.+|+. +++.++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~   81 (327)
T 3aln_A            5 SSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKP---SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP   81 (327)
T ss_dssp             CCEEEECCCCEEECCCSCSEEC-CEEEECSSEEEEEEEETT---TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCT
T ss_pred             ccCCcCCChHHhcccCHHHhhehheeccCCCEEEEEEEEcC---CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCC
Confidence            33345566678999999999999999999999999999865   68999999884        23455665 66778999


Q ss_pred             CcceeeeeeeCCCCCeEEEeeccccCCHHHHhhh-----C------------------------------Cccc------
Q psy796           85 NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS-----A------------------------------DNLT------  123 (228)
Q Consensus        85 niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~-----~------------------------------r~l~------  123 (228)
                      ||+++++++...+..+++|||+ + |+|.+++..     .                              +||+      
T Consensus        82 niv~~~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll  159 (327)
T 3aln_A           82 YIVQFYGALFREGDCWICMELM-S-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL  159 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEECCC-S-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE
T ss_pred             cEeeeeeEEEeCCceEEEEeec-C-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE
Confidence            9999999999988899999999 7 577666542     1                              3333      


Q ss_pred             -------------------------------------c----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHH
Q psy796          124 -------------------------------------R----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV  162 (228)
Q Consensus       124 -------------------------------------~----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~  162 (228)
                                                           .    ....++.++||||||+++|||++  |..||.+.+..  
T Consensus       160 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~--  235 (327)
T 3aln_A          160 DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT--GRFPYPKWNSV--  235 (327)
T ss_dssp             ETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHH--SCCCSSCC-----
T ss_pred             cCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHH--CCCCCCCcchH--
Confidence                                                 1    34457889999999999999999  66888765432  


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+..................++.++.+++.+||+.+|.+|||+.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          236 FDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ----CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            111111111111010111234588999999999999999999999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=6.2e-27  Score=188.42  Aligned_cols=174  Identities=17%  Similarity=0.231  Sum_probs=134.8

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC---
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG---   95 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~---   95 (228)
                      .....+.+.+.||+|+||.||+|....   .+..||+|.+.         ..+.+|+.++++++|+||+++++++..   
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecC---CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence            344557888999999999999998865   77899999873         447899999999999999999998864   


Q ss_pred             -CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------------
Q psy796           96 -EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------------  123 (228)
Q Consensus        96 -~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------------  123 (228)
                       ....+++|||+ ++|+|.+++...                               +||+                    
T Consensus       100 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          100 GKKCIVLVTELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             SCEEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             CCceEEEEEEec-CCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence             23579999999 999999988652                               2222                    


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~  180 (228)
                                            .....++.++||||||+++++|++  +..||...... .....+.....      ...
T Consensus       179 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~------~~~  250 (290)
T 1t4h_A          179 ATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PAS  250 (290)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGG
T ss_pred             cccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHh--CCCCCCCcCcHHHHHHHHhccCC------ccc
Confidence                                  112346889999999999999999  66899875544 33333332210      112


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .+...+.++.+++.+||+.+|.+|||+.+++++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            345567899999999999999999999999874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=3.7e-27  Score=197.18  Aligned_cols=179  Identities=15%  Similarity=0.171  Sum_probs=134.4

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCC-------
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGE-------   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~-------   96 (228)
                      +....+|++.+.||+|+||.||+|....   ++..||+|.+.   ....+|+++++.++|+||+++++++...       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~   79 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIE---SGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP   79 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETT---TCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECC---CCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence            4556789999999999999999998865   78999999884   3356899999999999999999998432       


Q ss_pred             -------------------------------CCCeEEEeeccccCCHHHHhhh----C----------------------
Q psy796           97 -------------------------------QPPWLVMEYPAQLGDLVQHLNS----A----------------------  119 (228)
Q Consensus        97 -------------------------------~~~~lv~e~~~~~g~L~~~l~~----~----------------------  119 (228)
                                                     ...+++|||+ + |+|.+.+..    .                      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-P-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             ------------------------------CCEEEEEECCC-S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCCceEEEEEEecC-C-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           2378999999 7 677766542    1                      


Q ss_pred             -------Cccc---------------------------------------------cccCCCCCccchHHHHHHHHHHHh
Q psy796          120 -------DNLT---------------------------------------------RDRDRYTCQSNVWSFAVTLWEILS  147 (228)
Q Consensus       120 -------r~l~---------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~  147 (228)
                             +||+                                             .....++.++||||||+++|||++
T Consensus       158 H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          158 HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence                   3443                                             112348899999999999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHhhhCCCc-----------ccc----------CCCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy796          148 LCRDKPFPHLTNEQVIQNAEHMYYGGEL-----------QVF----------LPKPSLCPRDIYDLMCDCWKRDQTMRPT  206 (228)
Q Consensus       148 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~----------~~~~~~~~~~l~~li~~c~~~~p~~Rps  206 (228)
                        |..||.+.+..+....+.........           ...          ...+..++.++.+|+.+||+.+|.+|||
T Consensus       238 --g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (383)
T 3eb0_A          238 --GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN  315 (383)
T ss_dssp             --SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             --CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence              67999988877665555432211000           000          0124567889999999999999999999


Q ss_pred             HHHHHH
Q psy796          207 FKQIYS  212 (228)
Q Consensus       207 ~~~v~~  212 (228)
                      +.++++
T Consensus       316 ~~e~l~  321 (383)
T 3eb0_A          316 PYEAMA  321 (383)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.95  E-value=4.7e-27  Score=201.29  Aligned_cols=176  Identities=18%  Similarity=0.205  Sum_probs=133.4

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ----   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~----   97 (228)
                      ++|++.+.||+|+||.||+|....   .++.||||++.         ..+.+|+.+++.++|+||+++++++....    
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             CCeEEEEEeecCCCeEEEEEEECC---CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            568889999999999999998865   78999999983         45779999999999999999999997654    


Q ss_pred             --CCeEEEeeccccCCHHHHhhhC---------------------------Cccc-------------------------
Q psy796           98 --PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-------------------------  123 (228)
Q Consensus        98 --~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-------------------------  123 (228)
                        ..++||||+ . ++|.+.+...                           |||+                         
T Consensus       139 ~~~~~lv~E~~-~-~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          139 FQDVYLVMELM-D-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             CCEEEEEEECC-S-EEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             CCeEEEEEeCC-C-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence              359999999 7 4565544322                           4444                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----------  175 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------  175 (228)
                                        +.+..++.++|||||||+++||++  |..||.+.+..+....+.........          
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~  294 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  294 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred             CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence                              334568899999999999999999  67999998877666655443211000          


Q ss_pred             ------c---ccCCC----CCC-----------CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ------Q---VFLPK----PSL-----------CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ------~---~~~~~----~~~-----------~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            .   .....    +..           .+.++.+|+.+||+.||.+|||+.++++|
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                  0   00000    000           14678999999999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.95  E-value=1.8e-27  Score=195.20  Aligned_cols=184  Identities=19%  Similarity=0.248  Sum_probs=141.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.+.-..++|++.+.||+|+||.||++....   .+..||+|.+.         ..+.+|+.++.+++|+||+++++++.
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   94 (331)
T 4aaa_A           18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKD---TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK   94 (331)
T ss_dssp             -CCCBCGGGEEEEEEGGGGTTSSEEEEEETT---TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhhhhhhhheeeeEEeecCCEEEEEEEECC---CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee
Confidence            4555566789999999999999999999865   68899999872         44678999999999999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      ..+..+++|||+ ++++|.+++...                             +||+                      
T Consensus        95 ~~~~~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           95 KKKRWYLVFEFV-DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFART  173 (331)
T ss_dssp             ETTEEEEEEECC-SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             cCCEEEEEEecC-CcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence            988899999999 988888765432                             3333                      


Q ss_pred             ----------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-------
Q psy796          124 ----------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-------  173 (228)
Q Consensus       124 ----------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------  173 (228)
                                            . ....++.++||||||+++|||++  |..||.+.+..+....+.......       
T Consensus       174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (331)
T 4aaa_A          174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM--GEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL  251 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCChhhhhH
Confidence                                  1 12367889999999999999999  669998887766554443321110       


Q ss_pred             ---------CccccCC-------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ---------ELQVFLP-------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ---------~~~~~~~-------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               ...+...       ....+++++.+|+.+||+.||.+|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                     0000000       023578999999999999999999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.95  E-value=2.2e-27  Score=189.46  Aligned_cols=171  Identities=19%  Similarity=0.254  Sum_probs=134.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.+.        ..+.+|+.+++.++|+||+++++++...+..+++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECC---CCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            357889999999999999998865   68899999883        5578999999999999999999999988888999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||+ ++++|.+++...                             +||+                              
T Consensus        84 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           84 LEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEec-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            9999 989998887653                             2222                              


Q ss_pred             ----------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ----------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ----------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                      ..... ++.++||||||++++||++  |..||...+.. .....+....      ........+
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~  234 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEYSDWKEKK------TYLNPWKKI  234 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHH--SSCCCSCSCTTSHHHHHHHTTC------TTSTTGGGS
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCchHHHHHHHhhhcc------cccCchhhc
Confidence                            11122 3678999999999999999  67898776543 2222222110      022234567


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.++.+++.+||+.+|.+|||+.+++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          235 DSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            8999999999999999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=8.2e-27  Score=187.41  Aligned_cols=174  Identities=17%  Similarity=0.268  Sum_probs=132.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---------HHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---------DSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---------~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      +++..++|++.+.||+|+||.||++....   +++.||+|.++.         .+.++...++.++|+||+++++++...
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~   78 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVP---SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE   78 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecC---CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc
Confidence            56778899999999999999999999865   789999998841         133444557788999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC----------------------------------Cccc-------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA----------------------------------DNLT-------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~----------------------------------r~l~-------------------  123 (228)
                      +..+++|||+ + |+|.+++...                                  +||+                   
T Consensus        79 ~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T 3fme_A           79 GDVWICMELM-D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI  156 (290)
T ss_dssp             SSEEEEEECC-S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--
T ss_pred             CCEEEEEehh-c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCC
Confidence            8999999999 7 5887765431                                  3333                   


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-HHHHHHHHHhhhCCC
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~  174 (228)
                                                  .....++.++||||||++++||++  +..||..... ...........   .
T Consensus       157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~---~  231 (290)
T 3fme_A          157 SGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI--LRFPYDSWGTPFQQLKQVVEEP---S  231 (290)
T ss_dssp             -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHH--TSCSSCCCSCHHHHHHHHHHSC---C
T ss_pred             cccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHH--CCCCccccCchHHHHHHHhccC---C
Confidence                                        133457789999999999999999  5688876433 23322222211   0


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                         ....+..++.++.+++.+||+.+|.+|||+.++++
T Consensus       232 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 ---PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             ---CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence               12224568899999999999999999999999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.95  E-value=1.5e-26  Score=187.73  Aligned_cols=178  Identities=17%  Similarity=0.224  Sum_probs=136.6

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhC---CCCCcceeeeee
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSL---QDPNLVSILGVC   93 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l---~h~niv~~~g~~   93 (228)
                      -.++|++.+.||+|+||.||+|....   .++.||+|.++            ..+.+|+.+++.+   .|+||+++++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~   83 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC   83 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTT---TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence            34679999999999999999998765   78999999984            3677888888776   499999999999


Q ss_pred             eCCC-----CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------
Q psy796           94 TGEQ-----PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------  123 (228)
Q Consensus        94 ~~~~-----~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------  123 (228)
                      ....     ..+++|||+ . |+|.+++...                               +||+              
T Consensus        84 ~~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           84 ATSRTDREIKVTLVFEHV-D-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             EECCSSSEEEEEEEEECC-C-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEE
T ss_pred             eccCCCCceeEEEEehhh-h-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence            7654     368999998 6 7999988653                               3333              


Q ss_pred             -----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 -----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 -----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                   .....++.++||||||+++|||++  +..||.+.+..+....+........
T Consensus       162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~  239 (308)
T 3g33_A          162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR--RKPLFCGNSEADQLGKIFDLIGLPP  239 (308)
T ss_dssp             CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT--SSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCC
Confidence                                         234567899999999999999999  6799998888776666654322110


Q ss_pred             ccc----------cCC---------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQV----------FLP---------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~----------~~~---------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...          .++         ....+++++.+++.+||+.||.+|||+.++++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            000          000         013578899999999999999999999999874

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=7.1e-27  Score=191.47  Aligned_cols=171  Identities=17%  Similarity=0.258  Sum_probs=138.7

Q ss_pred             ceee-eeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeE
Q psy796           33 LRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        33 ~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~l  101 (228)
                      +.+. +.||+|+||.||+|....   +++.||+|.++         ..+.+|+.++..+ .|+||+++++++...+..++
T Consensus        30 y~~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l  106 (327)
T 3lm5_A           30 YILTSKELGRGKFAVVRQCISKS---TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL  106 (327)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EeeccceeCCCCCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence            4444 889999999999998865   68999999884         5688999999998 56999999999999888999


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ ++|+|.+++...                               +||+                           
T Consensus       107 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~  185 (327)
T 3lm5_A          107 ILEYA-AGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG  185 (327)
T ss_dssp             EEECC-TTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred             EEEec-CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence            99999 999998887432                               3333                           


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....++.++||||||+++|||++  +..||.+.+..+....+......    .....+..
T Consensus       186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~  259 (327)
T 3lm5_A          186 HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT--HTSPFVGEDNQETYLNISQVNVD----YSEETFSS  259 (327)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCTTTTTT
T ss_pred             CccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCchHHHHHHHhcccc----cCchhhcc
Confidence                               233567889999999999999999  67999888877766665543211    12233456


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.++.+++.+||+.+|.+|||+.+++++
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          260 VSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            88999999999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=1.8e-26  Score=191.99  Aligned_cols=173  Identities=17%  Similarity=0.258  Sum_probs=138.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhC-CCCCcceeeeeee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSL-QDPNLVSILGVCT   94 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l-~h~niv~~~g~~~   94 (228)
                      ++|++.+.||+|+||.||+|....   ++..||||+++               ..+.+|+.++.++ +|+||+++++++.
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRA---TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECC---CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            357778999999999999999865   68899999872               3467899999998 7999999999999


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      ..+..+++|||+ ++++|.+++...                             +|++                      
T Consensus       171 ~~~~~~lv~e~~-~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~  249 (365)
T 2y7j_A          171 SSSFMFLVFDLM-RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH  249 (365)
T ss_dssp             BSSEEEEEECCC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             eCCEEEEEEEeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence            888899999999 999999988643                             3333                      


Q ss_pred             ---------------------c------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------R------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------~------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                           .      ....++.++||||||+++|||++  |..||.+.+.......+......    
T Consensus       250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~----  323 (365)
T 2y7j_A          250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA--GSPPFWHRRQILMLRMIMEGQYQ----  323 (365)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----
T ss_pred             cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhCCCC----
Confidence                                 0      12247789999999999999999  67899887776666655543211    


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+.+..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       324 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0111124678899999999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=1.7e-27  Score=201.53  Aligned_cols=173  Identities=21%  Similarity=0.275  Sum_probs=133.6

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---------------HHHHHHHHHhhCCCCCcceeeeeee
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---------------DSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---------------~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      .++|.+.+.||+|+||.||+|....   .+..||+|.+..               .+.+|+.++.+++||||+++++++.
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERK---TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECC---CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            3578899999999999999998876   788999999842               3789999999999999999999986


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      .+ ..+++|||+ ++|+|.+++...                             +||+                      
T Consensus       211 ~~-~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          211 AE-DYYIVLELM-EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             SS-EEEEEEECC-TTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             cC-ceEEEEEcC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence            54 479999999 999998877544                             3333                      


Q ss_pred             ------------------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCc
Q psy796          124 ------------------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ------------------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~  175 (228)
                                              +   ....++.++||||||+++|||++  |..||...... .....+.....    
T Consensus       289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt--g~~pf~~~~~~~~~~~~i~~~~~----  362 (419)
T 3i6u_A          289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQVSLKDQITSGKY----  362 (419)
T ss_dssp             TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH--SSCSSCCCSSSCCHHHHHHTTCC----
T ss_pred             ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH--CCCCCCCCcchHHHHHHHhcCCC----
Confidence                                    1   12456779999999999999999  67898765433 23333332211    


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ......+..++.++.+++.+||+.+|.+|||+.++++|
T Consensus       363 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00011124678999999999999999999999999873

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=9e-27  Score=195.42  Aligned_cols=176  Identities=19%  Similarity=0.331  Sum_probs=136.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC--CCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ--DPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~--h~niv~~~g~   92 (228)
                      +...+....|++.+.||+|+||.||++...    .+..||||.+.         ..+.+|+.++.++.  |+||++++++
T Consensus        49 ~~~~~~~~~y~~~~~LG~G~fg~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~  124 (390)
T 2zmd_A           49 ECISVKGRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY  124 (390)
T ss_dssp             CCEEETTEEEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             ccccccCCceEEEEEEccCCCeEEEEEEcC----CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEE
Confidence            344555667999999999999999999864    57889999883         45789999999996  5999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      +...+..+++|| + .+++|.+++...                             |||+                    
T Consensus       125 ~~~~~~~~lv~E-~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~  202 (390)
T 2zmd_A          125 EITDQYIYMVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIAN  202 (390)
T ss_dssp             EECSSEEEEEEE-C-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSC
T ss_pred             EecCCEEEEEEe-c-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccc
Confidence            999888999999 5 678999988654                             3333                    


Q ss_pred             -------------------------cc-----------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHH
Q psy796          124 -------------------------RD-----------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNA  166 (228)
Q Consensus       124 -------------------------~~-----------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~  166 (228)
                                               +.           ...++.++|||||||++|||++  |..||...... .....+
T Consensus       203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~--G~~Pf~~~~~~~~~~~~~  280 (390)
T 2zmd_A          203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY--GKTPFQQIINQISKLHAI  280 (390)
T ss_dssp             CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHH--SSCTTTTCCCHHHHHHHH
T ss_pred             cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHH--CCCcchhhhHHHHHHHHH
Confidence                                     00           1357889999999999999999  67899765432 233322


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....      .....+...+.++.+|+.+||+.||.+|||+.+++++
T Consensus       281 ~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          281 IDPN------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HCTT------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hCcc------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            2211      1234466678899999999999999999999999875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=9.6e-27  Score=194.94  Aligned_cols=176  Identities=20%  Similarity=0.290  Sum_probs=130.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC-CCCcceeeeeeeCCC--C
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQ--P   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~--~   98 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.+.         ..+.+|+.++..+. |+||+++++++...+  .
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRR---TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETT---TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             CceEEEEEeeeCCCeEEEEEEECC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            468999999999999999998865   78999999873         44678999999997 999999999997654  6


Q ss_pred             CeEEEeeccccCCHHHHhhhC----------------------------Cccc---------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA----------------------------DNLT---------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~---------------------------  123 (228)
                      .++||||+ + |+|.+++...                            |||+                           
T Consensus        86 ~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           86 VYLVFDYM-E-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEEEEECC-S-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEEeccc-C-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            79999999 7 6888877643                            3443                           


Q ss_pred             ---------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHH
Q psy796          124 ---------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQ  164 (228)
Q Consensus       124 ---------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~  164 (228)
                                                             .....++.++|||||||+++||++  |.+||.+.+..+...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~  241 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC--GKPIFPGSSTMNQLE  241 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHH
Confidence                                                   012457899999999999999999  679999888776665


Q ss_pred             HHHHhhhCCCcc---------------------------------------ccCCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy796          165 NAEHMYYGGELQ---------------------------------------VFLPKPSLCPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       165 ~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~l~~li~~c~~~~p~~Rp  205 (228)
                      .+..........                                       .....+..+++++.+|+.+||+.||.+||
T Consensus       242 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~  321 (388)
T 3oz6_A          242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRI  321 (388)
T ss_dssp             HHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCC
Confidence            554322110000                                       00011236789999999999999999999


Q ss_pred             CHHHHHHH
Q psy796          206 TFKQIYSF  213 (228)
Q Consensus       206 s~~~v~~~  213 (228)
                      |+.++++|
T Consensus       322 t~~e~l~H  329 (388)
T 3oz6_A          322 SANDALKH  329 (388)
T ss_dssp             CHHHHTTS
T ss_pred             CHHHHhCC
Confidence            99999986

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=1.5e-27  Score=195.04  Aligned_cols=167  Identities=17%  Similarity=0.271  Sum_probs=125.1

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC-----
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP-----   98 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~-----   98 (228)
                      +|++.+.||+|+||.||+|....   ++..||||.++        ..+.+|+.++++++||||+++++++...+.     
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETT---TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcC---CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            57889999999999999999865   78899999884        568899999999999999999999855432     


Q ss_pred             ----------------------------------------------------CeEEEeeccccCCHHHHhhhC-------
Q psy796           99 ----------------------------------------------------PWLVMEYPAQLGDLVQHLNSA-------  119 (228)
Q Consensus        99 ----------------------------------------------------~~lv~e~~~~~g~L~~~l~~~-------  119 (228)
                                                                          .+++|||+ ++|+|.+++...       
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLC-RKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECC-CSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEec-CCCCHHHHHhcccCccchh
Confidence                                                                68999999 999999988653       


Q ss_pred             -------------------------Cccc---------------------------------------------------
Q psy796          120 -------------------------DNLT---------------------------------------------------  123 (228)
Q Consensus       120 -------------------------r~l~---------------------------------------------------  123 (228)
                                               +||+                                                   
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence                                     3333                                                   


Q ss_pred             -----cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhc
Q psy796          124 -----RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWK  198 (228)
Q Consensus       124 -----~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~  198 (228)
                           ..+..++.++||||||+++|||++  +..|+.  ........+...    .   ....+...+.++.+++.+||+
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~--~~~~~~--~~~~~~~~~~~~----~---~~~~~~~~~~~~~~li~~~l~  311 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLY--SFSTQM--ERVRIITDVRNL----K---FPLLFTQKYPQEHMMVQDMLS  311 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHS--CCCCHH--HHHHHHHHHHTT----C---CCHHHHHHCHHHHHHHHHHHC
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHH--cCCChh--HHHHHHHHhhcc----C---CCcccccCChhHHHHHHHHcc
Confidence                 112357889999999999999999  434321  111122222111    0   011123346788999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy796          199 RDQTMRPTFKQIYSF  213 (228)
Q Consensus       199 ~~p~~Rps~~~v~~~  213 (228)
                      .+|.+|||+.+++++
T Consensus       312 ~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          312 PSPTERPEATDIIEN  326 (332)
T ss_dssp             SSGGGSCCHHHHHHS
T ss_pred             CCCCcCCCHHHHhhc
Confidence            999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=4.2e-27  Score=188.54  Aligned_cols=167  Identities=15%  Similarity=0.216  Sum_probs=131.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.++         ..+.+|+..+..+ +|+||+++++++...+..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRL---DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcC---CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            458889999999999999999865   68999999884         4578899999998 8999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC---------------------------------Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA---------------------------------DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~---------------------------------r~l~------------------------  123 (228)
                      ++|||+ ++++|.+++...                                 +||+                        
T Consensus        88 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           88 IQNEYC-NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EEEECC-TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEec-CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            999999 999999998642                                 2332                        


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          .....++.++||||||++++||++  +.+++...   .....+.
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--~~~~~~~~---~~~~~~~  241 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG--AEPLPRNG---DQWHEIR  241 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT--CCCCCSSS---HHHHHHH
T ss_pred             cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc--CCCCCcch---hHHHHHH
Confidence                                                011144579999999999999998  44444322   2222232


Q ss_pred             HhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...       ....+..++.++.+++.+||+.||.+|||+.+++++
T Consensus       242 ~~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          242 QGR-------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             TTC-------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             cCC-------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            221       233466789999999999999999999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=3.2e-27  Score=194.31  Aligned_cols=190  Identities=19%  Similarity=0.268  Sum_probs=126.4

Q ss_pred             cccCCCCCcccccCCCcee-eeeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHH-HHHhhCCCCCcceeeee
Q psy796           17 SYKCREGDVVPIPRYCLRV-LERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREI-RFLSSLQDPNLVSILGV   92 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~-~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~-~~l~~l~h~niv~~~g~   92 (228)
                      ....|..+.+.+..+ |.+ .++||+|+||.||+|....   +++.||+|++.  ....+|+ ..+..+.|+||++++++
T Consensus        15 ~~~~p~~~~~~~~~~-y~i~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~   90 (336)
T 3fhr_A           15 LFQGPEPKKYAVTDD-YQLSKQVLGLGVNGKVLECFHRR---TGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDV   90 (336)
T ss_dssp             -----CCBCSCGGGT-EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             cccCCCCCCccccce-eEecceeeeeCCCeEEEEEEECC---CCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHH
Confidence            344555566666555 776 4579999999999999875   68999999985  3334444 34567799999999999


Q ss_pred             eeC----CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc--------------
Q psy796           93 CTG----EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT--------------  123 (228)
Q Consensus        93 ~~~----~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~--------------  123 (228)
                      +..    ....+++|||+ ++|+|.+++...                               +||+              
T Consensus        91 ~~~~~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  169 (336)
T 3fhr_A           91 YENMHHGKRCLLIIMECM-EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV  169 (336)
T ss_dssp             EEEEETTEEEEEEEEECC-TTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCC
T ss_pred             HhhccCCCceEEEEEecc-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCce
Confidence            875    33478999999 999999998653                               2222              


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     .....++.++||||||+++|||++  |..||..................
T Consensus       170 ~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~  247 (336)
T 3fhr_A          170 LKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC--GFPPFYSNTGQAISPGMKRRIRL  247 (336)
T ss_dssp             EEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHH--SSCCC------------------
T ss_pred             EEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHH--CCCCCCCccchhhhhhHHHhhhc
Confidence                                           113345678999999999999999  66888766554332221111111


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .......+....++.++.+++.+||+.+|.+|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          248 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11111122235689999999999999999999999999984

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.5e-26  Score=189.74  Aligned_cols=184  Identities=20%  Similarity=0.408  Sum_probs=130.0

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhC--CCCCcceeeeeeeCC----CCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSL--QDPNLVSILGVCTGE----QPP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l--~h~niv~~~g~~~~~----~~~   99 (228)
                      .++|++.+.||+|+||.||+|..     .+..||+|.+.    ..+.+|.+++...  +|+||+++++++...    ...
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKW-----RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEE-----CCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            35789999999999999999987     57899999984    3455666666554  899999999998876    567


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------------Cccc--------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------------DNLT--------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~--------------------  123 (228)
                      +++|||+ ++|+|.+++...                                    +||+                    
T Consensus       111 ~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          111 YLITDYH-ENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecc-CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            9999999 999999887543                                    3333                    


Q ss_pred             ----------------------------cccCCCCC------ccchHHHHHHHHHHHhcCC--------CCCCCCCChHH
Q psy796          124 ----------------------------RDRDRYTC------QSNVWSFAVTLWEILSLCR--------DKPFPHLTNEQ  161 (228)
Q Consensus       124 ----------------------------~~~~~~~~------~~Dv~s~Gv~l~el~~~~~--------~~p~~~~~~~~  161 (228)
                                                  ......+.      ++||||||+++|||++|+.        ..||.......
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence                                        11111222      3899999999999999410        56665543211


Q ss_pred             -HHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          162 -VIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       162 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                       ....+..........+..+.   +..++.++.+++.+||+.+|.+|||+.+|+++|+.+.+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence             11111111111111111111   22467789999999999999999999999999999944

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3.2e-27  Score=195.76  Aligned_cols=175  Identities=18%  Similarity=0.253  Sum_probs=137.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhC-CCCCcceeeeeeeC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSL-QDPNLVSILGVCTG   95 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l-~h~niv~~~g~~~~   95 (228)
                      +..++|++.+.||+|+||.||++........+..||||+++           ..+.+|++++..+ +|+||+++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  130 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  130 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence            34468999999999999999999885433368999999884           4467899999999 69999999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      .+..++||||+ ++|+|.+++...                             +||+                       
T Consensus       131 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          131 ETKLHLILDYI-NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             TTEEEEEECCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             CceEEEEeecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            88899999999 999999988643                             3333                       


Q ss_pred             ----------------------cc--cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh----HHHHHHHHHhhhCCCc
Q psy796          124 ----------------------RD--RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN----EQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------~~--~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~  175 (228)
                                            ..  ...++.++||||||+++|||++  |..||.....    ..+...+...      
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~------  281 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT--GASPFTVDGEKNSQAEISRRILKS------  281 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH--SSCTTSCTTSCCCHHHHHHHHHHC------
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHH--CCCCCccCCccchHHHHHHHHhcc------
Confidence                                  11  1346789999999999999999  5688865332    2232222221      


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                        ..+.+..++..+.+|+.+||+.||.+||     ++.+++++
T Consensus       282 --~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          282 --EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             --CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence              3345677899999999999999999999     99999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=4.1e-27  Score=197.80  Aligned_cols=184  Identities=17%  Similarity=0.263  Sum_probs=138.3

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCC--
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQ--   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~--   97 (228)
                      .....|.+.+.||+|+||.||+|....   .+..||+|.++        ..+.+|++++.+++|+||+++++++...+  
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~   82 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC
Confidence            345678999999999999999999875   68999999984        45779999999999999999999998765  


Q ss_pred             CCeEEEeeccccCCHHHHhhhC--------------------------------Cccc----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~----------------------  123 (228)
                      ..+++|||+ ++|+|.+++...                                +||+                      
T Consensus        83 ~~~lv~e~~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           83 HKVLIMEFC-PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CEEEEECCC-TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             eeEEEEecC-CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            569999999 999999988643                                3333                      


Q ss_pred             -------------------------cc--------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC----hHHHHHHH
Q psy796          124 -------------------------RD--------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT----NEQVIQNA  166 (228)
Q Consensus       124 -------------------------~~--------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~----~~~~~~~~  166 (228)
                                               ..        ...++.++||||||+++|||++  |..||....    ..+....+
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t--g~~Pf~~~~~~~~~~~~~~~~  239 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRRNKEVMYKI  239 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH--SSCSEECTTCTTTCHHHHHHH
T ss_pred             CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCcccchHHHHHHH
Confidence                                     00        1334568999999999999999  568886533    23344444


Q ss_pred             HHhhhCCCc-------------cccCCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          167 EHMYYGGEL-------------QVFLPKP----SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       167 ~~~~~~~~~-------------~~~~~~~----~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .........             ....+.+    ..++..+.+++.+||+.||++||++.++++.++.+
T Consensus       240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            332211100             0011111    22356788999999999999999999999999998

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=4.4e-27  Score=193.49  Aligned_cols=163  Identities=20%  Similarity=0.349  Sum_probs=132.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH---------------HHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG---------------DSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~---------------~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.++.               .+.+|+.++.+++|+||+++++++.+
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKE---KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETT---TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cceEEEeEEEecCCEEEEEEEECC---CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            458889999999999999998765   789999998842               35679999999999999999999999


Q ss_pred             CCCCeEEEeeccccC-CHHHHhhhC-----------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLG-DLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g-~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      .+..+++|||+ ..| +|.+++...                             +||+                      
T Consensus       101 ~~~~~lv~e~~-~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          101 QGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             SSEEEEEEECC-TTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEEeC-CCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            88899999998 666 999888654                             3333                      


Q ss_pred             ---------------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ---------------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ---------------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                           .....+ +.++||||||+++|||++  +..||......              .......
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~--------------~~~~~~~  243 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF--EENPFCELEET--------------VEAAIHP  243 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH--SSCSCSSGGGG--------------TTTCCCC
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHh--CCCchhhHHHH--------------HhhccCC
Confidence                                 122233 788999999999999999  66888652211              0113345


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      |..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       244 ~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          244 PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            66789999999999999999999999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=5.8e-27  Score=191.41  Aligned_cols=171  Identities=20%  Similarity=0.262  Sum_probs=133.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ++|.+.+.||+|+||.||+|....   .+..||||.+.               ..+.+|++++.+++|+||+++++++..
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERK---TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hceeEeeEEecCCCEEEEEEEEcC---CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            458899999999999999998865   78999999873               237789999999999999999999876


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      +. .+++|||+ ++++|.+++...                             +||+                       
T Consensus        87 ~~-~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           87 ED-YYIVLELM-EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             SS-EEEEEECC-TTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             Cc-eEEEEecC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            54 89999999 999999887654                             2222                       


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCcc
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~  176 (228)
                                                .....++.++||||||+++|||++  |..||...... .....+......    
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~----  238 (322)
T 2ycf_A          165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQVSLKDQITSGKYN----  238 (322)
T ss_dssp             EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHH--SSCSSCSTTCSSCHHHHHHHTCCC----
T ss_pred             eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHh--CCCCCcccchHHHHHHHHHhCccc----
Confidence                                      123567889999999999999999  66888765433 333333332110    


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      .....+..++.++.+++.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            000113567899999999999999999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.94  E-value=1.4e-26  Score=189.47  Aligned_cols=178  Identities=20%  Similarity=0.311  Sum_probs=133.2

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC-CCCcceeeeeeeC--CCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ-DPNLVSILGVCTG--EQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~-h~niv~~~g~~~~--~~~~~lv  102 (228)
                      .++|++.+.||+|+||.||+|....   .+..||+|.++    ..+.+|+.++.+++ |+||+++++++..  ....+++
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECC---CCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            4568899999999999999998765   78899999984    67899999999997 9999999999987  4567999


Q ss_pred             EeeccccCCHHHHhhhC--------------------------Cccc---------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA--------------------------DNLT---------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~--------------------------r~l~---------------------------------  123 (228)
                      |||+ .+++|.+++...                          +||+                                 
T Consensus       112 ~e~~-~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  190 (330)
T 3nsz_A          112 FEHV-NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  190 (330)
T ss_dssp             EECC-CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSC
T ss_pred             Eecc-CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccc
Confidence            9999 999998876543                          3333                                 


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC-CChHHHHHHHHHhhhC---------C--------
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYG---------G--------  173 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~-~~~~~~~~~~~~~~~~---------~--------  173 (228)
                                  .....++.++||||||++++||++  |..||.. .+..+....+......         .        
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF--RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  268 (330)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred             cccccccChhhhcCCCcCCchhhHHHHHHHHHHHHh--CCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence                        112467899999999999999999  5577743 3333222222111000         0        


Q ss_pred             ----------Cccc--cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ----------ELQV--FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ----------~~~~--~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                .+..  ....+..++.++.+|+.+||+.||.+|||+.++++|
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                      0000  001122378999999999999999999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.94  E-value=4.8e-26  Score=189.16  Aligned_cols=183  Identities=19%  Similarity=0.248  Sum_probs=138.7

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      .+.+.+. .+|++.+.||+|+||.||++....   ++..||+|.+.        ..+.+|++++.+++|+||+++++++.
T Consensus        20 g~~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   95 (364)
T 3qyz_A           20 GQVFDVG-PRYTNLSYIGEGAYGMVCSAYDNL---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR   95 (364)
T ss_dssp             -CBCCCT-TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEEC
T ss_pred             cEecccc-ccEEEEEEeecCCCeEEEEEEECC---CCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEe
Confidence            3444443 469999999999999999998765   78899999984        55789999999999999999999986


Q ss_pred             CCC-----CCeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           95 GEQ-----PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        95 ~~~-----~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                      ...     ..+++|||+ . |+|.+++...                            +||+                  
T Consensus        96 ~~~~~~~~~~~iv~e~~-~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  173 (364)
T 3qyz_A           96 APTIEQMKDVYIVQDLM-E-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG  173 (364)
T ss_dssp             CSSTTTCCCEEEEEECC-S-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             cCCccccceEEEEEccc-C-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCc
Confidence            543     579999998 6 6898877643                            3333                  


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++|||++  |..||.+.+..+....+.......
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~  251 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS--NRPIFPGKHYLDQLNHILGILGSP  251 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHH--SSCSSCCSSGGGHHHHHHHHHCSC
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHH--CCCCCCCCChHHHHHHHHHHhCCC
Confidence                                          112347899999999999999999  669998887766555544321110


Q ss_pred             Cc--------------------cccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 EL--------------------QVFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ~~--------------------~~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..                    ....+   ....++.++.+|+.+||+.||.+|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00                    00000   124578899999999999999999999999873

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=6.2e-26  Score=188.87  Aligned_cols=182  Identities=19%  Similarity=0.236  Sum_probs=134.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ..+++. +.|++.+.||+|+||.||+|....   ++..||||.+.         ..+.+|+.+++.++|+||+++++++.
T Consensus        19 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~   94 (367)
T 1cm8_A           19 TAWEVR-AVYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT   94 (367)
T ss_dssp             SEECCB-SSEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             ceeeec-ceEEEeEEeeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEe
Confidence            445554 569999999999999999998865   78999999882         45789999999999999999999997


Q ss_pred             CCC------CCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------
Q psy796           95 GEQ------PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------  123 (228)
Q Consensus        95 ~~~------~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------  123 (228)
                      ...      ..+++|||+  +++|.+++...                            +||+                 
T Consensus        95 ~~~~~~~~~~~~lv~e~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  172 (367)
T 1cm8_A           95 PDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF  172 (367)
T ss_dssp             SCSSTTTCCCCEEEEECC--SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             cCCccccCceEEEEEecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEee
Confidence            653      359999998  48898887643                            3443                 


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC----
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE----  174 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----  174 (228)
                                               .....++.++|||||||+++||++  |..||.+.+..+....+........    
T Consensus       173 g~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~l~~i~~~~g~~~~~~~  250 (367)
T 1cm8_A          173 GLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT--GKTLFKGSDHLDQLKEIMKVTGTPPAEFV  250 (367)
T ss_dssp             TTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             ecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence                                     112568999999999999999999  6799998877666555443221100    


Q ss_pred             -------------------ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 -------------------LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 -------------------~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                         ..........++.++.+|+.+||+.||.+|||+.++++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                               000001134578899999999999999999999999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=1.5e-26  Score=190.06  Aligned_cols=180  Identities=21%  Similarity=0.392  Sum_probs=133.1

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhh--CCCCCcceeeeeeeCCC----CC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSS--LQDPNLVSILGVCTGEQ----PP   99 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~--l~h~niv~~~g~~~~~~----~~   99 (228)
                      .++|++.+.||+|+||.||+|..     .++.||+|.+.    ..+.+|++++..  ++|+||+++++++....    ..
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE-----cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            35789999999999999999987     67899999984    457788888887  78999999999998765    67


Q ss_pred             eEEEeeccccCCHHHHhhhC------------------------------------Cccc--------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA------------------------------------DNLT--------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~------------------------------------r~l~--------------------  123 (228)
                      +++|||+ ++|+|.+++...                                    +||+                    
T Consensus       116 ~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          116 WLVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             EEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeec-CCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence            9999999 999999876542                                    3333                    


Q ss_pred             ----------------------------cccC------CCCCccchHHHHHHHHHHHhcCC--------CCCCCCCCh--
Q psy796          124 ----------------------------RDRD------RYTCQSNVWSFAVTLWEILSLCR--------DKPFPHLTN--  159 (228)
Q Consensus       124 ----------------------------~~~~------~~~~~~Dv~s~Gv~l~el~~~~~--------~~p~~~~~~--  159 (228)
                                                  ....      .++.++||||||+++|||++|+.        ..||.....  
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  274 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  274 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence                                        0000      12267999999999999999522        567766432  


Q ss_pred             ---HHHHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          160 ---EQVIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       160 ---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                         ......+..    ...++..+.   ...++..+.+++.+||+.+|.+|||+.+|+++|+.+.+
T Consensus       275 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          275 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CCHHHHHHHHTT----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHH----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence               222222211    111111111   12345689999999999999999999999999999943

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.94  E-value=6.6e-27  Score=188.48  Aligned_cols=178  Identities=13%  Similarity=0.112  Sum_probs=134.9

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeee-eCCCCCeEEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVC-TGEQPPWLVM  103 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~-~~~~~~~lv~  103 (228)
                      .++|++.+.||+|+||.||+|....   +++.||+|.+.     ..+.+|+.++..++|++++..++.+ ......+++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcC---CCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            3569999999999999999998755   78999999874     5689999999999988877666555 4455679999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+  +++|.+++...                              +||+                              
T Consensus        85 e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           85 ELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             ECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             Eec--CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            998  58999988632                              3333                              


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCcc
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~  176 (228)
                                              ..+..++.++||||||+++|||++  |..||.+.+..   .....+........  
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~--  238 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTP--  238 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHh--CCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence                                    112245778999999999999999  66898764432   22233222211000  


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....+..++.++.+++.+||+.+|.+|||+.+|++.|+.+
T Consensus       239 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          239 -IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             -HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             -hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence             0011366889999999999999999999999999999999

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.94  E-value=7.3e-27  Score=192.52  Aligned_cols=177  Identities=14%  Similarity=0.286  Sum_probs=135.6

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------------------HHHHHHHHHHhhCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------------------GDSLREIRFLSSLQD   83 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------------------~~~~~e~~~l~~l~h   83 (228)
                      +..++|++.+.||+|+||.||+|..     ++..||+|.+.                        ..+.+|+.++.+++|
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  102 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN  102 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence            3456899999999999999999987     68999999883                        568899999999999


Q ss_pred             CCcceeeeeeeCCCCCeEEEeeccccCCHHHH------hhh--C------------------------------Cccc--
Q psy796           84 PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH------LNS--A------------------------------DNLT--  123 (228)
Q Consensus        84 ~niv~~~g~~~~~~~~~lv~e~~~~~g~L~~~------l~~--~------------------------------r~l~--  123 (228)
                      +||+++++++...+..+++|||+ ++|+|.++      +..  .                              +||+  
T Consensus       103 ~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~  181 (348)
T 2pml_X          103 EYCLTCEGIITNYDEVYIIYEYM-ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPS  181 (348)
T ss_dssp             TTBCCCSEEEESSSEEEEEEECC-TTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGG
T ss_pred             CCcceEEEEEeeCCeEEEEEecc-CCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChH
Confidence            99999999999998999999999 98898877      433  1                              2332  


Q ss_pred             ----------------------------------------cccC-CCCC-ccchHHHHHHHHHHHhcCCCCCCCCCCh-H
Q psy796          124 ----------------------------------------RDRD-RYTC-QSNVWSFAVTLWEILSLCRDKPFPHLTN-E  160 (228)
Q Consensus       124 ----------------------------------------~~~~-~~~~-~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~  160 (228)
                                                              .... .++. ++||||||++++||++  +..||..... .
T Consensus       182 Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~  259 (348)
T 2pml_X          182 NILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY--NVVPFSLKISLV  259 (348)
T ss_dssp             GEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHH--SSCSSCCSSCSH
T ss_pred             hEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHh--CCCCCCCCCcHH
Confidence                                                    1112 3444 9999999999999999  6689987766 5


Q ss_pred             HHHHHHHHhhhCCCcc-cc----------CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQ-VF----------LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      +....+.......... ..          ......++.++.+++.+||+.+|.+|||+.++++
T Consensus       260 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          260 ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            5555554321100000 00          0001568899999999999999999999999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=2.5e-26  Score=186.81  Aligned_cols=176  Identities=19%  Similarity=0.218  Sum_probs=130.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeC--------
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTG--------   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~--------   95 (228)
                      ++|++.+.||+|+||.||+|....   .++.||+|.+.       ..+.+|+.++++++|+||+++++++..        
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDND---CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETT---TTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECC---CCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            568999999999999999999865   68999999873       557899999999999999999998742        


Q ss_pred             ------CCCCeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           96 ------EQPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        96 ------~~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                            ....+++|||+ + |+|.+++...                            +||+                  
T Consensus        88 ~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYM-E-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             ---CCSCSEEEEEEECC-S-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             cccccccCceeEEeecc-C-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence                  34578999999 7 6999887653                            2333                  


Q ss_pred             -------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 -------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                     .....++.++||||||+++|||++  |..||.+.+..+....+......
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~  243 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT--GKTLFAGAHELEQMQLILESIPV  243 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHSCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCC
Confidence                                           112457888999999999999999  67999888776655544432110


Q ss_pred             CC----------------------ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 GE----------------------LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 ~~----------------------~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..                      .......+..++.++.+++.+||+.||.+|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            00                      000000124688999999999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=1e-26  Score=193.23  Aligned_cols=186  Identities=11%  Similarity=0.129  Sum_probs=132.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch---HH---------------HHHHHHHHhhCCCCCcc
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR---GD---------------SLREIRFLSSLQDPNLV   87 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~---~~---------------~~~e~~~l~~l~h~niv   87 (228)
                      +..++|++.+.||+|+||.||+|.+....  ..+..||+|.+.   ..               ..+|+..+..++|+||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            55678999999999999999999886421  125789999973   11               23445556677899999


Q ss_pred             eeeeeeeCC----CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------
Q psy796           88 SILGVCTGE----QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------  123 (228)
Q Consensus        88 ~~~g~~~~~----~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------  123 (228)
                      ++++++...    ...+++|||+  +++|.+++...                              |||+          
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~--g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE--EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             eEEeeeeeccCCcceEEEEEeCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            999998764    3479999998  58999988643                              3443          


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-  159 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-  159 (228)
                                                                 +.+..++.++||||||+++|||++  |..||.+... 
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~Pf~~~~~~  267 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT--GHLPWEDNLKD  267 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SCCTTGGGTTC
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHh--CCCCccccccC
Confidence                                                       122346789999999999999999  6799985332 


Q ss_pred             HHHHHHHHHhhhCCCcc--ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          160 EQVIQNAEHMYYGGELQ--VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .................  .....+..++.++.+++..||+.+|.+||++.+|++.|+.+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            22222121111100000  00112357889999999999999999999999999999988

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.94  E-value=1.5e-26  Score=192.76  Aligned_cols=177  Identities=17%  Similarity=0.202  Sum_probs=133.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC---
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ---   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~---   97 (228)
                      .++|++.+.||+|+||.||+|....   .+..||||.+.         ..+.+|+.+++.++|+||+++++++....   
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             hhheeEeeeeEecCCEEEEEEEECC---CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            3568999999999999999998765   68899999983         45789999999999999999999997654   


Q ss_pred             ---CCeEEEeeccccCCHHHHhhhC---------------------------Cccc------------------------
Q psy796           98 ---PPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------------  123 (228)
Q Consensus        98 ---~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------------  123 (228)
                         ..+++|||+ + |+|.+++...                           +||+                        
T Consensus       101 ~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          101 EFQDVYIVMELM-D-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             TCCEEEEEEECC-S-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             cccceEEEEEcC-C-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence               569999999 7 5787766432                           3444                        


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc---------
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL---------  175 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------  175 (228)
                                         ..+..++.++||||||+++|||++  |..||.+.+..+....+.........         
T Consensus       179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK--GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence                               234467899999999999999999  66999988776655544332110000         


Q ss_pred             -------cccC------------CCCC------CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -------QVFL------------PKPS------LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -------~~~~------------~~~~------~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                             .+..            ..|.      ..+.++.+|+.+||+.||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                   0000            0011      015679999999999999999999999974

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=6.3e-27  Score=188.48  Aligned_cols=177  Identities=13%  Similarity=0.114  Sum_probs=132.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeee-eCCCCCeEEEe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVC-TGEQPPWLVME  104 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~-~~~~~~~lv~e  104 (228)
                      ++|++.+.||+|+||.||+|....   .+..||+|.+.     ..+.+|+.++..++|++++..++.+ ...+..+++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcC---CCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            568999999999999999998765   78999999863     5588999999999988877666655 45566799999


Q ss_pred             eccccCCHHHHhhhC------------------------------Cccc-------------------------------
Q psy796          105 YPAQLGDLVQHLNSA------------------------------DNLT-------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~------------------------------r~l~-------------------------------  123 (228)
                      |+  +++|.+++...                              +||+                               
T Consensus        86 ~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           86 LL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             CC--CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             cc--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            98  58999988632                              3333                               


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCccc
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQV  177 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~  177 (228)
                                             ..+..++.++||||||+++|||++  |..||.+.+..   .....+........   
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~---  238 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTP---  238 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhc--CCCCCcccchhhhhhhhhhhhcccccch---
Confidence                                   112245778999999999999999  67899775432   22222222111000   


Q ss_pred             cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       178 ~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .......++.++.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            0011256789999999999999999999999999999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.94  E-value=5e-26  Score=189.62  Aligned_cols=182  Identities=20%  Similarity=0.229  Sum_probs=139.9

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ..|+++ ++|.+.+.||+|+||.||+|....   ++..||+|.+.         ..+.+|+.+++.++|+||+++++++.
T Consensus        36 ~~~~l~-~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  111 (371)
T 4exu_A           36 TAWELP-KTYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT  111 (371)
T ss_dssp             EEEEEE-TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ceeccc-ccEEEEeEEecCCCeEEEEEEECC---CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhhee
Confidence            445555 468999999999999999998865   78999999884         45789999999999999999999998


Q ss_pred             CCCCC------eEEEeeccccCCHHHHhhhC---------------------------Cccc------------------
Q psy796           95 GEQPP------WLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------  123 (228)
Q Consensus        95 ~~~~~------~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------  123 (228)
                      ..+..      +++|||+ . ++|.+++...                           +||+                  
T Consensus       112 ~~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFM-Q-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             SCSSSTTCCCCEEEEECC-C-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             ccCCcccceeEEEEEccc-c-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence            76654      9999998 6 7887766432                           3333                  


Q ss_pred             -----------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----
Q psy796          124 -----------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----  175 (228)
Q Consensus       124 -----------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----  175 (228)
                                             . ....++.++||||||++++||++  |..||.+.+..+....+.........    
T Consensus       190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  267 (371)
T 4exu_A          190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT--GKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  267 (371)
T ss_dssp             CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence                                   1 22568899999999999999999  67999988776655554332111000    


Q ss_pred             -------------------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 -------------------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 -------------------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                         ......+..++.++.+|+.+||+.||.+|||+.+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                               00000124578999999999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=3.3e-26  Score=189.08  Aligned_cols=175  Identities=18%  Similarity=0.281  Sum_probs=134.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE-----   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----   96 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.+.         ..+.+|+.++..++|+||+++++++...     
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETT---TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred             cceeEEEEEecCCCcEEEEEEECC---CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence            568999999999999999999865   78899999873         4578999999999999999999998764     


Q ss_pred             ---CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           97 ---QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        97 ---~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                         +..++||||+ . |+|.+.+...                              +||+                    
T Consensus        94 ~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           94 RCKGSIYLVFDFC-E-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             ---CEEEEEEECC-S-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             cCCceEEEEEecc-C-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence               3478999999 7 5776665432                              3333                    


Q ss_pred             ----------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCC
Q psy796          124 ----------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE  174 (228)
Q Consensus       124 ----------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  174 (228)
                                                  . ....++.++||||||++++||++  |..||.+.+.......+........
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLALISQLCGSIT  249 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCC
Confidence                                        1 12347899999999999999999  6799998887776666655432111


Q ss_pred             ccccCCCCC-------------------------CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          175 LQVFLPKPS-------------------------LCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       175 ~~~~~~~~~-------------------------~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .. ..+...                         ..++++.+|+.+||+.||.+|||+.+++++
T Consensus       250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PE-VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TT-TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hh-hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00 000000                         025679999999999999999999999974

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.94  E-value=2.5e-26  Score=189.94  Aligned_cols=186  Identities=11%  Similarity=0.069  Sum_probs=136.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-----CceeEEeecch--HHHHHHHHHHhhCCCCCcce------------
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-----DTEKVAVRTCR--GDSLREIRFLSSLQDPNLVS------------   88 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-----~~~~vavK~~~--~~~~~e~~~l~~l~h~niv~------------   88 (228)
                      ...++|++.+.||+|+||.||+|.......     .+..||+|.+.  ..+.+|++++.+++|+||++            
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           39 KSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             TTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             ccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            346789999999999999999998864111     26899999996  45899999999999999988            


Q ss_pred             ---eeeeeeC-CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------
Q psy796           89 ---ILGVCTG-EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------  123 (228)
Q Consensus        89 ---~~g~~~~-~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------  123 (228)
                         +++++.. ....+++|||+  +++|.+++...                               +||+          
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC--CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             ccchhhccccCCcEEEEEecCC--CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence               5566654 55779999997  59999998753                               2332          


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC--
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT--  158 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~--  158 (228)
                                                                 ..+..++.++||||||+++|||++  |..||....  
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~  274 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY--GFLPWTNCLPN  274 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SCCTTGGGTTC
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh--CCCCcccCCcC
Confidence                                                       122356789999999999999999  668998754  


Q ss_pred             hHHHHHHHHHhhhCCCc-cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          159 NEQVIQNAEHMYYGGEL-QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ................. .........++.++.+++.+||+.+|.+|||+.+|++.|+.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            22333322222111100 000011135689999999999999999999999999999999

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=1.2e-25  Score=185.83  Aligned_cols=181  Identities=20%  Similarity=0.225  Sum_probs=137.6

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .++++ ++|.+.+.||+|+||.||+|....   ++..||||.+.         ..+.+|+.++..++|+||+++++++..
T Consensus        19 ~~~l~-~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   94 (353)
T 3coi_A           19 AWELP-KTYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP   94 (353)
T ss_dssp             EEEEE-TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred             ccccC-ceEEEeeeEecCCCeEEEEEEECC---CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEec
Confidence            44444 458999999999999999998865   78999999983         457889999999999999999999977


Q ss_pred             CCC------CeEEEeeccccCCHHHHhhhC---------------------------Cccc-------------------
Q psy796           96 EQP------PWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-------------------  123 (228)
Q Consensus        96 ~~~------~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-------------------  123 (228)
                      .+.      .+++|||+ . ++|.+++...                           +||+                   
T Consensus        95 ~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  172 (353)
T 3coi_A           95 ASSLRNFYDFYLVMPFM-Q-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL  172 (353)
T ss_dssp             CSSGGGCCCCEEEEECC-S-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred             ccccccceeEEEEeccc-c-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence            653      49999998 6 6777655422                           3333                   


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-------
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-------  173 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------  173 (228)
                                             .....++.++||||||++++||++  |..||.+.+..+....+.......       
T Consensus       173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT--GKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH--SSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred             ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence                                   112567899999999999999999  679998887766555443321100       


Q ss_pred             ----------------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ----------------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ----------------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                      ...........++.++.+++.+||+.||.+|||+.+++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                            0000011234678999999999999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.94  E-value=1.5e-25  Score=184.93  Aligned_cols=177  Identities=19%  Similarity=0.241  Sum_probs=135.6

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE-----   96 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----   96 (228)
                      .++|.+.+.||+|+||.||+|....   .+..||||.++        ..+.+|+.++++++|+||+++++++...     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   86 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF   86 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECC---CCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence            3569999999999999999998865   68999999883        4567999999999999999999988654     


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-------------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------  123 (228)
                      ...+++|||+ . |+|.+++...                            +||+                         
T Consensus        87 ~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (353)
T 2b9h_A           87 NEVYIIQELM-Q-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE  164 (353)
T ss_dssp             CCEEEEECCC-S-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             ceEEEEEecc-C-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence            5679999998 7 7898877543                            3333                         


Q ss_pred             ------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC
Q psy796          124 ------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG  173 (228)
Q Consensus       124 ------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  173 (228)
                                                    .....++.++||||||+++|||++  |..||.+.+..+....+.......
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~  242 (353)
T 2b9h_A          165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL--RRPIFPGRDYRHQLLLIFGIIGTP  242 (353)
T ss_dssp             ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCC
Confidence                                          012457788999999999999999  679998887665544443321110


Q ss_pred             Ccc------------------ccCC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 ELQ------------------VFLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ~~~------------------~~~~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...                  +..+      ....++.++.+++.+||+.||.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            000                  0000      124678899999999999999999999999873

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.94  E-value=6.4e-26  Score=192.46  Aligned_cols=177  Identities=19%  Similarity=0.230  Sum_probs=136.1

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhC------CCCCcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSL------QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l------~h~niv~~~g~~~~~~   97 (228)
                      ..+|++.+.||+|+||.||+|....   .+..||||.++      ..+.+|+.++..+      +|+||+++++++...+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~---~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHK---VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETT---TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             cCcEEEEEEcccCccEEEEEEEECC---CCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            3468999999999999999998865   68999999984      4567788888766      5779999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ . ++|.+++...                               |||+                       
T Consensus       173 ~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          173 HICMTFELL-S-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             EEEEEECCC-C-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             eEEEEEecc-C-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence            899999998 6 7998887653                               3333                       


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc-------
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ-------  176 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------  176 (228)
                                          +.+..++.++|||||||++|||++  |.+||.+.+..+....+..........       
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--G~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~  328 (429)
T 3kvw_A          251 YEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT--GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR  328 (429)
T ss_dssp             ETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTT
T ss_pred             ecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhh
Confidence                                234468899999999999999999  679998888776655544321100000       


Q ss_pred             ----------c-------------------------c-CC--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          177 ----------V-------------------------F-LP--------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       177 ----------~-------------------------~-~~--------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                                +                         . .+        .+...+.++.+|+.+||+.||.+|||+.++++
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                      0                         0 00        01234678999999999999999999999997


Q ss_pred             H
Q psy796          213 F  213 (228)
Q Consensus       213 ~  213 (228)
                      |
T Consensus       409 H  409 (429)
T 3kvw_A          409 H  409 (429)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=3.7e-26  Score=189.32  Aligned_cols=182  Identities=18%  Similarity=0.247  Sum_probs=138.6

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC-----CCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ-----DPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~-----h~niv~~~g~~   93 (228)
                      .-.+-.++|++.+.||+|+||.||+|....   .+..||+|.++      ..+.+|+.++..+.     |+||+++++++
T Consensus        29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~  105 (360)
T 3llt_A           29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHID---NKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF  105 (360)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred             cceEecCEEEEEEEEcccCCeEEEEEEECC---CCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence            334445679999999999999999999865   78899999984      45678999999886     99999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------  123 (228)
                      ...+..+++|||+  +++|.+++...                               +||+                   
T Consensus       106 ~~~~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          106 MYYDHMCLIFEPL--GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             EETTEEEEEECCC--CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             eECCeeEEEEcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchh
Confidence            9888899999998  58999988643                               2322                   


Q ss_pred             -----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCC
Q psy796          124 -----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH  156 (228)
Q Consensus       124 -----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~  156 (228)
                                                                     ..+..++.++|||||||++|||++  |..||..
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~  261 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT--GSLLFRT  261 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCSCCC
T ss_pred             cccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH--CCCCCCC
Confidence                                                           223457899999999999999999  6799988


Q ss_pred             CChHHHHHHHHHhhhCCCcc------------------ccCCCC--------------------CCCcHHHHHHHHHhhc
Q psy796          157 LTNEQVIQNAEHMYYGGELQ------------------VFLPKP--------------------SLCPRDIYDLMCDCWK  198 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~--------------------~~~~~~l~~li~~c~~  198 (228)
                      .+..+....+..........                  .....|                    ...++++.+|+.+||+
T Consensus       262 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  341 (360)
T 3llt_A          262 HEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ  341 (360)
T ss_dssp             SSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence            87776655554432110000                  000001                    1123678899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy796          199 RDQTMRPTFKQIYSF  213 (228)
Q Consensus       199 ~~p~~Rps~~~v~~~  213 (228)
                      .||.+|||+.+++++
T Consensus       342 ~dP~~Rpta~elL~h  356 (360)
T 3llt_A          342 IDPTLRPSPAELLKH  356 (360)
T ss_dssp             SSGGGSCCHHHHTTS
T ss_pred             CChhhCCCHHHHhcC
Confidence            999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.94  E-value=8.6e-26  Score=188.01  Aligned_cols=182  Identities=19%  Similarity=0.237  Sum_probs=132.4

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ..|+++ ++|++.+.||+|+||.||+|....   .+..||||.+.         ..+.+|+.+++.++|+||+++++++.
T Consensus        23 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   98 (367)
T 2fst_X           23 TIWEVP-ERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   98 (367)
T ss_dssp             EEEEEE-TTEEEEEECC----CCEEEEEETT---TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             cccCCC-CceEEeeEEeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            456665 559999999999999999998765   78999999983         45779999999999999999999986


Q ss_pred             CC------CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------
Q psy796           95 GE------QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------  123 (228)
Q Consensus        95 ~~------~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------  123 (228)
                      ..      ...++++|++ . ++|.+++...                            +||+                 
T Consensus        99 ~~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DF  176 (367)
T 2fst_X           99 PARSLEEFNDVYLVTHLM-G-ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF  176 (367)
T ss_dssp             SCSSGGGCCCCEEEEECC-C-EECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred             cCCccccCCeEEEEeccc-C-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeec
Confidence            54      4579999997 4 7787766432                            3443                 


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc--
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ--  176 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--  176 (228)
                                               .....++.++|||||||+++||++  |..||.+.+..+....+..........  
T Consensus       177 G~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  254 (367)
T 2fst_X          177 GLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT--GRTLFPGTDHIDQLKLILRLVGTPGAELL  254 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             cccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence                                     122568899999999999999999  679999888776655554422110000  


Q ss_pred             ---------------ccCC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ---------------VFLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ---------------~~~~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                     +..+      ....++.++.+|+.+||+.||.+|||+.++++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                           0000      013567889999999999999999999999874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.94  E-value=9.5e-26  Score=192.79  Aligned_cols=89  Identities=19%  Similarity=0.304  Sum_probs=65.5

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+.+. ++|++.+.||+|+||.||+|....   .+..||||.+.         ..+.+|+.+|..++|+||+++++++..
T Consensus        48 ~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  123 (458)
T 3rp9_A           48 DWQIP-DRYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIP  123 (458)
T ss_dssp             SCCSC-TTEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred             cCccC-CCeEEeeEeeecCCeEEEEEEECC---CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence            34443 569999999999999999998875   78899999873         457899999999999999999999854


Q ss_pred             C-----CCCeEEEeeccccCCHHHHhhhC
Q psy796           96 E-----QPPWLVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus        96 ~-----~~~~lv~e~~~~~g~L~~~l~~~  119 (228)
                      .     ...+++|||+ . |+|.+++...
T Consensus       124 ~~~~~~~~~~lv~e~~-~-~~L~~~~~~~  150 (458)
T 3rp9_A          124 KDVEKFDELYVVLEIA-D-SDFKKLFRTP  150 (458)
T ss_dssp             SCTTTCCCEEEEECCC-S-EEHHHHHHSS
T ss_pred             CCcccCceEEEEEecc-c-cchhhhcccC
Confidence            3     4679999997 5 7888877654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.93  E-value=1.1e-25  Score=191.06  Aligned_cols=91  Identities=18%  Similarity=0.325  Sum_probs=77.1

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      .+.+.+. ++|++.+.||+|+||.||+|....   .+..||||.++         ..+.+|+.+|+.++|+||+++++++
T Consensus        19 ~~~~~i~-~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~   94 (432)
T 3n9x_A           19 IKNVHVP-DNYIIKHLIGRGSYGYVYLAYDKN---TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLI   94 (432)
T ss_dssp             GGGCCCC-TTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCcceec-CCEEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence            3455554 459999999999999999999875   78999999884         4578999999999999999999999


Q ss_pred             eCC-----CCCeEEEeeccccCCHHHHhhhC
Q psy796           94 TGE-----QPPWLVMEYPAQLGDLVQHLNSA  119 (228)
Q Consensus        94 ~~~-----~~~~lv~e~~~~~g~L~~~l~~~  119 (228)
                      ...     ...++||||+ . |+|.+++...
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~  123 (432)
T 3n9x_A           95 IPDDLLKFDELYIVLEIA-D-SDLKKLFKTP  123 (432)
T ss_dssp             CCSCTTTCCCEEEEEECC-S-EEHHHHHHSS
T ss_pred             ecCCCCcCCeEEEEEecC-C-cCHHHHHhcc
Confidence            765     4679999998 6 7999888654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.93  E-value=2.1e-27  Score=198.25  Aligned_cols=171  Identities=13%  Similarity=0.104  Sum_probs=127.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHH---HHHhhCCCCCcceee----
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREI---RFLSSLQDPNLVSIL----   90 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~---~~l~~l~h~niv~~~----   90 (228)
                      .+.++|++.+.||+|+||.||+|....   +++.||||.+.          ..+.+|+   +.+++++||||++++    
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~  146 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  146 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-C---CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECC---CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhh
Confidence            345678899999999999999999865   68999999983          5578999   455566899999998    


Q ss_pred             ---eeeeCCC-----------------CCeEEEeeccccCCHHHHhhhC-------------------------------
Q psy796           91 ---GVCTGEQ-----------------PPWLVMEYPAQLGDLVQHLNSA-------------------------------  119 (228)
Q Consensus        91 ---g~~~~~~-----------------~~~lv~e~~~~~g~L~~~l~~~-------------------------------  119 (228)
                         +++...+                 ..+++|||+ . |+|.+++...                               
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-Q-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECC-S-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-C-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence               5554432                 278999998 6 7999988641                               


Q ss_pred             -----Cccc----------------------------------------cccC-----------CCCCccchHHHHHHHH
Q psy796          120 -----DNLT----------------------------------------RDRD-----------RYTCQSNVWSFAVTLW  143 (228)
Q Consensus       120 -----r~l~----------------------------------------~~~~-----------~~~~~~Dv~s~Gv~l~  143 (228)
                           +||+                                        ....           .++.++|||||||++|
T Consensus       225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence                 4444                                        1112           6889999999999999


Q ss_pred             HHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH--HHHHH
Q psy796          144 EILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKRS  217 (228)
Q Consensus       144 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~--~l~~~  217 (228)
                      ||++  |..||.+.+.......            ....+..++.++.+++.+||+.||.+|||+.++++  .++.+
T Consensus       305 ellt--g~~Pf~~~~~~~~~~~------------~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          305 WIWC--ADLPITKDAALGGSEW------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHH--SSCCC------CCSGG------------GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHH--CCCCCcccccccchhh------------hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            9999  6789876443322111            12234678999999999999999999999999996  44444

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.93  E-value=6e-26  Score=188.16  Aligned_cols=177  Identities=18%  Similarity=0.204  Sum_probs=135.7

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------------------HHHHHHHHHHhhCCCCCcceee
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------------GDSLREIRFLSSLQDPNLVSIL   90 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------------~~~~~e~~~l~~l~h~niv~~~   90 (228)
                      -.++|.+.+.||+|+||.||+|...    .+..||||.+.                  ..+.+|+.++.+++|+||++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   95 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDS----EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR   95 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECT----TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             hccceEEeEEeccCCCEEEEEEECC----CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence            4567999999999999999999864    68899999872                  5688999999999999999999


Q ss_pred             eeeeCC-----CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------
Q psy796           91 GVCTGE-----QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------  123 (228)
Q Consensus        91 g~~~~~-----~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------  123 (228)
                      +++...     ...+++|||+ . |+|.+++...                              +||+            
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~  173 (362)
T 3pg1_A           96 DIFVHFEEPAMHKLYLVTELM-R-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDI  173 (362)
T ss_dssp             EEEEECCTTTCCEEEEEEECC-S-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             eeEEeccCCCcceEEEEEccC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCE
Confidence            998542     2469999999 7 7888877543                              3333            


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                      .....++.++||||||+++|||++  |..||.+.+..+....+.....
T Consensus       174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~  251 (362)
T 3pg1_A          174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN--RKALFRGSTFYNQLNKIVEVVG  251 (362)
T ss_dssp             EECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHC
T ss_pred             EEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcC
Confidence                                            122568899999999999999999  6799988877666555543221


Q ss_pred             CCCcc------------------ccC------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQ------------------VFL------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~------------------~~~------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .....                  ...      ..+..++..+.+++.+||+.+|.+|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            11000                  000      0124567889999999999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.93  E-value=1.7e-25  Score=182.66  Aligned_cols=177  Identities=20%  Similarity=0.237  Sum_probs=135.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC---CCCCcceeeeeee----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL---QDPNLVSILGVCT----   94 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l---~h~niv~~~g~~~----   94 (228)
                      ++|++.+.||+|+||.||++.....  .++.||+|.++         ..+.+|+.+++.+   .|+||+++++++.    
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             hceeeeeeecccccEEEEEEEecCC--CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            5689999999999999999987421  67899999884         3467888877766   8999999999986    


Q ss_pred             -CCCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------
Q psy796           95 -GEQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------  123 (228)
Q Consensus        95 -~~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------  123 (228)
                       .....+++|||+ . |+|.+++...                               +||+                   
T Consensus        89 ~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~  166 (326)
T 1blx_A           89 DRETKLTLVFEHV-D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL  166 (326)
T ss_dssp             SSEEEEEEEEECC-S-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             CCCceEEEEEecC-C-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence             445679999999 7 7999988653                               2222                   


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----  175 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----  175 (228)
                                              .....++.++||||||+++|||++  |..||.+.+.......+.........    
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence                                    223457899999999999999999  67999888877666655443211000    


Q ss_pred             ---------------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ---------------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ---------------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                     ......+..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                           00001234578999999999999999999999999863

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=8.8e-26  Score=182.13  Aligned_cols=169  Identities=16%  Similarity=0.271  Sum_probs=128.0

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC---------
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE---------   96 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~---------   96 (228)
                      +|++.+.||+|+||.||+|....   ++..||+|.++      ..+.+|+.++.+++|+||+++++++...         
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNAL---DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cchhhheeccCCcEEEEEEEEcC---CCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            57889999999999999998765   78899999984      4578999999999999999999987542         


Q ss_pred             ----CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------
Q psy796           97 ----QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------  123 (228)
Q Consensus        97 ----~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------  123 (228)
                          +..+++|||+ ++|+|.+++...                              +||+                   
T Consensus        84 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           84 VKKKSTLFIQMEYC-ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             --CEEEEEEEEECC-CSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cccCCceEEEEecC-CCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence                3568999999 999999998643                              2222                   


Q ss_pred             ---c-------------------------------------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCC-CChHHH
Q psy796          124 ---R-------------------------------------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQV  162 (228)
Q Consensus       124 ---~-------------------------------------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~-~~~~~~  162 (228)
                         .                                     ....++.++||||||+++|||++     ||.. .+..+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-----p~~~~~~~~~~  237 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-----PFSTGMERVNI  237 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-----CCSSHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-----ccCCchhHHHH
Confidence               0                                     12357889999999999999997     3332 122233


Q ss_pred             HHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          163 IQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...+....    .......+...+..+.+++.+||+.||.+|||+.+++++
T Consensus       238 ~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          238 LKKLRSVS----IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHSTT----CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHhccccc----cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            33332211    111112345567889999999999999999999999873

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=1.1e-25  Score=182.98  Aligned_cols=176  Identities=19%  Similarity=0.331  Sum_probs=138.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCC--CCCcceeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQ--DPNLVSILGV   92 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~--h~niv~~~g~   92 (228)
                      +...+..++|++.+.||+|+||.||++...    .+..||+|.+.         ..+.+|+.++.+++  |+||++++++
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcC----CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            567778888999999999999999999874    57889999883         55789999999996  5999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------  123 (228)
                      +...+..+++||+  .+++|.+++...                             +||+                    
T Consensus        97 ~~~~~~~~lv~e~--~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~  174 (313)
T 3cek_A           97 EITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIAN  174 (313)
T ss_dssp             EECSSEEEEEECC--CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSC
T ss_pred             eecCCEEEEEEec--CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccc
Confidence            9998889999994  678999988654                             2222                    


Q ss_pred             -------------------------cc-----------cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHH
Q psy796          124 -------------------------RD-----------RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNA  166 (228)
Q Consensus       124 -------------------------~~-----------~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~  166 (228)
                                               ..           ...++.++||||||+++|||++  |..||...... .....+
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~  252 (313)
T 3cek_A          175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY--GKTPFQQIINQISKLHAI  252 (313)
T ss_dssp             C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHH--SSCTTTTCCSHHHHHHHH
T ss_pred             cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHh--CCCchhhHHHHHHHHHHH
Confidence                                     00           1357779999999999999999  56888765433 222222


Q ss_pred             HHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ...   .   .....+..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       253 ~~~---~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          253 IDP---N---HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HCT---T---SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             Hhc---c---cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            211   1   1234566678999999999999999999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=1.2e-25  Score=182.96  Aligned_cols=180  Identities=18%  Similarity=0.270  Sum_probs=127.7

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      ..+.+.+.-++|++.+.||+|+||.||+|....   +++.||+|.+.         ..+.++..++..++|+||++++++
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   92 (318)
T 2dyl_A           16 GGQRYQAEINDLENLGEMGSGTCGQVWKMRFRK---TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT   92 (318)
T ss_dssp             SSSEEECCGGGEEEEEEC------CEEEEEETT---TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             cchhhhhhhccccccceeeecCCeeEEEEEEec---CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEE
Confidence            446788888899999999999999999999865   68899999984         123344456778899999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhh-C------------------------------Cccc------------------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNS-A------------------------------DNLT------------------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~-~------------------------------r~l~------------------  123 (228)
                      +...+..+++|||+ . +.+..+... .                              +||+                  
T Consensus        93 ~~~~~~~~lv~e~~-~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg  170 (318)
T 2dyl_A           93 FITNTDVFIAMELM-G-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG  170 (318)
T ss_dssp             EECSSEEEEEECCC-S-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EecCCcEEEEEecc-C-CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECC
Confidence            99988899999998 4 444333221 0                              3333                  


Q ss_pred             -------------------------c-----ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCC-hHHHHHHHHHhhhC
Q psy796          124 -------------------------R-----DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT-NEQVIQNAEHMYYG  172 (228)
Q Consensus       124 -------------------------~-----~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~  172 (228)
                                               .     ....++.++||||||+++|||++  +..||.... ..+....+....  
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~--  246 (318)
T 2dyl_A          171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT--GQFPYKNCKTDFEVLTKVLQEE--  246 (318)
T ss_dssp             TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHH--SSCTTTTCCSHHHHHHHHHHSC--
T ss_pred             CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHh--CCCCCCCCCccHHHHHHHhccC--
Confidence                                     1     24457789999999999999999  568987743 334444443321  


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         .+..+....++.++.+++.+||+.+|.+|||+.+++++
T Consensus       247 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          247 ---PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             ---CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ---CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence               11233345688999999999999999999999999873

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.93  E-value=7.7e-26  Score=191.48  Aligned_cols=176  Identities=17%  Similarity=0.177  Sum_probs=130.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCC----C--CCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGE----Q--PPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~----~--~~~l  101 (228)
                      .+|++.+.||+|+||.||+|....   .+..||||.+.   ....+|+++++.++|+||+++++++...    .  ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECC---CCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            358889999999999999999865   68999999884   3356899999999999999999988532    1  3579


Q ss_pred             EEeeccccCCHHHHhhh-----------------------------C----Cccc-------------------------
Q psy796          102 VMEYPAQLGDLVQHLNS-----------------------------A----DNLT-------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~-----------------------------~----r~l~-------------------------  123 (228)
                      +|||+ + +++.+.+..                             .    |||+                         
T Consensus       131 v~e~~-~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          131 VLDYV-P-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EEECC-C-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             ehhcc-c-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            99999 7 455544321                             1    4444                         


Q ss_pred             -------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC----------
Q psy796          124 -------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG----------  173 (228)
Q Consensus       124 -------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------  173 (228)
                                         + ....++.++|||||||++|||++  |..||.+.+..+....+.......          
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~--G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~  286 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL--GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP  286 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence                               1 22368899999999999999999  679999887765554443321100          


Q ss_pred             Cc-cccCC----------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          174 EL-QVFLP----------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       174 ~~-~~~~~----------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .. ...++          .+..++.++.+|+.+||+.||.+|||+.++++|
T Consensus       287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            00 00111          134568899999999999999999999999863

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.93  E-value=2.7e-26  Score=186.77  Aligned_cols=167  Identities=19%  Similarity=0.215  Sum_probs=124.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++.+.||+|+||.||+|....   +++.||||.+.         ....+|+..+.++ +|+||+++++++......+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKE---DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT---TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECC---CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            568889999999999999999875   68999999873         2344555555544 8999999999999988999


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------Cccc---------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------------  123 (228)
                      ++|||+ . ++|.+++...                              +||+                           
T Consensus       134 lv~e~~-~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          134 LQTELC-G-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EEEECC-C-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             EEEecc-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence            999998 5 7888876542                              3443                           


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     ...+.++.++||||||+++|||++|. ..|+. .   .....+....    .  ....+..++.+
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~-~~~~~-~---~~~~~~~~~~----~--~~~~~~~~~~~  280 (311)
T 3p1a_A          212 AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNM-ELPHG-G---EGWQQLRQGY----L--PPEFTAGLSSE  280 (311)
T ss_dssp             ---CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTC-CCCSS-H---HHHHHHTTTC----C--CHHHHTTSCHH
T ss_pred             CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCC-CCCCC-c---cHHHHHhccC----C--CcccccCCCHH
Confidence                           11235788999999999999999952 34433 1   2222222211    0  11124568899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+++.+||+.+|++|||+.+++++
T Consensus       281 l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          281 LRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHhC
Confidence            9999999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.93  E-value=7.6e-26  Score=194.41  Aligned_cols=178  Identities=15%  Similarity=0.146  Sum_probs=135.6

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCC-CCcceeeeeeeCCCCCeEEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQD-PNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h-~niv~~~g~~~~~~~~~lv~  103 (228)
                      .++|++.+.||+|+||.||+|....   .+..||||+++     ..+.+|++++..+.| +++..+..+.......+++|
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETT---TCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECC---CCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            3568999999999999999998765   78899999874     558899999999976 55556666666677789999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+  +++|.+++...                              +||+                              
T Consensus        83 e~~--g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           83 DLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             ECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             ECC--CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            998  59999988632                              3443                              


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCCcc
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~  176 (228)
                                              +.+..++.++||||||+++|||++  |..||.+....   +....+........  
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~--  236 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQGLKAGTKKQKYEKISEKKVATS--  236 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCCSSHHHHHHHHHHHHHHSC--
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh--CCCCCccccchhHHHHHHHHhhcccccc--
Confidence                                    122345778999999999999999  67999876543   22333322211100  


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                       ....+..++.++.+++..||+.+|.+||++.+|++.|+.+
T Consensus       237 -~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          237 -IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             -HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             -HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence             0111356789999999999999999999999999999998

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=6.6e-26  Score=184.22  Aligned_cols=171  Identities=19%  Similarity=0.279  Sum_probs=124.6

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhC----CCCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSL----QDPN   85 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l----~h~n   85 (228)
                      .+..+.-.++|++.+.||+|+||.||+|....   ++..||+|.++             ..+.+|+.++.++    +|+|
T Consensus        23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~   99 (312)
T 2iwi_A           23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLT---DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG   99 (312)
T ss_dssp             ----------CEEEEEEEEETTEEEEEEECTT---TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSS
T ss_pred             ccchhhhhhceEEeeEEEcCCCEEEEEEEEcc---CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCC
Confidence            44556667789999999999999999998765   67899999984             1245789999888    8999


Q ss_pred             cceeeeeeeCCCCCeEEEee-ccccCCHHHHhhhC-----------------------------Cccc------------
Q psy796           86 LVSILGVCTGEQPPWLVMEY-PAQLGDLVQHLNSA-----------------------------DNLT------------  123 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~-~~~~g~L~~~l~~~-----------------------------r~l~------------  123 (228)
                      |+++++++...+..+++||+ + .+++|.+++...                             +||+            
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPL-PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE
T ss_pred             eeeEEEEEecCCeEEEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe
Confidence            99999999888889999999 6 889999988643                             2332            


Q ss_pred             -------------------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 -------------------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 -------------------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                     ..... .+.++||||||+++|||++  |..||....  .    +...  
T Consensus       179 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~--~----~~~~--  248 (312)
T 2iwi_A          179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC--GDIPFERDQ--E----ILEA--  248 (312)
T ss_dssp             EEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH--H----HHHT--
T ss_pred             EEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH--CCCCCCChH--H----Hhhh--
Confidence                                           01112 2458999999999999999  568886421  1    1111  


Q ss_pred             CCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          172 GGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                            ....+..++.++.+++.+||+.+|++|||+.+++++
T Consensus       249 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          249 ------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  334567789999999999999999999999999873

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.93  E-value=1.5e-25  Score=185.55  Aligned_cols=186  Identities=16%  Similarity=0.190  Sum_probs=126.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ......++|++.+.||+|+||.||+|....   ++..||||.+.      ....++++.+..++|+||+++++++.....
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKS---TGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETT---TCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            344555789999999999999999999865   68899999883      446778888888999999999999865332


Q ss_pred             -------CeEEEeeccccCCHHHH-----------------------------hh--hC----Cccc-------------
Q psy796           99 -------PWLVMEYPAQLGDLVQH-----------------------------LN--SA----DNLT-------------  123 (228)
Q Consensus        99 -------~~lv~e~~~~~g~L~~~-----------------------------l~--~~----r~l~-------------  123 (228)
                             .+++|||+ + ++|.+.                             +|  ..    +||+             
T Consensus        94 ~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYV-P-DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             SCTTCEEEEEEEECC-S-CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEE
T ss_pred             ccccceeEEEEeecc-c-ccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcE
Confidence                   68999999 7 454332                             22  21    3443             


Q ss_pred             -------------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhh
Q psy796          124 -------------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYY  171 (228)
Q Consensus       124 -------------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~  171 (228)
                                                     . ....++.++||||||+++|||++  |..||.+.+.......+.....
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~  249 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML--GEPIFRGDNSAGQLHEIVRVLG  249 (360)
T ss_dssp             EECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh--CCCCcCCCChHHHHHHHHHHcC
Confidence                                           1 23347899999999999999999  6799998887766655544221


Q ss_pred             CCCc------------------------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          172 GGEL------------------------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       172 ~~~~------------------------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                      ....                        ......+...+.++.+|+.+||+.||.+|||+.++++|  ++.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence            1000                        00001123357889999999999999999999999974  4444

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=4.6e-26  Score=193.48  Aligned_cols=178  Identities=17%  Similarity=0.184  Sum_probs=130.5

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhC-CCCCcceeeeeeeCCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSL-QDPNLVSILGVCTGEQ   97 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~   97 (228)
                      .+.+.+...+|...++||+|+||.|+.....    +++.||||.+.    ..+.+|+++++.+ +||||+++++++.+..
T Consensus        16 ~~~~~i~~~~y~~~~~LG~G~~G~V~~~~~~----~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~   91 (432)
T 3p23_A           16 TSVVIVGKISFCPKDVLGHGAEGTIVYRGMF----DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ   91 (432)
T ss_dssp             --CEEETTEEEEEEEEEEECGGGCEEEEEES----SSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETT
T ss_pred             CCcEEEccEEEecCCeeecCcCEEEEEEEEe----CCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            4567777888999999999999996543222    67899999985    3367999999999 7999999999999888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC------------------------------Cccc------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~------------------------  123 (228)
                      ..+++|||+ . |+|.+++...                              |||+                        
T Consensus        92 ~~~lv~E~~-~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           92 FQYIAIELC-A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             EEEEEEECC-S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             EEEEEEECC-C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            899999999 6 6999988643                              3333                        


Q ss_pred             ----------------------------cc---cCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhC
Q psy796          124 ----------------------------RD---RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG  172 (228)
Q Consensus       124 ----------------------------~~---~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  172 (228)
                                                  +.   ...++.++|||||||+++||+++ |..||...............   
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~-g~~pf~~~~~~~~~~~~~~~---  245 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE-GSHPFGKSLQRQANILLGAC---  245 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTT-SCBTTBSTTTHHHHHHTTCC---
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcC-CCCCcchhhHHHHHHHhccC---
Confidence                                        00   23456689999999999999996 35788655444332211110   


Q ss_pred             CCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          173 GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                        .......+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       246 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          246 --SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             --CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence              00011122334567899999999999999999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.93  E-value=9.3e-26  Score=184.30  Aligned_cols=179  Identities=19%  Similarity=0.233  Sum_probs=133.5

Q ss_pred             CccccCCCCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhC
Q psy796           15 GQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSL   81 (228)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l   81 (228)
                      .......+.+..+.-.++|++.+.||+|+||.||+|....   ++..||+|.++             ..+.+|+.++.++
T Consensus        27 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  103 (320)
T 3a99_A           27 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV  103 (320)
T ss_dssp             -------------CCTTTEEEEEECSSSSSCEEEEEEETT---TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHH
T ss_pred             hhhhccCcccccCCccCceEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhh
Confidence            3344555566777778889999999999999999998765   78999999984             2356799999998


Q ss_pred             C--CCCcceeeeeeeCCCCCeEEEeecccc-CCHHHHhhhC-----------------------------Cccc------
Q psy796           82 Q--DPNLVSILGVCTGEQPPWLVMEYPAQL-GDLVQHLNSA-----------------------------DNLT------  123 (228)
Q Consensus        82 ~--h~niv~~~g~~~~~~~~~lv~e~~~~~-g~L~~~l~~~-----------------------------r~l~------  123 (228)
                      +  |+||+++++++...+..+++||++ .+ ++|.+++...                             +||+      
T Consensus       104 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll  182 (320)
T 3a99_A          104 SSGFSGVIRLLDWFERPDSFVLILERP-EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI  182 (320)
T ss_dssp             CSSSCSBCCEEEEEECSSEEEEEEECC-SSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             ccCCCCceEEEEEEecCCcEEEEEEcC-CCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEE
Confidence            6  599999999999988899999998 64 8999987643                             3333      


Q ss_pred             -------------------------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q psy796          124 -------------------------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN  165 (228)
Q Consensus       124 -------------------------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~  165 (228)
                                                           ..... ++.++||||||+++|||++  |..||....  .    
T Consensus       183 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~--~----  254 (320)
T 3a99_A          183 DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC--GDIPFEHDE--E----  254 (320)
T ss_dssp             ETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH--H----
T ss_pred             eCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH--CCCCCCChh--h----
Confidence                                                 11122 3678999999999999999  668886421  1    


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +...        ....+..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       255 ~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          255 IIRG--------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHHC--------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhcc--------cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111        233566789999999999999999999999999873

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=1.7e-25  Score=187.86  Aligned_cols=180  Identities=15%  Similarity=0.204  Sum_probs=130.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCCC------CCe
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGEQ------PPW  100 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~~------~~~  100 (228)
                      ..+|++.+.||+|+||.||+|...    .+..||+|.+.   ....+|+++++.++|+||+++++++....      ..+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~----~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLV----ESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEET----TTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEEC----CCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            346888999999999999999886    34458888873   33468999999999999999999985433      268


Q ss_pred             EEEeeccccCCHHHHhh-----------------------------hC----Cccc------------------------
Q psy796          101 LVMEYPAQLGDLVQHLN-----------------------------SA----DNLT------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~-----------------------------~~----r~l~------------------------  123 (228)
                      ++|||+ ++ ++...+.                             ..    |||+                        
T Consensus       115 lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          115 LVLEYV-PE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EEEECC-SE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEeecc-Cc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            999999 75 4333221                             11    4444                        


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-------
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-------  175 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------  175 (228)
                                           .....++.++|||||||++|||++  |..||.+.+..+....+.........       
T Consensus       193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  270 (394)
T 4e7w_A          193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ--GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN  270 (394)
T ss_dssp             CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence                                 123358899999999999999999  67999988876655554432110000       


Q ss_pred             ----cccC----------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          176 ----QVFL----------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       176 ----~~~~----------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                          ....          ..+..++.++.+|+.+||+.||.+|||+.++++|  ++.+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence                0000          1134578899999999999999999999999975  4444

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.92  E-value=4e-25  Score=184.77  Aligned_cols=177  Identities=15%  Similarity=0.127  Sum_probs=132.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC-CC-----CcceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ-DP-----NLVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~-h~-----niv~~~g~~~~~~   97 (228)
                      .++|++.+.||+|+||.||+|....   .++.||||+++      ..+.+|+.++..++ |+     +++++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRV---EQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcC---CCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            3678999999999999999998865   68899999984      44667888888774 44     4899999998888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC---------------------------------Cccc---------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA---------------------------------DNLT---------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~---------------------------------r~l~---------------------  123 (228)
                      ..++||||+ . |+|.+++...                                 +||+                     
T Consensus       130 ~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          130 HLCLVFEML-S-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             EEEEEEECC-C-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             ceEEEEecC-C-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            899999998 7 6998877542                                 3333                     


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc----
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV----  177 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----  177 (228)
                                            ..+..++.++|||||||++|||++  |..||.+.+..+....+...........    
T Consensus       208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  285 (382)
T 2vx3_A          208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT--GEPLFSGANEVDQMNKIVEVLGIPPAHILDQA  285 (382)
T ss_dssp             CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred             ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence                                  223467899999999999999999  6799998887776665554321100000    


Q ss_pred             -------------------------cCCCCCC---------------------------CcHHHHHHHHHhhccCCCCCC
Q psy796          178 -------------------------FLPKPSL---------------------------CPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       178 -------------------------~~~~~~~---------------------------~~~~l~~li~~c~~~~p~~Rp  205 (228)
                                               ....+..                           ..+++.+|+.+||+.||.+||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rp  365 (382)
T 2vx3_A          286 PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRI  365 (382)
T ss_dssp             TTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCC
Confidence                                     0000000                           013789999999999999999


Q ss_pred             CHHHHHHH
Q psy796          206 TFKQIYSF  213 (228)
Q Consensus       206 s~~~v~~~  213 (228)
                      |+.++++|
T Consensus       366 ta~e~L~h  373 (382)
T 2vx3_A          366 QPYYALQH  373 (382)
T ss_dssp             CHHHHTTS
T ss_pred             CHHHHhcC
Confidence            99999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.92  E-value=9.6e-25  Score=178.67  Aligned_cols=180  Identities=17%  Similarity=0.235  Sum_probs=135.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCC------CcceeeeeeeC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDP------NLVSILGVCTG   95 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~------niv~~~g~~~~   95 (228)
                      +-.++|++.+.||+|+||.||++.....  .+..||+|+++      ..+.+|++++..++|+      +++++++++..
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~   88 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKA--GGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   88 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCC--CCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence            3456799999999999999999987321  67899999984      4578899999887654      59999999998


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                      .+..+++|||+  +++|.+++...                               +||+                     
T Consensus        89 ~~~~~lv~e~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           89 HGHICIVFELL--GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             TTEEEEEEECC--CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             CCcEEEEEcCC--CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence            88999999998  48998888643                               2222                     


Q ss_pred             ---------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHH
Q psy796          124 ---------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQ  164 (228)
Q Consensus       124 ---------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~  164 (228)
                                                             ..+..++.++||||||+++|||++  |..||...+..+...
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~  244 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL--GFTVFPTHDSKEHLA  244 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH--SSCSCCCSCHHHHHH
T ss_pred             ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCChHHHHH
Confidence                                                   223467899999999999999999  678998877766554


Q ss_pred             HHHHhhhCC------------------------------------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy796          165 NAEHMYYGG------------------------------------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFK  208 (228)
Q Consensus       165 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~  208 (228)
                      .+.......                                    ........+...++++.+++.+||+.||.+|||+.
T Consensus       245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  324 (339)
T 1z57_A          245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR  324 (339)
T ss_dssp             HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence            443322100                                    00000111223467899999999999999999999


Q ss_pred             HHHHH
Q psy796          209 QIYSF  213 (228)
Q Consensus       209 ~v~~~  213 (228)
                      +++++
T Consensus       325 ell~h  329 (339)
T 1z57_A          325 EALKH  329 (339)
T ss_dssp             HHTTS
T ss_pred             HHhcC
Confidence            99864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.92  E-value=6.9e-25  Score=184.69  Aligned_cols=173  Identities=18%  Similarity=0.261  Sum_probs=118.1

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeC--CCCCeEEEeeccc
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTG--EQPPWLVMEYPAQ  108 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~~lv~e~~~~  108 (228)
                      ++.||+|+||.||+|...... .+..||+|.+.     ..+.+|+.+++.++|+||+++++++..  ....+++|||+ .
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~-~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGK-DDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-E  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSS-CCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECC-S
T ss_pred             CcEeeecCCeEEEEEEEccCC-CCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCC-C
Confidence            457999999999999875311 56889999985     568899999999999999999999954  55789999998 6


Q ss_pred             cCCHHHHhhhC--------------------------------------Cccc---------------------------
Q psy796          109 LGDLVQHLNSA--------------------------------------DNLT---------------------------  123 (228)
Q Consensus       109 ~g~L~~~l~~~--------------------------------------r~l~---------------------------  123 (228)
                       |+|.+++...                                      +||+                           
T Consensus       104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence             6777665411                                      3333                           


Q ss_pred             ------------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---------HHHHHHHHh
Q psy796          124 ------------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---------QVIQNAEHM  169 (228)
Q Consensus       124 ------------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---------~~~~~~~~~  169 (228)
                                              + ....++.++|||||||++|||++  |..||.+....         +....+...
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~l~~i~~~  260 (405)
T 3rgf_A          183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDIKTSNPYHHDQLDRIFNV  260 (405)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHH--SSCTTCCCC------CCCCHHHHHHHHHH
T ss_pred             CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHh--CCCCCCCccccccccccchHHHHHHHHHh
Confidence                                    1 12347889999999999999999  66888755431         222222221


Q ss_pred             hhCCCc---c-----------------ccC----------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          170 YYGGEL---Q-----------------VFL----------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       170 ~~~~~~---~-----------------~~~----------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ......   .                 ...          ......+.++.+|+.+||+.||.+|||+.++++|
T Consensus       261 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            110000   0                 000          0011236788999999999999999999999974

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.92  E-value=2.2e-24  Score=179.17  Aligned_cols=182  Identities=10%  Similarity=0.081  Sum_probs=139.1

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEec--cCCCceeEEeecch----HHHHHHHHHHhhCC---CCCcceeee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETED--IELDTEKVAVRTCR----GDSLREIRFLSSLQ---DPNLVSILG   91 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vavK~~~----~~~~~e~~~l~~l~---h~niv~~~g   91 (228)
                      ...+.+++..++|.+.+.||+|+||.||+|.+..  ....++.||+|.++    .++.+|++++..++   |+|++++++
T Consensus        55 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           55 KPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             CSSCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             ccceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            3456777888999999999999999999995422  11167899999985    56788888888886   999999999


Q ss_pred             eeeCCCCCeEEEeeccccCCHHHHhhh-----C-----------------------------Cccc--------------
Q psy796           92 VCTGEQPPWLVMEYPAQLGDLVQHLNS-----A-----------------------------DNLT--------------  123 (228)
Q Consensus        92 ~~~~~~~~~lv~e~~~~~g~L~~~l~~-----~-----------------------------r~l~--------------  123 (228)
                      ++...+..++||||+ ++|+|.+++..     .                             |||+              
T Consensus       135 ~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          135 AHLFQNGSVLVGELY-SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             EEECSSCEEEEECCC-CSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred             eeecCCCcEEEEecc-CCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence            999999999999999 99999999863     1                             3333              


Q ss_pred             -------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH
Q psy796          124 -------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE  160 (228)
Q Consensus       124 -------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~  160 (228)
                                                                 +.+..++.++|||||||++|||++  |..||......
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~pf~~~~~~  291 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF--GTYMKVKNEGG  291 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH--SSCCCEEEETT
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHh--CCCccccCCCC
Confidence                                                       233457899999999999999999  55777543221


Q ss_pred             HHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCC-CCHHHHHHHHHHH
Q psy796          161 QVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMR-PTFKQIYSFMKRS  217 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~R-ps~~~v~~~l~~~  217 (228)
                      ..       .    .. ........++.+.+++..|++.+|.+| |++.++.+.|+.+
T Consensus       292 ~~-------~----~~-~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          292 EC-------K----PE-GLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             EE-------E----EC-SCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             ce-------e----ec-hhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence            00       0    00 011112346789999999999999998 7788899888887

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.92  E-value=1.2e-25  Score=187.25  Aligned_cols=175  Identities=13%  Similarity=0.103  Sum_probs=117.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHH---HHHhhCCCCCcceee-----
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREI---RFLSSLQDPNLVSIL-----   90 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~---~~l~~l~h~niv~~~-----   90 (228)
                      ...+|.+.+.||+|+||.||+|....   +++.||+|.++          ..+.+|+   ..|.. +|||+++++     
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~  135 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVE---RLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLL  135 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCC
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECC---CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEe
Confidence            34458899999999999999999865   78999999984          3356774   44555 799988754     


Q ss_pred             --eeeeCC-----------------CCCeEEEeeccccCCHHHHhhhC--------------------------------
Q psy796           91 --GVCTGE-----------------QPPWLVMEYPAQLGDLVQHLNSA--------------------------------  119 (228)
Q Consensus        91 --g~~~~~-----------------~~~~lv~e~~~~~g~L~~~l~~~--------------------------------  119 (228)
                        +++...                 ...++||||+ + |+|.+++...                                
T Consensus       136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~  213 (371)
T 3q60_A          136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAA-S-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK  213 (371)
T ss_dssp             CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCC-S-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eehheecCCCCCeeeccCCcccceeeeEEEEecCC-C-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence              333322                 2269999999 8 8999988642                                


Q ss_pred             ----Cccc-----------------------------------------ccc--CCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 ----DNLT-----------------------------------------RDR--DRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 ----r~l~-----------------------------------------~~~--~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                          |||+                                         ...  ..++.++|||||||++|||++  |..
T Consensus       214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt--g~~  291 (371)
T 3q60_A          214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC--LFL  291 (371)
T ss_dssp             TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH--SSC
T ss_pred             CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh--CCC
Confidence                3443                                         222  568999999999999999999  668


Q ss_pred             CCCCCChHHHHHHHHHh--hhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          153 PFPHLTNEQVIQNAEHM--YYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ||.+........ ....  ..........+.+..++.++.+|+.+||+.||++|||+.++++
T Consensus       292 Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          292 PFGLVTPGIKGS-WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             STTBCCTTCTTC-CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCcCcccccc-hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            987764321100 0000  0001111123334578999999999999999999999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.91  E-value=1.6e-24  Score=184.07  Aligned_cols=170  Identities=19%  Similarity=0.232  Sum_probs=124.1

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCCeEEEeecc
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPA  107 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~lv~e~~~  107 (228)
                      +...+.||+|+||.||.+...    +++.||||.+.    ..+.+|+.++.++ +||||+++++++...+..+++|||| 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~----~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~-   91 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSF----QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-   91 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEES----SSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             eeccCeEeeCCCeEEEEEEEE----CCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC-
Confidence            345688999999999765332    68999999884    4468899999875 8999999999999888899999999 


Q ss_pred             ccCCHHHHhhhC------------------------------------Cccc----------------------------
Q psy796          108 QLGDLVQHLNSA------------------------------------DNLT----------------------------  123 (228)
Q Consensus       108 ~~g~L~~~l~~~------------------------------------r~l~----------------------------  123 (228)
                      . |+|.+++...                                    +||+                            
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            7 6998887543                                    2222                            


Q ss_pred             ---------------------------------c-------ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH
Q psy796          124 ---------------------------------R-------DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI  163 (228)
Q Consensus       124 ---------------------------------~-------~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~  163 (228)
                                                       .       ....++.++|||||||++|||+++ |..||.+.....  
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~-g~~Pf~~~~~~~--  247 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK-GKHPFGDKYSRE--  247 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTT-SCCTTCSTTTHH--
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhC-CCCCCCCchhhH--
Confidence                                             0       014578889999999999999985 358887654433  


Q ss_pred             HHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          164 QNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ..+........ ......+..++.++.+++.+||+.+|.+|||+.+|++
T Consensus       248 ~~i~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 SNIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHTCCCCC-CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCCcc-cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            12222211100 0000111234678999999999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.91  E-value=4.6e-24  Score=175.81  Aligned_cols=178  Identities=17%  Similarity=0.223  Sum_probs=131.5

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCC------cceeeeeeeCCC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPN------LVSILGVCTGEQ   97 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~n------iv~~~g~~~~~~   97 (228)
                      .++|++.+.||+|+||.||++.....  .+..||+|+++      ..+.+|+.++..++|++      ++.+++++....
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHAR--GKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCC--CceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            56799999999999999999987541  34789999984      45778999998886655      889999998888


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||+ . +++.+++...                               +||+                       
T Consensus        96 ~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           96 HMCIAFELL-G-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEEEECC-C-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             eEEEEEecc-C-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            899999998 5 6776666432                               2222                       


Q ss_pred             -------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q psy796          124 -------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNA  166 (228)
Q Consensus       124 -------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~  166 (228)
                                                           ..+..++.++||||||+++|||++  |..||...+..+....+
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~  251 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR--GFTLFQTHENREHLVMM  251 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHH
T ss_pred             cccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh--CCCCCCCCCHHHHHHHH
Confidence                                                 223467889999999999999999  67999887776655444


Q ss_pred             HHhhhCCC------------------------------------ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy796          167 EHMYYGGE------------------------------------LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI  210 (228)
Q Consensus       167 ~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v  210 (228)
                      ........                                    ...........+.++.+|+.+||+.||.+|||+.++
T Consensus       252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            33221000                                    000001112234589999999999999999999999


Q ss_pred             HHH
Q psy796          211 YSF  213 (228)
Q Consensus       211 ~~~  213 (228)
                      +++
T Consensus       332 l~h  334 (355)
T 2eu9_A          332 LLH  334 (355)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.91  E-value=1.4e-24  Score=180.45  Aligned_cols=181  Identities=15%  Similarity=0.214  Sum_probs=129.6

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC-----------CCCcce
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ-----------DPNLVS   88 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~-----------h~niv~   88 (228)
                      ..+...+|++.+.||+|+||.||+|....   .++.||+|.+.      ..+.+|+.++.++.           |+||++
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           14 EPYKDARYILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             CEETTTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             CcccCCeEEEEEeeeecCCeEEEEEEecC---CCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            34566789999999999999999998765   78999999984      45788999988875           899999


Q ss_pred             eeeeeeCCC----CCeEEEeeccccCCHHHHhhhC--------------------------------Cccc---------
Q psy796           89 ILGVCTGEQ----PPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT---------  123 (228)
Q Consensus        89 ~~g~~~~~~----~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~---------  123 (228)
                      +++++....    ..+++|||+  +++|.+++...                                +||+         
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~  168 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVL--GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV  168 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCC--CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEE
T ss_pred             HHHHhhccCCCCceEEEEEecC--CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEecc
Confidence            999987543    578999997  58888877542                                2332         


Q ss_pred             --------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-----
Q psy796          124 --------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-----  160 (228)
Q Consensus       124 --------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-----  160 (228)
                                                            ..+..++.++||||||+++|||++  |..||...+..     
T Consensus       169 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          169 DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT--GDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH--SSCCC---------CH
T ss_pred             CCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCcccccCCh
Confidence                                                  223457899999999999999999  66898765421     


Q ss_pred             -HHHHHHHHhhhCCC----------------------------------ccccCCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy796          161 -QVIQNAEHMYYGGE----------------------------------LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRP  205 (228)
Q Consensus       161 -~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rp  205 (228)
                       +....+........                                  .......+..++.++.+|+.+||+.||.+||
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence             22222221110000                                  0001122334567899999999999999999


Q ss_pred             CHHHHHHH
Q psy796          206 TFKQIYSF  213 (228)
Q Consensus       206 s~~~v~~~  213 (228)
                      |+.+++++
T Consensus       327 t~~ell~h  334 (373)
T 1q8y_A          327 DAGGLVNH  334 (373)
T ss_dssp             CHHHHHTC
T ss_pred             CHHHHhhC
Confidence            99999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.91  E-value=4.8e-24  Score=178.30  Aligned_cols=84  Identities=20%  Similarity=0.274  Sum_probs=69.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC--------CCCcceeeeee
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ--------DPNLVSILGVC   93 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~--------h~niv~~~g~~   93 (228)
                      +-.++|++.+.||+|+||.||+|....   .++.||+|.++      ..+.+|+.++..++        |+||+++++++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~  110 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQ---GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF  110 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecC---CCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence            335779999999999999999998765   78999999984      55788999998884        78899999998


Q ss_pred             e----CCCCCeEEEeeccccCCHHHHh
Q psy796           94 T----GEQPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        94 ~----~~~~~~lv~e~~~~~g~L~~~l  116 (228)
                      .    .....+++|||+ . ++|.+++
T Consensus       111 ~~~~~~~~~~~lv~e~~-~-~~l~~~~  135 (397)
T 1wak_A          111 KISGVNGTHICMVFEVL-G-HHLLKWI  135 (397)
T ss_dssp             EEEETTEEEEEEEECCC-C-CBHHHHH
T ss_pred             eecCCCCceEEEEEecc-C-ccHHHHH
Confidence            7    445789999998 5 5665544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=7.5e-25  Score=193.35  Aligned_cols=181  Identities=28%  Similarity=0.405  Sum_probs=127.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC------C
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG------E   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~------~   96 (228)
                      ++|++.+.||+|+||.||+|....   ++..||+|.++        ..+.+|++++.+++||||+++++++..      .
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~---tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~   90 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN   90 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTT---TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence            568999999999999999998765   78999999873        457899999999999999999998755      5


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC--------------------------------Cccc---------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA--------------------------------DNLT---------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~--------------------------------r~l~---------------------  123 (228)
                      +..+++|||+ ++|+|.+++...                                +||+                     
T Consensus        91 ~~~~LVmEy~-~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           91 DLPLLAMEYC-EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             SSCCCEEECC-SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CeEEEEEEeC-CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            5679999999 999999998653                                2222                     


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH-H-----HH-hhh
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN-A-----EH-MYY  171 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~-~-----~~-~~~  171 (228)
                                               ..+..++.++||||||+++|||++  |..||.+......+.. +     .. ...
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~~~~~~~i~~~~~~~~~~~  247 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT--GFRPFLPNWQPVQWHGKVREKSNEHIVVY  247 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHS--SCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred             cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHH--CCCCCCcccchhhhhhhhhcccchhhhhh
Confidence                                     233567889999999999999999  5688876433211000 0     00 000


Q ss_pred             ---CC--CccccCCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHH-----HHHHHHH
Q psy796          172 ---GG--ELQVFLPKP----SLCPRDIYDLMCDCWKRDQTMRPTFKQI-----YSFMKRS  217 (228)
Q Consensus       172 ---~~--~~~~~~~~~----~~~~~~l~~li~~c~~~~p~~Rps~~~v-----~~~l~~~  217 (228)
                         .+  ......+.+    ..++.++.+++..||..||.+|||+.++     .+.++.+
T Consensus       248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i  307 (676)
T 3qa8_A          248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI  307 (676)
T ss_dssp             CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred             hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence               00  000011112    2356789999999999999999999884     4555555

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.88  E-value=4.6e-23  Score=184.16  Aligned_cols=171  Identities=15%  Similarity=0.119  Sum_probs=124.0

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC-
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP-   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~-   98 (228)
                      +-..+|++.+.||+|+||.||++.....  +++.||||.+.        ..+.+|+.++.+++|+||+++++++...+. 
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  154 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH  154 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence            3447899999999999999999988532  46899999873        457899999999999999999999987654 


Q ss_pred             ----CeEEEeeccccCCHHHHhhhC---------------------------Cccc------------------------
Q psy796           99 ----PWLVMEYPAQLGDLVQHLNSA---------------------------DNLT------------------------  123 (228)
Q Consensus        99 ----~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~------------------------  123 (228)
                          .++||||+ ++++|.+++...                           +||+                        
T Consensus       155 ~~~~~~lv~E~~-~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          155 GDPVGYIVMEYV-GGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS  233 (681)
T ss_dssp             SCEEEEEEEECC-CCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTC
T ss_pred             CCceeEEEEEeC-CCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhccc
Confidence                69999999 999998766432                           4444                        


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    ......+.++||||||++++||++  +..||.+......             . ........+..+
T Consensus       234 ~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~--g~~~~~~~~~~~~-------------~-~~~~~~~~~~~l  297 (681)
T 2pzi_A          234 FGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTL--DLPTRNGRYVDGL-------------P-EDDPVLKTYDSY  297 (681)
T ss_dssp             CSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHS--CCCEETTEECSSC-------------C-TTCHHHHHCHHH
T ss_pred             CCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHh--CCCCCcccccccc-------------c-ccccccccCHHH
Confidence                          001123678999999999999999  5566654211000             0 000011235789


Q ss_pred             HHHHHHhhccCCCCCCC-HHHHHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPT-FKQIYSFMKRS  217 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps-~~~v~~~l~~~  217 (228)
                      .+++.+||+.+|.+||+ ++++...|..+
T Consensus       298 ~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          298 GRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            99999999999999995 66666666554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.85  E-value=4.7e-22  Score=167.89  Aligned_cols=165  Identities=13%  Similarity=0.038  Sum_probs=117.1

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCC-CCcceee-------
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQD-PNLVSIL-------   90 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h-~niv~~~-------   90 (228)
                      ...++...+.||+|+||.||+|....   +++.||||+++          +.+.+|+.++..++| +|...+.       
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~  152 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF  152 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCC
T ss_pred             CceeEEEecccccCCCEEEEEEEecC---CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhccccc
Confidence            34557788999999999999999865   68899999885          557899999999977 3221111       


Q ss_pred             --------------eeeeC-----CCCCeEEEeeccccCCHHHHhhh-------C-------------------------
Q psy796           91 --------------GVCTG-----EQPPWLVMEYPAQLGDLVQHLNS-------A-------------------------  119 (228)
Q Consensus        91 --------------g~~~~-----~~~~~lv~e~~~~~g~L~~~l~~-------~-------------------------  119 (228)
                                    .+...     ....+++|+++  +++|.+++..       .                         
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  230 (413)
T 3dzo_A          153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM--QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  230 (413)
T ss_dssp             CCEEEECCC---------------CCSEEEEEECC--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhhcccCCCCccccccCCCccccccceEEEeehh--cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                          11111     12346777764  5888887730       0                         


Q ss_pred             ----Cccc----------------------------------------c----------ccCCCCCccchHHHHHHHHHH
Q psy796          120 ----DNLT----------------------------------------R----------DRDRYTCQSNVWSFAVTLWEI  145 (228)
Q Consensus       120 ----r~l~----------------------------------------~----------~~~~~~~~~Dv~s~Gv~l~el  145 (228)
                          |||+                                        +          ....++.++|||||||++|||
T Consensus       231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el  310 (413)
T 3dzo_A          231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI  310 (413)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred             CcccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence                5555                                        1          333466799999999999999


Q ss_pred             HhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy796          146 LSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS  212 (228)
Q Consensus       146 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~  212 (228)
                      ++  |..||...+.......            .+.....+++++.+|+.+||+.+|.+||++.++++
T Consensus       311 lt--g~~Pf~~~~~~~~~~~------------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          311 WC--ADLPNTDDAALGGSEW------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HH--SSCCCCTTGGGSCSGG------------GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HH--CCCCCCCcchhhhHHH------------HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            99  6689976554332111            22234467899999999999999999999877764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.78  E-value=6e-21  Score=156.66  Aligned_cols=83  Identities=20%  Similarity=0.339  Sum_probs=65.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhCC---------C
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSLQ---------D   83 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l~---------h   83 (228)
                      +..++|++.+.||+|+||.||+|..     +++.||||.++               ..+.+|+.+++.++         |
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h   91 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA-----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRT   91 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE-----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBC
T ss_pred             cccccchheeeecccCceEEEEEEe-----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccC
Confidence            4557789999999999999999987     57999999984               56889999988875         6


Q ss_pred             CCcceeeeee-----------------eC-------------CCCCeEEEeeccccCCHHHHh
Q psy796           84 PNLVSILGVC-----------------TG-------------EQPPWLVMEYPAQLGDLVQHL  116 (228)
Q Consensus        84 ~niv~~~g~~-----------------~~-------------~~~~~lv~e~~~~~g~L~~~l  116 (228)
                      +|++++.+++                 ..             ....++||||+ ++|++.+.+
T Consensus        92 ~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~-~~g~ll~~~  153 (336)
T 2vuw_A           92 EGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE-FGGIDLEQM  153 (336)
T ss_dssp             CCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE-CCCEETGGG
T ss_pred             CchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec-CCCccHHHH
Confidence            6666665553                 32             56789999999 888654433

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.20  E-value=6.7e-11  Score=103.50  Aligned_cols=107  Identities=20%  Similarity=0.076  Sum_probs=76.2

Q ss_pred             eecccceeeEEEEEEeccCCCceeEEeecch-----------------HHHHHHHHHHhhC-CCCCcceeeeeeeCCCCC
Q psy796           38 RLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------------GDSLREIRFLSSL-QDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        38 ~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------------~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~   99 (228)
                      ..+.|.+|.+..++..-   .+..+++|.+.                 +++.+|+++|+++ .|+||+++++++.++...
T Consensus       241 ~~~~~~~~~h~~~rr~~---fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~  317 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYF---FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG  317 (569)
T ss_dssp             C-C--------CCEEEE---ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred             ccccCCccccccccccc---ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence            34555555544433322   56788999882                 4588999999999 799999999999999999


Q ss_pred             eEEEeeccccCCHHHHhhhC--------------------------Cccc----------------------cccCCCCC
Q psy796          100 WLVMEYPAQLGDLVQHLNSA--------------------------DNLT----------------------RDRDRYTC  131 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~--------------------------r~l~----------------------~~~~~~~~  131 (228)
                      ||||||+ +|++|.++|.+.                          ||||                      ........
T Consensus       318 yLVMEyv-~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          318 WLVMEKL-PGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EEEEECC-CSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EEEEecC-CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            9999999 999999999765                          7777                      11222345


Q ss_pred             ccchHHHHHHHHHHHhc
Q psy796          132 QSNVWSFAVTLWEILSL  148 (228)
Q Consensus       132 ~~Dv~s~Gv~l~el~~~  148 (228)
                      .+++|+.|.+..|++.+
T Consensus       397 ~t~vGTp~YmAPE~l~g  413 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAE  413 (569)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             cCceechhhccHHHhCC
Confidence            67899999999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.98  E-value=1.2e-09  Score=95.05  Aligned_cols=77  Identities=12%  Similarity=0.049  Sum_probs=57.7

Q ss_pred             eeeecccceeeEEEEEEeccCCCceeEEeecch---------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           36 LERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        36 ~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      .+.||+|+||.||+|.+     .+..+++|...               +.+.+|++++++++|+||+++..++...+..+
T Consensus       341 ~~~LG~G~fg~Vy~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             -------CCEEEEEEEC-----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred             CCEEeeCCCEEEEEEEE-----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence            46899999999999955     56778888641               33789999999999999996555665677789


Q ss_pred             EEEeeccccCCHHHHhhh
Q psy796          101 LVMEYPAQLGDLVQHLNS  118 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~  118 (228)
                      ++|||+ ++++|.+++..
T Consensus       416 lVmE~~-~ggsL~~~l~~  432 (540)
T 3en9_A          416 IMMSYI-NGKLAKDVIED  432 (540)
T ss_dssp             EEEECC-CSEEHHHHSTT
T ss_pred             EEEECC-CCCCHHHHHHH
Confidence            999999 99999998764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.80  E-value=8.9e-09  Score=82.22  Aligned_cols=73  Identities=16%  Similarity=0.211  Sum_probs=60.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------------------HHHHHHHHHHhhCCCCCcc
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------------------GDSLREIRFLSSLQDPNLV   87 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------------------~~~~~e~~~l~~l~h~niv   87 (228)
                      +.+.+.||+|+||.||+|.. .   ++..||+|.++                         ..+.+|+.++.+++  | +
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~---~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~  164 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-E---KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-L  164 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-T---TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-S
T ss_pred             EEecCEeccCCCceEEEEEe-C---CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-C
Confidence            34669999999999999998 3   78999999983                         23679999999998  5 6


Q ss_pred             eeeeeeeCCCCCeEEEeeccccCCHHH
Q psy796           88 SILGVCTGEQPPWLVMEYPAQLGDLVQ  114 (228)
Q Consensus        88 ~~~g~~~~~~~~~lv~e~~~~~g~L~~  114 (228)
                      ++.+++.. +..+++|||+ ++|+|.+
T Consensus       165 ~v~~~~~~-~~~~lvmE~~-~g~~L~~  189 (282)
T 1zar_A          165 AVPKVYAW-EGNAVLMELI-DAKELYR  189 (282)
T ss_dssp             SSCCEEEE-ETTEEEEECC-CCEEGGG
T ss_pred             CcCeEEec-cceEEEEEec-CCCcHHH
Confidence            66665533 5679999999 9999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.37  E-value=6.8e-07  Score=70.24  Aligned_cols=76  Identities=16%  Similarity=0.094  Sum_probs=56.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCcee--EEeecch-------------------------------HHHHHHHHHHh
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEK--VAVRTCR-------------------------------GDSLREIRFLS   79 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~--vavK~~~-------------------------------~~~~~e~~~l~   79 (228)
                      +++.+.||+|+||.||+|....   ++..  ||||+++                               ..+.+|+.++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~---~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  125 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVF---DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE  125 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE---TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcC---CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence            4577899999999999998844   6778  9999752                               14678999999


Q ss_pred             hCCCCCc--ceeeeeeeCCCCCeEEEeecccc-C----CHHHHh
Q psy796           80 SLQDPNL--VSILGVCTGEQPPWLVMEYPAQL-G----DLVQHL  116 (228)
Q Consensus        80 ~l~h~ni--v~~~g~~~~~~~~~lv~e~~~~~-g----~L~~~l  116 (228)
                      .+.|+++  ..+++.    +..+|||||+ .+ |    +|.++.
T Consensus       126 ~l~~~~i~~p~~~~~----~~~~lVmE~~-g~~g~~~~~L~~~~  164 (258)
T 1zth_A          126 RAKEAGVSVPQPYTY----MKNVLLMEFI-GEDELPAPTLVELG  164 (258)
T ss_dssp             HHHHTTCCCCCEEEE----ETTEEEEECC-EETTEECCBHHHHG
T ss_pred             HHHhCCCCCCeEEEc----CCCEEEEEec-CCCCCccccHHHHh
Confidence            9987754  344432    3578999999 63 4    666654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.26  E-value=1.7e-07  Score=77.78  Aligned_cols=78  Identities=15%  Similarity=0.124  Sum_probs=49.0

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------------------HHHHHHHHHHhhCCCCCcceeee
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------------------GDSLREIRFLSSLQDPNLVSILG   91 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------------------~~~~~e~~~l~~l~h~niv~~~g   91 (228)
                      ++++..||+|+||.||+|...    .++.||||+++                     ..+.++++++....|+|+.+++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~----~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~  172 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE----KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE  172 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT----TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECC----CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            678899999999999999864    68899999863                     11222233322223334333322


Q ss_pred             eeeC------CCCCeEEEeeccccCCHHHH
Q psy796           92 VCTG------EQPPWLVMEYPAQLGDLVQH  115 (228)
Q Consensus        92 ~~~~------~~~~~lv~e~~~~~g~L~~~  115 (228)
                      ....      .+..+|+|||+ ++++|...
T Consensus       173 ~gv~vp~p~~~~~~~LVME~i-~G~~L~~l  201 (397)
T 4gyi_A          173 EGFPVPEPIAQSRHTIVMSLV-DALPMRQV  201 (397)
T ss_dssp             TTCSCCCEEEEETTEEEEECC-SCEEGGGC
T ss_pred             cCCCCCeeeeccCceEEEEec-CCccHhhh
Confidence            2111      12347999999 88877654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.39  E-value=0.00032  Score=54.62  Aligned_cols=79  Identities=11%  Similarity=0.013  Sum_probs=64.6

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~  103 (228)
                      .+++...++.|+.+.||+...     .+..+++|...       ..+.+|+.++..+. +..+.+++++.......+++|
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~-----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             cceeEeeccCCCCCeEEEEEC-----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            367777888889999999864     56789999875       35889999999884 667788998888777789999


Q ss_pred             eeccccCCHHHHh
Q psy796          104 EYPAQLGDLVQHL  116 (228)
Q Consensus       104 e~~~~~g~L~~~l  116 (228)
                      ||+ +|.+|.+.+
T Consensus        90 e~i-~G~~l~~~~  101 (263)
T 3tm0_A           90 SEA-DGVLCSEEY  101 (263)
T ss_dssp             ECC-SSEEHHHHC
T ss_pred             Eec-CCeehhhcc
Confidence            999 988888753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.61  E-value=0.0026  Score=48.99  Aligned_cols=76  Identities=18%  Similarity=0.181  Sum_probs=55.9

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCCCCC--cceeeeeeeCCCCCeEEEeec
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQDPN--LVSILGVCTGEQPPWLVMEYP  106 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~h~n--iv~~~g~~~~~~~~~lv~e~~  106 (228)
                      +.+..+.+.|..+.||+....    ++..+++|...    ..+.+|+.+++.+.+.+  +.+++++.......+++|||+
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~----~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQ----GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECT----TSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CceEecccCCCCceEEEEecC----CCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            344333346667999998653    46789999874    45789999998885444  457888887777789999999


Q ss_pred             cccCCHH
Q psy796          107 AQLGDLV  113 (228)
Q Consensus       107 ~~~g~L~  113 (228)
                       +|.++.
T Consensus        98 -~G~~l~  103 (264)
T 1nd4_A           98 -PGQDLL  103 (264)
T ss_dssp             -SSEETT
T ss_pred             -CCcccC
Confidence             987774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.87  E-value=0.017  Score=47.05  Aligned_cols=73  Identities=18%  Similarity=0.246  Sum_probs=54.5

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCC--CCCcceeeeeeeCCC---CC
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQ--DPNLVSILGVCTGEQ---PP   99 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~--h~niv~~~g~~~~~~---~~   99 (228)
                      -.+.++.|.++.||+...     .+..+++|...          ..+.+|..+++.+.  +..+.++++++.+.+   ..
T Consensus        42 ~~~~l~~G~sn~~y~v~~-----~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT-----PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC-----SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEE-----CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            357789999999999876     34577777764          35788999999886  445778888886653   47


Q ss_pred             eEEEeeccccCCHH
Q psy796          100 WLVMEYPAQLGDLV  113 (228)
Q Consensus       100 ~lv~e~~~~~g~L~  113 (228)
                      +++|||+ ++..+.
T Consensus       117 ~~vme~v-~G~~l~  129 (359)
T 3dxp_A          117 FYIMEFV-SGRVLW  129 (359)
T ss_dssp             EEEEECC-CCBCCC
T ss_pred             EEEEEec-CCeecC
Confidence            8999999 876663

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.88  E-value=0.37  Score=38.53  Aligned_cols=74  Identities=18%  Similarity=0.211  Sum_probs=56.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC---CCCcceeeeeeeCCCCCeEEEee
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ---DPNLVSILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~---h~niv~~~g~~~~~~~~~lv~e~  105 (228)
                      +.-.+.|+.|....+|+...     .+..+++|...    ..+.+|.+.|+.+.   .-.+.++++........+++|||
T Consensus        38 i~~~~~l~gG~~n~~y~v~~-----~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND-----EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES-----SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred             eeeeEEeCCccceeeeEEEE-----CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence            44457789999999999764     45788888763    45788998888773   35677888887766678999999


Q ss_pred             ccccCCH
Q psy796          106 PAQLGDL  112 (228)
Q Consensus       106 ~~~~g~L  112 (228)
                      + ++..+
T Consensus       113 l-~G~~~  118 (312)
T 3jr1_A          113 L-NKSKN  118 (312)
T ss_dssp             C-CCCCC
T ss_pred             c-cCCCC
Confidence            9 86553

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=92.46  E-value=0.2  Score=41.16  Aligned_cols=70  Identities=11%  Similarity=0.082  Sum_probs=46.7

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch--------------HHHHHHHHHHhhCCC--C-CcceeeeeeeCCC
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------------GDSLREIRFLSSLQD--P-NLVSILGVCTGEQ   97 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------------~~~~~e~~~l~~l~h--~-niv~~~g~~~~~~   97 (228)
                      -.+.+|.|..+.||++....   .+..+++|...              ..+..|.+++..+..  + .+.+++.+  +.+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~---~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~  108 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE  108 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred             EEEECCCCceEEEEEEEECC---CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence            35678999999999996543   45789998531              335778888887632  2 34466654  344


Q ss_pred             CCeEEEeeccccC
Q psy796           98 PPWLVMEYPAQLG  110 (228)
Q Consensus        98 ~~~lv~e~~~~~g  110 (228)
                      ..+++||++ ++.
T Consensus       109 ~~~lvmE~l-~g~  120 (397)
T 2olc_A          109 MAVTVMEDL-SHL  120 (397)
T ss_dssp             TTEEEECCC-TTS
T ss_pred             ccEEEEEeC-CCc
Confidence            568999999 753

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=92.26  E-value=0.36  Score=37.10  Aligned_cols=74  Identities=15%  Similarity=0.081  Sum_probs=53.2

Q ss_pred             eccccee-eEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEEeeccccCCH
Q psy796           39 LGSCHLG-EMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVMEYPAQLGDL  112 (228)
Q Consensus        39 ig~G~fg-~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~e~~~~~g~L  112 (228)
                      +..|..| .||+-....   .+..+.+|.-.    .++.+|...|..+. +--+.++++++.+.+..+++||++ ++.++
T Consensus        32 ~~~G~S~~~v~rl~~~~---~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l-~G~~~  107 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKP---NAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI-PGKTA  107 (272)
T ss_dssp             EECSSSSCEEEEEECCT---TCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC-CSEEH
T ss_pred             ccCCCcCCeEEEEEecC---CCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee-CCccc
Confidence            3445444 578765543   56778898874    56788999988774 333568888888777889999999 98877


Q ss_pred             HHHh
Q psy796          113 VQHL  116 (228)
Q Consensus       113 ~~~l  116 (228)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            7654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.10  E-value=0.57  Score=36.58  Aligned_cols=73  Identities=18%  Similarity=0.068  Sum_probs=53.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCC---CcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDP---NLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~---niv~~~g~~~~~~~~~  100 (228)
                      ..+.-.+.+|.|..+.||+....    +++.|.+|...       ..+.+|+..|+.+...   -+.++++..    ..+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~----DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~   86 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELA----DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT   86 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEET----TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred             CCeEEEEecCCCCCeEEEEEEEC----CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence            34666788999999999999875    67899999863       3578899999887422   234555542    358


Q ss_pred             EEEeeccccCCH
Q psy796          101 LVMEYPAQLGDL  112 (228)
Q Consensus       101 lv~e~~~~~g~L  112 (228)
                      ++|||. ..+..
T Consensus        87 lv~e~l-~~~~~   97 (288)
T 3f7w_A           87 LAMEWV-DERPP   97 (288)
T ss_dssp             EEEECC-CCCCC
T ss_pred             EEEEee-cccCC
Confidence            999998 75543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=90.15  E-value=0.032  Score=47.33  Aligned_cols=56  Identities=13%  Similarity=0.061  Sum_probs=18.4

Q ss_pred             eeeeeecccceeeEEEEEEeccCCCceeEEe------ecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           34 RVLERLGSCHLGEMMICETEDIELDTEKVAV------RTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        34 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vav------K~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+.+.||   ||.||+|.+..   ....||+      |..+         ..+.+|+.+...++|+|+++.+++...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~---~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYK---KHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC------------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccc---cCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            3445566   99999999964   3467888      7664         236677888888899999999887643

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=89.03  E-value=0.87  Score=34.48  Aligned_cols=58  Identities=7%  Similarity=0.086  Sum_probs=39.5

Q ss_pred             CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhcc---------
Q psy796          129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKR---------  199 (228)
Q Consensus       129 ~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~---------  199 (228)
                      .+.+.=|||+|+++|..+-++ -++                          ..+..+++.+..||..|...         
T Consensus       113 ~te~~~IysLG~tLY~ALDyg-L~e--------------------------~eE~eLS~~LE~LL~~Mt~~~~d~~~~De  165 (229)
T 2yle_A          113 CMETEVIESLGIIIYKALDYG-LKE--------------------------NEERELSPPLEQLIDHMANTVEADGSNDE  165 (229)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTT-CCT--------------------------TEEECCCHHHHHHHHHHTTCCC-------
T ss_pred             chHHHHHHHHHHHHHHHhhcC-CCc--------------------------ccchhhCHHHHHHHHHHHhcccccccccc
Confidence            357778999999999988753 111                          12344566666666666544         


Q ss_pred             ----------------CCCCCCCHHHHHHH
Q psy796          200 ----------------DQTMRPTFKQIYSF  213 (228)
Q Consensus       200 ----------------~p~~Rps~~~v~~~  213 (228)
                                      .+..|+++++|++.
T Consensus       166 G~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~  195 (229)
T 2yle_A          166 GYEAAEEGLGDEDEKRKISAIRSYRDVMKL  195 (229)
T ss_dssp             -------------CCSCCCCCCSHHHHHHH
T ss_pred             cccccccccccccccccccCcCCHHHHHHH
Confidence                            34688999998864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=87.46  E-value=1.5  Score=34.50  Aligned_cols=72  Identities=17%  Similarity=0.160  Sum_probs=51.0

Q ss_pred             eeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCC---Ccceeeeeee-CCCCCeEEEe
Q psy796           34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDP---NLVSILGVCT-GEQPPWLVME  104 (228)
Q Consensus        34 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~---niv~~~g~~~-~~~~~~lv~e  104 (228)
                      .-.+.++.|....||+.        +..+++|.-.     ..+.+|.++|..+.+.   .+.+++.+.. .....+++|+
T Consensus        22 ~~v~~l~~G~~n~v~~v--------g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           22 QSVESLGEGFRNYAILV--------NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             SCEEEEEECSSEEEEEE--------TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeeeecCCCcceeEEEE--------CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence            34566788888899876        2456777653     4578999999988643   2456666654 3345689999


Q ss_pred             eccccCCHHH
Q psy796          105 YPAQLGDLVQ  114 (228)
Q Consensus       105 ~~~~~g~L~~  114 (228)
                      ++ +|.++.+
T Consensus        94 ~i-~G~~l~~  102 (306)
T 3tdw_A           94 KV-QGQILGE  102 (306)
T ss_dssp             CC-CSEECHH
T ss_pred             cc-CCeECch
Confidence            99 9877765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=84.84  E-value=1.2  Score=35.75  Aligned_cols=81  Identities=11%  Similarity=0.068  Sum_probs=54.4

Q ss_pred             ceeeeee-cccceeeEEEEEEeccCC---CceeEEeecch----------HHHHHHHHHHhhCCC---CCcceeeeeeeC
Q psy796           33 LRVLERL-GSCHLGEMMICETEDIEL---DTEKVAVRTCR----------GDSLREIRFLSSLQD---PNLVSILGVCTG   95 (228)
Q Consensus        33 ~~~~~~i-g~G~fg~V~~~~~~~~~~---~~~~vavK~~~----------~~~~~e~~~l~~l~h---~niv~~~g~~~~   95 (228)
                      +...+.| +.|..+.+|+........   .+..+++|...          ..+.+|+.++..+..   -.+.+++++..+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3445678 889999999876530000   15678888653          347889999888742   346678877755


Q ss_pred             CC---CCeEEEeeccccCCHHH
Q psy796           96 EQ---PPWLVMEYPAQLGDLVQ  114 (228)
Q Consensus        96 ~~---~~~lv~e~~~~~g~L~~  114 (228)
                      .+   ..+++|||+ +|.++.+
T Consensus       102 ~~~~g~~~~v~e~l-~G~~l~~  122 (357)
T 3ats_A          102 GDVLGTPFFLMDYV-EGVVPPD  122 (357)
T ss_dssp             STTTSSCEEEEECC-CCBCCCB
T ss_pred             CCccCCceEEEEec-CCCChhh
Confidence            43   468999999 8766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	228
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-16
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-14
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-14
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-14
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-14
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-14
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-13
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-13
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-12
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-10
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	8e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-06
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.002
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.004
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.003
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.003
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.003
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 3e-16
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 122 LTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK 181
             +D++ Y+ QS+V++F + L+E++      P+ ++ N   I     +  G         
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELM--TGQLPYSNINNRDQIIF--MVGRGYLSPDLSKV 234

Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            S CP+ +  LM +C K+ +  RP F QI + ++ 
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 17/103 (16%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFL 78
           IP   + V +R+GS   G +   +          VAV+     +           E+  L
Sbjct: 5   IPDGQITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVL 58

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
              +  N++  +G  T      +V ++  +   L  HL+  + 
Sbjct: 59  RKTRHVNILLFMGYST-APQLAIVTQW-CEGSSLYHHLHIIET 99

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 6e-15
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF + LWEI S  R  P+P +  + V+   E  Y        +  P  CP 
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 227

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y++M +CW  D  MRP+F Q+   ++ 
Sbjct: 228 AVYEVMKNCWHLDAAMRPSFLQLREQLEH 256

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQ 82
           +    L++L+ +G    G++M+ +         KVAV+  + D+     L E   ++ L+
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGD-----YRGNKVAVKCIKNDATAQAFLAEASVMTQLR 58

Query: 83  DPNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVT 141
             NLV +LGV    +   ++V EY    G LV +L S        D       +  F++ 
Sbjct: 59  HSNLVQLLGVIVEEKGGLYIVTEY-MAKGSLVDYLRSRGRSVLGGDC------LLKFSLD 111

Query: 142 LWEILSLCRDKPFPH 156
           + E +       F H
Sbjct: 112 VCEAMEYLEGNNFVH 126

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
              YT QS+VWS+ VT+WE+++    KP+  +   ++    E           LP+P +C
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGS-KPYDGIPASEISSILEKGER-------LPQPPIC 238

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             D+Y +M  CW  D   RP F+++     +
Sbjct: 239 TIDVYMIMVKCWMIDADSRPKFRELIIEFSK 269

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 18/132 (13%)

Query: 34  RVLERLGSCHLGEMMICE-TEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQDP 84
           + ++ LGS   G +       + E     VA++  R  +        L E   ++S+ +P
Sbjct: 12  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNP 71

Query: 85  NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWE 144
           ++  +LG+C       +    P   G L+ +        R+         + ++ V + +
Sbjct: 72  HVCRLLGICLTSTVQLITQLMP--FGCLLDY-------VREHKDNIGSQYLLNWCVQIAK 122

Query: 145 ILSLCRDKPFPH 156
            ++   D+   H
Sbjct: 123 GMNYLEDRRLVH 134

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 1e-14
 Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
             R+T +S+VWSF + L E+ +  R  P+P + N +V+   E  Y        +P P  C
Sbjct: 188 YGRFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPEC 239

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           P  ++DLMC CW+++   RPTF+ + +F++
Sbjct: 240 PESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 3e-08
 Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           IPR  LR+  +LG    GE+ +         T +VA++T +  +      L+E + +  L
Sbjct: 14  IPRESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGTMSPEAFLQEAQVMKKL 69

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVT 141
           +   LV +  V + E P ++V EY       +   +  D L  +  +Y     +   A  
Sbjct: 70  RHEKLVQLYAVVSEE-PIYIVTEY-------MSKGSLLDFLKGETGKYLRLPQLVDMAAQ 121

Query: 142 LWEILSLCRDKPFPH 156
           +   ++      + H
Sbjct: 122 IASGMAYVERMNYVH 136

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 3e-14
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWSF V +WE  S  + KP+  +   +V    E           +  P+ CPR
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEKGER-------MGCPAGCPR 237

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++YDLM  CW  D   RP F  +   ++
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 28  IPRYCLRVLER-LGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRF 77
           + R  L + ++ LGS + G +     +  ++  + VAV+  + ++         L E   
Sbjct: 3   LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVV-KTVAVKILKNEANDPALKDELLAEANV 61

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDR 126
           +  L +P +V ++G+C  E    LVME  A+LG L ++L    ++    
Sbjct: 62  MQQLDNPYIVRMIGICEAE-SWMLVMEM-AELGPLNKYLQQNRHVKDKN 108

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 4e-14
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           +++ +S+VWS+ VT+WE LS  + KP+  +   +V+   E           +  P  CP 
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPP 239

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y LM DCW      RP F  +   M+
Sbjct: 240 ELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 1e-06
 Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 19/138 (13%)

Query: 28  IPRYCLRVLER-LGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFL 78
           + R  L + +  LG  + G +        +     VA++  +  +        +RE + +
Sbjct: 5   LKRDNLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIM 63

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
             L +P +V ++GVC   +   LVME  A  G L + L         +      SNV   
Sbjct: 64  HQLDNPYIVRLIGVCQA-EALMLVMEM-AGGGPLHKFL-------VGKREEIPVSNVAEL 114

Query: 139 AVTLWEILSLCRDKPFPH 156
              +   +    +K F H
Sbjct: 115 LHQVSMGMKYLEEKNFVH 132

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 4e-14
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
             +++ +S++W+F V +WEI SL +  P+   TN +  ++             L +P L 
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSETAEHIAQGLR-------LYRPHLA 226

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYS 212
              +Y +M  CW      RPTFK + S
Sbjct: 227 SEKVYTIMYSCWHEKADERPTFKILLS 253

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 33  LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNL 86
           L  L+ LG+   G +   +          VA++  +  S      + E + + +L    L
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 61

Query: 87  VSILGVCTGEQPPWLVMEYPAQLGDLVQHLN 117
           V + GVCT ++P +++ EY A  G L+ +L 
Sbjct: 62  VQLYGVCTKQRPIFIITEYMAN-GCLLNYLR 91

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 7e-14
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T +S+VWSF + L EI++  R  P+P +TN +VIQN E  Y        + +P  CP 
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPE 237

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           ++Y LM  CWK     RPTF  + S ++
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 18/135 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           +PR  L+++ERLG+   GE+ +           KVAV++ +  S      L E   +  L
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNG----HTKVAVKSLKQGSMSPDAFLAEANLMKQL 65

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVT 141
           Q   LV +  V T ++P +++ EY  + G LV  L +   +    ++      +   A  
Sbjct: 66  QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGIKLTINK------LLDMAAQ 117

Query: 142 LWEILSLCRDKPFPH 156
           + E ++   ++ + H
Sbjct: 118 IAEGMAFIEERNYIH 132

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 7e-14
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            ++  S+ W F VTLWE+ +  + +P+  L   Q++   +           LP+P  CP+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ-EPWIGLNGSQILHKIDKEGE------RLPRPEDCPQ 242

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
           DIY++M  CW      RPTF  +  F+  +
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 5e-08
 Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 19/139 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRF 77
           I    LR+LE+LG    G +   E +     T  VAV+  + D           +RE+  
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWS 137
           + SL   NL+ + GV     P  +V E  A LG L+          R    +     +  
Sbjct: 65  MHSLDHRNLIRLYGVVL-TPPMKMVTEL-APLGSLLDR-------LRKHQGHFLLGTLSR 115

Query: 138 FAVTLWEILSLCRDKPFPH 156
           +AV + E +     K F H
Sbjct: 116 YAVQVAEGMGYLESKRFIH 134

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (162), Expect = 8e-14
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            ++++ +S+VW+F V LWEI +     P+P +   QV +  E  Y        + +P  C
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR-------MERPEGC 241

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           P  +Y+LM  CW+ + + RP+F +I+   + 
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           + R  + +  +LG    GE+     +     +  VAV+T + D+      L+E   +  +
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
           + PNLV +LGVCT E P +++ E+    G+L+ +L   +        
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYLRECNRQEVSAVV 116

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 9e-14
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            +RYT +S+VW++ V LWEI S     P+  + +E+VI               L  P  C
Sbjct: 216 YNRYTTESDVWAYGVVLWEIFSYGLQ-PYYGMAHEEVIYYVRDGNI-------LACPENC 267

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           P ++Y+LM  CW +    RP+F  I+  ++R
Sbjct: 268 PLELYNLMRLCWSKLPADRPSFCSIHRILQR 298

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 11/133 (8%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIEL--DTEKVAVRTCRGDS--------LREIRF 77
            PR  +  +  +G    G +       +        VAV+  + ++         RE   
Sbjct: 10  YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 69

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWS 137
           ++   +PN+V +LGVC   +P  L+ EY    GDL + L S    T     ++  S    
Sbjct: 70  MAEFDNPNIVKLLGVCAVGKPMCLLFEY-MAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 128

Query: 138 FAVTLWEILSLCR 150
            +      LS   
Sbjct: 129 VSSPGPPPLSCAE 141

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 1e-13
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T +S+VWSF V LWE+++     P+P +    +                L +P  CP 
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRR-------LLQPEYCPD 261

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y++M  CW     MRP+F ++ S +  
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 25  VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIR 76
           V+      +   E +G  H G +      D +      AV++    +        L E  
Sbjct: 21  VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 80

Query: 77  FLSSLQDPNLVSILGVCT-GEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNV 135
            +     PN++S+LG+C   E  P +V+ Y  + GDL        N  R+        ++
Sbjct: 81  IMKDFSHPNVLSLLGICLRSEGSPLVVLPY-MKHGDL-------RNFIRNETHNPTVKDL 132

Query: 136 WSFAVTLWEILSLCRDKPFPH 156
             F + + + +     K F H
Sbjct: 133 IGFGLQVAKGMKFLASKKFVH 153

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWS+ + +WE++S   ++P+  +TN+ VI   E  Y        LP P  CP 
Sbjct: 209 KFTSASDVWSYGIVMWEVMS-YGERPYWDMTNQDVINAIEQDYR-------LPPPMDCPS 260

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            ++ LM DCW++D+  RP F QI + + +
Sbjct: 261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           I   C+++ + +G+   GE+     +        VA++T +           L E   + 
Sbjct: 23  IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMG 82

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
               PN++ + GV T   P  ++ E+  + G L   
Sbjct: 83  QFDHPNVIHLEGVVTKSTPVMIITEF-MENGSLDSF 117

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 2e-13
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V LWEI +     P+P +  E++ +  +  +        + KPS C  
Sbjct: 213 IYTHQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTN 264

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++Y +M DCW    + RPTFKQ+   + R
Sbjct: 265 ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 3e-06
 Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 14/102 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICE----TEDIELDTEKVAVRTCRGDS--------LREI 75
           +PR  L + + LG    G++++ E     +D      KVAV+  + D+        + E+
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69

Query: 76  RFLSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
             +  +    N++++LG CT + P ++++EY ++ G+L ++L
Sbjct: 70  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK-GNLREYL 110

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 4e-13
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           RY+ +S+VWSF V +WE+ S  +  P+ + +N +V+++    +        L KP L   
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 229

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y +M  CWK     RP F ++   +  
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRLLRQLAE 258

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 6e-10
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 18/135 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
           I    L  ++ +GS   G + +       L+ +KVA++T R  +      + E   +  L
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLG----YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 57

Query: 82  QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVT 141
             P LV + GVC  + P  LV E+  + G L  +L +   L                 + 
Sbjct: 58  SHPKLVQLYGVCLEQAPICLVFEF-MEHGCLSDYLRTQRGLFAAETL-------LGMCLD 109

Query: 142 LWEILSLCRDKPFPH 156
           + E ++   +    H
Sbjct: 110 VCEGMAYLEEACVIH 124

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 7e-13
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
              YT +S+VWS+ + LWEI SL    P+P +  +          +       + +P   
Sbjct: 240 EGIYTIKSDVWSYGILLWEIFSLGV-NPYPGIPVDANFYKLIQNGF------KMDQPFYA 292

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
             +IY +M  CW  D   RP+F  + SF+ 
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 4e-09
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 12/102 (11%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCRGDS--------LREIRF 77
            PR  L   + LGS   G++M      I     + +VAV+  +  +        + E++ 
Sbjct: 34  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 93

Query: 78  LSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
           ++ L    N+V++LG CT   P +L+ EY    GDL+ +L S
Sbjct: 94  MTQLGSHENIVNLLGACTLSGPIYLIFEY-CCYGDLLNYLRS 134

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 9/99 (9%)

Query: 123 TRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP 182
           T     Y  +++VWS  +TL E+     + P   L   +V+               L +P
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMA--EIEPPHHELNPMRVLLKIAKSEP-----PTLAQP 238

Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTN 219
           S    +  D +  C +++   R T  Q+  + F+   +N
Sbjct: 239 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 20/146 (13%)

Query: 18  YKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------ 71
           Y+    D+ P   +   ++  LG    G++   + ++    +   A +     S      
Sbjct: 1   YEHVTRDLNPEDFW--EIIGELGDGAFGKVYKAQNKE---TSVLAAAKVIDTKSEEELED 55

Query: 72  -LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYT 130
            + EI  L+S   PN+V +L     E   W+++E+    G +   +        + +R  
Sbjct: 56  YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF-CAGGAVDAVML-------ELERPL 107

Query: 131 CQSNVWSFAVTLWEILSLCRDKPFPH 156
            +S +        + L+   D    H
Sbjct: 108 TESQIQVVCKQTLDALNYLHDNKIIH 133

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 4e-12
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            +T  S+VWSF V LWEI +L   +P+  L+NEQV++              L KP  CP 
Sbjct: 211 VFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQVLRFVMEGGL-------LDKPDNCPD 262

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +++LM  CW+ +  MRP+F +I S +K 
Sbjct: 263 MLFELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 13/141 (9%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCRGDS--------LREIRF 77
           + R  + +   LG    G +     + +  +    +VA++T    +        L E   
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 76

Query: 78  LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS--NV 135
           +      ++V +LGV +  QP  ++ME     GDL  +L S      +       S   +
Sbjct: 77  MKEFNCHHVVRLLGVVSQGQPTLVIMEL-MTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135

Query: 136 WSFAVTLWEILSLCRDKPFPH 156
              A  + + ++      F H
Sbjct: 136 IQMAGEIADGMAYLNANKFVH 156

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 5e-12
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT  S+VWS+ V LWEI+SL    P+  +T  ++ +     Y        L KP  C  
Sbjct: 202 VYTTNSDVWSYGVLLWEIVSLGGT-PYCGMTCAELYEKLPQGYR-------LEKPLNCDD 253

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           ++YDLM  CW+     RP+F QI   + R
Sbjct: 254 EVYDLMRQCWREKPYERPSFAQILVSLNR 282

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 4e-05
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 19/146 (13%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           +    ++  + +G  + G+++    +   L  +  A++  +  +          E+  L 
Sbjct: 7   LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMD-AAIKRMKEYASKDDHRDFAGELEVLC 65

Query: 80  SLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSN---- 134
            L   PN++++LG C      +L +EY A  G+L+  L  +  L  D       S     
Sbjct: 66  KLGHHPNIINLLGACEHRGYLYLAIEY-APHGNLLDFLRKSRVLETDPAFAIANSTASTL 124

Query: 135 ----VWSFAVTLWEILSLCRDKPFPH 156
               +  FA  +   +     K F H
Sbjct: 125 SSQQLLHFAADVARGMDYLSQKQFIH 150

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.6 bits (149), Expect = 6e-12
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 10/107 (9%)

Query: 122 LTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK 181
           L  D  +Y  + +VWS  +T  E+    R  P  ++     + +               +
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNES------PALQ 235

Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTNYKSNLDL 226
                    + +  C ++    RPT + +  + F+ R       +DL
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDL 282

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 22/138 (15%)

Query: 29  PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFL 78
           P      L  +G    G +          ++E VA++                ++E+RFL
Sbjct: 13  PEKLFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
             L+ PN +   G    E   WLVMEY                L            + + 
Sbjct: 70  QKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVE--------IAAV 120

Query: 139 AVTLWEILSLCRDKPFPH 156
                + L+        H
Sbjct: 121 THGALQGLAYLHSHNMIH 138

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-11
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           ++T  S+VWSF + +WE+++   ++P+  L+N +V++     +        LP P  CP 
Sbjct: 189 KFTSASDVWSFGIVMWEVMT-YGERPYWELSNHEVMKAINDGFR-------LPTPMDCPS 240

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            IY LM  CW++++  RP F  I S + +
Sbjct: 241 AIYQLMMQCWQQERARRPKFADIVSILDK 269

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 17/138 (12%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTE-KVAVRTCRGDS--------LREIRFL 78
           I   C+   + +G+   GE+     +      E  VA++T +           L E   +
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

Query: 79  SSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
                 N++ + GV +  +P  ++ EY            + D   R++D       +   
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEY--------MENGALDKFLREKDGEFSVLQLVGM 115

Query: 139 AVTLWEILSLCRDKPFPH 156
              +   +    +  + H
Sbjct: 116 LRGIAAGMKYLANMNYVH 133

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
           R+T  S+VW F V +WEIL +   KPF  + N  VI   E+          LP P  CP 
Sbjct: 185 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGER-------LPMPPNCPP 236

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
            +Y LM  CW  D + RP F ++ + +  
Sbjct: 237 TLYSLMTKCWAYDPSRRPRFTELKAQLST 265

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLS 79
           I R  + +   +G    G++        E     VA++TC+  +        L+E   + 
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63

Query: 80  SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
               P++V ++GV T E P W++ME    LG+L   
Sbjct: 64  QFDHPHIVKLIGVIT-ENPVWIIMEL-CTLGELRSF 97

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 9/103 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           R  Y  + ++WS  +   E++    + P+ +    + +               L  P   
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMI--EGEPPYLNENPLRALYLIAT-----NGTPELQNPEKL 242

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTNYKSNLDL 226
                D +  C   D   R + K++  + F+K +    S   L
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 15/120 (12%)

Query: 20  CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-------L 72
              GD  P  +Y     E++G    G +            ++VA+R             +
Sbjct: 13  VSVGD--PKKKY--TRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELII 65

Query: 73  REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
            EI  +   ++PN+V+ L         W+VMEY    G L   +               +
Sbjct: 66  NEILVMRENKNPNIVNYLDSYLVGDELWVVMEY-LAGGSLTDVVTETCMDEGQIAAVCRE 124

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 2e-11
 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            D  +  +++WS    ++ +L      PF   TN+Q+I+N  +     E           
Sbjct: 177 HDVVSTATDMWSLGTLVYVLL--SGINPFLAETNQQIIENIMN----AEYTFDEEAFKEI 230

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTNYKSNLDLR 227
             +  D +     +++  R T  +   + ++K+     S   +R
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIR 274

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQD 83
           +Y   + E LG    G +  C         +    +  +          +EI  L+  + 
Sbjct: 6   KY--MIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
            N++ +       +   ++ E+     D+ + +N+
Sbjct: 61  RNILHLHESFESMEELVMIFEF-ISGLDIFERINT 94

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 3e-11
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT +S+VWS+ + LWE+ SL          + +  +  +  +        +  P   P 
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-------MLSPEHAPA 275

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR----STN 219
           ++YD+M  CW  D   RPTFKQI   +++    STN
Sbjct: 276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 1e-10
 Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 12/135 (8%)

Query: 28  IPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCRGDS--------LREIRF 77
            PR  L   + LG+   G+++      +        VAV+  +  +        + E++ 
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 78  LSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
           LS L +  N+V++LG CT   P  ++ EY    GDL+  L    +               
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEY-CCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 137 SFAVTLWEILSLCRD 151
             A+ L ++LS    
Sbjct: 139 ELALDLEDLLSFSYQ 153

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (142), Expect = 4e-11
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           +R  Y  +S++WS    L+E+       PF   + +++               F   P  
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELC--ALMPPFTAFSQKELAGKIRE-------GKFRRIPYR 237

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQI 210
              ++ +++          RP+ ++I
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEI 263

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 4e-06
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 15/95 (15%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSSLQDP 84
            VL  +G+   G       +    D + +  +     S         + E+  L  L+ P
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 85  NLVSILGVCTGE--QPPWLVMEYPAQLGDLVQHLN 117
           N+V              ++VMEY  + GDL   + 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEY-CEGGDLASVIT 97

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (141), Expect = 5e-11
 Identities = 33/275 (12%), Positives = 74/275 (26%), Gaps = 98/275 (35%)

Query: 30  RYCL---RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIR 76
           ++ L    +   LG    G + +   +        +A++      L          RE+ 
Sbjct: 2   QWALEDFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVE 58

Query: 77  FLSSLQDPNLVSILGVCTGEQ------------------------PPWLVMEYPAQLGDL 112
             S L+ PN++ + G                                     Y  +L + 
Sbjct: 59  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 118

Query: 113 VQHLNSADNLTRD----------------------------------------------R 126
           + + +S   + RD                                               
Sbjct: 119 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 178

Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
             +  + ++WS  V  +E L      PF   T ++  +           +V    P    
Sbjct: 179 RMHDEKVDLWSLGVLCYEFL--VGKPPFEANTYQETYKRI--------SRVEFTFPDFVT 228

Query: 187 RDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTN 219
               DL+    K + + RP  +++  + ++  +++
Sbjct: 229 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 263

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 6e-11
 Identities = 10/85 (11%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            ++Y    +V++F + + E+     + P+    N   I                    + 
Sbjct: 186 EEKYDESVDVYAFGMCMLEMA--TSEYPYSECQNAAQIYRRVT-----SGVKPASFDKVA 238

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI 210
             ++ +++  C ++++  R + K +
Sbjct: 239 IPEVKEIIEGCIRQNKDERYSIKDL 263

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 6e-05
 Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 18/116 (15%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL---------REIRFLSS 80
           R+ L+    +G      +      +    T +VA    +   L          E   L  
Sbjct: 9   RF-LKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKG 64

Query: 81  LQDPNLVSILGVC----TGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
           LQ PN+V           G++   LV E     G L  +L     +     R  C+
Sbjct: 65  LQHPNIVRFYDSWESTVKGKKCIVLVTEL-MTSGTLKTYLKRFKVMKIKVLRSWCR 119

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 6e-11
 Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 12/109 (11%)

Query: 120 DNLTRDRDRYTCQSNVWSFAVTLWEILSLCR------DKPFPHLTNEQVIQNAEHMYYGG 173
           D++         ++++++  +  WEI   C       D   P+        + E M    
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245

Query: 174 ELQVFLPK------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
             Q   P            R +  +M +CW  +   R T  +I   + +
Sbjct: 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 17/134 (12%)

Query: 33  LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR------EIRFLSSLQDPNL 86
           + + E +G    GE+   +        E+VAV+       R      EI     L+  N+
Sbjct: 5   IVLQESIGKGRFGEVWRGK-----WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59

Query: 87  VSILGVCTGEQPP----WLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
           +  +     +       WLV +Y  + G L  +LN          +    +     A   
Sbjct: 60  LGFIAADNKDNGTWTQLWLVSDY-HEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLH 117

Query: 143 WEILSLCRDKPFPH 156
            EI+         H
Sbjct: 118 MEIVGTQGKPAIAH 131

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.9 bits (139), Expect = 9e-11
 Identities = 9/88 (10%), Positives = 21/88 (23%), Gaps = 2/88 (2%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             + + ++ S    L          P+  L      Q  E +                P 
Sbjct: 189 EQSRRDDLESLGYVLMYFN--LGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 246

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
           +    +  C       +P +  +    +
Sbjct: 247 EFATYLNFCRSLRFDDKPDYSYLRQLFR 274

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 1e-10
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
            YT QS+VWSF V LWEI SL    P+P +  ++                 +  P     
Sbjct: 212 VYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLKE------GTRMRAPDYTTP 264

Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
           ++Y  M DCW  + + RPTF ++
Sbjct: 265 EMYQTMLDCWHGEPSQRPTFSEL 287

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 56.2 bits (135), Expect = 4e-10
 Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           +   Y  + ++WS  V ++ +L      PF H     +++        G  Q   P+   
Sbjct: 188 NHPGYGKEVDMWSTGVIMYTLL--AGSPPFWHRKQMLMLRMIMS----GNYQFGSPEWDD 241

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYS--FMKR 216
               + DL+          R T ++  +  F ++
Sbjct: 242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 58  DTEKVAVRTCRGDSLREIRFLSSLQD-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
                 V+  R  +L+E+  L  +   PN++ +          +LV +   + G+L  +L
Sbjct: 43  SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL-MKKGELFDYL 101

Query: 117 NSADNLTRDRDRY 129
                L+    R 
Sbjct: 102 TEKVTLSEKETRK 114

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 56.2 bits (135), Expect = 5e-10
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           DR+     +++W+  V  + +L      PF    + + +QN +      + +      S 
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLL--SGLSPFAGEDDLETLQNVKR----CDWEFDEDAFSS 254

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQI 210
              +  D + +  +++   R T    
Sbjct: 255 VSPEAKDFIKNLLQKEPRKRLTVHDA 280

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-------LREIRFLSSLQDPNL 86
            +LE LGS   G +  C  +           +               EI  ++ L  P L
Sbjct: 32  DILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 87  VSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
           +++      +    L++E+    G+L   +
Sbjct: 89  INLHDAFEDKYEMVLILEF-LSGGELFDRI 117

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.0 bits (134), Expect = 5e-10
 Identities = 9/89 (10%), Positives = 22/89 (24%), Gaps = 2/89 (2%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
             + + ++ +        L      P+  L      Q  E +    +        +  P 
Sbjct: 189 EQSRRDDLEALGHVFMYFL--RGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPE 246

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
           + Y  M           P +  +     +
Sbjct: 247 EFYKYMHYARNLAFDATPDYDYLQGLFSK 275

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-09
 Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            ++Y    ++WS  V ++ +L  C   PF       +    +     G+ +   P+ S  
Sbjct: 187 PEKYDKSCDMWSLGVIMYILL--CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTN 219
             ++  L+ +  K + T R T  +   + ++ +ST 
Sbjct: 245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 280

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 14/104 (13%)

Query: 60  EKVAVRTCRGDS--LREIRFLSSLQD-PNLVSILGVC----TGEQPPWLVMEYPAQLGDL 112
           EK A++  +      RE+         P++V I+ V      G +   +VME     G+L
Sbjct: 38  EKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC-LDGGEL 96

Query: 113 VQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH 156
              +    +                   ++ E +         H
Sbjct: 97  FSRIQDRGDQAFTERE------ASEIMKSIGEAIQYLHSINIAH 134

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 8/102 (7%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
           +  Y+   + WS  V  + +L  C   PF    + ++ +         E +   P     
Sbjct: 183 QKPYSKAVDCWSIGVIAYILL--CGYPPFYDENDAKLFEQILK----AEYEFDSPYWDDI 236

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI--YSFMKRSTNYKSNLD 225
                D +    ++D   R T +Q   + ++   T    N+ 
Sbjct: 237 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 278

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.3 bits (125), Expect = 8e-09
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 13/108 (12%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL--------REIRFLSSLQDPN 85
              + LG+    E+++ E  D     + VA++     +L         EI  L  ++ PN
Sbjct: 12  DFRDVLGTGAFSEVILAE--DKRTQ-KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 68

Query: 86  LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLT-RDRDRYTCQ 132
           +V++  +       +L+M+     G+L   +      T RD  R   Q
Sbjct: 69  IVALDDIYESGGHLYLIMQL-VSGGELFDRIVEKGFYTERDASRLIFQ 115

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.2 bits (127), Expect = 6e-09
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
           +       +++WS  V  + +L      PF    +++ ++N +      +  +     S 
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILL--SGLSPFGGENDDETLRNVKS----CDWNMDDSAFSG 251

Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQI 210
              D  D +      D   R T  Q 
Sbjct: 252 ISEDGKDFIRKLLLADPNTRMTIHQA 277

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 50.1 bits (119), Expect = 6e-08
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-------LREIRFLSSLQ 82
            Y   + E LG+   G +               A +              +EI+ +S L+
Sbjct: 27  HY--DIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 81

Query: 83  DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
            P LV++      +    ++ E+    G+L + +    N
Sbjct: 82  HPTLVNLHDAFEDDNEMVMIYEF-MSGGELFEKVADEHN 119

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 7e-09
 Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            +    ++++WS  V  + +L      PF   T ++ + N          +      S  
Sbjct: 190 YEPLGLEADMWSIGVITYILL--SGASPFLGDTKQETLANVSA----VNYEFEDEYFSNT 243

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQI 210
                D +     +D   R T +  
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDS 268

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 5e-06
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 18/89 (20%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-------------LREIR 76
            Y     E LGS     +  C  +       + A +  +                 RE+ 
Sbjct: 11  YY--DTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 77  FLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
            L  +Q PN++++  V   +    L++E 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILEL 94

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 13/108 (12%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQDPN 85
             +  LG+ + G +     +        +A +    +         +RE++ L     P 
Sbjct: 9   EKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65

Query: 86  LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLT-RDRDRYTCQ 132
           +V   G    +    + ME+    G L Q L  A  +  +   + +  
Sbjct: 66  IVGFYGAFYSDGEISICMEH-MDGGSLDQVLKKAGRIPEQILGKVSIA 112

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 40/128 (31%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------------ 175
            Y+ QS++WS  ++L E+       P P    +++         G               
Sbjct: 179 HYSVQSDIWSMGLSLVEM--AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236

Query: 176 -------------------QVFLPKPSLCPRDIY-----DLMCDCWKRDQTMRPTFKQI- 210
                               +    P   P  ++     D +  C  ++   R   KQ+ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296

Query: 211 -YSFMKRS 217
            ++F+KRS
Sbjct: 297 VHAFIKRS 304

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 36/266 (13%), Positives = 66/266 (24%), Gaps = 100/266 (37%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFLS 79
           RY   + E LG   + E+ +    D+ L    VAV+  R D            RE +  +
Sbjct: 8   RY--ELGEILGFGGMSEVHLAR--DLRLH-RDVAVKVLRADLARDPSFYLRFRREAQNAA 62

Query: 80  SLQDPNLVSILGVCT----------------------------GEQPPWLVMEYPAQLGD 111
           +L  P +V++                                 G   P   +E  A    
Sbjct: 63  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122

Query: 112 LVQHLNSADNLTRD---------------------------------------------- 125
            +   +    + RD                                              
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 126 -----RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP 180
                 D    +S+V+S    L+E+  L  + PF   +   V           +      
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEV--LTGEPPFTGDSPVSVAYQHVR----EDPIPPSA 236

Query: 181 KPSLCPRDIYDLMCDCWKRDQTMRPT 206
           +      D+  ++     ++   R  
Sbjct: 237 RHEGLSADLDAVVLKALAKNPENRYQ 262

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
             +Y    + WSF V L+E+L      PF     E++  +                P   
Sbjct: 177 GQKYNHSVDWWSFGVLLYEML--IGQSPFHGQDEEELFHSIRMDNP--------FYPRWL 226

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQ 209
            ++  DL+   + R+   R   + 
Sbjct: 227 EKEAKDLLVKLFVREPEKRLGVRG 250

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 15/107 (14%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFLS-SLQ 82
            + + LG    G++ + E +      +  A++  + D           + E R LS + +
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 83  DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRY 129
            P L  +      ++  + VMEY    GDL+ H+ S       R  +
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEY-LNGGDLMYHIQSCHKFDLSRATF 107

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 7/87 (8%)

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS 183
           + R+ +    +VWS  + L  +L+       P  + ++     E        + +L    
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-------KTYLNPWK 230

Query: 184 LCPRDIYDLMCDCWKRDQTMRPTFKQI 210
                   L+      + + R T   I
Sbjct: 231 KIDSAPLALLHKILVENPSARITIPDI 257

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 5e-06
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 11/80 (13%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLSSLQDPN 85
            +++ LG    GE+ +          E VAV+               +EI     L   N
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 86  LVSILGVCTGEQPPWLVMEY 105
           +V   G        +L +EY
Sbjct: 65  VVKFYGHRREGNIQYLFLEY 84

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 10/86 (11%)

Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
                S++W+    +++++      PF       + Q    + Y          P     
Sbjct: 186 SACKSSDLWALGCIIYQLV--AGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFP 235

Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSF 213
              DL+      D T R   +++  +
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGY 261

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 14/106 (13%), Positives = 38/106 (35%), Gaps = 14/106 (13%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQD 83
           +  + LG      +++         + + A++      +          RE   +S L  
Sbjct: 11  KFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRY 129
           P  V +      ++  +  + Y A+ G+L++++    +      R+
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSY-AKNGELLKYIRKIGSFDETCTRF 112

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 35/255 (13%), Positives = 70/255 (27%), Gaps = 92/255 (36%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQD 83
           ++L  LG+   G + +  +     +    A++  + + +           E   LS +  
Sbjct: 7   QILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 84  PNLVSILGVCTGEQ------------------------PPWLVMEYPAQLGDLVQHLNSA 119
           P ++ + G     Q                        P  +   Y A++   +++L+S 
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123

Query: 120 DNLTRD---------------------------------------------RDRYTCQSN 134
           D + RD                                                Y    +
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID 183

Query: 135 VWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMC 194
            WSF + ++E+L      PF      +  +   +             P     D+ DL+ 
Sbjct: 184 WWSFGILIYEML--AGYTPFYDSNTMKTYEKILNAEL--------RFPPFFNEDVKDLLS 233

Query: 195 DCWKRDQTMRPTFKQ 209
               RD + R    Q
Sbjct: 234 RLITRDLSQRLGNLQ 248

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 11/104 (10%), Positives = 24/104 (23%), Gaps = 21/104 (20%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN-------------------A 166
           +  Y    ++WS      E+    R   F   ++   +                      
Sbjct: 189 QSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 246

Query: 167 EHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
              ++    Q      +       DL+  C   +   R +    
Sbjct: 247 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 31/189 (16%)

Query: 35  VLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------------LREIRFLSSLQ 82
            L+ LG      +     ++     + VA++  +               LREI+ L  L 
Sbjct: 2   KLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 58

Query: 83  DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
            PN++ +L     +    LV ++     +++   NS          Y            L
Sbjct: 59  HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYL 116

Query: 143 WEILSLCRD-KPFPHLTNE-------------QVIQNAEHMYYGGELQVFLPKPSLCPRD 188
            +   L RD KP   L +E                       +    + +     L    
Sbjct: 117 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR 176

Query: 189 IYDLMCDCW 197
           +Y +  D W
Sbjct: 177 MYGVGVDMW 185

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 15/102 (14%), Positives = 28/102 (27%), Gaps = 22/102 (21%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL---- 184
           Y    ++W+    L E+L   R    P  ++   +            + +    SL    
Sbjct: 178 YGVGVDMWAVGCILAELL--LRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 185 ----------------CPRDIYDLMCDCWKRDQTMRPTFKQI 210
                              D+ DL+   +  +   R T  Q 
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 19/136 (13%)

Query: 29  PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--------LREIRFLSS 80
           PRY    L  +G    G +          +  +VA++              LREI+ L  
Sbjct: 8   PRY--TNLSYIGEGAYGMVCSAYDNV---NKVRVAIKKISPFEHQTYCQRTLREIKILLR 62

Query: 81  LQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAV 140
            +  N++ I  +        +   Y      LV HL  AD     + ++    ++  F  
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVY------LVTHLMGADLYKLLKTQHLSNDHICYFLY 116

Query: 141 TLWEILSLCRDKPFPH 156
            +   L         H
Sbjct: 117 QILRGLKYIHSANVLH 132

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 14/81 (17%), Positives = 22/81 (27%), Gaps = 6/81 (7%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +    + WS  V ++E+L      PF     +             E     P P      
Sbjct: 209 HDKAVDWWSLGVLMYELL--TGASPFTVDGEKNSQAEISRRILKSEP----PYPQEMSAL 262

Query: 189 IYDLMCDCWKRDQTMRPTFKQ 209
             DL+     +D   R     
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGP 283

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL-----------REIRFLSSLQ 82
            +L+ LG+   G++ +          +  A++  +  ++            E + L  ++
Sbjct: 27  ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 86

Query: 83  D-PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTC 131
             P LV++      E    L+++Y    G+L  HL+  +  T    +   
Sbjct: 87  QSPFLVTLHYAFQTETKLHLILDYI-NGGELFTHLSQRERFTEHEVQIYV 135

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.0 bits (103), Expect = 7e-06
 Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 7/83 (8%)

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS 183
           +    Y   ++ +S    L+++L      PF     +   +              +  P 
Sbjct: 178 QKGVAYDSSADWFSLGCMLFKLL--RGHSPFRQHKTKDKHEIDRMTLTM-----AVELPD 230

Query: 184 LCPRDIYDLMCDCWKRDQTMRPT 206
               ++  L+    +RD   R  
Sbjct: 231 SFSPELRSLLEGLLQRDVNRRLG 253

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 9/84 (10%)

Query: 73  REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
             +  +S+   P +V +            +++     GDL  HL+        +     +
Sbjct: 56  IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL-MNGGDLHYHLS--------QHGVFSE 106

Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
           +++  +A  +   L    ++   +
Sbjct: 107 ADMRFYAAEIILGLEHMHNRFVVY 130

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 8e-06
 Identities = 35/187 (18%), Positives = 57/187 (30%), Gaps = 27/187 (14%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSSLQDP 84
           + +E++G    G +     +      E VA++  R D+         +REI  L  L  P
Sbjct: 5   QKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 85  NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWE 144
           N+V +L V   E   +LV E+  Q        ++   +     +      +   A     
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHS 120

Query: 145 ILSLCRD-KPFPHLTNEQ-------------VIQNAEHMYYGGELQVFLPKPSLCPRDIY 190
              L RD KP   L N +                      +      +     L     Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180

Query: 191 DLMCDCW 197
               D W
Sbjct: 181 STAVDIW 187

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 15/113 (13%), Positives = 28/113 (24%), Gaps = 23/113 (20%)

Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
           A  +      Y+   ++WS      E++   R   FP  +    +          +  V+
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMV--TRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227

Query: 179 LPKPSL---------------------CPRDIYDLMCDCWKRDQTMRPTFKQI 210
               S+                        D   L+      D   R + K  
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 37/191 (19%), Positives = 56/191 (29%), Gaps = 30/191 (15%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSS 80
           +Y    LE++G    G +   +  +     E VA++  R D          LREI  L  
Sbjct: 3   KY--EKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKE 57

Query: 81  LQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAV 140
           L+  N+V +  V   ++   LV E+  Q         + D        +  Q  +     
Sbjct: 58  LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ--LLKGLG 115

Query: 141 TLWEILSLCRD-KPFPHLTNE-------------QVIQNAEHMYYGGELQVFLPKPSLCP 186
                  L RD KP   L N                               + P   L  
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175

Query: 187 RDIYDLMCDCW 197
             +Y    D W
Sbjct: 176 AKLYSTSIDMW 186

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.003
 Identities = 11/108 (10%), Positives = 27/108 (25%), Gaps = 22/108 (20%)

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYG----------- 172
                Y+   ++WS      E+ +  R   FP    +  ++    +              
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGR-PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232

Query: 173 ----------GELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
                           +           DL+ +  K +   R + ++ 
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
            + Y    + W   V ++E++  C   PF +  +E++ +          L   +  P   
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHERLFELI--------LMEEIRFPRTL 228

Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQ 209
             +   L+    K+D   R     
Sbjct: 229 SPEAKSLLAGLLKKDPKQRLGGGP 252

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 34  RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----------LREIRFLSSLQD 83
             L+ LG    G++++   +         A++  R +           + E R L + + 
Sbjct: 8   DYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 84  PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLW 143
           P L ++            VMEY    G+L  HL+     T +R           +   + 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANG-GELFFHLSRERVFTEER--------ARFYGAEIV 115

Query: 144 EILSLCRDKPFPH 156
             L     +   +
Sbjct: 116 SALEYLHSRDVVY 128

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 16/82 (19%)

Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
           +   + VWS  + L++++  C D PF H  +E++I+              +        +
Sbjct: 187 HGRSAAVWSLGILLYDMV--CGDIPFEH--DEEIIRGQ------------VFFRQRVSSE 230

Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
              L+  C     + RPTF++I
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEI 252

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 28/142 (19%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL-------------REIR 76
           +Y  +V   LGS   G +          D   VA++    D +              E+ 
Sbjct: 5   QY--QVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 59

Query: 77  FLSSLQD--PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSN 134
            L  +      ++ +L          L++E P  + DL   +     L  +         
Sbjct: 60  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------- 111

Query: 135 VWSFAVTLWEILSLCRDKPFPH 156
             SF   + E +  C +    H
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLH 133

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 31/191 (16%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSS 80
           +Y    LE++G    G +   +        E  A++  R +          +REI  L  
Sbjct: 3   KY--HGLEKIGEGTYGVVYKAQNNY----GETFALKKIRLEKEDEGIPSTTIREISILKE 56

Query: 81  LQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAV 140
           L+  N+V +  V   ++   LV E+     DL + L+  +         +    + +   
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114

Query: 141 TLWEILSLCRD-KPFPHLTNEQ-------------VIQNAEHMYYGGELQVFLPKPSLCP 186
              +   L RD KP   L N +                      +      +     L  
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174

Query: 187 RDIYDLMCDCW 197
              Y    D W
Sbjct: 175 SKKYSTTIDIW 185

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 19/108 (17%), Positives = 30/108 (27%), Gaps = 23/108 (21%)

Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN----------------AE 167
               +Y+   ++WS      E++       FP ++    +                   E
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMV--NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230

Query: 168 HMYYGGELQVFLPKP-----SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
              Y     V+ P P             DL+    K D   R T KQ 
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 33/193 (17%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSS 80
            Y  R L+ +GS   G +             KVA++                RE+R L  
Sbjct: 19  VY--RDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKH 73

Query: 81  LQDPNLVSILGVCTGEQPP------WLVMEYPAQLGDLVQHLNSADNLTRDRDRY----- 129
           ++  N++ +L V T ++        +LVM +   +G  +  L   + L  DR ++     
Sbjct: 74  MRHENVIGLLDVFTPDETLDDFTDFYLVMPF---MGTDLGKLMKHEKLGEDRIQFLVYQM 130

Query: 130 -----TCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL 184
                   +            L++  D     L      Q    M      + +     +
Sbjct: 131 LKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVI 190

Query: 185 CPRDIYDLMCDCW 197
                Y    D W
Sbjct: 191 LNWMRYTQTVDIW 203

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 4e-04
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 19/136 (13%)

Query: 30  RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRFLSS 80
           RY  + L  +GS   G +             +VAV+                RE+R L  
Sbjct: 19  RY--QNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH 73

Query: 81  LQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAV 140
           ++  N++ +L V T  +      +       LV HL  AD     + +     +V     
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDV-----YLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128

Query: 141 TLWEILSLCRDKPFPH 156
            +   L         H
Sbjct: 129 QILRGLKYIHSADIIH 144

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 19/113 (16%), Positives = 28/113 (24%), Gaps = 23/113 (20%)

Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHM--------- 169
           A  L      YT   +VWS    L E+  L     FP  +    +     +         
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247

Query: 170 ------YYGGELQVFLPKP------SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
                 Y   +       P         P +   L     +   T R T  + 
Sbjct: 248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 19/108 (17%)

Query: 60  EKVAVRTCRGDS---LREIRFLSSLQDPNLVSILGVCTGEQPP------WLVMEY--PAQ 108
           E VA++    D     RE++ +  L   N+V +                 LV++Y     
Sbjct: 46  ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV 105

Query: 109 LGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPH 156
                 +  +   L            V  +   L+  L+        H
Sbjct: 106 YRVARHYSRAKQTLPVIY--------VKLYMYQLFRSLAYIHSFGICH 145

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 7e-04
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 23/123 (18%)

Query: 27  PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS---------LREIRF 77
            + +Y    L ++G    GE+            +KVA++    ++         LREI+ 
Sbjct: 8   EVSKY--EKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKI 62

Query: 78  LSSLQDPNLVSILGVCTGEQPP--------WLVMEYPAQLGDLVQHLNSADNLTRDRDRY 129
           L  L+  N+V+++ +C  +  P        +LV ++  +        N     T    + 
Sbjct: 63  LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKFTLSEIKR 121

Query: 130 TCQ 132
             Q
Sbjct: 122 VMQ 124

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	228
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.98
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.89
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.04
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	90.8
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	83.79

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=263.45  Aligned_cols=178  Identities=30%  Similarity=0.572  Sum_probs=156.4

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      |++++|++.+.||+|+||.||+|.+.    ++..||||.++      +++.+|++++.+++||||++++|++..++..++
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEET----TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEEC----CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEE
Confidence            67789999999999999999999985    56789999984      678999999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      ||||+ ++|+|.+++...                              |||+                            
T Consensus        78 v~E~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          78 VFEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             EEECC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred             EEEec-CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence            99999 999999988654                              4444                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       +....++.++|||||||++|||+|+ +.+||...+..++...+..+.       +...|..++
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~-~~~~~~~~~~~~~~~~i~~~~-------~~~~p~~~~  228 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGF-------RLYKPRLAS  228 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTT-SCCTTCSCCHHHHHHHHHHTC-------CCCCCTTSC
T ss_pred             eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHC-CCCCCCCCCHHHHHHHHHhcC-------CCCCccccC
Confidence                             4556789999999999999999996 367888888888877776643       455677889


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +++.+|+.+||+.+|++|||+++|+++|+++.
T Consensus       229 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999984

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.1e-40  Score=263.85  Aligned_cols=183  Identities=30%  Similarity=0.600  Sum_probs=159.0

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|+|++++|++.+.||+|+||.||+|.+..   .++.||||.++      +.+.+|++++++++||||++++|++.+.+
T Consensus        10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_          10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             CTTBCCGGGEEEEEETTTTTTSSEEEEEEGG---GTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccEecHHHeEEeeEEeeCCCeEEEEEEECC---CCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            5799999999999999999999999999876   68899999984      66899999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-------------------------------Cccc-----------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-----------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-----------------------  123 (228)
                      ..+++|||| ++|+|.+++...                               |||+                       
T Consensus        87 ~~~iv~E~~-~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_          87 PFYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             SCEEEEECC-TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred             eeEEEeecc-cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeec
Confidence            999999999 999999998643                               4554                       


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +....++.++|||||||++|||+++ +.+||.+.+..++...+....       .++.
T Consensus       166 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~-~~p~~~~~~~~~~~~~i~~~~-------~~~~  237 (287)
T d1opja_         166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDY-------RMER  237 (287)
T ss_dssp             CSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT-SCCSSTTCCHHHHHHHHHTTC-------CCCC
T ss_pred             CCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhC-CCCCCCcchHHHHHHHHhcCC-------CCCC
Confidence                                  4556789999999999999999996 356677777776666554432       4556


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      |..+++++.+|+.+||+.||.+|||+.+|++.|+.+.
T Consensus       238 ~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            7789999999999999999999999999999998873

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-40  Score=260.77  Aligned_cols=181  Identities=35%  Similarity=0.623  Sum_probs=155.5

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .++|+|++++|++.+.||+|+||.||+|.++    .+..||||.++      +.+.+|++++.+++||||++++|++.+ 
T Consensus         5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-   79 (272)
T d1qpca_           5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-   79 (272)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             CCCeecCHHHeEEeEEEecCCCcEEEEEEEC----CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-
Confidence            5789999999999999999999999999975    56889999984      568999999999999999999998854 


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------  123 (228)
                      +..++||||+ ++|+|.+++...                               |||+                      
T Consensus        80 ~~~~iv~Ey~-~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          80 EPIYIITEYM-ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             SSCEEEEECC-TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCeEEEEEeC-CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEE
Confidence            4679999999 999999876533                               4554                      


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             +....++.++|||||||++|||+|+ +.+||...+..++...+..+.       +++
T Consensus       159 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~-~~~~~~~~~~~~~~~~i~~~~-------~~~  230 (272)
T d1qpca_         159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGY-------RMV  230 (272)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------CCC
T ss_pred             ccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcC-------CCC
Confidence                                   3345689999999999999999996 357777777777777765542       455


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .|..+++++.+|+.+||+.+|++|||+++|++.|+.+
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            6788999999999999999999999999999999887

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-40  Score=260.61  Aligned_cols=179  Identities=31%  Similarity=0.618  Sum_probs=155.4

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcceeeeeeeCC-CCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLVSILGVCTGE-QPP   99 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   99 (228)
                      |+|+.++|++++.||+|+||.||+|.+     .+..||||.++     +.+.+|++++++++||||++++|++.+. +..
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~   76 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   76 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE-----CCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcE
Confidence            889999999999999999999999998     56789999994     6689999999999999999999998654 568


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      ++||||+ ++|+|.++|...                               +||+                         
T Consensus        77 ~lv~ey~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          77 YIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             EEEECCC-TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             EEEEecc-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC
Confidence            9999999 999999998643                               3333                         


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      ..+..++.++||||||+++|||+|+ +.+||...+..++...+....       +++.|..+++
T Consensus       156 ~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~-~~~p~~~~~~~~~~~~i~~~~-------~~~~~~~~~~  227 (262)
T d1byga_         156 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF-GRVPYPRIPLKDVVPRVEKGY-------KMDAPDGCPP  227 (262)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSCTTSCGGGHHHHHTTTC-------CCCCCTTCCH
T ss_pred             CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHcCC-------CCCCCccCCH
Confidence                            4456789999999999999999986 468888888888877775432       4566778999


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      ++++|+.+||+.||.+|||+.+|+++|+++.
T Consensus       228 ~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         228 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            9999999999999999999999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-39  Score=261.74  Aligned_cols=184  Identities=29%  Similarity=0.583  Sum_probs=155.9

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +++.++|++.++||+|+||.||+|.+.........||||.+.        +.+.+|+++|++++||||++++|++..++.
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  101 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP  101 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            577788999999999999999999986432233568999873        468999999999999999999999999999


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .+++|||| ++|+|.+++...                              |||+                         
T Consensus       102 ~~iv~Ey~-~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         102 VMIITEFM-ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             CEEEEECC-TTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEEEEEec-CCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            99999999 999999988653                              4444                         


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++|||||||++|||+|+ |..||.+.+..++...+....       ++
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~-g~~Pf~~~~~~~~~~~i~~~~-------~~  252 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY-GERPYWDMTNQDVINAIEQDY-------RL  252 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-------CC
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------CC
Confidence                                    3355789999999999999999985 468999988888877775532       45


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +.|..++.++.+|+.+||+.+|.+|||+.+|++.|+++.+
T Consensus       253 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         253 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            6678899999999999999999999999999999999843

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-40  Score=258.04  Aligned_cols=176  Identities=27%  Similarity=0.550  Sum_probs=153.1

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      +++++|++.++||+|+||.||+|+++    ++..||||.++      +++.+|+.++.+++||||++++|++.+++..++
T Consensus         1 ~~~~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~i   76 (258)
T d1k2pa_           1 IDPKDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   76 (258)
T ss_dssp             CCCCCCCCCCCCCEETTEEEEEEEET----TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEE
T ss_pred             CChHHCEEeEEEecCCCeEEEEEEEC----CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Confidence            46788999999999999999999985    67899999984      679999999999999999999999999889999


Q ss_pred             EEeeccccCCHHHHhhhC------------------------------Cccc----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------------  123 (228)
                      ||||+ ++|+|.+++...                              +||+                            
T Consensus        77 v~Ey~-~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~  155 (258)
T d1k2pa_          77 ITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  155 (258)
T ss_dssp             EEECC-TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred             EEEcc-CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence            99999 999999886543                              3333                            


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       .....++.++|||||||++|||+|+ |..||.+.+..++...+..+.       +++.|..++
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~-g~~Pf~~~~~~~~~~~i~~~~-------~~~~p~~~~  227 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGL-------RLYRPHLAS  227 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTSCHHHHHHHHHTTC-------CCCCCTTCC
T ss_pred             eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhc-CCCCCCCCCHHHHHHHHHhCC-------CCCCccccc
Confidence                             3455789999999999999999985 368999999888887776542       456678899


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      +++.+|+.+||+.+|++|||+++|+++|..
T Consensus       228 ~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         228 EKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            999999999999999999999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=256.80  Aligned_cols=183  Identities=31%  Similarity=0.577  Sum_probs=156.5

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      +|+|++++|++++.||+|+||.||+|.+....+.+..||||.++        ..+.+|+.++++++||||++++|++. +
T Consensus         1 ~~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~   79 (273)
T d1mp8a_           1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   79 (273)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             CCCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            58999999999999999999999999987544355789999883        45889999999999999999999995 4


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ ++|+|.+++...                              |||+                       
T Consensus        80 ~~~~iv~E~~-~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          80 NPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             SSCEEEEECC-TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             CeEEEEEEec-cCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheec
Confidence            5789999999 999999887543                              4444                       


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +....++.++|||||||++|||+++ |.+||.+.+..++...+..+.       ..+.
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~-g~~P~~~~~~~~~~~~i~~~~-------~~~~  230 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGE-------RLPM  230 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT-SCCTTTTCCGGGHHHHHHTTC-------CCCC
T ss_pred             cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-------CCCC
Confidence                                  4456789999999999999999986 468999988888877776542       4566


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      |..+++++.+|+.+||+.||.+|||+.+|+++|+.+
T Consensus       231 ~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            788999999999999999999999999999999988

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-39  Score=255.41  Aligned_cols=186  Identities=24%  Similarity=0.394  Sum_probs=150.6

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ++|+|++++|++.+.||+|+||.||+|+++      ..||||.++         +.+.+|+.++.+++||||++++|++.
T Consensus         1 ddwei~~~~~~~~~~lG~G~fg~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~   74 (276)
T d1uwha_           1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST   74 (276)
T ss_dssp             CCCBCCTTCCCCCSEEEECSSCEEEEEESS------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             CCcccccccEEEEEEEeeCCCcEEEEEEEC------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe
Confidence            579999999999999999999999999763      259999983         56889999999999999999999875


Q ss_pred             CCCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           95 GEQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        95 ~~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                      . +..+++|||| ++|+|.+++...                              |||+                     
T Consensus        75 ~-~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~  152 (276)
T d1uwha_          75 A-PQLAIVTQWC-EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT  152 (276)
T ss_dssp             S-SSCEEEEECC-CEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSC
T ss_pred             c-cEEEEEEecC-CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccccee
Confidence            4 4689999999 999999998643                              4444                     


Q ss_pred             -------------------------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHhhhCCC
Q psy796          124 -------------------------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYGGE  174 (228)
Q Consensus       124 -------------------------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~  174 (228)
                                               +   ....|+.++|||||||++|||+|  |..||.+.+..... ..+......  
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~--  228 (276)
T d1uwha_         153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLS--  228 (276)
T ss_dssp             C------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHH--SSCTTTTCCCHHHHHHHHHHTSCC--
T ss_pred             eccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHH--CCCCCCCCChHHHHHHHHhcCCCC--
Confidence                                     1   23457899999999999999999  67999887765443 333332211  


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhccCC
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKS  222 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~~~  222 (228)
                       +.....+..+++++.+|+.+||+.+|.+|||+.+|+++|+.+.+..+
T Consensus       229 -p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         229 -PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             -CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             -CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence             11122456789999999999999999999999999999999965443

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-39  Score=257.50  Aligned_cols=182  Identities=28%  Similarity=0.524  Sum_probs=152.0

Q ss_pred             cccccCCCceeeee-ecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           25 VVPIPRYCLRVLER-LGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        25 ~~~~~~~~~~~~~~-ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .+.++++++.+.++ ||+|+||.||+|.++... ++..||||.++        +.+.+|++++++++||||++++|++..
T Consensus         2 ~l~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~-~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~   80 (285)
T d1u59a_           2 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA   80 (285)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             ceeecccCeEECCcEEecccCeEEEEEEEecCC-CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc
Confidence            46678889999885 999999999999875321 45689999983        558899999999999999999999975


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~----------------------  123 (228)
                      + ..++||||+ ++|+|.+++...                              |||+                      
T Consensus        81 ~-~~~lvmE~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          81 E-ALMLVMEMA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             S-SEEEEEECC-TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             C-eEEEEEEeC-CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhc
Confidence            4 579999999 999999997543                              4444                      


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcccc
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF  178 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  178 (228)
                                               +....++.++|||||||++|||+|. |..||.+.+..++...+..+.       +
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~-G~~Pf~~~~~~~~~~~i~~~~-------~  230 (285)
T d1u59a_         159 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY-GQKPYKKMKGPEVMAFIEQGK-------R  230 (285)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTCCTHHHHHHHHTTC-------C
T ss_pred             ccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCC-------C
Confidence                                     3345678999999999999999985 468999988888777776543       4


Q ss_pred             CCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       179 ~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ++.|..+++++.+|+.+||+.+|++||||.+|++.|+..
T Consensus       231 ~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         231 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            566788999999999999999999999999999998876

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-38  Score=255.70  Aligned_cols=186  Identities=31%  Similarity=0.576  Sum_probs=159.7

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVC   93 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~   93 (228)
                      ..+++++++|++++.||+|+||.||+|++...  ..++..||||.++        .++.+|++++++++|+||+++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            45889999999999999999999999998642  1256889999983        5689999999999999999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------------------------------C
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------------------------------D  120 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------------------------------r  120 (228)
                      ...+..+++|||+ ++|+|.+++...                                                     |
T Consensus        86 ~~~~~~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr  164 (301)
T d1lufa_          86 AVGKPMCLLFEYM-AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  164 (301)
T ss_dssp             CSSSSCEEEEECC-TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             ccCCceEEEEEec-CCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence            9999999999999 999999998642                                                     4


Q ss_pred             ccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCC
Q psy796          121 NLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPF  154 (228)
Q Consensus       121 ~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~  154 (228)
                      ||+                                              .....++.++|||||||++|||+++ +.+||
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~-~~~p~  243 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY-GLQPY  243 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCCTT
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHcc-CCCCC
Confidence            444                                              3344689999999999999999996 35789


Q ss_pred             CCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          155 PHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+.+..++...+..+.       .++.|..++.++++|+.+||+.+|.+||||.+|++.|+++.
T Consensus       244 ~~~~~~e~~~~v~~~~-------~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         244 YGMAHEEVIYYVRDGN-------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTSCHHHHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHcCC-------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9988888877776543       34557789999999999999999999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-38  Score=257.39  Aligned_cols=185  Identities=29%  Similarity=0.581  Sum_probs=157.3

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCc--eeEEeecch--------HHHHHHHHHHhhC-CCCCcceeeeee
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILGVC   93 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~--~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g~~   93 (228)
                      .+.|+.++|++.++||+|+||.||+|.+..   ++  ..||||.++        +.+.+|+++|.++ +||||++++|++
T Consensus         4 ~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~   80 (309)
T d1fvra_           4 YPVLDWNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   80 (309)
T ss_dssp             SSBCCGGGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             CCccCHHHcEEEEEEeeCCCcEEEEEEECC---CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEE
Confidence            456888999999999999999999999875   43  368888873        4589999999998 799999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc-----
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT-----  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~-----  123 (228)
                      .+++..++||||+ ++|+|.++|+..                                             |||+     
T Consensus        81 ~~~~~~~iV~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL  159 (309)
T d1fvra_          81 EHRGYLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  159 (309)
T ss_dssp             EETTEEEEEECCC-TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             ecCCeeEEEEEec-CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEE
Confidence            9998999999999 999999998643                                             3444     


Q ss_pred             --------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q psy796          124 --------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN  165 (228)
Q Consensus       124 --------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~  165 (228)
                                                            +....++.++|||||||++|||+++ +.+||.+.+..++...
T Consensus       160 ~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~-~~~p~~~~~~~~~~~~  238 (309)
T d1fvra_         160 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEK  238 (309)
T ss_dssp             ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHH
T ss_pred             EcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhc-CCCCCCCCCHHHHHHH
Confidence                                                  4455789999999999999999996 3578988888888777


Q ss_pred             HHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccC
Q psy796          166 AEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYK  221 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~  221 (228)
                      +..+.       +++.|..+++++++|+.+||+.||++|||+.+|+++|+++ .+..
T Consensus       239 i~~~~-------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~  288 (309)
T d1fvra_         239 LPQGY-------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  288 (309)
T ss_dssp             GGGTC-------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             HHhcC-------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence            65532       4566778999999999999999999999999999999998 4433

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-38  Score=252.87  Aligned_cols=182  Identities=32%  Similarity=0.630  Sum_probs=156.1

Q ss_pred             CCCcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        22 ~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..+.|+|+.++|++++.||+|+||.||+|.++    ++..||||.++      +.+.+|+.++++++|+||++++|++.+
T Consensus         8 ~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~----~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~   83 (285)
T d1fmka3           8 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE   83 (285)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCcceEcCHHHEEEeeEEeeCCCeEEEEEEEC----CCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec
Confidence            45899999999999999999999999999886    55679999984      669999999999999999999999854


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-------------------------------Cccc---------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------  123 (228)
                       +..++||||+ ++|+|.+++...                               |||+                     
T Consensus        84 -~~~~lv~Ey~-~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~  161 (285)
T d1fmka3          84 -EPIYIVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR  161 (285)
T ss_dssp             -SSCEEEECCC-TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred             -CCeEEEEEec-CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhh
Confidence             4689999999 999999887643                               3444                     


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              +....++.++||||||+++|||++++ .+|+...+..++...+....       +.
T Consensus       162 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~-~p~~~~~~~~~~~~~i~~~~-------~~  233 (285)
T d1fmka3         162 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG-RVPYPGMVNREVLDQVERGY-------RM  233 (285)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT-CCSSTTCCHHHHHHHHHTTC-------CC
T ss_pred             hccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCC-CCCCCCCCHHHHHHHHHhcC-------CC
Confidence                                    34567899999999999999999974 57777777777777765432       45


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+..+++++++++.+||+.+|++|||+++|+..|+.+
T Consensus       234 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            56788999999999999999999999999999998876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-38  Score=256.65  Aligned_cols=188  Identities=30%  Similarity=0.511  Sum_probs=155.2

Q ss_pred             CCCCcccccCCCceeeeeecccceeeEEEEEEeccCC--CceeEEeecch--------HHHHHHHHHHhhC-CCCCccee
Q psy796           21 REGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIEL--DTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSI   89 (228)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~--~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~   89 (228)
                      .....|+|++++|+++++||+|+||.||+|++.....  ....||+|.+.        ..+.+|+.++.++ +|||||++
T Consensus        27 ~~~~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l  106 (325)
T d1rjba_          27 EYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL  106 (325)
T ss_dssp             CCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEE
Confidence            3346789999999999999999999999999864221  23579999883        4578999999988 89999999


Q ss_pred             eeeeeCCCCCeEEEeeccccCCHHHHhhhC--------------------------------------------------
Q psy796           90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNSA--------------------------------------------------  119 (228)
Q Consensus        90 ~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~--------------------------------------------------  119 (228)
                      +|++.+.+..++||||| ++|+|.++|+..                                                  
T Consensus       107 ~~~~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I  185 (325)
T d1rjba_         107 LGACTLSGPIYLIFEYC-CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  185 (325)
T ss_dssp             EEEECSSSSCEEEEECC-TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeeCCeEEEEEEcC-CCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999999 999999998542                                                  


Q ss_pred             --Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCC
Q psy796          120 --DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRD  151 (228)
Q Consensus       120 --r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~  151 (228)
                        |||+                                              +....++.++|||||||++|||+|+ |.
T Consensus       186 iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~-g~  264 (325)
T d1rjba_         186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL-GV  264 (325)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT-SC
T ss_pred             eeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhC-CC
Confidence              4444                                              4456789999999999999999985 36


Q ss_pred             CCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy796          152 KPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR  216 (228)
Q Consensus       152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~  216 (228)
                      .||.+.+.......+....      .+++.|..+++++++|+.+||+.+|++|||+++|+++|..
T Consensus       265 ~Pf~~~~~~~~~~~~~~~~------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         265 NPYPGIPVDANFYKLIQNG------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             CSSTTCCCSHHHHHHHHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcC------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            8998877655444433321      1456678899999999999999999999999999999963

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-38  Score=252.76  Aligned_cols=191  Identities=31%  Similarity=0.591  Sum_probs=156.0

Q ss_pred             CCCCCcccccCCCceeeeeecccceeeEEEEEEeccC----CCceeEEeecch--------HHHHHHHHHHhhC-CCCCc
Q psy796           20 CREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE----LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNL   86 (228)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~----~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~ni   86 (228)
                      .|..+.|+|++++|++++.||+|+||.||+|+.....    ..+..||||.++        .++.+|+..+.++ +||||
T Consensus         2 ~~~~~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnI   81 (299)
T d1fgka_           2 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI   81 (299)
T ss_dssp             CCCCTTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cCcCCcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeE
Confidence            4566789999999999999999999999999875421    134689999984        5577888888887 89999


Q ss_pred             ceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------------Cc
Q psy796           87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DN  121 (228)
Q Consensus        87 v~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~  121 (228)
                      ++++|++.++...++||||+ ++|+|.++|...                                             ||
T Consensus        82 v~~~~~~~~~~~~~~v~e~~-~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrD  160 (299)
T d1fgka_          82 INLLGACTQDGPLYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD  160 (299)
T ss_dssp             CCEEEEECSSSSCEEEECCC-TTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EecccccccCCeEEEEEEcc-CCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeee
Confidence            99999999998999999999 999999998532                                             33


Q ss_pred             cc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCC
Q psy796          122 LT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFP  155 (228)
Q Consensus       122 l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~  155 (228)
                      |+                                              +.++.|+.++|||||||++|||+++ |.+||.
T Consensus       161 iKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~-g~~p~~  239 (299)
T d1fgka_         161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL-GGSPYP  239 (299)
T ss_dssp             CSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSST
T ss_pred             ecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccC-CCCCCC
Confidence            33                                              4456899999999999999999986 468999


Q ss_pred             CCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhc
Q psy796          156 HLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN  219 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~  219 (228)
                      +.+..++...+....       .++.|..+++++++|+.+||+.+|.+|||+.+|++.|+++..
T Consensus       240 ~~~~~~~~~~i~~~~-------~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         240 GVPVEELFKLLKEGH-------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             TCCHHHHHHHHHTTC-------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCC-------CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            888887777665432       456678899999999999999999999999999999999843

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=249.35  Aligned_cols=184  Identities=27%  Similarity=0.560  Sum_probs=154.2

Q ss_pred             ccccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           26 VPIPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        26 ~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      -+|++++|+..++||+|+||.||+|.++.... ....||||.++        ..+.+|++++.+++||||++++|++...
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            47888999999999999999999999874221 23579999883        4588999999999999999999999998


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                      +..+++|||+ .+|++.+++...                              |||+                       
T Consensus        82 ~~~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          82 KPMMIITEYM-ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             SSEEEEEECC-TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             CceEEEEEec-ccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcc
Confidence            8999999999 999998876543                              4554                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              +....++.++|||||||++|||+++ +.+|+...+..++...+..+.       ++
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~-~~~~~~~~~~~~~~~~i~~~~-------~~  232 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY-GERPYWELSNHEVMKAINDGF-------RL  232 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-------CC
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhC-CCCccccCCHHHHHHHHhccC-------CC
Confidence                                    4455789999999999999999996 356777777777776665442       45


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      +.|..++.++.+|+.+||+.+|++|||+.+|++.|+++.
T Consensus       233 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~  271 (283)
T d1mqba_         233 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  271 (283)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence            667789999999999999999999999999999999883

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-38  Score=252.80  Aligned_cols=193  Identities=28%  Similarity=0.520  Sum_probs=159.1

Q ss_pred             cccCCCCCcccccCCCceeeeeecccceeeEEEEEEecc--CCCceeEEeecch--------HHHHHHHHHHhhC-CCCC
Q psy796           17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRTCR--------GDSLREIRFLSSL-QDPN   85 (228)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~n   85 (228)
                      +..++....|+|++++|+++++||+|+||.||+|++...  ...++.||||+++        ..+.+|+.++..+ +|||
T Consensus         9 ~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn   88 (311)
T d1t46a_           9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN   88 (311)
T ss_dssp             TTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             cccCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC
Confidence            445666678999999999999999999999999998642  2266899999984        4578999999998 6999


Q ss_pred             cceeeeeeeCCCCCeEEEeeccccCCHHHHhhhC----------------------------------------------
Q psy796           86 LVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA----------------------------------------------  119 (228)
Q Consensus        86 iv~~~g~~~~~~~~~lv~e~~~~~g~L~~~l~~~----------------------------------------------  119 (228)
                      |++++|++.+....+++|||| ++|+|.++++..                                              
T Consensus        89 Iv~~~g~~~~~~~~~lvmE~~-~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~iv  167 (311)
T d1t46a_          89 IVNLLGACTIGGPTLVITEYC-CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI  167 (311)
T ss_dssp             BCCEEEEECSSSSCEEEEECC-TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEEEEEeeCCEEEEEEEcC-CCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            999999999988999999999 999999998643                                              


Q ss_pred             -Cccc----------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCC
Q psy796          120 -DNLT----------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDK  152 (228)
Q Consensus       120 -r~l~----------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~  152 (228)
                       |||+                                              .....++.++|||||||++|||+|+ |.+
T Consensus       168 HrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~-g~p  246 (311)
T d1t46a_         168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL-GSS  246 (311)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-TCC
T ss_pred             ecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhC-CCC
Confidence             4444                                              4455789999999999999999996 457


Q ss_pred             CCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          153 PFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ||...+.......+.....      ++..|..++.++.+|+.+||+.||.+||||.+|++.|+++
T Consensus       247 ~~~~~~~~~~~~~~i~~~~------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         247 PYPGMPVDSKFYKMIKEGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             SSTTCCSSHHHHHHHHHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCC------CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            7777666554444332211      3455677899999999999999999999999999999987

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-38  Score=249.51  Aligned_cols=179  Identities=30%  Similarity=0.535  Sum_probs=148.3

Q ss_pred             ccCCCceee-eeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      ++++.+.+. +.||+|+||.||+|.++... .++.||||.++         +.+.+|++++++++||||++++|++..+ 
T Consensus         3 ld~~~~~le~k~iG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-   80 (277)
T d1xbba_           3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-   80 (277)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-
T ss_pred             echhhCeecCCCcccCCCeEEEEEEEccCC-cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-
Confidence            344555554 47999999999999886421 46789999983         4588999999999999999999999654 


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++||||| ++|+|.+++...                             |||+                         
T Consensus        81 ~~~lvmE~~-~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~  159 (277)
T d1xbba_          81 SWMLVMEMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  159 (277)
T ss_dssp             SEEEEEECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             CEEEEEEcC-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccc
Confidence            578999999 999999998765                             4444                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +....++.++|||||||++|||++. |..||.+.+..++...+..+.       +++.
T Consensus       160 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~-g~~Pf~~~~~~~~~~~i~~~~-------~~~~  231 (277)
T d1xbba_         160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAMLEKGE-------RMGC  231 (277)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-------CCCC
T ss_pred             cccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhC-CCCCCCCCCHHHHHHHHHcCC-------CCCC
Confidence                                  3345678999999999999999985 469999988888777766532       4566


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      |..++.++++|+.+||+.||.+|||+.+|+..|+..
T Consensus       232 p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            788999999999999999999999999999888765

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-38  Score=252.55  Aligned_cols=186  Identities=31%  Similarity=0.531  Sum_probs=159.8

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGV   92 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~   92 (228)
                      .+.|+|++++|++++.||+|+||.||+|.+....  ..+..||||.++        ..+.+|+.++++++|+||++++|+
T Consensus        12 ~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          12 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             ccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            3579999999999999999999999999986421  135789999984        347899999999999999999999


Q ss_pred             eeCCCCCeEEEeeccccCCHHHHhhhC---------------------------------------Cccc----------
Q psy796           93 CTGEQPPWLVMEYPAQLGDLVQHLNSA---------------------------------------DNLT----------  123 (228)
Q Consensus        93 ~~~~~~~~lv~e~~~~~g~L~~~l~~~---------------------------------------r~l~----------  123 (228)
                      +..++..++||||+ ++|+|.+++...                                       |||+          
T Consensus        92 ~~~~~~~~lv~e~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~  170 (308)
T d1p4oa_          92 VSQGQPTLVIMELM-TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  170 (308)
T ss_dssp             ECSSSSCEEEEECC-TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred             EecCCceeEEEeec-CCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc
Confidence            99888999999999 999999987643                                       3333          


Q ss_pred             ------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHH
Q psy796          124 ------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAE  167 (228)
Q Consensus       124 ------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~  167 (228)
                                                          .....++.++||||||+++|||+|++ .+||.+.+..+....+.
T Consensus       171 ~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~-~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         171 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTS-CCTTTTSCHHHHHHHHH
T ss_pred             eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCC-CCCCCCCCHHHHHHHHH
Confidence                                                44567889999999999999999963 68999999888887776


Q ss_pred             HhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          168 HMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      .+.       .++.|..+++++.+++.+||+.+|.+|||+.+|+++|++.
T Consensus       250 ~~~-------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         250 EGG-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             TTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             hCC-------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            543       4556788999999999999999999999999999999876

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=245.38  Aligned_cols=169  Identities=18%  Similarity=0.365  Sum_probs=148.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++++.||+|+||.||+|....   +++.||+|++.          ..+.+|++++++++||||+++++++.+++..+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   82 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   82 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECC---CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEE
Confidence            568999999999999999999875   78899999883          44788999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||| ++|+|.+++...                             |||+                            
T Consensus        83 ivmEy~-~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~  161 (263)
T d2j4za1          83 LILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR  161 (263)
T ss_dssp             EEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCC
T ss_pred             EEEeec-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcc
Confidence            999999 999999988654                             4555                            


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    +.+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..+++++
T Consensus       162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~--G~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~s~~~  231 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV--GKPPFEANTYQETYKRISRV--------EFTFPDFVTEGA  231 (263)
T ss_dssp             EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTT--------CCCCCTTSCHHH
T ss_pred             cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhc--CCCCCCCCCHHHHHHHHHcC--------CCCCCccCCHHH
Confidence                          555678999999999999999999  67999988888877776543        345677899999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++|+.+||+.||.+|||+.++++|
T Consensus       232 ~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         232 RDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHcC
Confidence            999999999999999999999873

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-37  Score=245.67  Aligned_cols=182  Identities=31%  Similarity=0.577  Sum_probs=146.3

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .|..++|++.+.||+|+||.||+|.+....+....||||.++          +++.+|+.++++++||||++++|++.++
T Consensus         4 ~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~   83 (273)
T d1u46a_           4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   83 (273)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             EEchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec
Confidence            466788999999999999999999987654455689999984          4588999999999999999999999664


Q ss_pred             CCCeEEEeeccccCCHHHHhhhC------------------------------Cccc-----------------------
Q psy796           97 QPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-----------------------  123 (228)
Q Consensus        97 ~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-----------------------  123 (228)
                       ..++||||+ ++|++.+++...                              |||+                       
T Consensus        84 -~~~lv~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          84 -PMKMVTELA-PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             -SCEEEEECC-TTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             -chheeeeee-cCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhc
Confidence             679999999 999998876533                              4444                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++|||||||++|||+|+ |..||.+.+..+....+....      .++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~-G~~Pf~~~~~~~~~~~i~~~~------~~~  234 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY-GQEPWIGLNGSQILHKIDKEG------ERL  234 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTSC------CCC
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhC-CCCCCCCcCHHHHHHHHHhCC------CCC
Confidence                                    3334577889999999999999985 368999998888877765432      144


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +.+..++.++++|+.+||+.||.+||||.+|++.|++.
T Consensus       235 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            56778999999999999999999999999999988875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-38  Score=249.97  Aligned_cols=184  Identities=13%  Similarity=0.198  Sum_probs=155.5

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      .+++|+++++||+|+||.||+|....   +++.||||+++          ..+.+|++++++++||||+++++++.+++.
T Consensus         6 ~p~dy~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           6 RPEDFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK   82 (288)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSE
T ss_pred             CCCCCEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCE
Confidence            34679999999999999999999875   78899999983          347899999999999999999999999999


Q ss_pred             CeEEEeeccccCCHHHHhhhC-----------------------------Cccc--------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT--------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~--------------------------  123 (228)
                      .++||||| ++|+|.+++...                             |||+                          
T Consensus        83 ~~ivmEy~-~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          83 LYFGLSYA-KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             EEEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EEEEEEcc-CCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccC
Confidence            99999999 999999987654                             4554                          


Q ss_pred             --------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 --------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 --------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                          +.+..++.++|||||||++|||++  |..||.+.+...+...+...        ....|.
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~--g~~Pf~~~~~~~~~~~i~~~--------~~~~p~  231 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA--GLPPFRAGNEYLIFQKIIKL--------EYDFPE  231 (288)
T ss_dssp             --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHTT--------CCCCCT
T ss_pred             CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhh--CCCCCCCcCHHHHHHHHHcC--------CCCCCc
Confidence                                445678999999999999999999  67999988888777776543        344677


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccCCCCCc
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYKSNLDL  226 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~~~~~~  226 (228)
                      .+++++++|+.+||+.||.+|||++|++.+..-. ..+..++||
T Consensus       232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w  275 (288)
T d1uu3a_         232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  275 (288)
T ss_dssp             TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCH
Confidence            8999999999999999999999999987765544 445555555

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-37  Score=244.60  Aligned_cols=171  Identities=19%  Similarity=0.334  Sum_probs=143.4

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC--CC
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE--QP   98 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~   98 (228)
                      .++|++.+.||+|+||.||+|+...   +++.||+|.++         ..+.+|++++++++||||+++++++.+.  +.
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   79 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT   79 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----C
T ss_pred             chhCEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCE
Confidence            3578999999999999999999876   78899999883         4478999999999999999999998653  46


Q ss_pred             CeEEEeeccccCCHHHHhhhC--------------------------------------Cccc-----------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA--------------------------------------DNLT-----------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~--------------------------------------r~l~-----------------  123 (228)
                      +++||||| ++|+|.+++...                                      |||+                 
T Consensus        80 ~~ivmEy~-~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DF  158 (269)
T d2java1          80 LYIVMEYC-EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  158 (269)
T ss_dssp             EEEEEECC-TTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCH
T ss_pred             EEEEEecC-CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeec
Confidence            79999999 999999887532                                      4444                 


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 +.+..++.++|||||||++|||++  |..||.+.+..++...+....      
T Consensus       159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~t--g~~Pf~~~~~~~~~~~i~~~~------  230 (269)
T d2java1         159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA--LMPPFTAFSQKELAGKIREGK------  230 (269)
T ss_dssp             HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHTC------
T ss_pred             cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhh--CCCCCCCCCHHHHHHHHHcCC------
Confidence                                       456678999999999999999999  679999988888877776542      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                       ....|..+++++.+|+.+||+.||.+|||+.++++|
T Consensus       231 -~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         231 -FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence             223467789999999999999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-37  Score=247.37  Aligned_cols=172  Identities=21%  Similarity=0.366  Sum_probs=146.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.|++.+.||+|+||.||+|....   ++..||+|+++       +.+.+|++++++++||||+++++++.+++..++||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKE---TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECC---CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            457999999999999999999876   78899999983       56889999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| ++|+|.+++...                              |||+                              
T Consensus        89 Ey~-~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          89 EFC-AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             ECC-TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHH
T ss_pred             ecC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccc
Confidence            999 999999987532                              4444                              


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         .....|+.++|||||||++|||++  |..||.+.+..+....+....     .+.+..+..
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemlt--g~~Pf~~~~~~~~~~~i~~~~-----~~~~~~~~~  240 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE--IEPPHHELNPMRVLLKIAKSE-----PPTLAQPSR  240 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHH--SSCTTTTSCGGGHHHHHHHSC-----CCCCSSGGG
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhh--CCCCCCCCCHHHHHHHHHcCC-----CCCCCcccc
Confidence                               135568899999999999999999  679999988877776665432     113444667


Q ss_pred             CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++++++|+.+||+.||.+|||+.++++|
T Consensus       241 ~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         241 WSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            89999999999999999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=243.62  Aligned_cols=173  Identities=18%  Similarity=0.301  Sum_probs=146.8

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .+.|++.+.||+|+||.||+|....   +++.||||.++       +.+.+|++++++++||||+++++++.+++..++|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   95 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEE
Confidence            4568999999999999999998765   78999999883       5589999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC----------------------------Cccc-------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA----------------------------DNLT-------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~----------------------------r~l~-------------------------------  123 (228)
                      |||| ++|+|.+++...                            |||+                               
T Consensus        96 mEy~-~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~  174 (293)
T d1yhwa1          96 MEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (293)
T ss_dssp             EECC-TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EEec-CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence            9999 999999987654                            5555                               


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   +.+..++.++|||||||++|||++  |..||.+.+..+....+.....     +.+..+..++++++
T Consensus       175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemlt--G~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~  247 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFR  247 (293)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHHCS-----CCCSSGGGSCHHHH
T ss_pred             ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhh--CCCCCCCCCHHHHHHHHHhCCC-----CCCCCcccCCHHHH
Confidence                         445678999999999999999999  6799998887766555543321     12344667899999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +|+.+||+.||.+|||+.++++|
T Consensus       248 ~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         248 DFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHccCChhHCcCHHHHhcC
Confidence            99999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=244.73  Aligned_cols=187  Identities=27%  Similarity=0.535  Sum_probs=143.0

Q ss_pred             ccccCCCce--eeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeC
Q psy796           26 VPIPRYCLR--VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        26 ~~~~~~~~~--~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~   95 (228)
                      ..++.+.+.  +.++||+|+||+||+|.+.........||||.++        +++.+|++++.+++||||++++|++..
T Consensus        20 ~~~~~~~~~~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~   99 (311)
T d1r0pa_          20 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR   99 (311)
T ss_dssp             GBCCGGGEEEEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE
T ss_pred             eEeChHHceeccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe
Confidence            334444444  3679999999999999986532234579999883        568999999999999999999999865


Q ss_pred             -CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc---------------------
Q psy796           96 -EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT---------------------  123 (228)
Q Consensus        96 -~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~---------------------  123 (228)
                       +...++||||| ++|+|.+++...                              |||+                     
T Consensus       100 ~~~~~~lv~E~~-~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~  178 (311)
T d1r0pa_         100 SEGSPLVVLPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR  178 (311)
T ss_dssp             TTTEEEEEEECC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGC
T ss_pred             cCCceEEEEEEe-ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchh
Confidence             45689999999 999999988644                              4444                     


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCcc
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQ  176 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  176 (228)
                                                 .....++.++||||||+++|||++++ .+|+...+..+....+..+.      
T Consensus       179 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~-~p~~~~~~~~~~~~~i~~g~------  251 (311)
T d1r0pa_         179 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG-APPYPDVNTFDITVYLLQGR------  251 (311)
T ss_dssp             CTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS-CCSCC------CHHHHHTTC------
T ss_pred             hccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCC-CCCCCCCCHHHHHHHHHcCC------
Confidence                                       34557899999999999999999963 45555555555555554432      


Q ss_pred             ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-hccC
Q psy796          177 VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS-TNYK  221 (228)
Q Consensus       177 ~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~-~~~~  221 (228)
                       ++..|..+++++.+|+.+||+.||++|||+.+|+++|+++ ..+.
T Consensus       252 -~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         252 -RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             -CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence             4556778999999999999999999999999999999999 4433

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-36  Score=242.58  Aligned_cols=180  Identities=25%  Similarity=0.485  Sum_probs=149.7

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCC-CceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIEL-DTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~-~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      +..++|+++++||+|+||.||+|.+..... ....||+|.++        +.+.+|+.++++++||||++++|++.++ .
T Consensus         6 ~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~   84 (317)
T d1xkka_           6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   84 (317)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S
T ss_pred             CCHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-C
Confidence            455679999999999999999999864110 12468999873        5689999999999999999999999765 5


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++++||+ .+|+|.+++...                              |||+                         
T Consensus        85 ~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          85 VQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EEEEEECC-TTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             eeEEEEec-cCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            78899999 899998877654                              4444                         


Q ss_pred             ---------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCC
Q psy796          124 ---------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP  182 (228)
Q Consensus       124 ---------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (228)
                                           +....++.++|||||||++|||+|+ |.+||.+.+..++...+..+.       +++.|
T Consensus       164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~-g~~p~~~~~~~~~~~~i~~~~-------~~~~p  235 (317)
T d1xkka_         164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGE-------RLPQP  235 (317)
T ss_dssp             TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTSCGGGHHHHHHHTC-------CCCCC
T ss_pred             ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHcCC-------CCCCC
Confidence                                 4455789999999999999999996 479999888887777665542       45677


Q ss_pred             CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       183 ~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      ..+++++.+|+.+||+.+|.+|||+.+|+++|+++
T Consensus       236 ~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            88999999999999999999999999999999887

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=244.27  Aligned_cols=173  Identities=20%  Similarity=0.261  Sum_probs=146.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      +.|++++.||+|+||.||+|....   +++.||||+++             +.+.+|++++++++||||+++++++.+++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   86 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCEEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            458999999999999999999865   78999999873             55889999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++||||| ++|+|.+++...                             |||+                         
T Consensus        87 ~~~iv~E~~-~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          87 DVILILELV-AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEEEEcC-CCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhh
Confidence            999999999 999999998654                             3443                         


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            +.+..++.++|||||||++|||++  |..||.+.+..+....+.......    ....
T Consensus       166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~--g~~Pf~~~~~~~~~~~i~~~~~~~----~~~~  239 (293)
T d1jksa_         166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS--GASPFLGDTKQETLANVSAVNYEF----EDEY  239 (293)
T ss_dssp             ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHTTCCCC----CHHH
T ss_pred             hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHc--CCCCCCCCCHHHHHHHHHhcCCCC----Cchh
Confidence                                  445678999999999999999999  679999988888777765542110    1112


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..++.++++|+.+||+.||.+|||+.++++|
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         240 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            35789999999999999999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-36  Score=243.41  Aligned_cols=173  Identities=18%  Similarity=0.296  Sum_probs=146.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      +.|++.+.||+|+||.||+|....   +++.||||.+.        ..+.+|+.++++++||||+++++++.+++..++|
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKR---TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETT---TCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            458999999999999999998865   68899999984        3467899999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||| ++|+|.++|...                             |||+                              
T Consensus        86 mE~~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          86 MQLV-SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             ECCC-CSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             Eecc-CCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence            9999 999999998654                             4444                              


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcH
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR  187 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (228)
                                      +.+..++.++|||||||++|||++  |..||.+.+..++...+.....    ....+.+..+++
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~--g~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~  238 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC--GYPPFYDENDAKLFEQILKAEY----EFDSPYWDDISD  238 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHTTCC----CCCTTTTTTSCH
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHh--CCCCCCCCCHHHHHHHHhccCC----CCCCccccCCCH
Confidence                            455678999999999999999999  6799998888877776655321    112233467899


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          188 DIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       188 ~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++.+|+.+||+.||.+|||+.++++|
T Consensus       239 ~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         239 SAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            99999999999999999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=238.65  Aligned_cols=187  Identities=28%  Similarity=0.538  Sum_probs=150.4

Q ss_pred             CCcccccCCCceeeeeecccceeeEEEEEEeccC--CCceeEEeecch--------HHHHHHHHHHhhC-CCCCcceeee
Q psy796           23 GDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCR--------GDSLREIRFLSSL-QDPNLVSILG   91 (228)
Q Consensus        23 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vavK~~~--------~~~~~e~~~l~~l-~h~niv~~~g   91 (228)
                      .+.|+|++++|++++.||+|+||.||+|.+....  ..++.||||.++        ..+.+|+..+.++ +|+||+.+++
T Consensus         5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1           5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence            4678999999999999999999999999986422  145789999984        3466777777766 7999999999


Q ss_pred             eeeCCC-CCeEEEeeccccCCHHHHhhhC---------------------------------------------Cccc--
Q psy796           92 VCTGEQ-PPWLVMEYPAQLGDLVQHLNSA---------------------------------------------DNLT--  123 (228)
Q Consensus        92 ~~~~~~-~~~lv~e~~~~~g~L~~~l~~~---------------------------------------------r~l~--  123 (228)
                      ++...+ ..+++|||| ++|+|.++|...                                             |||+  
T Consensus        85 ~~~~~~~~~~iv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~  163 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  163 (299)
T ss_dssp             EECSTTSCCEEEEECC-TTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeccCCCeEEEEEEec-CCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcc
Confidence            886654 689999999 999999998532                                             4444  


Q ss_pred             --------------------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh
Q psy796          124 --------------------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN  159 (228)
Q Consensus       124 --------------------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~  159 (228)
                                                                  +.+..++.++|||||||++|||+++ +.+||.+.+.
T Consensus       164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~-~~~p~~~~~~  242 (299)
T d1ywna1         164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKI  242 (299)
T ss_dssp             GEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCC
T ss_pred             ceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhC-CCCCCCCCCH
Confidence                                                        3455789999999999999999996 3578887665


Q ss_pred             HH-HHHHHHHhhhCCCccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHh
Q psy796          160 EQ-VIQNAEHMYYGGELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRST  218 (228)
Q Consensus       160 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~  218 (228)
                      .+ +...+..+.       +++.|..+++++.+++.+||+.||.+|||+.+|+++|+.+.
T Consensus       243 ~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         243 DEEFCRRLKEGT-------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             SHHHHHHHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            43 334443332       45567789999999999999999999999999999999883

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-36  Score=237.67  Aligned_cols=171  Identities=19%  Similarity=0.268  Sum_probs=137.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      ++|++.+.||+|+||.||+|....   +++.||||.++        +.+.+|++++++++||||+++++++.+++..++|
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEE
Confidence            468999999999999999999876   78999999983        4578999999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||| ++|+|.+++...                             |||+                              
T Consensus        82 mEy~-~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          82 LEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             EECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             Eecc-CCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            9999 999999988654                             4555                              


Q ss_pred             ----------------cccCCC-CCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ----------------RDRDRY-TCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ----------------~~~~~~-~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                      +.+..+ +.++|||||||++|||++  |..||...+.. .....+....      .....+..+
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~--G~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~  232 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEYSDWKEKK------TYLNPWKKI  232 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHH--SSCSCSSSSTTSHHHHHHHTTC------TTSTTGGGS
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHh--CCCCCCCCChHHHHHHHHhcCC------CCCCccccC
Confidence                            233444 678999999999999999  67898765543 2222222110      022234567


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++.+|+.+||+.||++|||++++++|
T Consensus       233 s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         233 DSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            8999999999999999999999999764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-35  Score=238.44  Aligned_cols=170  Identities=21%  Similarity=0.345  Sum_probs=141.8

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      .|+..+.||+|+||.||+|....   ++..||||.++          ..+.+|+.++++++||||+++++++.+++..++
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   92 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECC---CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEE
Confidence            48889999999999999998875   78999999883          457899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +|||| .+|+|..++...                             |||+                             
T Consensus        93 v~E~~-~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~  171 (309)
T d1u5ra_          93 VMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF  171 (309)
T ss_dssp             EEECC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred             EEEec-CCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCcc
Confidence            99999 989887765443                             5555                             


Q ss_pred             -----------c---ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 -----------R---DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 -----------~---~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                 +   ....|+.++|||||||++|||++  |..||.+.+..+....+.....      ....+..+++++
T Consensus       172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~--g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~s~~~  243 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHWSEYF  243 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHH--SSCTTTTSCHHHHHHHHHHSCC------CCCSCTTSCHHH
T ss_pred             ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHhCCC------CCCCCCCCCHHH
Confidence                       1   24568999999999999999999  6789988887776665544321      122355689999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++|+.+||+.||.+|||+.++++|
T Consensus       244 ~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         244 RNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHCcCChhHCcCHHHHHhC
Confidence            999999999999999999999763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=238.83  Aligned_cols=173  Identities=16%  Similarity=0.217  Sum_probs=146.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEEe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      ++|++.+.||+|+||.||+|....   +++.||||.++      ..+.+|+++|+.++||||+++++++.+++..++|||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~---~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            458999999999999999998876   78999999994      447899999999999999999999999999999999


Q ss_pred             eccccCCHHHHhhhC------------------------------Cccc-------------------------------
Q psy796          105 YPAQLGDLVQHLNSA------------------------------DNLT-------------------------------  123 (228)
Q Consensus       105 ~~~~~g~L~~~l~~~------------------------------r~l~-------------------------------  123 (228)
                      || ++|+|.+++...                              |||+                               
T Consensus        82 ~~-~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          82 FI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CC-CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             cC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence            99 999999998654                              4444                               


Q ss_pred             --------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHH
Q psy796          124 --------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDI  189 (228)
Q Consensus       124 --------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  189 (228)
                                    ..+..++.++||||+||++|||++  |..||.+.+..++...+.......    ....+..++.++
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~--G~~Pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~s~~~  234 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS--GINPFLAETNQQIIENIMNAEYTF----DEEAFKEISIEA  234 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHTCCCC----CHHHHTTSCHHH
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCC----ChhhccCCCHHH
Confidence                          445568999999999999999999  679999988888887776542110    011124689999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q psy796          190 YDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       190 ~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++|+.+||+.||.+|||+.++++|
T Consensus       235 ~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         235 MDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.1e-35  Score=241.22  Aligned_cols=173  Identities=18%  Similarity=0.242  Sum_probs=146.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      ++|++++.||+|+||.||+|....   +++.||||.+.       +.+.+|+.+|++++||||+++++++.+++..++||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~---~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm  102 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  102 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            368999999999999999999875   78999999883       55789999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| ++|+|.+++...                              |||+                              
T Consensus       103 E~~-~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         103 EFM-SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             CCC-CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             EcC-CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            999 999999998532                              4444                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     +.+..++.++|||||||++|||++  |..||.+.+..+....+......    ........++++
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~  255 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS--GLSPFGGENDDETLRNVKSCDWN----MDDSAFSGISED  255 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----SCCGGGGGCCHH
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCcccccCCCHH
Confidence                           445678999999999999999999  67999988888887777654211    011123468899


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +++|+.+||+.||.+|||+.++++|
T Consensus       256 ~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         256 GKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999999885

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.5e-35  Score=240.45  Aligned_cols=173  Identities=17%  Similarity=0.274  Sum_probs=146.8

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEEE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv~  103 (228)
                      +.|++.+.||+|+||.||+|....   +++.||||+++       ..+.+|+.++++++||||+++++++.+++..++||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            458999999999999999998865   78999999983       45788999999999999999999999999999999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||| ++|+|.+++...                              |||+                              
T Consensus       106 E~~-~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         106 EFL-SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             ECC-CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             EcC-CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence            999 999999877543                              4444                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHH
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD  188 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (228)
                                     ..+..++.++|||||||++|||++  |..||.+.+..+....+......    .....+..++.+
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyellt--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~  258 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS--GLSPFAGEDDLETLQNVKRCDWE----FDEDAFSSVSPE  258 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH--SCCSSCCSSHHHHHHHHHHCCCC----CCSSTTTTSCHH
T ss_pred             eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCcccccCCCHH
Confidence                           455678999999999999999999  67999998888887777654211    112234578999


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          189 IYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       189 l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +.+|+.+||+.||.+|||+.++++|
T Consensus       259 ~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         259 AKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=235.68  Aligned_cols=172  Identities=19%  Similarity=0.321  Sum_probs=149.8

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQ   97 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~   97 (228)
                      |.-++|+++++||+|+||.||+|+...   +++.||||+++          ..+.+|+.+|++++||||+++++++.+++
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD   78 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc
Confidence            345679999999999999999999866   78999999984          34678999999999999999999999999


Q ss_pred             CCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-------------------------
Q psy796           98 PPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-------------------------  123 (228)
Q Consensus        98 ~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-------------------------  123 (228)
                      ..++||||+ ++|+|.+++...                             |||+                         
T Consensus        79 ~~~iv~ey~-~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          79 RLCFVMEYA-NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EEEEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             ccccceecc-CCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            999999999 999999988754                             4555                         


Q ss_pred             -------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCC
Q psy796          124 -------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSL  184 (228)
Q Consensus       124 -------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (228)
                                         ..+..|+.++||||+||++|||++  |..||.+.+..++...+...        .+..|..
T Consensus       158 ~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~--G~~pf~~~~~~~~~~~i~~~--------~~~~p~~  227 (337)
T d1o6la_         158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC--GRLPFYNQDHERLFELILME--------EIRFPRT  227 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTT
T ss_pred             CCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHH--CCCCCCCcCHHHHHHHHhcC--------CCCCCcc
Confidence                               556789999999999999999999  67999998888877766554        4556788


Q ss_pred             CcHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          185 CPRDIYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       185 ~~~~l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      ++.++++|+.+||+.||.+|++     ++++++|
T Consensus       228 ~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            9999999999999999999995     8888874

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-34  Score=229.61  Aligned_cols=179  Identities=20%  Similarity=0.237  Sum_probs=147.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC--
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQP--   98 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~--   98 (228)
                      ++|++.+.||+|+||.||+|....   +++.||||+++          ..+.+|+++++.++||||+++++++...+.  
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLR---LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            458999999999999999999865   78999999983          347899999999999999999999876543  


Q ss_pred             --CeEEEeeccccCCHHHHhhhC-----------------------------Cccc------------------------
Q psy796           99 --PWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------  123 (228)
Q Consensus        99 --~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------  123 (228)
                        .++||||+ ++|+|.+++...                             |||+                        
T Consensus        84 ~~~~lvmE~~-~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_          84 PLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             EEEEEEEECC-CEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred             ceEEEEEECC-CCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhc
Confidence              68999999 999999887654                             4555                        


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCC
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLP  180 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                                             ..+..++.++|||||||++|||++  |..||.+.+..+..........    .+...
T Consensus       163 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyellt--G~~Pf~~~~~~~~~~~~~~~~~----~~~~~  236 (277)
T d1o6ya_         163 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT--GEPPFTGDSPVSVAYQHVREDP----IPPSA  236 (277)
T ss_dssp             ----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHCCC----CCGGG
T ss_pred             cccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHh--CCCCCCCcCHHHHHHHHHhcCC----CCCch
Confidence                                   445678999999999999999999  6799998887766555443211    11112


Q ss_pred             CCCCCcHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHhc
Q psy796          181 KPSLCPRDIYDLMCDCWKRDQTMRP-TFKQIYSFMKRSTN  219 (228)
Q Consensus       181 ~~~~~~~~l~~li~~c~~~~p~~Rp-s~~~v~~~l~~~~~  219 (228)
                      .+..+++++.+++.+||+.||.+|| |+++++..|.++.+
T Consensus       237 ~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             TSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             hccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence            3467899999999999999999998 89999999988753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=9.9e-35  Score=231.13  Aligned_cols=173  Identities=18%  Similarity=0.262  Sum_probs=145.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------------HHHHHHHHHHhhCC-CCCcceeeeee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------------GDSLREIRFLSSLQ-DPNLVSILGVC   93 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------------~~~~~e~~~l~~l~-h~niv~~~g~~   93 (228)
                      ++|++.+.||+|+||+||+|+...   +++.||||+++                +.+.+|+.++++++ ||||+++++++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             ccCEEceEEecCcCeEEEEEEECC---CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec
Confidence            578999999999999999998765   78999999973                34789999999997 99999999999


Q ss_pred             eCCCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           94 TGEQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        94 ~~~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                      .+++.++|||||+ ++|+|.++|...                             |||+                     
T Consensus        80 ~~~~~~~ivmE~~-~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          80 ETNTFFFLVFDLM-KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             ECSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ccCcceEEEEEcC-CCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchhee
Confidence            9999999999999 999999998654                             4444                     


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                  .....++.++||||+||+++||++  |..||.+.+.......+.....    
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~--g~~Pf~~~~~~~~~~~i~~~~~----  232 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA--GSPPFWHRKQMLMLRMIMSGNY----  232 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCC----
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhcc--CCCCCCCCCHHHHHHHHHhCCC----
Confidence                                        123457889999999999999999  6799999888777776665421    


Q ss_pred             cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ....+....+++++++++.+||+.+|.+|||+.++++|
T Consensus       233 ~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         233 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            11223345789999999999999999999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-35  Score=236.52  Aligned_cols=185  Identities=19%  Similarity=0.274  Sum_probs=143.9

Q ss_pred             cccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCCCC
Q psy796           27 PIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGEQP   98 (228)
Q Consensus        27 ~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~   98 (228)
                      ++..++|++.+.||+|+||.||+|....   ++..||+|.++        ..+.+|+.+|++++||||+++++++.+++.
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETT---TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            5667889999999999999999999865   78999999983        558899999999999999999999999999


Q ss_pred             CeEEEeeccccCCHHHHhhhC------------------------------Cccc-------------------------
Q psy796           99 PWLVMEYPAQLGDLVQHLNSA------------------------------DNLT-------------------------  123 (228)
Q Consensus        99 ~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~-------------------------  123 (228)
                      .++||||+ ++|+|.+++.+.                              ||||                         
T Consensus        79 ~~iVmEy~-~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          79 ISICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             EEEEEECC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             EEEEEEcC-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence            99999999 999999988643                              5555                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-------------
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-------------  173 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------  173 (228)
                                       +.+..|+.++||||+||++|||++  |..||.+.+..+..........+.             
T Consensus       158 ~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~--G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (322)
T d1s9ja_         158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV--GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  235 (322)
T ss_dssp             HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHH--SSCCSSCCCTTHHHHHC--------------------
T ss_pred             CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccc
Confidence                             556689999999999999999999  668997755432211100000000             


Q ss_pred             ---------C-------------ccccCCC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 ---------E-------------LQVFLPK-PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ---------~-------------~~~~~~~-~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                               .             ....... ....+.++.+|+.+||+.||.+|||++++++|  +++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             ----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence                     0             0000001 12357899999999999999999999999984  6554

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-35  Score=230.63  Aligned_cols=169  Identities=17%  Similarity=0.252  Sum_probs=135.6

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeC----CCCC
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTG----EQPP   99 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~----~~~~   99 (228)
                      +++.+.||+|+||.||+|....   ++..||+|.+.         +.+.+|++++++++||||+++++++.+    +..+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~---~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~   87 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI   87 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEE
Confidence            5777899999999999999865   67899999873         457899999999999999999999864    2357


Q ss_pred             eEEEeeccccCCHHHHhhhC-------------------------------Cccc-------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-------------------------------DNLT-------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-------------------------------r~l~-------------------------  123 (228)
                      +++|||| ++|+|.+++...                               |||+                         
T Consensus        88 ~ivmE~~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          88 VLVTELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             EEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEeCC-CCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            8999999 999999988653                               4444                         


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH-HHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE-QVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                       .-.+.++.++|||||||++|||++  |..||.+.... .+...+.....      ....+..+
T Consensus       167 ~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~--g~~Pf~~~~~~~~~~~~i~~~~~------~~~~~~~~  238 (270)
T d1t4ha_         167 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PASFDKVA  238 (270)
T ss_dssp             TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGGGGGCC
T ss_pred             CCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHH--CCCCCCCcccHHHHHHHHHcCCC------CcccCccC
Confidence                             223468999999999999999999  67999876544 44444433211      11234567


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++++|+.+||+.+|++|||+.|+++|
T Consensus       239 ~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         239 IPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            8899999999999999999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-35  Score=236.94  Aligned_cols=168  Identities=23%  Similarity=0.372  Sum_probs=143.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHh-hCCCCCcceeeeeeeCCCCC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLS-SLQDPNLVSILGVCTGEQPP   99 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~-~l~h~niv~~~g~~~~~~~~   99 (228)
                      ++|+++++||+|+||.||+|....   +++.||||+++          ..+.+|+.++. .++||||+++++++.+++..
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~---t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~   78 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   78 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECC---CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCce
Confidence            578999999999999999999876   78999999984          23566777665 68999999999999999999


Q ss_pred             eEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------------
Q psy796          100 WLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       100 ~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------------  123 (228)
                      ++||||+ ++|+|.+++...                             ||++                           
T Consensus        79 yivmEy~-~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~  157 (320)
T d1xjda_          79 FFVMEYL-NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  157 (320)
T ss_dssp             EEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             eEEEeec-CCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccc
Confidence            9999999 999999998654                             4444                           


Q ss_pred             -----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCc
Q psy796          124 -----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP  186 (228)
Q Consensus       124 -----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                                       +.+..++.++|||||||++|||++  |..||.+.+..++...+...        .+..|..++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemlt--G~~PF~~~~~~~~~~~i~~~--------~~~~p~~~s  227 (320)
T d1xjda_         158 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI--GQSPFHGQDEEELFHSIRMD--------NPFYPRWLE  227 (320)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTTSC
T ss_pred             ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCCCccCC
Confidence                             556688999999999999999999  67999998888887777543        345677899


Q ss_pred             HHHHHHHHHhhccCCCCCCCHH-HHHH
Q psy796          187 RDIYDLMCDCWKRDQTMRPTFK-QIYS  212 (228)
Q Consensus       187 ~~l~~li~~c~~~~p~~Rps~~-~v~~  212 (228)
                      .++++|+.+||+.||.+|||+. ++++
T Consensus       228 ~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         228 KEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            9999999999999999999995 6764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.6e-34  Score=231.93  Aligned_cols=169  Identities=20%  Similarity=0.358  Sum_probs=147.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++++.||+|+||.||+|+...   +++.||||+++          +.+.+|+.++++++||||+++++++.+++..+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   80 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF   80 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeee
Confidence            578999999999999999999865   78999999984          34678999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      +||||| ++|+|..++...                             |||+                            
T Consensus        81 ivmE~~-~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~  159 (316)
T d1fota_          81 MIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY  159 (316)
T ss_dssp             EEECCC-CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred             eEeeec-CCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccc
Confidence            999999 999998887654                             5555                            


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   +.+..++.++|||||||++|||++  |..||.+.+..+....+...        ....|..+++++.
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemlt--G~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~s~~~~  229 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA--GYTPFYDSNTMKTYEKILNA--------ELRFPPFFNEDVK  229 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHHC--------CCCCCTTSCHHHH
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHHHh--CCCCCCCcCHHHHHHHHHcC--------CCCCCCCCCHHHH
Confidence                         556679999999999999999999  67999998888887776654        3456778999999


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHHH
Q psy796          191 DLMCDCWKRDQTMRP-----TFKQIYSF  213 (228)
Q Consensus       191 ~li~~c~~~~p~~Rp-----s~~~v~~~  213 (228)
                      +++.+||+.||.+|+     |++++++|
T Consensus       230 ~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         230 DLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            999999999999996     89999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-33  Score=231.32  Aligned_cols=174  Identities=17%  Similarity=0.227  Sum_probs=138.9

Q ss_pred             cCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHH---HHHHhhCCCCCcceeeeeeeC
Q psy796           29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLRE---IRFLSSLQDPNLVSILGVCTG   95 (228)
Q Consensus        29 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e---~~~l~~l~h~niv~~~g~~~~   95 (228)
                      .-++|++.++||+|+||.||+|+...   +++.||||++.          ..+.+|   +++++.++||||+++++++.+
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~   78 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT   78 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEECC---CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE
Confidence            45679999999999999999999876   78999999983          113344   666777899999999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      ++..++||||| ++|+|.++|...                             |||+                       
T Consensus        79 ~~~~~ivmE~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          79 PDKLSFILDLM-NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             SSEEEEEECCC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             CCEEEEEEEec-CCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeec
Confidence            99999999999 999999988654                             5555                       


Q ss_pred             -------------------c-ccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCC
Q psy796          124 -------------------R-DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPS  183 (228)
Q Consensus       124 -------------------~-~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (228)
                                         + .+..++.++|||||||++|||++  |..||.+.+..+..........     .....|.
T Consensus       158 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemlt--G~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~  230 (364)
T d1omwa3         158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR--GHSPFRQHKTKDKHEIDRMTLT-----MAVELPD  230 (364)
T ss_dssp             SSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH--SSCSSCSSCSSCHHHHHHHSSS-----CCCCCCS
T ss_pred             CCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhccc-----CCCCCCC
Confidence                               3 34568999999999999999999  6799987655433322222111     1334567


Q ss_pred             CCcHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q psy796          184 LCPRDIYDLMCDCWKRDQTMRPT-----FKQIYSF  213 (228)
Q Consensus       184 ~~~~~l~~li~~c~~~~p~~Rps-----~~~v~~~  213 (228)
                      .+++++++||.+||+.||.+|||     ++++++|
T Consensus       231 ~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            89999999999999999999999     6888763

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.9e-33  Score=228.75  Aligned_cols=168  Identities=21%  Similarity=0.308  Sum_probs=146.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~  100 (228)
                      ++|++++.||+|+||.||+|....   +++.||||++.          ..+.+|+.+|+.++||||+++++++.+....+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~---~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccc
Confidence            578999999999999999999875   78999999883          34678999999999999999999999999999


Q ss_pred             EEEeeccccCCHHHHhhhC-----------------------------Cccc----------------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA-----------------------------DNLT----------------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~-----------------------------r~l~----------------------------  123 (228)
                      ++|||+ .+|+|.+++...                             |||+                            
T Consensus       118 ~v~e~~-~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         118 MVMEYV-AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EEEECC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred             cccccc-cccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence            999999 999999988654                             5555                            


Q ss_pred             -------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCCcHHHH
Q psy796          124 -------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIY  190 (228)
Q Consensus       124 -------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (228)
                                   +.+..++.++|||||||++|||++  |..||.+.+.......+...        ....|..+++++.
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemlt--G~~Pf~~~~~~~~~~~i~~~--------~~~~p~~~s~~~~  266 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSG--------KVRFPSHFSSDLK  266 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHC--------CCCCCTTCCHHHH
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHh--CCCCCCCcCHHHHHHHHhcC--------CCCCCccCCHHHH
Confidence                         456678999999999999999999  67999988887777777654        3456778999999


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHH
Q psy796          191 DLMCDCWKRDQTMRP-----TFKQIYS  212 (228)
Q Consensus       191 ~li~~c~~~~p~~Rp-----s~~~v~~  212 (228)
                      +++.+||+.||.+|+     |++++++
T Consensus       267 ~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         267 DLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHhhhCHHhccccccccHHHHHc
Confidence            999999999999994     8999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-32  Score=221.81  Aligned_cols=173  Identities=19%  Similarity=0.254  Sum_probs=136.2

Q ss_pred             eeeeecccceeeEEEEEEeccCCCceeEEeecch------------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeEE
Q psy796           35 VLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLV  102 (228)
Q Consensus        35 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~lv  102 (228)
                      .+++||+|+||+||+|....   +++.||||+++            ..+.+|+.++++++||||+++++++.+++..++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~iv   78 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV   78 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred             cceEeccCcCeEEEEEEECC---CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeeh
Confidence            35789999999999999865   78899999984            2477899999999999999999999999999999


Q ss_pred             EeeccccCCHHHHhhhC-----------------------------Cccc------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-----------------------------DNLT------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-----------------------------r~l~------------------------------  123 (228)
                      |||+ .++++..+....                             |||+                              
T Consensus        79 mE~~-~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~  157 (299)
T d1ua2a_          79 FDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY  157 (299)
T ss_dssp             EECC-SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC
T ss_pred             hhhh-cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccc
Confidence            9999 877776655433                             4555                              


Q ss_pred             ---------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc-----------
Q psy796          124 ---------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV-----------  177 (228)
Q Consensus       124 ---------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------  177 (228)
                                     .....++.++|||||||++|||++  |..||.+.+..+....+...........           
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~--g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV  235 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHh--CcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence                           234467999999999999999999  6699998888877766655422110000           


Q ss_pred             ---cCC-C-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 ---FLP-K-----PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ---~~~-~-----~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                         ..+ .     ....++++.+|+.+||+.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence               000 0     13467899999999999999999999999874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-34  Score=233.08  Aligned_cols=177  Identities=19%  Similarity=0.265  Sum_probs=134.0

Q ss_pred             CCceee-eeecccceeeEEEEEEeccCCCceeEEeecch--HHHHHHHHHHhh-CCCCCcceeeeeeeC----CCCCeEE
Q psy796           31 YCLRVL-ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--GDSLREIRFLSS-LQDPNLVSILGVCTG----EQPPWLV  102 (228)
Q Consensus        31 ~~~~~~-~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--~~~~~e~~~l~~-l~h~niv~~~g~~~~----~~~~~lv  102 (228)
                      ++|++. ++||+|+||.||+|....   +++.||||+++  ..+.+|+.++.+ .+||||+++++++.+    +...++|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv   87 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   87 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECC---CCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence            457776 579999999999999865   78999999995  668899998765 589999999999865    3467999


Q ss_pred             EeeccccCCHHHHhhhC-------------------------------Cccc----------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA-------------------------------DNLT----------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~-------------------------------r~l~----------------------------  123 (228)
                      |||| ++|+|.++|...                               |||+                            
T Consensus        88 mEy~-~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          88 MECL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             EECC-CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             EECC-CCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence            9999 999999999653                               4444                            


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCCCCCC
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC  185 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (228)
                                        +.+..|+.++|||||||++|||++  |..||.+.+.......+.............+....+
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~llt--g~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  244 (335)
T d2ozaa1         167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC--GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  244 (335)
T ss_dssp             CCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTT--SSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred             CCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhh--CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence                              445578999999999999999999  679998776655544443322211111001112357


Q ss_pred             cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          186 PRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       186 ~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ++++.+|+.+||+.||++|||+.++++|
T Consensus       245 s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         245 SEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            8999999999999999999999999885

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-32  Score=219.70  Aligned_cols=187  Identities=21%  Similarity=0.323  Sum_probs=143.2

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++++.||+|+||.||+|....   +++.||||+++         ..+.+|++++++++||||+++++++.+++..++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~i   78 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL   78 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeE
Confidence            578999999999999999999865   78899999983         557899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-------------------------------Cccc---------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-------------------------------DNLT---------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-------------------------------r~l~---------------------------  123 (228)
                      +|||+ . |++.+++...                               |||+                           
T Consensus        79 v~e~~-~-~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          79 VFEFL-H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             EEECC-S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             EEeec-C-CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc
Confidence            99998 7 4555444322                               5555                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----------  175 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------  175 (228)
                                        .....++.++|||||||++|||++  |..||.+.+..+....+.........          
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~--G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             ccceeecccceeeehhhhccccCCCccccccccchhhhHHhh--CCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc
Confidence                              223345899999999999999999  67999988877666555433211000          


Q ss_pred             --cccCCC---------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHHhccCCCC
Q psy796          176 --QVFLPK---------PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRSTNYKSNL  224 (228)
Q Consensus       176 --~~~~~~---------~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~~~~~~~~  224 (228)
                        ....+.         ...++.++++|+.+||+.||.+|||++|+++|  |+.+.+-.+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p~p~~  296 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL  296 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCCCCC
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCCCCCC
Confidence              000000         12467899999999999999999999999986  66664434443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=9.1e-32  Score=214.97  Aligned_cols=176  Identities=19%  Similarity=0.215  Sum_probs=139.3

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++.+.||+|+||.||+|...    +++.||||.++         ..+.+|+.++++++||||+++++++..++..++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i   77 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL   77 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeE
Confidence            47899999999999999999874    67899999983         568899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      ++||+ .++.+..+....                             |||+                             
T Consensus        78 ~~e~~-~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          78 VFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             EEECC-SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             EEEee-hhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence            99998 766666555433                             5555                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------------
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------------  175 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------  175 (228)
                                      .....++.++|||||||+++||++  |..||.+.+..+....+.........            
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~--G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN--GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY  234 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHH--CCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence                            234457899999999999999999  67999988877666555432211000            


Q ss_pred             cc---------cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QV---------FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~---------~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      ..         ....+..++.++.+++.+||+.||++|||++|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00         001134568899999999999999999999999864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=222.03  Aligned_cols=182  Identities=19%  Similarity=0.296  Sum_probs=127.7

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHH--HHHHhhCCCCCcceeeeeeeCCC----CCe
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLRE--IRFLSSLQDPNLVSILGVCTGEQ----PPW  100 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e--~~~l~~l~h~niv~~~g~~~~~~----~~~  100 (228)
                      ++|.+.+.||+|+||.||+|++     +++.||||.++    ..+.+|  +..+.+++||||++++|++.+++    ..+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-----~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            4578899999999999999987     67899999984    333344  44556789999999999997654    468


Q ss_pred             EEEeeccccCCHHHHhhhC------------------------------------Cccc---------------------
Q psy796          101 LVMEYPAQLGDLVQHLNSA------------------------------------DNLT---------------------  123 (228)
Q Consensus       101 lv~e~~~~~g~L~~~l~~~------------------------------------r~l~---------------------  123 (228)
                      +||||+ ++|+|.++|++.                                    |||+                     
T Consensus        78 lv~Ey~-~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          78 LVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEecc-cCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            999999 999999998765                                    4444                     


Q ss_pred             ---------------------------ccc------CCCCCccchHHHHHHHHHHHhcCCCCCCCCCC----------hH
Q psy796          124 ---------------------------RDR------DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLT----------NE  160 (228)
Q Consensus       124 ---------------------------~~~------~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~----------~~  160 (228)
                                                 ...      ..++.++|||||||++|||+||  ..||....          ..
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg--~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR--CSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT--BCBTTBCCCCCCTTTTTSCS
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhC--CCCCCcccccccchhhcccc
Confidence                                       000      1256789999999999999994  34432111          00


Q ss_pred             -HHHHHHHHhhhCCCccccCCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhcc
Q psy796          161 -QVIQNAEHMYYGGELQVFLPK---PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNY  220 (228)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~~~~  220 (228)
                       .....+.........++.++.   +..++.++.+|+.+||+.||.+|||+.+|++.|+++.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence             011112222222222111111   122345699999999999999999999999999999543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-32  Score=222.49  Aligned_cols=178  Identities=17%  Similarity=0.243  Sum_probs=141.8

Q ss_pred             ccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----------HHHHHHHHHHhhCCC-CCcceeeeeeeC
Q psy796           28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----------GDSLREIRFLSSLQD-PNLVSILGVCTG   95 (228)
Q Consensus        28 ~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----------~~~~~e~~~l~~l~h-~niv~~~g~~~~   95 (228)
                      +.-++|++++.||+|+||+||+|........++.||||.++           ..+.+|++++++++| +||+++++++.+
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~  100 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  100 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc
Confidence            34477999999999999999999875544467899999873           347799999999976 799999999999


Q ss_pred             CCCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------
Q psy796           96 EQPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------  123 (228)
                      ....+++|||+ .+|+|.+++...                             |||+                       
T Consensus       101 ~~~~~~v~e~~-~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         101 ETKLHLILDYI-NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             TTEEEEEECCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             CCceeeeeecc-cccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            99999999999 999999988654                             4444                       


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccC
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFL  179 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (228)
                                              .....++.++|||||||++|||++  |..||.+.+..+....+.......    ..
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyellt--G~~PF~~~~~~~~~~~i~~~~~~~----~~  253 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT--GASPFTVDGEKNSQAEISRRILKS----EP  253 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH--SSCTTSCTTSCCCHHHHHHHHHHC----CC
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcccC----CC
Confidence                                    122357889999999999999999  678998776554444444333221    34


Q ss_pred             CCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q psy796          180 PKPSLCPRDIYDLMCDCWKRDQTMRP-----TFKQIYS  212 (228)
Q Consensus       180 ~~~~~~~~~l~~li~~c~~~~p~~Rp-----s~~~v~~  212 (228)
                      +.|..++.++.+++.+||+.+|.+||     |++|+++
T Consensus       254 ~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            45678999999999999999999999     4888886

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.5e-31  Score=209.98  Aligned_cols=178  Identities=17%  Similarity=0.207  Sum_probs=139.0

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCCCCCeE
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWL  101 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~l  101 (228)
                      ++|++++.||+|+||+||+|+...   +++.||||+++         ..+.+|+.+++.++|+||+++++++.+....++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECC---CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeE
Confidence            468999999999999999999875   78899999983         557899999999999999999999999999999


Q ss_pred             EEeeccccCCHHHHhhhC-----------------------------Cccc-----------------------------
Q psy796          102 VMEYPAQLGDLVQHLNSA-----------------------------DNLT-----------------------------  123 (228)
Q Consensus       102 v~e~~~~~g~L~~~l~~~-----------------------------r~l~-----------------------------  123 (228)
                      +++++ .++++..++...                             |||+                             
T Consensus        79 v~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          79 VFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EEECC-SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC
T ss_pred             Eeeec-cccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCcc
Confidence            99999 888888776544                             4554                             


Q ss_pred             ----------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc------------
Q psy796          124 ----------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL------------  175 (228)
Q Consensus       124 ----------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------  175 (228)
                                      .....++.++|||||||+++||++|+ .++|.+.+..+....+.........            
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG-RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS-CCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCC-CCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence                            22334689999999999999999953 3445666666665555443221100            


Q ss_pred             ---------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ---------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ---------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               ......+..++.++.+|+.+||+.||.+|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     00011123467899999999999999999999999874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=212.98  Aligned_cols=163  Identities=20%  Similarity=0.264  Sum_probs=132.5

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecchH-------------HHHHHHHHHhhCC--CCCcceeeeeeeC
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRG-------------DSLREIRFLSSLQ--DPNLVSILGVCTG   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~~-------------~~~~e~~~l~~l~--h~niv~~~g~~~~   95 (228)
                      ++|++.+.||+|+||.||+|....   +++.||||.++.             .+.+|+.++++++  ||||+++++++.+
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            458999999999999999999876   789999998842             2568999999986  8999999999999


Q ss_pred             CCCCeEEEeecccc-CCHHHHhhhC-----------------------------Cccc----------------------
Q psy796           96 EQPPWLVMEYPAQL-GDLVQHLNSA-----------------------------DNLT----------------------  123 (228)
Q Consensus        96 ~~~~~lv~e~~~~~-g~L~~~l~~~-----------------------------r~l~----------------------  123 (228)
                      ++..+++|||+ .+ +++.+++...                             |||+                      
T Consensus        81 ~~~~~lv~e~~-~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          81 PDSFVLILERP-EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             SSEEEEEEECC-SSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCeEEEEEEec-cCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccce
Confidence            99999999998 64 6787777543                             5555                      


Q ss_pred             ---------------------cccCC-CCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ---------------------RDRDR-YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ---------------------~~~~~-~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                           ..+.. ++.++|||||||++|||++  |..||.+.+      .+...        ....
T Consensus       160 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~--g~~Pf~~~~------~i~~~--------~~~~  223 (273)
T d1xwsa_         160 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC--GDIPFEHDE------EIIRG--------QVFF  223 (273)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH------HHHHC--------CCCC
T ss_pred             ecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhh--CCCCCCCch------HHhhc--------ccCC
Confidence                                 22233 4678999999999999999  678987521      12221        3445


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      +..+++++++|+.+||+.||.+|||++++++|
T Consensus       224 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         224 RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            67899999999999999999999999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-31  Score=212.44  Aligned_cols=182  Identities=18%  Similarity=0.180  Sum_probs=136.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhC---CCCCcceeeeeeeC---
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSL---QDPNLVSILGVCTG---   95 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l---~h~niv~~~g~~~~---   95 (228)
                      ++|++++.||+|+||.||+|.....  .++.||||+++         ..+.+|+.+++.+   +||||+++++++..   
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CCEEEEEEEecccCeEEEEEEEECC--CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            5789999999999999999987531  46789999983         3467888877655   89999999999853   


Q ss_pred             --CCCCeEEEeeccccCCHHHHhhhC------------------------------Cccc--------------------
Q psy796           96 --EQPPWLVMEYPAQLGDLVQHLNSA------------------------------DNLT--------------------  123 (228)
Q Consensus        96 --~~~~~lv~e~~~~~g~L~~~l~~~------------------------------r~l~--------------------  123 (228)
                        ....+++|||+ .++.+.......                              |||+                    
T Consensus        85 ~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~  163 (305)
T d1blxa_          85 DRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  163 (305)
T ss_dssp             SSEEEEEEEEECC-SCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             ccCceEEEEEEec-cCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence              23578999999 866654332221                              5555                    


Q ss_pred             -----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-----
Q psy796          124 -----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-----  175 (228)
Q Consensus       124 -----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----  175 (228)
                                             +.+..++.++||||+||++|||++  |..||.+.+..+....+.........     
T Consensus       164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHH--CCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence                                   556789999999999999999999  67999998887776666543211100     


Q ss_pred             --------------cccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          176 --------------QVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       176 --------------~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                    .+....+..+++++++|+.+||+.||++|||+.|+++|  |+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                          00011234578899999999999999999999999875  4444

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-30  Score=212.32  Aligned_cols=183  Identities=18%  Similarity=0.203  Sum_probs=142.9

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      +.|+++ ++|++.+.||+|+||.||+|....   +++.||||+++         ..+.+|+++|++++|+|++++++++.
T Consensus        12 ~~~~~~-~rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~   87 (348)
T d2gfsa1          12 TIWEVP-ERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   87 (348)
T ss_dssp             SEEEEE-TTEEEEEECGGGTTSSEEEEEETT---TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ccccCC-CCeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            567775 459999999999999999998765   78999999983         35789999999999999999999986


Q ss_pred             CC-----CCCeEEEeeccccCCHHHHhhhC----------------------------Cccc------------------
Q psy796           95 GE-----QPPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT------------------  123 (228)
Q Consensus        95 ~~-----~~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~------------------  123 (228)
                      ..     ...+++++|+ .+|+|.+++...                            |||+                  
T Consensus        88 ~~~~~~~~~~~~i~~~~-~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg  166 (348)
T d2gfsa1          88 PARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG  166 (348)
T ss_dssp             SCSSTTTCCCCEEEEEC-CSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred             eccccccCceEEEEEee-cCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccc
Confidence            43     2346777888 889999988654                            5555                  


Q ss_pred             ------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccc--
Q psy796          124 ------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV--  177 (228)
Q Consensus       124 ------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--  177 (228)
                                              .....++.++|||||||++|||++  |..||.+.+.......+...........  
T Consensus       167 ~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~--g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT--GRTLFPGTDHIDQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             ---CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             hhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence                                    333457899999999999999999  6799998887766665544332111000  


Q ss_pred             ---------------cCC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          178 ---------------FLP------KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       178 ---------------~~~------~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                     ..+      ....+++++++||.+||+.||.+|||+.|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                           000      013578899999999999999999999999984

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-30  Score=210.27  Aligned_cols=186  Identities=19%  Similarity=0.255  Sum_probs=136.2

Q ss_pred             CcccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeee
Q psy796           24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCT   94 (228)
Q Consensus        24 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~   94 (228)
                      ..|++ +++|++++.||+|+||.||+|....   +++.||||+++         ..+.+|+++|+.++||||+++++++.
T Consensus        12 ~~~~~-~~~Y~~i~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~   87 (346)
T d1cm8a_          12 TAWEV-RAVYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT   87 (346)
T ss_dssp             SEECC-BSSEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             ceeec-CCcEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEec
Confidence            34666 4679999999999999999999865   78999999984         35789999999999999999999997


Q ss_pred             CCC------CCeEEEeeccccCCHHHHhhhC----------------------------Cccc-----------------
Q psy796           95 GEQ------PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT-----------------  123 (228)
Q Consensus        95 ~~~------~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~-----------------  123 (228)
                      ..+      ..+++|||+ . ++|..+++..                            |||+                 
T Consensus        88 ~~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Df  165 (346)
T d1cm8a_          88 PDETLDDFTDFYLVMPFM-G-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF  165 (346)
T ss_dssp             SCSSTTTCCCCEEEEECC-S-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             cCccccccceEEEEEecc-c-ccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccc
Confidence            654      469999998 4 6677665443                            5555                 


Q ss_pred             -------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----
Q psy796          124 -------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----  173 (228)
Q Consensus       124 -------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----  173 (228)
                                               .....++.++||||+||+++||++  |..||.+.+..+....+.......     
T Consensus       166 g~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
T d1cm8a_         166 GLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT--GKTLFKGSDHLDQLKEIMKVTGTPPAEFV  243 (346)
T ss_dssp             TTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             cceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHH--CcCCCCCCChHHHHHHHHhccCCCcHHHH
Confidence                                     223457899999999999999999  679998887766554443322110     


Q ss_pred             ------------------CccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          174 ------------------ELQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       174 ------------------~~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                        ...........+++++.+|+.+||+.||.+|||+.++++|  |+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence                              0000001134578899999999999999999999999985  5544

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.8e-30  Score=207.53  Aligned_cols=179  Identities=13%  Similarity=0.086  Sum_probs=131.4

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCCCCcc-eeeeeeeCCCCCeEEEee
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQDPNLV-SILGVCTGEQPPWLVMEY  105 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h~niv-~~~g~~~~~~~~~lv~e~  105 (228)
                      .|++.+.||+|+||.||+|....   +++.||||++.     ..+.+|+++++.++|+|++ .+.++....+..+++|||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECC---CCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            58999999999999999998865   78999999874     5688999999999877655 455555666778899999


Q ss_pred             ccccCCHHHHhhhC------------------------------Cccc--------------------------------
Q psy796          106 PAQLGDLVQHLNSA------------------------------DNLT--------------------------------  123 (228)
Q Consensus       106 ~~~~g~L~~~l~~~------------------------------r~l~--------------------------------  123 (228)
                      + . +++.+.+...                              |||+                                
T Consensus        85 ~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          85 L-G-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             C-C-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             c-C-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            8 5 6776655432                              4444                                


Q ss_pred             ----------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCccccCCC
Q psy796          124 ----------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPK  181 (228)
Q Consensus       124 ----------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                                            ..+..++.++|||||||++|||++  |..||......+....+..........+....
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~t--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTPIEVL  240 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHH--SSCTTCCCC-------HHHHHHHHHHSCHHHH
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHh--CCCcccccchHHHHHHHHHhhcccCCCChhHh
Confidence                                  334468999999999999999999  67999877665443333222111000001112


Q ss_pred             CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       182 ~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                      +..+|+++.+++..||+.+|++||+++++.+.|+.+
T Consensus       241 ~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            457899999999999999999999999998888877

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-29  Score=204.08  Aligned_cols=177  Identities=16%  Similarity=0.219  Sum_probs=133.6

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE-----   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----   96 (228)
                      ++|++++.||+|+||+||+|....   +++.||||++.         ..+.+|+.+|++++|+|++++++++...     
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence            568999999999999999999865   78999999873         4578999999999999999999988552     


Q ss_pred             ---CCCeEEEeeccccCCHHHHhhhC-----------------------------Cccc---------------------
Q psy796           97 ---QPPWLVMEYPAQLGDLVQHLNSA-----------------------------DNLT---------------------  123 (228)
Q Consensus        97 ---~~~~lv~e~~~~~g~L~~~l~~~-----------------------------r~l~---------------------  123 (228)
                         ...+++|||+ .++.+..+....                             |||+                     
T Consensus        87 ~~~~~~~iv~e~~-~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          87 RCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             ----CEEEEEECC-CEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ccCceEEEEEecc-CCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceee
Confidence               3578999999 866665443322                             4554                     


Q ss_pred             ----------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc
Q psy796          124 ----------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL  175 (228)
Q Consensus       124 ----------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  175 (228)
                                                  .....++.++|||||||+++||++  |..||.+.+.......+.........
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLALISQLCGSITP  243 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhh--CCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence                                        123468899999999999999999  67999988877766665554321110


Q ss_pred             cccCC-----------C---C----------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 QVFLP-----------K---P----------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ~~~~~-----------~---~----------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                      .....           .   .          ...+.++.+|+.+||+.||++|||++|+++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            00000           0   0          0135678899999999999999999999975

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-29  Score=207.22  Aligned_cols=186  Identities=17%  Similarity=0.209  Sum_probs=137.2

Q ss_pred             cccccCCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch--------HHHHHHHHHHhhCCCCCcceeeeeeeCC
Q psy796           25 VVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVSILGVCTGE   96 (228)
Q Consensus        25 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~--------~~~~~e~~~l~~l~h~niv~~~g~~~~~   96 (228)
                      .++|..+ |++++.||+|+||.||+|....   +++.||||.++        ..+++|+++|++++|+|++++++++...
T Consensus         3 ~~~i~~r-Y~~~~~LG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~   78 (345)
T d1pmea_           3 VFDVGPR-YTNLSYIGEGAYGMVCSAYDNV---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP   78 (345)
T ss_dssp             CCCCCTT-EEEEEECC---CCCEEEEEETT---TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCS
T ss_pred             ccCcCCC-eEEEEEEeeccCeEEEEEEECC---CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeec
Confidence            4555554 9999999999999999998765   78999999983        4578999999999999999999998765


Q ss_pred             C----CCeEEEeeccccCCHHHHhhhC----------------------------Cccc---------------------
Q psy796           97 Q----PPWLVMEYPAQLGDLVQHLNSA----------------------------DNLT---------------------  123 (228)
Q Consensus        97 ~----~~~lv~e~~~~~g~L~~~l~~~----------------------------r~l~---------------------  123 (228)
                      +    ..+++++|+ .+|+|.+++...                            |||+                     
T Consensus        79 ~~~~~~~~~l~~~~-~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~  157 (345)
T d1pmea_          79 TIEQMKDVYLVTHL-MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  157 (345)
T ss_dssp             STTTCCCEEEEEEC-CCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccccceEEEEEee-cCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCcee
Confidence            3    235566677 789999998654                            5555                     


Q ss_pred             ---------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc-
Q psy796          124 ---------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-  175 (228)
Q Consensus       124 ---------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-  175 (228)
                                                 .....++.++||||+||+++||++  |..||.+.+..+.............. 
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~--g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS--NRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhh--CCCCCCCCCHHHHHHHHhhhccCCChh
Confidence                                       244567899999999999999999  67999887766554443322111000 


Q ss_pred             -----------------c--ccCC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          176 -----------------Q--VFLP---KPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       176 -----------------~--~~~~---~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                                       .  ...+   ....++.++.+|+.+||+.||.+|||+.++++|  |+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                             0  0000   123567889999999999999999999999986  5433

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-30  Score=210.30  Aligned_cols=180  Identities=16%  Similarity=0.130  Sum_probs=133.7

Q ss_pred             CceeeeeecccceeeEEEEEEeccCCCceeEEeecch---HHHHHHHHHHhhCCCCCcceeeeeeeCC------CCCeEE
Q psy796           32 CLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---GDSLREIRFLSSLQDPNLVSILGVCTGE------QPPWLV  102 (228)
Q Consensus        32 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---~~~~~e~~~l~~l~h~niv~~~g~~~~~------~~~~lv  102 (228)
                      +|+..++||+|+||+||+|+...   +++.||||+++   ....+|+++|++++|+||+++++++...      ..++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECC---CCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            47788999999999999999876   78999999995   3356899999999999999999998532      236899


Q ss_pred             EeeccccCCHHHHhh---hC-----------------------------Cccc---------------------------
Q psy796          103 MEYPAQLGDLVQHLN---SA-----------------------------DNLT---------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~---~~-----------------------------r~l~---------------------------  123 (228)
                      |||+ +++.+.....   ..                             |||+                           
T Consensus        98 ~Ey~-~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_          98 LDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             EECC-SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             Eecc-CCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence            9999 7553322211   11                             5555                           


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCC-----------C
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGG-----------E  174 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~  174 (228)
                                        .....++.++||||+||++|||++  |..||...+..+....+.......           .
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~--g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~  254 (350)
T d1q5ka_         177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL--GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY  254 (350)
T ss_dssp             SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH--TSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC--
T ss_pred             cccccccccccccChHHhhcccCCCcceeecccceEEEehhh--CCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccch
Confidence                              334568999999999999999999  679998887766555443321100           0


Q ss_pred             ccccC----------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH--HHHH
Q psy796          175 LQVFL----------PKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF--MKRS  217 (228)
Q Consensus       175 ~~~~~----------~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~--l~~~  217 (228)
                      .....          .....+++++.+|+.+||+.||.+|||+.|+++|  |+.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             -CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            00000          1123578899999999999999999999999974  5555

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=207.71  Aligned_cols=176  Identities=19%  Similarity=0.197  Sum_probs=130.9

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch---------HHHHHHHHHHhhCCCCCcceeeeeeeCC-----
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR---------GDSLREIRFLSSLQDPNLVSILGVCTGE-----   96 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~---------~~~~~e~~~l~~l~h~niv~~~g~~~~~-----   96 (228)
                      ++|++++.||+|+||+||+|....   +++.||||+++         ..+.+|+.++++++||||+++++++...     
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~---t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETT---TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             CCeEEEEEeecCcCeEEEEEEECC---CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc
Confidence            348999999999999999999875   78999999984         3478999999999999999999999643     


Q ss_pred             -CCCeEEEeeccccCCHHHHhhhC---------------------------Cccc-------------------------
Q psy796           97 -QPPWLVMEYPAQLGDLVQHLNSA---------------------------DNLT-------------------------  123 (228)
Q Consensus        97 -~~~~lv~e~~~~~g~L~~~l~~~---------------------------r~l~-------------------------  123 (228)
                       ...+++|||+ .++ +.+.+...                           |||+                         
T Consensus        94 ~~~~~iv~Ey~-~~~-l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1          94 FQDVYLVMELM-DAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             CCEEEEEEECC-SEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             CceeEEEEecc-chH-HHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc
Confidence             4569999999 754 44444332                           5555                         


Q ss_pred             ------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHhhhCCCc----------
Q psy796          124 ------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL----------  175 (228)
Q Consensus       124 ------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------  175 (228)
                                        +.+..++.++||||+||+++||++  |..||.+.+.......+.........          
T Consensus       172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~--g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (355)
T d2b1pa1         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_dssp             ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH
T ss_pred             ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhh--CCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH
Confidence                              456678999999999999999999  66999887766555444332211000          


Q ss_pred             ---------ccc------C---CCC------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          176 ---------QVF------L---PKP------SLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       176 ---------~~~------~---~~~------~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                               ...      .   ..+      ...+.++.+|+.+||+.||++|||++|+++|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                     000      0   000      1135678999999999999999999999974

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=4.6e-29  Score=199.81  Aligned_cols=178  Identities=12%  Similarity=0.118  Sum_probs=139.9

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch-----HHHHHHHHHHhhCCC-CCcceeeeeeeCCCCCeEEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-----GDSLREIRFLSSLQD-PNLVSILGVCTGEQPPWLVM  103 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-----~~~~~e~~~l~~l~h-~niv~~~g~~~~~~~~~lv~  103 (228)
                      ..+|++++.||+|+||.||+|....   +++.||||++.     ..+.+|++.+..+.| +|++.+++++......+++|
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            3578999999999999999999865   78999999873     447899999999965 89999999999888899999


Q ss_pred             eeccccCCHHHHhhhC------------------------------Cccc------------------------------
Q psy796          104 EYPAQLGDLVQHLNSA------------------------------DNLT------------------------------  123 (228)
Q Consensus       104 e~~~~~g~L~~~l~~~------------------------------r~l~------------------------------  123 (228)
                      ||+ . ++|.+++...                              |||+                              
T Consensus        81 e~~-~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          81 DLL-G-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             ECC-C-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             Eec-C-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            998 4 8999887643                              4444                              


Q ss_pred             --------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH---HHHHHHHHhhhCCC
Q psy796          124 --------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE---QVIQNAEHMYYGGE  174 (228)
Q Consensus       124 --------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~  174 (228)
                                                +.+..++.++||||||+++|||++  |..||.+....   .....+........
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ellt--g~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR--GSLPWQGLKAATNKQKYERIGEKKQSTP  236 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHh--CCCcCCCccchhHHHHHHHHHhccCCCC
Confidence                                      334468899999999999999999  67999765443   22333322221100


Q ss_pred             ccccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy796          175 LQVFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS  217 (228)
Q Consensus       175 ~~~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~l~~~  217 (228)
                         ....+..+|+++.+++..||+.+|++||+++.+.+.|+++
T Consensus       237 ---~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         237 ---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             ---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             ---hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence               0112356889999999999999999999999998888876

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=1.4e-28  Score=199.91  Aligned_cols=178  Identities=21%  Similarity=0.326  Sum_probs=131.7

Q ss_pred             CCCceeeeeecccceeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCC-CCCcceeeeeeeCC--CCCeEE
Q psy796           30 RYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQ-DPNLVSILGVCTGE--QPPWLV  102 (228)
Q Consensus        30 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~-h~niv~~~g~~~~~--~~~~lv  102 (228)
                      .++|++++.||+|+||.||+|+...   +++.||||+++    ..+.+|+++|.++. |+||+++++++...  ...+++
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            3568999999999999999998865   78999999984    66889999999985 99999999998754  457899


Q ss_pred             EeeccccCCHHHHhhhC--------------------------Cccc---------------------------------
Q psy796          103 MEYPAQLGDLVQHLNSA--------------------------DNLT---------------------------------  123 (228)
Q Consensus       103 ~e~~~~~g~L~~~l~~~--------------------------r~l~---------------------------------  123 (228)
                      |||| .+++|..+....                          |||+                                 
T Consensus       111 ~e~~-~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~  189 (328)
T d3bqca1         111 FEHV-NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  189 (328)
T ss_dssp             EECC-CSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSC
T ss_pred             Eeec-CCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCccccc
Confidence            9999 999987654322                          5555                                 


Q ss_pred             ------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCCh-HHHHHHHHHhhh-----------CCCcc---
Q psy796          124 ------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYY-----------GGELQ---  176 (228)
Q Consensus       124 ------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~-----------~~~~~---  176 (228)
                                  .....++.++||||+||+++||++  +..||..... .+....+.....           .....   
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~--g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~  267 (328)
T d3bqca1         190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF--RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  267 (328)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH--TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred             ccCccccCcccccCCCCCCcccchhhhhhhhHHhcc--CCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence                        223457899999999999999999  5577765433 222222211100           00000   


Q ss_pred             ---------------ccCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy796          177 ---------------VFLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSF  213 (228)
Q Consensus       177 ---------------~~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~~~  213 (228)
                                     ........+++++.+|+.+||+.||.+|||++++++|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                           0000113367899999999999999999999999863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=5.3e-24  Score=174.67  Aligned_cols=177  Identities=16%  Similarity=0.259  Sum_probs=117.1

Q ss_pred             CCceeeeeecccceeeEEEEEEeccCCCceeEEeecch------HHHHHHHHHHhhCC-----------CCCcceeeeee
Q psy796           31 YCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR------GDSLREIRFLSSLQ-----------DPNLVSILGVC   93 (228)
Q Consensus        31 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~------~~~~~e~~~l~~l~-----------h~niv~~~g~~   93 (228)
                      ..|+++++||+|+||+||+|+...   +++.||||+++      +.+.+|+.+++.++           |+||+++++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~---~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            458999999999999999999865   78999999984      44678888887764           57899999887


Q ss_pred             eCC--CCCeEEEeeccccCC-HHH---------------------------Hhhh-C----Cccc---------------
Q psy796           94 TGE--QPPWLVMEYPAQLGD-LVQ---------------------------HLNS-A----DNLT---------------  123 (228)
Q Consensus        94 ~~~--~~~~lv~e~~~~~g~-L~~---------------------------~l~~-~----r~l~---------------  123 (228)
                      ...  ...+++++++ ..+. ...                           +|+. .    |||+               
T Consensus        90 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EEEETTEEEEEEEEC-CCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             eeccccceeeeeeec-ccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence            543  3456666665 3332 222                           2222 1    5555               


Q ss_pred             --------------------------------cccCCCCCccchHHHHHHHHHHHhcCCCCCCCCCChH------HHHHH
Q psy796          124 --------------------------------RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE------QVIQN  165 (228)
Q Consensus       124 --------------------------------~~~~~~~~~~Dv~s~Gv~l~el~~~~~~~p~~~~~~~------~~~~~  165 (228)
                                                      .....++.++||||+||+++||++  |..||...+..      +....
T Consensus       169 ~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~--g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT--GDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH--SSCCC---------CHHHHHHH
T ss_pred             ceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHH--CCCCCCCCccccccchhHHHHH
Confidence                                            344568899999999999999999  56888654321      11111


Q ss_pred             HHHhhhC------------------CCccc----------------cCCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHH
Q psy796          166 AEHMYYG------------------GELQV----------------FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIY  211 (228)
Q Consensus       166 ~~~~~~~------------------~~~~~----------------~~~~~~~~~~~l~~li~~c~~~~p~~Rps~~~v~  211 (228)
                      .......                  .....                ....+...+.++.+|+.+|++.||.+|||++|++
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            1110000                  00000                0001122356899999999999999999999998


Q ss_pred             HH
Q psy796          212 SF  213 (228)
Q Consensus       212 ~~  213 (228)
                      +|
T Consensus       327 ~H  328 (362)
T d1q8ya_         327 NH  328 (362)
T ss_dssp             TC
T ss_pred             cC
Confidence            75

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.04  E-value=2.1e-10  Score=84.61  Aligned_cols=71  Identities=17%  Similarity=0.193  Sum_probs=56.1

Q ss_pred             eeeeeecccceeeEEEEEEeccCCCceeEEeecch-------------------------HHHHHHHHHHhhCCCCCcce
Q psy796           34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------------------------GDSLREIRFLSSLQDPNLVS   88 (228)
Q Consensus        34 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------------------------~~~~~e~~~l~~l~h~niv~   88 (228)
                      .+++.||+|+||.||+|...    ++..||||+++                         ....+|...+.++.|.+++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~----~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~   78 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE----KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK   78 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET----TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             hhCCEeeeCcceEEEEEECC----CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence            57899999999999999864    67899999752                         12346788899999999998


Q ss_pred             eeeeeeCCCCCeEEEeeccccCCHH
Q psy796           89 ILGVCTGEQPPWLVMEYPAQLGDLV  113 (228)
Q Consensus        89 ~~g~~~~~~~~~lv~e~~~~~g~L~  113 (228)
                      .+++.    ..+++|||+ +++.+.
T Consensus        79 ~~~~~----~~~lvme~~-~~~~~~   98 (191)
T d1zara2          79 VYAWE----GNAVLMELI-DAKELY   98 (191)
T ss_dssp             EEEEE----TTEEEEECC-CCEEGG
T ss_pred             EEEec----CCEEEEEee-cccccc
Confidence            87664    347999998 765553

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.80  E-value=0.26  Score=35.85  Aligned_cols=78  Identities=12%  Similarity=0.026  Sum_probs=53.4

Q ss_pred             ceeeeeecccceeeEEEEEEeccCCCceeEEeecch-------HHHHHHHHHHhhCC-CCCcceeeeeeeCCCCCeEEEe
Q psy796           33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR-------GDSLREIRFLSSLQ-DPNLVSILGVCTGEQPPWLVME  104 (228)
Q Consensus        33 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vavK~~~-------~~~~~e~~~l~~l~-h~niv~~~g~~~~~~~~~lv~e  104 (228)
                      ++..+..+-++.+.||+...     ++..+.+|...       ..+.+|...+..+. +--+.+++.+...++..+++|+
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~-----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~   90 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEcCCCCCCCcEEEEEe-----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEE
Confidence            45555434444578998754     55667777763       34678888887764 3335677777777777899999


Q ss_pred             eccccCCHHHHh
Q psy796          105 YPAQLGDLVQHL  116 (228)
Q Consensus       105 ~~~~~g~L~~~l  116 (228)
                      ++ ++.++.+..
T Consensus        91 ~l-~G~~~~~~~  101 (263)
T d1j7la_          91 EA-DGVLCSEEY  101 (263)
T ss_dssp             CC-SSEEHHHHT
T ss_pred             ec-ccccccccc
Confidence            99 988876554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=83.79  E-value=0.8  Score=32.84  Aligned_cols=69  Identities=19%  Similarity=0.145  Sum_probs=48.0

Q ss_pred             cccc-eeeEEEEEEeccCCCceeEEeecch----HHHHHHHHHHhhCCCCC--cceeeeeeeCCCCCeEEEeeccccCCH
Q psy796           40 GSCH-LGEMMICETEDIELDTEKVAVRTCR----GDSLREIRFLSSLQDPN--LVSILGVCTGEQPPWLVMEYPAQLGDL  112 (228)
Q Consensus        40 g~G~-fg~V~~~~~~~~~~~~~~vavK~~~----~~~~~e~~~l~~l~h~n--iv~~~g~~~~~~~~~lv~e~~~~~g~L  112 (228)
                      ..|. .+.||+....    .+..+.+|...    ..+.+|...++.+....  +.+++++..+.+..+++|+++ ++.++
T Consensus        19 ~~G~s~~~v~r~~~~----~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i-~G~~~   93 (255)
T d1nd4a_          19 TIGCSDAAVFRLSAQ----GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV-PGQDL   93 (255)
T ss_dssp             SCTTSSCEEEEEECT----TSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC-SSEET
T ss_pred             CCcccCCeEEEEEeC----CCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEee-ecccc
Confidence            4443 3678877653    45668888774    45788888887764333  457787777777889999999 86555


Q ss_pred             H
Q psy796          113 V  113 (228)
Q Consensus       113 ~  113 (228)
                      .
T Consensus        94 ~   94 (255)
T d1nd4a_          94 L   94 (255)
T ss_dssp             T
T ss_pred             c
Confidence            3