Psyllid ID: psy9091

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
MSKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVTSI
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccccEEEccccccEEEEEEEEcccccccccccccccccccHHcccccccccEEEHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHccccccccccccccHccccccccEEEEEEEEccccccEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHcccccHHHEEEEEEEccccccEEEEEEEcccccccccccccccccHHccccccccEEHEEEEcccHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MSKTFHELAQEKRkreaempppralkpdeldldnlqdcgdryelgyvigsgvCADVYEaldtqngnkkVSIKVQKINPEFIDDIKEEYRMLRDlsqhsnipdfFGAYMKKHQTHSEIWFVMQReaempppralkpdeldldnlqdcgdryelgyvigsgvcadvyealdtqnvtsi
Flexible Loop (DISEMBL)
MSKTFHELAQekrkreaempppralkpdeldlDNLQDCGDRYELGYVIGSGVCADVYEALdtqngnkkvsikvqkinpeFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVTSI
Low Complexity Region (SEG)
MSKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVTSI
Disordered region (IsUnstruct)
********************************DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ*****************LDNLQDCGDRYELGYVIGSGVCADVYEALD*******
Disordered Region (DISOPRED)
***********************************QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRAL*PDEL*****QDCGDRYELGYVIGSGVCADVYEALDTQN****
Disordered Region (DISEMBL)
********************PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVTSI
Disordered Region (DISPRO)
************************LKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVTSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	176	2.2.26 [Sep-21-2011]
Q23356	1096	Serine/threonine-protein	yes	N/A	0.534	0.085	0.343	2e-10
P10676	1501	Neither inactivation nor	yes	N/A	0.494	0.057	0.404	4e-10
P83510	1323	Traf2 and NCK-interacting	yes	N/A	0.562	0.074	0.336	1e-09
Q9UKE5	1360	TRAF2 and NCK-interacting	yes	N/A	0.562	0.072	0.336	1e-09
Q9JM52	1308	Misshapen-like kinase 1 O	no	N/A	0.562	0.075	0.336	2e-09
Q8N4C8	1332	Misshapen-like kinase 1 O	no	N/A	0.562	0.074	0.336	2e-09
Q8NEV4	1616	Myosin-IIIa OS=Homo sapie	no	N/A	0.511	0.055	0.315	2e-08
Q8K3H5	1613	Myosin-IIIa OS=Mus muscul	no	N/A	0.511	0.055	0.315	6e-08
O95819	1239	Mitogen-activated protein	no	N/A	0.528	0.075	0.322	6e-08
F1LP90	1336	Misshapen-like kinase 1 O	no	N/A	0.573	0.075	0.317	8e-08

>sp|Q23356|MIG15_CAEEL Serine/threonine-protein kinase mig-15 OS=Caenorhabditis elegans GN=mig-15 PE=2 SV=3

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 5/99 (5%)

Query: 28  DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEE 87
           DE+DL++L+D    +EL  V+G+G    VY+    +   +  +IK+  IN +  D+IK E
Sbjct: 7   DEIDLNSLRDPAGIFELIEVVGNGTYGQVYKGRHVKTA-QLAAIKIMNINEDEEDEIKLE 65

Query: 88  YRMLRDLSQHSNIPDFFGAYMKKHQT----HSEIWFVMQ 122
             ML+  S H N+  ++GA++KK  +    H ++W VM+
Sbjct: 66  INMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVME 104

Involved in cell migration and signal transduction. Important in several developmental processes including epidermal development, Q neuroblast migrations and muscle arm targeting. Required with ina-1/pat-3 to stabilize the commissural axons growth cone along a precise direction and are required for the cell to respond appropriately when signaling in the growth cone must change.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P10676|NINAC_DROME Neither inactivation nor afterpotential protein C OS=Drosophila melanogaster GN=ninaC PE=1 SV=2

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 35  LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDL 94
           L D  D++E+   I  GV A V+ A +  N ++ V++K+Q  + E    I+EEYR LRD 
Sbjct: 9   LPDPTDKFEIYEEIAQGVNAKVFRAKELDN-DRIVALKIQHYDEEHQVSIEEEYRTLRDY 67

Query: 95  SQHSNIPDFFGAY-MKKHQTHSEIWFVMQ 122
             H N+P+F+G Y + K     EIWFVM+
Sbjct: 68  CDHPNLPEFYGVYKLSKPNGPDEIWFVME 96

Required for photoreceptor cell function. The ninaC proteins combines putative serine/threonine-protein kinase and myosin activities.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P83510|TNIK_MOUSE Traf2 and NCK-interacting protein kinase OS=Mus musculus GN=Tnik PE=1 SV=2

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + G +  +IKV  +  + 
Sbjct: 6   PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDE 62

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--THSEIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK+      ++W VM+
Sbjct: 63  EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 106

Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + G +  +IKV  +  + 
Sbjct: 6   PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDE 62

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--THSEIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK+      ++W VM+
Sbjct: 63  EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 106

Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading. Phosphorylates SMAD1 on Thr-322.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9JM52|MINK1_MOUSE Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=3

 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P R+L  D++DL  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  + 
Sbjct: 6   PARSL--DDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDE 62

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS--EIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK    +  ++W VM+
Sbjct: 63  EEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVME 106

Serine/threonine kinase which acts as a negative regulator of Ras-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8N4C8|MINK1_HUMAN Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=2

 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P R+L  D++DL  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  + 
Sbjct: 6   PARSL--DDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDE 62

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS--EIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK    +  ++W VM+
Sbjct: 63  EEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVME 106

Isoform 4 can activate the JNK pathway. Involved in the regulation of actin cytoskeleton reorganization, cell-matrix adhesion, cell-cell adhesion and cell migration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8NEV4|MYO3A_HUMAN Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=2 SV=2

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +L
Sbjct: 11  FDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDIDEEIEAEYNIL 69

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHS-EIWFVMQ 122
           + LS H N+  F+G Y KK + +  ++W V++
Sbjct: 70  KALSDHPNVVRFYGIYFKKDKVNGDKLWLVLE 101

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8K3H5|MYO3A_MOUSE Myosin-IIIa OS=Mus musculus GN=Myo3a PE=2 SV=1

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            DN  D  D +E+   IG G    V++ L+ ++G +K ++K+     +  ++I+ EY +L
Sbjct: 11  FDNFPDPSDTWEIIETIGKGTYGKVFKVLNKKSG-QKAAVKILDPIHDIDEEIEAEYNIL 69

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHS-EIWFVMQ 122
           R LS H N+  F+G Y KK + +  ++W V++
Sbjct: 70  RTLSDHPNVVRFYGIYFKKDKINGDKLWLVLE 101

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 29  ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY 88
           ++DL +L+D    +EL  V+G+G    VY+    + G +  +IKV  +  +  ++IK E 
Sbjct: 12  DIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDEEEEIKLEI 70

Query: 89  RMLRDLSQHSNIPDFFGAYMKKHQTHS--EIWFVMQ 122
            ML+  S H NI  ++GA++KK       ++W VM+
Sbjct: 71  NMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVME 106

Serine/threonine kinase that may play a role in the response to environmental stress and cytokines such as TNF-alpha. Appears to act upstream of the JUN N-terminal pathway. Phosphorylates SMAD1 on Thr-322.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|F1LP90|MINK1_RAT Misshapen-like kinase 1 OS=Rattus norvegicus GN=Mink1 PE=1 SV=2

 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P  A + D + L  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  + 
Sbjct: 4   PAPARQSDFIFLVALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDE 62

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS--EIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK    +  ++W VM+
Sbjct: 63  EEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVME 106

Serine/threonine kinase which acts as a negative regulator ofRas-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
383865054	1583	PREDICTED: neither inactivation nor afte	0.517	0.057	0.542	7e-22
340709081	1589	PREDICTED: neither inactivation nor afte	0.517	0.057	0.531	2e-21
340709079	1586	PREDICTED: neither inactivation nor afte	0.517	0.057	0.531	2e-21
350419389	1589	PREDICTED: neither inactivation nor afte	0.517	0.057	0.531	2e-21
322788655	1553	hypothetical protein SINV_08357 [Solenop	0.517	0.058	0.531	2e-21
328792346	1587	PREDICTED: neither inactivation nor afte	0.517	0.057	0.542	7e-21
158298612	1581	AGAP009730-PA [Anopheles gambiae str. PE	0.528	0.058	0.547	1e-20
345486208	1621	PREDICTED: neither inactivation nor afte	0.539	0.058	0.53	1e-20
312378325	626	hypothetical protein AND_10171 [Anophele	0.528	0.148	0.547	2e-20
157106155	1561	myosin [Aedes aegypti] gi|108884128|gb|E	0.528	0.059	0.521	2e-20

>gi|383865054|ref|XP_003707990.1| PREDICTED: neither inactivation nor afterpotential protein C-like [Megachile rotundata]

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
           LD++QD G RY L   IGSGVC DVYEA+D Q GNK+V++KVQK+ PE    I EEY++L
Sbjct: 37  LDSIQDPGKRYLLRECIGSGVCGDVYEAIDQQAGNKRVAVKVQKLTPESQSLIIEEYKVL 96

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           RD + H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 97  RDFASHPNLPDFYGIYRRRSGKKTEYDQIWFVME 130

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709081|ref|XP_003393143.1| PREDICTED: neither inactivation nor afterpotential protein C-like isoform 2 [Bombus terrestris]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            D++QD G RY L   IGSGVC DVYEA+D Q GNK+V++KVQK+ PE    I EEY++L
Sbjct: 39  FDSIQDPGKRYLLRECIGSGVCGDVYEAIDQQAGNKRVAVKVQKLTPESQSLIIEEYKIL 98

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           RD + H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 99  RDFASHPNLPDFYGIYRRRSGKKTEYDQIWFVME 132

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709079|ref|XP_003393142.1| PREDICTED: neither inactivation nor afterpotential protein C-like isoform 1 [Bombus terrestris]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            D++QD G RY L   IGSGVC DVYEA+D Q GNK+V++KVQK+ PE    I EEY++L
Sbjct: 39  FDSIQDPGKRYLLRECIGSGVCGDVYEAIDQQAGNKRVAVKVQKLTPESQSLIIEEYKIL 98

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           RD + H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 99  RDFASHPNLPDFYGIYRRRSGKKTEYDQIWFVME 132

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419389|ref|XP_003492164.1| PREDICTED: neither inactivation nor afterpotential protein C-like [Bombus impatiens]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            D++QD G RY L   IGSGVC DVYEA+D Q GNK+V++KVQK+ PE    I EEY++L
Sbjct: 39  FDSIQDPGKRYLLRECIGSGVCGDVYEAIDQQAGNKRVAVKVQKLTPESQSLIIEEYKIL 98

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           RD + H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 99  RDFASHPNLPDFYGIYRRRSGKKTEYDQIWFVME 132

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788655|gb|EFZ14256.1| hypothetical protein SINV_08357 [Solenopsis invicta]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
           LD++QD G RY L   IGSG+C +VYE +D Q GNKKV+IK+QK+ PE    I EEYR+L
Sbjct: 31  LDSIQDPGKRYSLQDCIGSGICGNVYEGIDRQAGNKKVAIKIQKLTPETQSLIVEEYRIL 90

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHS---EIWFVMQ 122
           RD + H N+P+F+G Y K+    S   E+WFVM+
Sbjct: 91  RDFAGHPNLPEFYGIYRKRSAKKSEYDEMWFVME 124

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792346|ref|XP_393429.3| PREDICTED: neither inactivation nor afterpotential protein C isoform 1 [Apis mellifera]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 3/94 (3%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
           LD++QD G RY L   IGSGVC DVYEA+D Q  NK+V++KVQK+ PE    I EEYR+L
Sbjct: 36  LDSIQDPGKRYLLRDCIGSGVCGDVYEAIDRQAENKRVAVKVQKLTPESESMILEEYRIL 95

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           RD + H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 96  RDYTSHPNLPDFYGIYRRRSGKKTEYDQIWFVME 129

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158298612|ref|XP_318814.4| AGAP009730-PA [Anopheles gambiae str. PEST] gi|157013968|gb|EAA14178.4| AGAP009730-PA [Anopheles gambiae str. PEST]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 30  LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYR 89
           L ++ L D G+RY+LG +IGSGVCA VY A DTQ GNK V+IKVQK   E    I+EE+R
Sbjct: 4   LKIETLPDPGNRYKLGELIGSGVCAKVYRATDTQAGNKNVAIKVQKFEGETKTAIQEEFR 63

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHS--EIWFVMQ 122
           +LRD S+H+N+ DF+G Y KK       EIWFV++
Sbjct: 64  ILRDHSKHANLIDFYGIYRKKCPAGECDEIWFVLE 98

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486208|ref|XP_001603221.2| PREDICTED: neither inactivation nor afterpotential protein C [Nasonia vitripennis]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 71/100 (71%), Gaps = 5/100 (5%)

Query: 27  PDELD-LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIK 85
           P++L  LD++QD G RY L   IGSGVC DVYEA+D + G++KV+IK+QK+ PE    I 
Sbjct: 59  PEKLQRLDSIQDPGKRYALRDRIGSGVCGDVYEAID-EEGSRKVAIKIQKLTPETQPLIV 117

Query: 86  EEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE---IWFVMQ 122
           EEYR+LRD S H N+PDF+G Y ++    +E   IWFVM+
Sbjct: 118 EEYRVLRDFSSHPNLPDFYGVYRRRSGKKTEYDQIWFVME 157

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378325|gb|EFR24935.1| hypothetical protein AND_10171 [Anopheles darlingi]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 30  LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYR 89
           L ++ L D G+RY LG +IGSGVCA VY A DTQ GNK V+IKVQK   E    I+EE+R
Sbjct: 89  LRIETLPDPGNRYTLGELIGSGVCAKVYRATDTQAGNKSVAIKVQKFEGETKIAIQEEFR 148

Query: 90  MLRDLSQHSNIPDFFGAYMKK--HQTHSEIWFVMQ 122
           +LRD S+H+N+ DF+G Y KK     + EIWFV++
Sbjct: 149 ILRDHSKHANLLDFYGVYRKKCPAGENDEIWFVLE 183

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106155|ref|XP_001649192.1| myosin [Aedes aegypti] gi|108884128|gb|EAT48353.1| AAEL000596-PA [Aedes aegypti]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 1/94 (1%)

Query: 30  LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYR 89
           L +D L + G+RY+LG VIG+GVCA VY+A+DT+  NK V+IK+QK   E    I+EEYR
Sbjct: 4   LKIDTLPEPGNRYQLGEVIGTGVCAKVYKAVDTKASNKNVAIKIQKYEAELKTAIQEEYR 63

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHS-EIWFVMQ 122
           +LRD S H N+ DF+G Y KK    + EIWF+++
Sbjct: 64  ILRDYSNHGNLLDFYGVYRKKVPGDADEIWFILE 97

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
WB|WBGene00003247	1096	mig-15 [Caenorhabditis elegans	0.534	0.085	0.343	1.3e-12
UNIPROTKB|F5H0U9	664	MYO3A "Myosin-IIIa" [Homo sapi	0.505	0.134	0.318	7.1e-11
FB|FBgn0002938	1501	ninaC "neither inactivation no	0.494	0.057	0.404	7.2e-11
UNIPROTKB|B1ANA3	197	MYO3A "Myosin-IIIa" [Homo sapi	0.505	0.451	0.318	9.4e-11
UNIPROTKB|E2RQX5	1613	MYO3A "Uncharacterized protein	0.505	0.055	0.329	1.2e-10
UNIPROTKB|Q4G0X2	247	MYO3A "Myosin-IIIa" [Homo sapi	0.505	0.360	0.318	1.2e-10
RGD|1560083	1614	Myo3a "myosin IIIA" [Rattus no	0.505	0.055	0.329	3.1e-10
MGI|MGI:1355329	1308	Mink1 "misshapen-like kinase 1	0.562	0.075	0.336	4.4e-10
UNIPROTKB|F6Q3P6	1309	MINK1 "Uncharacterized protein	0.562	0.075	0.336	4.4e-10
UNIPROTKB|F5H5M9	1312	TNIK "TRAF2 and NCK-interactin	0.562	0.075	0.336	4.4e-10

WB|WBGene00003247 mig-15 [Caenorhabditis elegans (taxid:6239)]

 Score = 160 (61.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 34/99 (34%), Positives = 58/99 (58%)

Query:    28 DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEE 87
             DE+DL++L+D    +EL  V+G+G    VY+    +   +  +IK+  IN +  D+IK E
Sbjct:     7 DEIDLNSLRDPAGIFELIEVVGNGTYGQVYKGRHVKTA-QLAAIKIMNINEDEEDEIKLE 65

Query:    88 YRMLRDLSQHSNIPDFFGAYMKKHQT----HSEIWFVMQ 122
               ML+  S H N+  ++GA++KK  +    H ++W VM+
Sbjct:    66 INMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVME 104

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0019915 "lipid storage" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0033563 "dorsal/ventral axon guidance" evidence=IGI;IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0002119 "nematode larval development" evidence=IGI;IMP

GO:0010171 "body morphogenesis" evidence=IGI

UNIPROTKB|F5H0U9 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
 Identities = 29/91 (31%), Positives = 53/91 (58%)

Query:    33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
             DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +L+
Sbjct:    12 DNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDIDEEIEAEYNILK 70

Query:    93 DLSQHSNIPDFFGAYMKKHQTHSE-IWFVMQ 122
              LS H N+  F+G Y KK + + + +W V++
Sbjct:    71 ALSDHPNVVRFYGIYFKKDKVNGDKLWLVLE 101

GO:0003774 "motor activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

FB|FBgn0002938 ninaC "neither inactivation nor afterpotential C" [Drosophila melanogaster (taxid:7227)]

 Score = 166 (63.5 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 36/89 (40%), Positives = 53/89 (59%)

Query:    35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDL 94
             L D  D++E+   I  GV A V+ A +  N ++ V++K+Q  + E    I+EEYR LRD 
Sbjct:     9 LPDPTDKFEIYEEIAQGVNAKVFRAKELDN-DRIVALKIQHYDEEHQVSIEEEYRTLRDY 67

Query:    95 SQHSNIPDFFGAY-MKKHQTHSEIWFVMQ 122
               H N+P+F+G Y + K     EIWFVM+
Sbjct:    68 CDHPNLPEFYGVYKLSKPNGPDEIWFVME 96

GO:0007604 "phototransduction, UV" evidence=IMP

GO:0007603 "phototransduction, visible light" evidence=IMP

GO:0004672 "protein kinase activity" evidence=ISS

GO:0016461 "unconventional myosin complex" evidence=ISS;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS;IDA

GO:0016028 "rhabdomere" evidence=IDA

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0008104 "protein localization" evidence=IMP;TAS

GO:0005516 "calmodulin binding" evidence=IMP;TAS

GO:0016062 "adaptation of rhodopsin mediated signaling" evidence=IMP;TAS

GO:0016059 "deactivation of rhodopsin mediated signaling" evidence=IMP;TAS

GO:0016027 "inaD signaling complex" evidence=TAS;IPI

GO:0042385 "myosin III complex" evidence=NAS

GO:0005856 "cytoskeleton" evidence=NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0016459 "myosin complex" evidence=IEA;ISS

GO:0042623 "ATPase activity, coupled" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0033227 "dsRNA transport" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|B1ANA3 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/91 (31%), Positives = 53/91 (58%)

Query:    33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
             DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +L+
Sbjct:    12 DNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDIDEEIEAEYNILK 70

Query:    93 DLSQHSNIPDFFGAYMKKHQTHSE-IWFVMQ 122
              LS H N+  F+G Y KK + + + +W V++
Sbjct:    71 ALSDHPNVVRFYGIYFKKDKVNGDKLWLVLE 101

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RQX5 MYO3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
 Identities = 30/91 (32%), Positives = 54/91 (59%)

Query:    33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
             DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +L+
Sbjct:    12 DNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDMDEEIEAEYNILK 70

Query:    93 DLSQHSNIPDFFGAYMKKHQTHSE-IWFVMQ 122
              LS H N+  F+G Y KK +T+ + +W V++
Sbjct:    71 TLSDHPNVVRFYGMYFKKDKTNGDKLWLVLE 101

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|Q4G0X2 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 29/91 (31%), Positives = 53/91 (58%)

Query:    33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
             DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +L+
Sbjct:    12 DNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDIDEEIEAEYNILK 70

Query:    93 DLSQHSNIPDFFGAYMKKHQTHSE-IWFVMQ 122
              LS H N+  F+G Y KK + + + +W V++
Sbjct:    71 ALSDHPNVVRFYGIYFKKDKVNGDKLWLVLE 101

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|1560083 Myo3a "myosin IIIA" [Rattus norvegicus (taxid:10116)]

 Score = 153 (58.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
 Identities = 30/91 (32%), Positives = 53/91 (58%)

Query:    33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
             DN  D  D +E+   IG G    V++ L+ +NG +K ++K+     +  ++I+ EY +LR
Sbjct:    12 DNFPDPSDTWEITETIGKGTYGKVFKVLNKKNG-QKAAVKILDPIHDIDEEIEAEYNILR 70

Query:    93 DLSQHSNIPDFFGAYMKKHQTHSE-IWFVMQ 122
              LS H N+  F+G Y KK + + + +W V++
Sbjct:    71 TLSDHPNVVRFYGIYFKKDKINGDKLWLVLE 101

GO:0000146 "microfilament motor activity" evidence=ISO

GO:0001917 "photoreceptor inner segment" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005516 "calmodulin binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0007605 "sensory perception of sound" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0016459 "myosin complex" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA;ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0030175 "filopodium" evidence=ISO

GO:0030898 "actin-dependent ATPase activity" evidence=IEA;ISO

GO:0031941 "filamentous actin" evidence=IEA;ISO

GO:0032426 "stereocilium bundle tip" evidence=IEA;ISO

GO:0032433 "filopodium tip" evidence=IEA;ISO

GO:0043531 "ADP binding" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0051015 "actin filament binding" evidence=IEA;ISO

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA;ISO

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA;ISO

MGI|MGI:1355329 Mink1 "misshapen-like kinase 1 (zebrafish)" [Mus musculus (taxid:10090)]

 Score = 158 (60.7 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 35/104 (33%), Positives = 59/104 (56%)

Query:    21 PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
             P R+L  D++DL  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  + 
Sbjct:     6 PARSL--DDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDE 62

Query:    81 IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--THSEIWFVMQ 122
              ++IK+E  ML+  S H NI  ++GA++KK       ++W VM+
Sbjct:    63 EEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVME 106

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001952 "regulation of cell-matrix adhesion" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0006950 "response to stress" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0007268 "synaptic transmission" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0022407 "regulation of cell-cell adhesion" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030334 "regulation of cell migration" evidence=ISO

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0045060 "negative thymic T cell selection" evidence=IMP

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048813 "dendrite morphogenesis" evidence=ISO

GO:2000311 "regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity" evidence=ISO

UNIPROTKB|F6Q3P6 MINK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 158 (60.7 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 35/104 (33%), Positives = 59/104 (56%)

Query:    21 PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
             P R+L  D++DL  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  + 
Sbjct:     6 PARSL--DDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDE 62

Query:    81 IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--THSEIWFVMQ 122
              ++IK+E  ML+  S H NI  ++GA++KK       ++W VM+
Sbjct:    63 EEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVME 106

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0045060 "negative thymic T cell selection" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0030334 "regulation of cell migration" evidence=IEA

GO:0022407 "regulation of cell-cell adhesion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0001952 "regulation of cell-matrix adhesion" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

UNIPROTKB|F5H5M9 TNIK "TRAF2 and NCK-interacting protein kinase" [Homo sapiens (taxid:9606)]

 Score = 158 (60.7 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 35/104 (33%), Positives = 60/104 (57%)

Query:    21 PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
             P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + G +  +IKV  +  + 
Sbjct:     6 PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDE 62

Query:    81 IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT--HSEIWFVMQ 122
              ++IK+E  ML+  S H NI  ++GA++KK+      ++W VM+
Sbjct:    63 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 106

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	176
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-28
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-11
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	6e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.001

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 8e-28
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 3/90 (3%)

Query: 35  LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDL 94
           L D    +EL  VIG G    VY+A   + G + V+IK+  I  +  ++IKEEY +LR  
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTG-QLVAIKIMDIIEDEEEEIKEEYNILRKY 59

Query: 95  SQHSNIPDFFGAYMKKHQT--HSEIWFVMQ 122
           S H NI  F+GA++KK+      ++W VM+
Sbjct: 60  SNHPNIATFYGAFIKKNPPGNDDQLWLVME 89

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHS 98
           + YEL   IGSG   DVY+A D   G + V+IKV K+ P +  + I++E  ML++   H 
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATG-ELVAIKVIKLEPGDDFEIIQQEISMLKECR-HP 60

Query: 99  NIPDFFGAYMKKHQTHSEIWFVMQ 122
           NI  +FG+Y+++ +    +W VM+
Sbjct: 61  NIVAYFGSYLRRDK----LWIVME 80

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 59.2 bits (143), Expect = 6e-11
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 28  DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEE 87
           D++DL  L+D    +EL  V+G+G    VY+    + G +  +IKV  +  +  ++IK E
Sbjct: 4   DDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTEDEEEEIKLE 62

Query: 88  YRMLRDLSQHSNIPDFFGAYMKKHQT--HSEIWFVMQ 122
             ML+  S H NI  ++GA++KK       ++W VM+
Sbjct: 63  INMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVME 99

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 56.2 bits (135), Expect = 6e-10
 Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 32  LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRML 91
            D+  D  D +E+   IG G    V++ L+ +NG+K  ++K+     +  ++I+ EY +L
Sbjct: 10  FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSK-AAVKILDPIHDIDEEIEAEYNIL 68

Query: 92  RDLSQHSNIPDFFGAYMKKH-QTHSEIWFVMQ 122
           + LS H N+  F+G Y KK  +   ++W V++
Sbjct: 69  KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLE 100

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSN 99
           YE+   +G G    VY A D + G K V+IKV K     +  + I  E ++L+ L +H N
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTG-KLVAIKVIKKKKIKKDRERILREIKILKKL-KHPN 58

Query: 100 IPDFFGAYMKKHQTHSEIWFVM 121
           I   +  +    +   +++ VM
Sbjct: 59  IVRLYDVF----EDEDKLYLVM 76

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 3/90 (3%)

Query: 35  LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDL 94
           L+D    +EL  ++G+G    VY+    + G +  +IKV  +  +  ++IK+E  ML+  
Sbjct: 1   LRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDEEEEIKQEINMLKKY 59

Query: 95  SQHSNIPDFFGAYMKKHQ--THSEIWFVMQ 122
           S H NI  ++GA++KK+      ++W VM+
Sbjct: 60  SHHRNIATYYGAFIKKNPPGMDDQLWLVME 89

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 51.5 bits (123), Expect = 3e-08
 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 26  KPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIK 85
               L L++L D  D +E+   IG G    VY+  + ++G+   ++K+     +  ++I+
Sbjct: 8   NSSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSL-AAVKILDPISDVDEEIE 66

Query: 86  EEYRMLRDLSQHSNIPDFFGAYMKK-HQTHSEIWFVMQ 122
            EY +L+ L  H N+  F+G + K       ++W V++
Sbjct: 67  AEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLE 104

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKE---EYRMLRDLSQHS 98
           +E+   IG G   +VY+A   + G K+V+IK   I  E  +  ++   E ++L+    H 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTG-KEVAIK--VIKLESKEKKEKIINEIQILKKCK-HP 57

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
           NI  ++G+Y+KK     E+W VM
Sbjct: 58  NIVKYYGSYLKKD----ELWIVM 76

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 50.2 bits (121), Expect = 6e-08
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
            +  G ++G G    VY ALD   G     K S+++   + E ++ ++ E R+L  L QH
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVK-SVELSGDSEEELEALEREIRILSSL-QH 58

Query: 98  SNIPDFFGAYMKKHQTH 114
            NI  ++G+   + +  
Sbjct: 59  PNIVRYYGSERDEEKNT 75

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 29  ELDLDNLQDCGDR---YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIK 85
           +  L ++   GD    Y+    IG G   +VY+A D   G K+V+IK  ++  +  + I 
Sbjct: 5   KAALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRATG-KEVAIKKMRLRKQNKELII 63

Query: 86  EEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
            E  +++D  +H NI D++ +Y+       E+W VM
Sbjct: 64  NEILIMKD-CKHPNIVDYYDSYLVG----DELWVVM 94

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIK---VQKINPEFIDDIKEEYRMLRDLSQH 97
            Y+LG +IG G    VY+ L+ + G   V+IK   ++KI  E +  I +E  +L++L +H
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETG-DFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KH 58

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI  + G+     +T   ++ ++
Sbjct: 59  PNIVKYIGSI----ETSDSLYIIL 78

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIP 101
           +++   +G G    VY+A+  + G + V+IKV  +  + + +I +E  +L+       I 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETG-QVVAIKVVPVEED-LQEIIKEISILKQ-CDSPYIV 61

Query: 102 DFFGAYMKKHQTHSEIWFVM 121
            ++G+Y K     +++W VM
Sbjct: 62  KYYGSYFKN----TDLWIVM 77

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 7/82 (8%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNI 100
           +EL   IGSG   DVY+A +   G +  +IKV K+ P E    +++E  M++D  +HSNI
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTG-ELAAIKVIKLEPGEDFAVVQQEIIMMKD-CKHSNI 68

Query: 101 PDFFGAYMKKHQTHSEIWFVMQ 122
             +FG+Y+++     ++W  M+
Sbjct: 69  VAYFGSYLRR----DKLWICME 86

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 48  IGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG 105
           +G G    VY A D + G KKV+IK+ K       ++++  E  +L+ L  H NI   +G
Sbjct: 1   LGEGGFGTVYLARDKKTG-KKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYG 58

Query: 106 AYMKKHQTHSEIWFVM 121
            +    +  + ++ VM
Sbjct: 59  VF----EDENHLYLVM 70

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 12/86 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLS 95
           D YEL  VIG G  A VY A+   N N+KV+IK  +I+       +D++++E + +    
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPN-NEKVAIK--RIDLEKCQTSVDELRKEVQAM-SQC 56

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
            H N+  ++ +++       E+W VM
Sbjct: 57  NHPNVVKYYTSFVVGD----ELWLVM 78

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIP 101
           Y +   +G G   +VY A D +    KV  K  +   + ++    E ++L  L+   NI 
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIV 61

Query: 102 DFFGAYMKKHQTHSEIWFVMQ 122
             +  +    Q    ++ VM+
Sbjct: 62  KLYDFF----QDEGSLYLVME 78

Length = 384

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKE-----EYRMLRDLSQ 96
           YEL   +GSG    VY+A   +   K V++K   +        K+     E R+LR L  
Sbjct: 1   YELLRKLGSGSFGTVYKAKH-KGTGKIVAVK--ILKKRSEKSKKDQTARREIRILRRL-S 56

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           H NI     A+    +    ++ VM+
Sbjct: 57  HPNIVRLIDAF----EDKDHLYLVME 78

Length = 260

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 11/84 (13%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD---IKEEYRMLRDLSQHS 98
           YEL   +GSG   DVY+A +   G +  ++K+ K+ P   DD   I++E  M+++  +H 
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTG-ELAAVKIIKLEPG--DDFSLIQQEIFMVKE-CKHC 66

Query: 99  NIPDFFGAYMKKHQTHSEIWFVMQ 122
           NI  +FG+Y+ + +    +W  M+
Sbjct: 67  NIVAYFGSYLSREK----LWICME 86

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 12/87 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF----IDDIKEEYRMLRDLS 95
           + + L   IG G   +VY+A+D +  N+ V+IKV  I+ E     I+DI++E + L    
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRT-NQVVAIKV--IDLEEAEDEIEDIQQEIQFLSQC- 56

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           +   I  ++G+++K     S++W +M+
Sbjct: 57  RSPYITKYYGSFLKG----SKLWIIME 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK----------INPEFIDDIKEEYRM 90
           RYE G  +G G  A VY+A D + G + V+IK  K          IN   + +IK    +
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETG-RIVAIKKIKLGERKEAKDGINFTALREIK----L 55

Query: 91  LRDLSQHSNIPDFFGAYMKK 110
           L++L +H NI      +  K
Sbjct: 56  LQEL-KHPNIIGLLDVFGHK 74

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	176
KOG0595|consensus	429		99.94
KOG0615|consensus	475		99.93
KOG0598|consensus	357		99.9
KOG0610|consensus	459		99.9
KOG0605|consensus	550		99.9
KOG0581|consensus	364		99.89
KOG0616|consensus	355		99.88
KOG0582|consensus	516		99.88
KOG0575|consensus	592		99.87
KOG0592|consensus	604		99.87
KOG0197|consensus	468		99.86
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.86
KOG0194|consensus	474		99.86
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.86
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.86
KOG0583|consensus	370		99.85
KOG0578|consensus	550		99.85
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.85
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.85
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.85
KOG0192|consensus	362		99.85
KOG0694|consensus	694		99.85
KOG0032|consensus	382		99.84
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.84
KOG1187|consensus	361		99.84
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.84
KOG0597|consensus	808		99.84
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.84
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.84
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.83
KOG0600|consensus	560		99.83
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.83
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.83
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.83
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.83
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.83
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.82
KOG0659|consensus	318		99.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.82
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.82
KOG0593|consensus	396		99.82
KOG0198|consensus	313		99.82
KOG0580|consensus	281		99.81
KOG0585|consensus	576		99.81
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.81
KOG0588|consensus	786		99.81
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.81
KOG0663|consensus	419		99.81
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.81
KOG0587|consensus	953		99.81
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.81
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.81
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
KOG0661|consensus	538		99.81
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.81
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.81
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.81
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.8
KOG0193|consensus	678		99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.8
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.8
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.8
KOG0611|consensus	668		99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.8
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.8
KOG4250|consensus	732		99.8
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.8
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.8
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.79
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.79
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.79
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.79
KOG0594|consensus	323		99.79
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.79
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.79
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.79
KOG0201|consensus	467		99.79
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.79
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.79
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.79
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.79
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.78
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.78
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.78
PTZ00267	478	NIMA-related protein kinase; Provisional	99.78
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.78
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.78
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.78
KOG0591|consensus	375		99.78
KOG0586|consensus	596		99.78
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.78
PHA03212	391	serine/threonine kinase US3; Provisional	99.78
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.78
KOG0589|consensus	426		99.78
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.78
KOG0667|consensus	586		99.78
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.78
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.78
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.78
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.78
KOG0612|consensus	1317		99.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.78
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.77
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.77
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.77
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.77
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.77
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.77
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.77
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.77
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.77
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.77
KOG0658|consensus	364		99.77
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.77
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.77
KOG4279|consensus	1226		99.77
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.77
KOG4717|consensus	864		99.77
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.77
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.77
KOG0574|consensus	502		99.76
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.76
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.76
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.76
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.76
KOG1989|consensus	738		99.76
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.76
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.76
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.76
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.76
KOG4236|consensus	888		99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.76
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.76
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.76
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.76
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.76
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.76
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.76
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.76
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.75
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.75
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.75
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.75
KOG1290|consensus	590		99.75
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.75
PTZ00283	496	serine/threonine protein kinase; Provisional	99.75
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.75
KOG2052|consensus	513		99.75
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.75
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.75
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.75
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.75
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.75
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.75
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.75
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.75
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.75
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.75
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.75
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.75
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.75
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.74
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.74
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.74
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.74
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.74
PTZ00036	440	glycogen synthase kinase; Provisional	99.74
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.74
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.74
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.74
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.74
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.74
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.74
KOG1094|consensus	807		99.74
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.74
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.74
KOG0660|consensus	359		99.74
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.74
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.74
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.74
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.74
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.74
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.74
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.73
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.73
PTZ00284	467	protein kinase; Provisional	99.73
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.73
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.73
PRK09188	365	serine/threonine protein kinase; Provisional	99.73
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.73
KOG1026|consensus	774		99.73
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.73
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.73
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.73
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.73
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.73
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.73
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.73
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.73
KOG0607|consensus	463		99.73
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.73
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.73
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.72
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.72
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.72
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.72
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.72
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.72
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.72
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.72
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.72
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.72
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.72
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.72
KOG0577|consensus	948		99.72
KOG4278|consensus	1157		99.72
KOG0576|consensus	829		99.72
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.72
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.72
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.72
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.72
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.72
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.72
PHA03209	357	serine/threonine kinase US3; Provisional	99.72
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.72
KOG0199|consensus	1039		99.72
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.72
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.72
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.72
KOG1152|consensus	772		99.72
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.71
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.71
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.71
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.71
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.71
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.71
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.71
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.71
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.71
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.71
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.71
KOG4257|consensus	974		99.71
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.71
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.71
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.71
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.71
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.71
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.71
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.7
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.7
KOG1095|consensus	1025		99.7
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.7
PHA03211	461	serine/threonine kinase US3; Provisional	99.7
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.7
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.7
KOG0599|consensus	411		99.7
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.7
KOG1025|consensus	1177		99.7
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.7
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.7
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.7
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.7
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.7
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.7
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.7
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.7
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.7
KOG0579|consensus	1187		99.7
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.7
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.7
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.7
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.7
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.7
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.69
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.69
KOG0033|consensus	355		99.69
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.69
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.69
PHA03207	392	serine/threonine kinase US3; Provisional	99.69
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.69
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.69
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.69
PHA02988	283	hypothetical protein; Provisional	99.69
KOG0690|consensus	516		99.69
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.69
KOG0662|consensus	292		99.69
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.68
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.68
KOG0196|consensus	996		99.68
KOG3653|consensus	534		99.68
PLN00009	294	cyclin-dependent kinase A; Provisional	99.68
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.68
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.68
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.68
KOG0608|consensus	1034		99.68
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.68
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.68
PRK10345	210	hypothetical protein; Provisional	99.68
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.68
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.68
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.68
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.68
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.68
KOG0604|consensus	400		99.67
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.67
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.67
KOG4721|consensus	904		99.67
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.67
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.67
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.67
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.67
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.67
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.67
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.67
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.67
PHA03210	501	serine/threonine kinase US3; Provisional	99.67
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.67
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.66
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.66
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.66
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.66
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.66
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.66
KOG0668|consensus	338		99.65
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.65
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.65
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.65
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.65
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.65
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.65
KOG2345|consensus	302		99.65
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.65
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.65
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.64
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.64
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.64
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.64
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.64
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.63
KOG1167|consensus	418		99.63
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.63
KOG0695|consensus	593		99.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.63
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.63
KOG4645|consensus	1509		99.63
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.63
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.63
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.63
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.62
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.62
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.61
KOG0671|consensus	415		99.61
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.61
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.6
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.6
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.59
KOG0584|consensus	632		99.59
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.59
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.59
KOG0696|consensus	683		99.59
KOG1035|consensus	1351		99.59
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.58
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.57
KOG0614|consensus	732		99.57
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.57
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.56
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.55
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.54
KOG0986|consensus	591		99.53
KOG1345|consensus	378		99.53
KOG0200|consensus	609		99.53
KOG1163|consensus	341		99.52
KOG0666|consensus	438		99.51
KOG0596|consensus	677		99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.51
KOG0603|consensus	612		99.51
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.5
KOG1151|consensus	775		99.49
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.48
PHA02882	294	putative serine/threonine kinase; Provisional	99.47
smart00090	237	RIO RIO-like kinase.	99.46
PRK14879	211	serine/threonine protein kinase; Provisional	99.46
KOG0669|consensus	376		99.44
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.44
KOG1165|consensus	449		99.43
KOG1164|consensus	322		99.4
KOG0664|consensus	449		99.4
KOG1027|consensus	903		99.4
PRK12274	218	serine/threonine protein kinase; Provisional	99.4
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.39
KOG1006|consensus	361		99.35
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.35
KOG0670|consensus	752		99.34
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.32
KOG0984|consensus	282		99.28
KOG0983|consensus	391		99.2
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.18
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.17
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.12
KOG1166|consensus	974		99.07
KOG0665|consensus	369		99.06
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.04
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.99
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.89
KOG1024|consensus	563		98.84
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.77
KOG0590|consensus	601		98.31
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.13
KOG0603|consensus	612		98.11
PLN00181	793	protein SPA1-RELATED; Provisional	98.09
KOG0590|consensus	601		97.96
KOG0601|consensus	524		97.87
KOG0195|consensus	448		97.83
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.82
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.8
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.78
KOG1240|consensus	1431		97.74
KOG4158|consensus	598		97.72
KOG3087|consensus	229		97.67
KOG0606|consensus	1205		97.63
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.61
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.4
KOG1243|consensus	690		97.27
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.22
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.13
KOG1235|consensus	538		97.01
KOG3741|consensus	655		96.95
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.93
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.88
KOG0601|consensus	524		96.79
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.71
KOG1023|consensus	484		96.34
PLN02876	822	acyl-CoA dehydrogenase	96.13
PF01636	239	APH: Phosphotransferase enzyme family This family	95.7
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.66
PRK09902	216	hypothetical protein; Provisional	95.52
PRK10593	297	hypothetical protein; Provisional	95.32
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.76
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.75
KOG1266|consensus	458		93.92
PRK09550	401	mtnK methylthioribose kinase; Reviewed	91.82
KOG0606|consensus	1205		91.56
KOG1033|consensus	516		90.26
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	90.01
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	89.64
KOG2270|consensus	520		88.53
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	88.11
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	86.56
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	85.51
KOG1033|consensus	516		84.54
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	83.75
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	82.12
KOG0576|consensus	829		82.12

>KOG0595|consensus

Probab=99.94  E-value=2.4e-26  Score=176.26  Aligned_cols=127  Identities=21%  Similarity=0.308  Sum_probs=110.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ...|.+.+.||+|+|+.||+|.++. .+..+|||.+...   ++..+....|+++++.+ +|+|||.++++..+    ++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~-~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~----~~   82 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKK-SGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIED----DD   82 (429)
T ss_pred             cccceehhhccCcceEEEEEeEecc-CCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEec----CC
Confidence            3569999999999999999999988 8899999999864   34566789999999999 99999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|||||||.||+|.++|+ .+..+....+..  |..-+|++||.++|   |||||||+|+.
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~I---iHRDLKPQNiL  141 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNI---IHRDLKPQNIL  141 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCCcceEE
Confidence            9999999999999999998 445555443333  66778999999999   99999999984

>KOG0615|consensus

Probab=99.93  E-value=1.7e-25  Score=171.82  Aligned_cols=131  Identities=19%  Similarity=0.242  Sum_probs=111.3

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--------hHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--------FIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--------~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      ...+.+.|.+.+.||+|+||.|.++..+. ++..||+|++.....        ....+.+|+.+|+.+ .|||||+++++
T Consensus       167 pks~~d~yii~~~LGsGafg~Vkla~e~~-tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~  244 (475)
T KOG0615|consen  167 PKSFNDYYIISKTLGSGAFGLVKLAYEKK-TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDF  244 (475)
T ss_pred             cchhcceeEeeeeecCCceeEEEEEEEcc-cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeee
Confidence            34567788999999999999999999998 999999999986421        122367999999999 99999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcC-CC--CCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALK-PD--ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~--~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |..    ....|+||||++||+|++++- ..  ..+.....+.|.+-++.|||..||   +||||||+||.
T Consensus       245 f~~----~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI---~HRDiKPeNIL  308 (475)
T KOG0615|consen  245 FEV----PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGI---IHRDIKPENIL  308 (475)
T ss_pred             eec----CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCc---ccccCCcceEE
Confidence            999    788899999999999999987 22  333334556688999999999999   99999999984

>KOG0598|consensus

Probab=99.90  E-value=1.1e-23  Score=159.94  Aligned_cols=127  Identities=20%  Similarity=0.327  Sum_probs=111.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+++.||+|+||+|+++.... ++..+|+|++++.    .........|..++..+ +||.||+++..|.+    .
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~d-t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt----~   97 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKD-TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQT----E   97 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcc-cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEeccc----C
Confidence            4579999999999999999999987 9999999999874    23567789999999998 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChh--hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLD--NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~--~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+|+||+.||.|+--|+ +....++  ..+.+++..||.|||.+||   ||||+||+|+.
T Consensus        98 ~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gI---iyRDlKPENIL  157 (357)
T KOG0598|consen   98 EKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGI---IYRDLKPENIL  157 (357)
T ss_pred             CeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCe---eeccCCHHHee
Confidence            99999999999999999998 4444444  4445588999999999999   99999999984

>KOG0610|consensus

Probab=99.90  E-value=6.6e-24  Score=163.19  Aligned_cols=125  Identities=18%  Similarity=0.207  Sum_probs=108.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++++.||+|.-|.||++.... ++..+|+|++....    +....+..|-.++..+ +||.++.++..|.+    ...
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~-t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet----~~~  151 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRG-TNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFET----DKY  151 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecC-CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeec----cce
Confidence            67888999999999999999988 78999999998753    3456788899999999 99999999999999    899


Q ss_pred             EEEEEecCCCCChhhhcCC---CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP---DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .|++||||+||+|..+.+.   .....+..++.  +++.+|+|||..||   |||||||+||.
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi---vYRDLKPENIL  211 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI---VYRDLKPENIL  211 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce---eeccCCcceeE
Confidence            9999999999999999872   23334444444  88999999999999   99999999995

>KOG0605|consensus

Probab=99.90  E-value=3.1e-23  Score=163.75  Aligned_cols=128  Identities=16%  Similarity=0.216  Sum_probs=112.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      -.+.|.+++.||+|+||.||.|.-+. +|..+|+|.+++..    .....+..|-.+|... ++++||+++..|.+    
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~-Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD----  212 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKD-TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQD----  212 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEcc-CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecC----
Confidence            34579999999999999999999998 99999999998763    3566789999999996 99999999999999    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||||++||++..+|. .+.+..+.+++.  +...++..+|..|+   |||||||+|..
T Consensus       213 ~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gy---IHRDIKPdNlL  273 (550)
T KOG0605|consen  213 KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGY---IHRDIKPDNLL  273 (550)
T ss_pred             CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCc---ccccCChhhee
Confidence            899999999999999999987 555555555555  67789999999999   99999999974

>KOG0581|consensus

Probab=99.89  E-value=9.9e-23  Score=154.80  Aligned_cols=125  Identities=23%  Similarity=0.281  Sum_probs=107.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec--ChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc-eE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI--NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS-EI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~--~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~-~~  117 (176)
                      .+..+..||+|+.|.|+++.++. ++..+|+|.+..  .+...+++.+|+.+++.+ +||+||.++++|..    .. .+
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~-t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~----~~~~i  153 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKP-TGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYS----NGEEI  153 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcC-CCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEe----CCceE
Confidence            57778999999999999999998 899999999954  455778899999999998 99999999999988    56 59


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||++|+|.+++. .+...++.+  ...+++.+|.|||. .+|   ||||+||+|+.
T Consensus       154 sI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I---IHRDIKPsNlL  211 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKI---IHRDIKPSNLL  211 (364)
T ss_pred             EeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCe---eeccCCHHHee
Confidence            99999999999999997 344444333  33377889999995 888   99999999984

>KOG0616|consensus

Probab=99.88  E-value=1e-22  Score=151.03  Aligned_cols=126  Identities=16%  Similarity=0.275  Sum_probs=110.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|..++.||.|+||.|+.+..+. ++..+|+|.+....    +..+...+|..+++.+ .||.++.+.+.+.+    ..
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~-~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d----~~  117 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKH-SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKD----NS  117 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEcc-CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeecc----CC
Confidence            358889999999999999999998 88999999998753    3566789999999998 89999999999998    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||++||.|+.+++ ....+++..++.  ++..+|+|+|+++|   +|||+||+|+.
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~i---iYRDLKPENiL  176 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDI---IYRDLKPENLL  176 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCe---eeccCChHHee
Confidence            9999999999999999998 455555555555  78889999999999   99999999974

>KOG0582|consensus

Probab=99.88  E-value=1.2e-21  Score=152.18  Aligned_cols=135  Identities=25%  Similarity=0.346  Sum_probs=116.9

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      .-..++.....|++.++||.|..+.||++.... .++.||||+++.+.  .+...+..|+..|..+ +||||++++..|.
T Consensus        17 ~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p-~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   17 SEKEFPLNAKDYELQEVIGVGASAVVYLARCIP-TNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFV   94 (516)
T ss_pred             ccccCCCCccceeEEEEEeccceeEeeeeeecc-cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEE
Confidence            344566777889999999999999999999998 88999999998764  3578899999999998 9999999999999


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC---CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK---PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    +..+|+||+||.+|++.++++   +...++...  ...+.+.+|.|+|.+|.   ||||+|++||.
T Consensus        95 v----~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~---IHRdvKAgnIL  158 (516)
T KOG0582|consen   95 V----DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGH---IHRDVKAGNIL  158 (516)
T ss_pred             e----cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCc---eecccccccEE
Confidence            9    899999999999999999998   445554332  23377889999999999   99999999984

>KOG0575|consensus

Probab=99.87  E-value=9.6e-22  Score=157.28  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=111.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+|...+.||+|+|..||.+.+.. +++.||+|+++..    ....+.+.+|+.+++.+ +|||||++++.|++    .+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~-tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FED----s~   91 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLD-TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFED----SN   91 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcC-CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeec----CC
Confidence            579999999999999999999987 8999999999873    34567799999999999 99999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||+.|+|..|+|..+++ .....++..+..  |+.-+|.|||+.+|   ||||||=+|+-
T Consensus        92 nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~I---iHRDLKLGNlf  150 (592)
T KOG0575|consen   92 NVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGI---IHRDLKLGNLF  150 (592)
T ss_pred             ceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCc---eecccchhhee
Confidence            9999999999999999998 445555444333  88889999999999   99999999963

>KOG0592|consensus

Probab=99.87  E-value=2e-22  Score=159.51  Aligned_cols=128  Identities=19%  Similarity=0.294  Sum_probs=111.7

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..+|..++.||+|+|++|++|.... ++..+|+|++.+.    ....+.+..|-.+|..|.+||.|++++..|.+    .
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~-t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD----~  146 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKA-TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD----E  146 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecC-CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec----c
Confidence            3469999999999999999999998 8999999998764    23345577788888888899999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+|+||+++|+|.++|+ -+..+..+.++.  +++-+|+|+|++||   |||||||+||.
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GI---IHRDlKPENIL  206 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGI---IHRDLKPENIL  206 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCc---eeccCChhhee
Confidence            99999999999999999998 566676666555  77889999999999   99999999984

>KOG0197|consensus

Probab=99.86  E-value=2.9e-22  Score=158.07  Aligned_cols=133  Identities=19%  Similarity=0.246  Sum_probs=114.7

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .+.|....+.+++++.||+|.||.||.|.+..  ...+|+|.+.........|.+|+.+|+.| .|++||++++++..  
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~--~~~vavk~ik~~~m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~--  272 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG--STKVAVKTIKEGSMSPEAFLREAQIMKKL-RHEKLVKLYGVCTK--  272 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcC--CCcccceEEeccccChhHHHHHHHHHHhC-cccCeEEEEEEEec--
Confidence            56677777889999999999999999999965  45799999988766778899999999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC---CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +.++||||||++.|+|.+||+.   .....+.+...  ++.-+|+||.++++   |||||+..||.
T Consensus       273 --~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~---IHRDLAARNiL  335 (468)
T KOG0197|consen  273 --QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNY---IHRDLAARNIL  335 (468)
T ss_pred             --CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCc---cchhhhhhhee
Confidence              7789999999999999999983   33444433222  77888999999999   99999999985

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=5.6e-21  Score=150.93  Aligned_cols=125  Identities=14%  Similarity=0.153  Sum_probs=105.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+..    ...
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~----~~~   75 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKD-TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQD----AQY   75 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEc----CCe
Confidence            58999999999999999999987 88899999986532    2355688899999998 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ..........  ..+.+.+|+|+|..|+   +||||||+||.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi---vHrDlkp~NIl  133 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGF---IHRDIKPDNIL  133 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEE
Confidence            999999999999999986 2333333332  3377889999999998   99999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0194|consensus

Probab=99.86  E-value=3.5e-21  Score=153.45  Aligned_cols=137  Identities=22%  Similarity=0.320  Sum_probs=112.0

Q ss_pred             cccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeec----ChhhHHHHHHHHHHHHhccCCCCc
Q psy9091          29 ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKI----NPEFIDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~----~~~~~~~~~~e~~~~~~l~~h~ni  100 (176)
                      .+.-+.|.-..++..+.+.||+|+||.||.|.... .+    ..||+|....    ..+...+++.|+++|+.+ +|+||
T Consensus       146 PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~-~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NV  223 (474)
T KOG0194|consen  146 PIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKL-KNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNV  223 (474)
T ss_pred             cccccccEEeccCccccceeecccccEEEEEEEEe-cCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCE
Confidence            34566677777778888999999999999998865 32    2389998874    245678899999999999 99999


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCC--CChhh-Hhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE--LDLDN-LQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~-~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|....    .+++++|||+|.||+|.++|+...  ..... ..++ +..-+|+|||.+++   |||||+.+|..
T Consensus       224 Vr~yGVa~~----~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~---IHRDIAARNcL  294 (474)
T KOG0194|consen  224 VRFYGVAVL----EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC---IHRDIAARNCL  294 (474)
T ss_pred             EEEEEEEcC----CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC---cchhHhHHHhe
Confidence            999999999    899999999999999999998433  33322 2333 66778999999999   99999999963

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.86  E-value=7.6e-21  Score=150.43  Aligned_cols=125  Identities=12%  Similarity=0.137  Sum_probs=105.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|..++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|+.++..+ +|+||+++++.+.+    .+.
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~----~~~   75 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVD-THALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQD----KDN   75 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEec----CCE
Confidence            58999999999999999999988 88899999997632    2455688999999998 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++. ....+.....  ..+.+.+|+|+|..|+   +||||||+||.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~gi---vHrDlKp~Nil  133 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGF---IHRDIKPDNIL  133 (381)
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCcHHHEE
Confidence            999999999999999986 3333333322  3377788999999998   99999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.86  E-value=9.5e-21  Score=148.97  Aligned_cols=125  Identities=15%  Similarity=0.199  Sum_probs=105.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||+|+||.||.+.+.. ++..+|+|.++...    .....+..|+.++..+ +|+||+++++.+..    ...
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~----~~~   75 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKD-TGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQD----KLN   75 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEec----CCe
Confidence            58999999999999999999987 78899999997532    2345678899999998 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ...........  .+++.+|+|+|..|+   +||||||+||-
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi---vHrDlKp~NIL  133 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF---IHRDIKPDNLL  133 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EecCCCHHHeE
Confidence            999999999999999986 33444433322  377789999999998   99999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0583|consensus

Probab=99.85  E-value=4e-21  Score=151.06  Aligned_cols=130  Identities=24%  Similarity=0.269  Sum_probs=108.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-----h-hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-----P-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-----~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      .....|.+.+.||+|+||.|+.+.+.. ++..+|+|.++..     . ...+.+.+|+.+++.+..||||++++.++.+ 
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~-t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-   91 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRL-TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-   91 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeecc-CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec-
Confidence            345679999999999999999999988 8899999977653     1 2344677899999999339999999999999 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC-CCCCh--hhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP-DELDL--DNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~--~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ...+++||||+.||+|+++|.. ....+  ....+.|..-+++|+|++||   +||||||+|+.
T Consensus        92 ---~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi---~HRDLK~ENil  152 (370)
T KOG0583|consen   92 ---PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGI---VHRDLKPENIL  152 (370)
T ss_pred             ---CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCE---eeCCCCHHHEE
Confidence               6779999999999999999973 33333  23355588889999999999   99999999974

>KOG0578|consensus

Probab=99.85  E-value=1.1e-21  Score=155.77  Aligned_cols=132  Identities=21%  Similarity=0.335  Sum_probs=114.3

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...++...|...+++|+|+.|.||.+.... ++..||+|.+..... ..+-+.+|+.+|+.. +|+|||++++.|..   
T Consensus       267 ~~~dP~~~y~~~~kigqgaSG~vy~A~~~~-~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv---  341 (550)
T KOG0578|consen  267 SQGDPRSKYTDFKKIGQGATGGVYVARKIS-TKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLV---  341 (550)
T ss_pred             cCCChhhhhcchhhhccccccceeeeeecc-CCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcc---
Confidence            346777889999999999999999999988 888999999987543 455689999999998 99999999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCC-hhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELD-LDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|+||||++||+|.|.+.....+ .+.+..| +.+.+|+|||.+||   +|||||+|||.
T Consensus       342 -~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gI---iHrDIKSDnIL  401 (550)
T KOG0578|consen  342 -GDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGI---IHRDIKSDNIL  401 (550)
T ss_pred             -cceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcce---eeeccccceeE
Confidence             79999999999999999999854343 3334455 77899999999999   99999999985

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.85  E-value=1.2e-20  Score=149.22  Aligned_cols=125  Identities=13%  Similarity=0.139  Sum_probs=105.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|..++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|+.+++.+ +|+||+++++.+..    ...
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~----~~~   75 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVD-TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQD----KDN   75 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECC-CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEe----CCE
Confidence            58999999999999999999987 78899999987532    2355688999999998 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ..........  ..+++.+|+|+|..++   +||||||+||.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~i---vHrDlKp~NIL  133 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGF---IHRDIKPDNIL  133 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            999999999999999986 3333333332  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=9.8e-21  Score=148.74  Aligned_cols=125  Identities=12%  Similarity=0.177  Sum_probs=105.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|+.++..+ +|+||+++++.+..    .+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~----~~~   75 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKD-TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQD----ENY   75 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEc----CCe
Confidence            58999999999999999999987 78899999997532    2345678899999999 99999999999998    889


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. .........  ...+.+.+|+|+|..|+   +|+||||+||-
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i---vH~Dlkp~NIl  133 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY---IHRDIKPDNLL  133 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeE
Confidence            999999999999999986 333333332  23377889999999998   99999999984

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.85  E-value=1.3e-20  Score=148.82  Aligned_cols=125  Identities=14%  Similarity=0.145  Sum_probs=105.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++++.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+..    .+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~----~~~   75 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVD-TNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQD----KDN   75 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECC-CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEc----CCE
Confidence            59999999999999999999987 78899999987532    2345678899999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ..........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~Nil  133 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGF---IHRDIKPDNIL  133 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHEE
Confidence            999999999999999986 3333333322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0192|consensus

Probab=99.85  E-value=4.7e-21  Score=149.80  Aligned_cols=125  Identities=22%  Similarity=0.274  Sum_probs=101.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeE-EEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKK-VSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~-~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.+...+.+|+|+||+||.+.+..   .. +|+|.+....   .....|..|+.++..+ +||||+.++|++..    ..
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g---~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~----~~  112 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRG---TDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTS----PP  112 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCC---ceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcC----CC
Confidence            345666779999999999999954   44 9999988642   2366899999999999 99999999999987    44


Q ss_pred             -eEEEEEecCCCCChhhhcCC---CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 -EIWFVMQREAEMPPPRALKP---DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 -~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+++||||+++|+|.+++..   ..++...+...  ++..+|.|+|..+.  +|||||||+||.
T Consensus       113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiL  175 (362)
T KOG0192|consen  113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNIL  175 (362)
T ss_pred             CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEE
Confidence             69999999999999999953   44555443222  66778999999993  399999999985

>KOG0694|consensus

Probab=99.85  E-value=9.9e-21  Score=153.31  Aligned_cols=127  Identities=20%  Similarity=0.287  Sum_probs=112.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.++++||+|+||+|+++..+. +++.+|||.+++.    .+.....+.|-.++....+||.+++++++|.+    ..
T Consensus       368 ~~F~~l~vLGkGsFGkV~lae~k~-~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT----~~  442 (694)
T KOG0694|consen  368 DDFRLLAVLGRGSFGKVLLAELKG-TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT----KE  442 (694)
T ss_pred             cceEEEEEeccCcCceEEEEEEcC-CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc----CC
Confidence            579999999999999999999998 8899999999875    35677889999999988789999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|+||||+.||++...++....++...++.  .+..+|.|+|.+||   ||||||-|||.
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~I---IYRDlKLdNiL  500 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGI---IYRDLKLDNLL  500 (694)
T ss_pred             eEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCc---eeeecchhheE
Confidence            9999999999999766666677777666555  67789999999999   99999999984

>KOG0032|consensus

Probab=99.84  E-value=1.6e-20  Score=147.83  Aligned_cols=132  Identities=24%  Similarity=0.281  Sum_probs=111.1

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      .......|.+.+.||+|.||.||.|.... ++..+|+|.+....    .....+.+|+.+|..+.+|||++.+++.|.+ 
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~-tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-  107 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKS-TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-  107 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecC-CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-
Confidence            45667789999999999999999999998 89999999998753    2456899999999999559999999999999 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCCCCCh-hh-HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPDELDL-DN-LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~-~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ...+++|||++.||+|++.|....... .. ....+++.+++|+|..|+   ||||+||+|+.
T Consensus       108 ---~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gv---vHrDlKpEN~L  167 (382)
T KOG0032|consen  108 ---PDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGV---VHRDLKPENLL  167 (382)
T ss_pred             ---CCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCc---eeccCCHHHee
Confidence               789999999999999999997431222 11 122367778999999888   99999999974

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.84  E-value=3.9e-20  Score=143.68  Aligned_cols=126  Identities=17%  Similarity=0.289  Sum_probs=106.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||+|.+.. .+..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+..    .+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~   91 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKG-TGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQD----EN   91 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEc----CC
Confidence            569999999999999999999987 78899999987532    2345688999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++. .........  ...+...+|+|+|..++   +|+||||+||.
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~NIl  150 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDI---IYRDLKPENLL  150 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHEE
Confidence            9999999999999999986 333333322  22377788999999998   99999999984

>KOG1187|consensus

Probab=99.84  E-value=7.8e-21  Score=149.02  Aligned_cols=138  Identities=17%  Similarity=0.259  Sum_probs=110.8

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhh-HHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF-IDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~-~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +++..+....++|.....||+|+||.||+|....  +..+|||.+...... ..+|.+|+.++..+ +|+|+++++|+|.
T Consensus        65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~--~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~  141 (361)
T KOG1187|consen   65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD--GTVVAVKRLSSNSGQGEREFLNEVEILSRL-RHPNLVKLLGYCL  141 (361)
T ss_pred             eeHHHHHHHHhCCchhcceecCCCeEEEEEEECC--CCEEEEEEecCCCCcchhHHHHHHHHHhcC-CCcCcccEEEEEe
Confidence            4555566666788888999999999999999865  478999987765433 45699999999999 8999999999999


Q ss_pred             eccCCcc-eEEEEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHS-EIWFVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+ +.+||+||+++|+|.+.|...   .++=..+  ...+...+|+|||...-..+||||+|++||.
T Consensus       142 e----~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNIL  209 (361)
T KOG1187|consen  142 E----GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNIL  209 (361)
T ss_pred             c----CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHee
Confidence            8    66 599999999999999999732   2222111  1226667799999888778899999999984

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.84  E-value=3.3e-20  Score=146.41  Aligned_cols=130  Identities=14%  Similarity=0.115  Sum_probs=107.6

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....+.|++.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|+.++..+ +||||+++++.+..  
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~--  114 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKS-SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQD--  114 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEc--
Confidence            3344679999999999999999999987 78899999987531    2344577899999998 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+|+||||+++|+|.+++.....+....  ...+.+.+|+|+|..++   +||||||+||.
T Consensus       115 --~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~I---vHrDLKp~NIL  174 (370)
T cd05621         115 --DKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL---IHRDVKPDNML  174 (370)
T ss_pred             --CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEE
Confidence              789999999999999999997433443333  22377788999999998   99999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0597|consensus

Probab=99.84  E-value=4.2e-21  Score=153.08  Aligned_cols=125  Identities=20%  Similarity=0.357  Sum_probs=107.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|.+.+.||+|+||.||+|..+. +...||+|.+.+.   .+....+.+|+.+++.+ +||||+.++++|++    ..+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~-t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt----~~~   75 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY-TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFET----SAH   75 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc-ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcc----cce
Confidence            358888999999999999999887 8889999999874   34677899999999999 99999999999999    799


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+|+||+.| +|+.+|. ...+.+...+..  +...+|.|+|+.+|   +|||+||+||.
T Consensus        76 ~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~ri---lhrd~kPqniL  132 (808)
T KOG0597|consen   76 LWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRI---LHRDMKPQNIL  132 (808)
T ss_pred             EEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCc---ccccCCcceee
Confidence            9999999986 9999997 445555444333  44567999999999   99999999984

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=2.5e-20  Score=142.37  Aligned_cols=125  Identities=18%  Similarity=0.206  Sum_probs=105.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +|++.+.||+|+||.||++.+.. .+..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+..    .+.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~~   75 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRI-SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHD----QRF   75 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcC-CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhcc----CCe
Confidence            58999999999999999999987 78899999987532    2345688899999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++. .........  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~NIl  133 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEI---VYRDLKPENIL  133 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeE
Confidence            999999999999999986 333333332  22377788999999998   99999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=6.1e-20  Score=142.68  Aligned_cols=125  Identities=14%  Similarity=0.134  Sum_probs=105.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||+|+||.||+|.+.. ++..+|+|.+....    .....+..|+.++..+ +|+||+++++.+..    .+.
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~----~~~   75 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKD-TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQD----DEY   75 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEc----CCE
Confidence            58999999999999999999987 78899999987532    2345688899999998 89999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .|++|||+++|+|.+++. ..........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  133 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGY---IHRDLKPENFL  133 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            999999999999999996 3333333322  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.83  E-value=7.2e-20  Score=143.79  Aligned_cols=125  Identities=15%  Similarity=0.207  Sum_probs=105.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|+..+.||+|+||.||.+.+.. ++..+|+|.++..    ......+..|+.++..+ +|+|++++++.+..    ...
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~----~~~   75 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKD-TGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQD----KRN   75 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEc----CCE
Confidence            58999999999999999999987 7889999998753    22355678899999998 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ..........  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~gi---vHrDLkp~NIl  133 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGF---IHRDIKPDNLL  133 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EccCCCHHHEE
Confidence            999999999999999986 3334433332  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0600|consensus

Probab=99.83  E-value=1e-20  Score=148.73  Aligned_cols=131  Identities=22%  Similarity=0.256  Sum_probs=108.1

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +...+.|..+++||+|+||.||++.+.. ++..||+|.++...   .......+|+.+++.+ +||||+++.+....+. 
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~-tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~-  189 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLE-TGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKL-  189 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecc-cCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecC-
Confidence            5556689999999999999999999998 89999999998753   3566789999999999 9999999999988732 


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|||+|||++ +|..++...  ....+..  ++.|.+.+|.|+|.+|+   +|||||.+|+.
T Consensus       190 -~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv---lHRDIK~SNiL  250 (560)
T KOG0600|consen  190 -SGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV---LHRDIKGSNIL  250 (560)
T ss_pred             -CceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe---eeccccccceE
Confidence             3689999999985 777777632  2223222  34488889999999999   99999999974

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.83  E-value=7.5e-20  Score=144.36  Aligned_cols=130  Identities=12%  Similarity=0.095  Sum_probs=107.2

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|+.+++.+ +|+||+.+++.+..  
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~--  114 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKS-SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQD--  114 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEec--
Confidence            3345679999999999999999999987 78899999987532    2334577899999998 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+|+||||+++|+|.+++...........  ..+...+|+|+|..|+   +|+||||+||.
T Consensus       115 --~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NIL  174 (370)
T cd05596         115 --DKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGF---IHRDVKPDNML  174 (370)
T ss_pred             --CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEE
Confidence              7899999999999999999864333333322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.83  E-value=4e-20  Score=143.89  Aligned_cols=97  Identities=22%  Similarity=0.277  Sum_probs=78.6

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      |+.+.++|.+.+.||+|+||.||+|.+..    ..+..+|+|.+...  ......+..|+.++..+.+|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            45566789999999999999999997521    03457999998753  2345678999999999878999999999886


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      ..   ...++++|||+++|+|.+++.
T Consensus        82 ~~---~~~~~lv~ey~~~g~L~~~l~  104 (338)
T cd05102          82 KP---NGPLMVIVEFCKYGNLSNFLR  104 (338)
T ss_pred             CC---CCceEEEEecCCCCcHHHHHH
Confidence            53   456899999999999999885

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.3e-19  Score=140.98  Aligned_cols=126  Identities=19%  Similarity=0.167  Sum_probs=104.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|++.+.||+|+||.||++.... .+..+|+|.+....    .....+..|..++..+ +|+||+.+++.+..    .+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~   74 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKN-TGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQD----EN   74 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEec----CC
Confidence            358999999999999999999987 78899999987532    2345578899999988 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++..  .........  ..+++.+|+|+|..++   +|+||||+||.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  134 (331)
T cd05597          75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY---VHRDIKPDNVL  134 (331)
T ss_pred             eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EECCCCHHHEE
Confidence            99999999999999999862  233333322  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.83  E-value=1.1e-19  Score=142.01  Aligned_cols=128  Identities=16%  Similarity=0.211  Sum_probs=105.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCC-eEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGN-KKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..+.|.+.+.||+|+||.||++.+.. .+ ..+|+|.+...    ......+.+|+.++..+ +||||+++++.+..   
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~---  102 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKN-EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKD---  102 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEEC-CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEe---
Confidence            34569999999999999999998765 44 68999988653    23455678899999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.++++|||+++|+|.+++. .........  ...+.+.+|.|+|..|+   +|+||||+||-
T Consensus       103 -~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NIL  163 (340)
T PTZ00426        103 -ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI---VYRDLKPENLL  163 (340)
T ss_pred             -CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EccCCCHHHEE
Confidence             789999999999999999996 333443332  23377788999999998   99999999984

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.83  E-value=1.1e-19  Score=143.42  Aligned_cols=130  Identities=14%  Similarity=0.107  Sum_probs=107.3

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....+.|++.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..+++.+ +||||+++++.+..  
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~--  114 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKS-TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQD--  114 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECC-CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEc--
Confidence            3444689999999999999999999987 88899999987532    2344577889999998 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+++||||+++|+|.+++...........  ..+.+.+|+|+|..++   +|+||||+||-
T Consensus       115 --~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NIl  174 (371)
T cd05622         115 --DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---IHRDVKPDNML  174 (371)
T ss_pred             --CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCE---EeCCCCHHHEE
Confidence              7899999999999999999874334433322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.82  E-value=1.8e-19  Score=140.04  Aligned_cols=126  Identities=17%  Similarity=0.129  Sum_probs=104.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|.+.+.||+|+||.||++.+.. .+..+|+|.+....    .....+..|..++..+ .|+||+.+++.+..    .+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~----~~   74 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKH-TERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQD----EN   74 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEc----CC
Confidence            369999999999999999999987 78899999987532    2344577888888888 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..|+||||+++|+|.+++..  .........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        75 ~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i---iHrDlkp~Nil  134 (331)
T cd05624          75 YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY---VHRDIKPDNVL  134 (331)
T ss_pred             EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCchHHEE
Confidence            99999999999999999863  333333322  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.1e-19  Score=142.00  Aligned_cols=125  Identities=18%  Similarity=0.240  Sum_probs=105.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +|.+.+.||+|+||.||++.+.. .+..+|+|.+....    .....+..|+.++..+ .|+|++++++.+..    .+.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~   75 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKD-TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQD----EEH   75 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECC-CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheec----CCe
Confidence            59999999999999999999987 78899999987532    3455688899999998 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++. ..........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---iH~Dlkp~NIl  133 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGF---IHRDIKPDNIL  133 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeE
Confidence            999999999999999986 3334433332  2377888999999988   99999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0659|consensus

Probab=99.82  E-value=3.7e-20  Score=135.72  Aligned_cols=125  Identities=24%  Similarity=0.346  Sum_probs=104.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+|...+.+|+|+||.||+|.+.. +++.||+|.+.....   ......+|+.+++.+ +|+||+.+++.|..    ...
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~-t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~----~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTE-TGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPH----KSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecC-CCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccC----CCc
Confidence            468888999999999999999998 999999999987532   255689999999999 99999999999998    788


Q ss_pred             EEEEEecCCCCChhhhcCCCCCCh--hhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDL--DNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~--~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.||+||++ -+|...|+....-+  .....+  ..+.+++|+|.+.|   +||||||.|..
T Consensus        76 l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~I---lHRDlKPnNLL  133 (318)
T KOG0659|consen   76 LSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWI---LHRDLKPNNLL  133 (318)
T ss_pred             eEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhh---hcccCCccceE
Confidence            999999998 58888887332222  112222  66778999999999   99999999963

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.82  E-value=1.4e-19  Score=140.24  Aligned_cols=120  Identities=20%  Similarity=0.253  Sum_probs=100.0

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+....    .....+..|+.++..+ +|+||+.+++.+..    .+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~----~~~~~lv~   74 (323)
T cd05571           1 KLLGKGTFGKVILVREKA-TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQT----HDRLCFVM   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEc----CCEEEEEE
Confidence            368999999999999987 78899999987532    2345678899999998 99999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ...........  .+++.+|+|+|..|+   +|+||||+||.
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---vHrDlkp~NIl  127 (323)
T cd05571          75 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDV---VYRDLKLENLM  127 (323)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHEE
Confidence            9999999999886 33334433322  377889999999998   99999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.82  E-value=2.6e-19  Score=138.97  Aligned_cols=125  Identities=20%  Similarity=0.228  Sum_probs=105.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+.+.||+|+||.||++.+.. .+..+|+|.++...    .....+..|+.++..+ +|+|++.+++.+..    .+.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~----~~~   75 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKA-TGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQD----KDN   75 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEec----CCe
Confidence            58999999999999999999987 88899999988642    2445678899999988 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++..  .........  ..+.+.+|.|+|..++   +|+||||+||.
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i---~H~Dlkp~NIl  134 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY---VHRDIKPENVL  134 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EcccCchHheE
Confidence            9999999999999999963  344443332  2377888999999998   99999999984

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0593|consensus

Probab=99.82  E-value=1.9e-20  Score=139.66  Aligned_cols=125  Identities=14%  Similarity=0.190  Sum_probs=103.4

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|..+.++|+|+||.|++|..+. +|..||||..-...   .-.+..++|+.+++.+ +|+|+|+++..|..    ...+
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~-TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrr----krkl   76 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKD-TGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRR----KRKL   76 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCC-cccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHh----ccee
Confidence            57888899999999999999998 99999999875432   3456689999999999 99999999999998    7889


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||+|||++--|.++=+ +...+....  +.+|.+.++.|+|.+++   ||||+||+|+.
T Consensus        77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~---IHRDIKPENIL  133 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNC---IHRDIKPENIL  133 (396)
T ss_pred             EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCe---ecccCChhheE
Confidence            99999999644443333 555554443  33488889999999999   99999999984

>KOG0198|consensus

Probab=99.82  E-value=9e-20  Score=139.33  Aligned_cols=128  Identities=19%  Similarity=0.299  Sum_probs=105.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc-e
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS-E  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~-~  116 (176)
                      ..++...+.||+|+||.||.+.... ++...|+|.+.... ...+.+.+|+.++..+ +|||||+++|.....   .+ .
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~-~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~---~~~~   90 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKK-TGELMAVKSVELEDSPTSESLEREIRILSRL-NHPNIVQYYGSSSSR---ENDE   90 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecC-CCcceeeeeeecccchhHHHHHHHHHHHHhC-CCCCEEeeCCccccc---cCee
Confidence            3458889999999999999999987 78899999987652 2256789999999999 799999999985551   23 6


Q ss_pred             EEEEEecCCCCChhhhcCCC--CCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD--ELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++.|||+++|+|.+++...  .+..+..+..  +++.+|+|+|++|+   ||+||||+||.
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~---vH~DiK~~NiL  149 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI---VHCDIKPANIL  149 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eccCcccceEE
Confidence            99999999999999999832  3444443333  78889999999999   99999999984

>KOG0580|consensus

Probab=99.81  E-value=1.4e-20  Score=136.05  Aligned_cols=126  Identities=18%  Similarity=0.257  Sum_probs=107.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|.+.+.||.|.||.||.+..+. +.-.+|+|++...+    ....++.+|+.+-..| +||||+++++.|.+    ..
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekk-s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd----~~   95 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKK-SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHD----SK   95 (281)
T ss_pred             hhccccccccCCccccEeEeeecc-CCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheec----cc
Confidence            468999999999999999999988 78899999987653    2345688999999999 99999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC--C---CCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK--P---DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~--~---~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+||++||.++|++...|+  .   ........+..+...++.|+|.+++   ||||+||+|..
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V---IhRdiKpenlL  156 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV---IHRDIKPENLL  156 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc---ccCCCCHHHhc
Confidence            9999999999999999997  2   2223333455588889999999999   99999999964

>KOG0585|consensus

Probab=99.81  E-value=1.4e-19  Score=141.67  Aligned_cols=129  Identities=19%  Similarity=0.233  Sum_probs=102.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------------hhHHHHHHHHHHHHhccCCCCccee
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------------EFIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------------~~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      -+.|++.+.||+|.||.|.++.+.. .+..+|+|++++..               ...+.+.+|+.+|+++ .|+|||++
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~-~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~L  173 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEV-DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKL  173 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecC-CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEE
Confidence            3479999999999999999999988 88999999997531               1245789999999999 99999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcCCCC-CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE-LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+.-++.  ...+|||+|||..|.+...=.... +..+..  +...+..+|+|||.+||   |||||||+|..
T Consensus       174 iEvLDDP~--s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgi---iHRDIKPsNLL  242 (576)
T KOG0585|consen  174 IEVLDDPE--SDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGI---IHRDIKPSNLL  242 (576)
T ss_pred             EEeecCcc--cCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCe---eccccchhheE
Confidence            99987754  567999999999888754422222 233222  23366778999999999   99999999974

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.81  E-value=3.9e-19  Score=137.72  Aligned_cols=126  Identities=16%  Similarity=0.201  Sum_probs=102.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||+|+||.||+|.+.. ++..+|+|.+...    ......+..|..++..+..|++++.+++.+..    .+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----MDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc----CCE
Confidence            38899999999999999999987 7889999998753    22345678888888888445678889999888    788


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. ......+....  .+.+.+|+|+|..|+   +|+||||+||-
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~Nil  133 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVM  133 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeE
Confidence            999999999999999886 33334333322  367788999999998   99999999983

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0588|consensus

Probab=99.81  E-value=4.7e-20  Score=149.11  Aligned_cols=125  Identities=14%  Similarity=0.168  Sum_probs=109.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      -|++++.||.|+-|.|..|.+.. +|..+|||++....    .....+.+|+.+|+.+ .||||+.+++.|.+    ..+
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~-TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~----~~~   86 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAE-TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWEN----KQH   86 (786)
T ss_pred             ceeccccccCCCCceehhhhccc-ccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeecc----Cce
Confidence            48999999999999999999998 99999999998762    2345689999999999 99999999999999    899


Q ss_pred             EEEEEecCCCCChhhhcC-CCCC--ChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDEL--DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~--~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|++.||+++|.|+++|. .+.+  ......++|++.++.|+|+.+|   ||||+||+|..
T Consensus        87 lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~i---cHRDLKpENlL  144 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNI---CHRDLKPENLL  144 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcc---eeccCCchhhh
Confidence            999999999999999987 3333  3333456699999999999999   99999999963

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.81  E-value=3.3e-19  Score=138.21  Aligned_cols=120  Identities=17%  Similarity=0.239  Sum_probs=99.1

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+...    ......+..|+.++..+ +|||++++++.+..    ...+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~----~~~~~lv~   74 (323)
T cd05595           1 KLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQT----HDRLCFVM   74 (323)
T ss_pred             CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEec----CCEEEEEE
Confidence            368999999999999987 7889999998753    22345677899999998 99999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus        75 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  127 (323)
T cd05595          75 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV---VYRDIKLENLM  127 (323)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEE
Confidence            9999999998886 3333333322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0663|consensus

Probab=99.81  E-value=3.3e-20  Score=139.84  Aligned_cols=127  Identities=19%  Similarity=0.147  Sum_probs=103.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.|..+..|++|+||.||++.+.. +++.||+|.++...+   ..-.-.+|+.++..+ +|+|||.+......++  -+.
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~-t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~--~d~  151 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKK-TDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSN--MDK  151 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCC-cceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccc--cce
Confidence            459999999999999999999998 999999999987542   334568999999998 9999999999887743  567


Q ss_pred             EEEEEecCCCCChhhhcC--C--CCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--P--DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~--~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+|||||++ +|..+|.  .  ...........|.+-+++|+|...|   +|||||++|..
T Consensus       152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wi---lHRDLK~SNLL  209 (419)
T KOG0663|consen  152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWI---LHRDLKTSNLL  209 (419)
T ss_pred             eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhcee---Eecccchhhee
Confidence            9999999985 6766664  2  2222323345588889999999999   99999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.81  E-value=3.3e-19  Score=138.49  Aligned_cols=120  Identities=18%  Similarity=0.237  Sum_probs=99.7

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.+++.+ +|+||+++.+.+..    .+.+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~~~~lv~   74 (328)
T cd05593           1 KLLGKGTFGKVILVREKA-SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQT----KDRLCFVM   74 (328)
T ss_pred             CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEc----CCEEEEEE
Confidence            368999999999999987 7889999998753    23445678899999998 99999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+++.+|+|+|..++   +|+||||+||.
T Consensus        75 Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDikp~NIl  127 (328)
T cd05593          75 EYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI---VYRDLKLENLM  127 (328)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EecccCHHHeE
Confidence            9999999998886 3333333322  2377889999999998   99999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0587|consensus

Probab=99.81  E-value=5.1e-19  Score=146.62  Aligned_cols=143  Identities=26%  Similarity=0.389  Sum_probs=121.1

Q ss_pred             CcccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          28 DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      ..++++..+++.+.|.+.+.+|.|.+|.||++.... ++..+|+|++......-.++..|..+++..+.|||++.++++|
T Consensus         7 ~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~-~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen    7 MDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVK-TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             cccchhhCCCCCCccEEEEEEeeccceeEEEEeeee-cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            345788889999999999999999999999999988 8889999999887766677889999999998999999999999


Q ss_pred             Eecc-CCcceEEEEEecCCCCChhhhcCCC---CCChhh-Hh-hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKH-QTHSEIWFVMQREAEMPPPRALKPD---ELDLDN-LQ-DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~-~~-~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+. +.++.+|||||||.+|+..|+++..   .++... .+ ..+.+.++.+||...+   +|||+|.+||+
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv---iHRDikG~NiL  155 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV---IHRDIKGQNVL  155 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce---eeecccCceEE
Confidence            7666 6678899999999999999999722   222211 12 2277889999999888   99999999996

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.81  E-value=4.9e-19  Score=137.65  Aligned_cols=125  Identities=18%  Similarity=0.143  Sum_probs=103.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+.+.||+|+||.||++.... .+..+|+|.+....    .....+..|..++..+ +|++++.+++.+..    .+.
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~   75 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQD----ENN   75 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECC-CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEec----CCE
Confidence            58999999999999999999987 78899999986532    2334577888888888 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++..  .........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i---iHrDlkp~Nil  134 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY---VHRDIKPDNIL  134 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEE
Confidence            9999999999999999963  333433332  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.81  E-value=4.2e-19  Score=133.79  Aligned_cols=127  Identities=17%  Similarity=0.188  Sum_probs=102.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..|++.+.||+|+||.||++.+..+  .+..+|+|.+...  ......+..|+.++..+ +|+|++++++.+..    .+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITR----GN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEec----CC
Confidence            4699999999999999999976420  3468999988764  23445788999999998 99999999999987    78


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||+++|+|.+++..  ..........  .+...+|+|+|..++   +|+|++|+|+.
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i---iH~dikp~nil  139 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY---VHKGLAAHKVL  139 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eeccccHhhEE
Confidence            89999999999999999863  2333333222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.81  E-value=4.7e-19  Score=135.90  Aligned_cols=128  Identities=15%  Similarity=0.172  Sum_probs=101.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecC---------------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQ---------------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIP  101 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~---------------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv  101 (176)
                      ..+|.+.+.||+|+||.||+|.+..               +.+..+|+|.+...  ......+.+|+.++..+ +|+||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv   82 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNII   82 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCee
Confidence            4579999999999999999997532               02346999998764  33456789999999999 999999


Q ss_pred             eeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCC--------------------Chhh--HhhhhhHHHHHHHHhcC
Q psy9091         102 DFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDEL--------------------DLDN--LQDCGDRYELGYVIGSG  159 (176)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~--~~~~~~~~~l~~lh~~~  159 (176)
                      ++++.+..    .+..+++|||+++|+|.+++.....                    ....  ....+...+|+|+|..|
T Consensus        83 ~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          83 RLLGVCVD----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             EEEEEEec----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999988    7889999999999999998852110                    1111  12337778899999999


Q ss_pred             CCccccccCCCCCcc
Q psy9091         160 VCADVYEALDTQNVT  174 (176)
Q Consensus       160 i~~~v~~~~~~~nv~  174 (176)
                      +   +|+||||+||.
T Consensus       159 i---vH~dlkp~Nil  170 (304)
T cd05096         159 F---VHRDLATRNCL  170 (304)
T ss_pred             c---cccCcchhheE
Confidence            8   99999999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=4.7e-19  Score=135.10  Aligned_cols=125  Identities=17%  Similarity=0.186  Sum_probs=102.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|.+.+.||+|+||.||+|.+.. ++..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+..    ....
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~   78 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKL-TENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHT----ERCL   78 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECC-CCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcC----CCeE
Confidence            459999999999999999999987 78899999987532  2344678899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++ |+|.+++..  ........  ...+...+|+|+|..|+   +|+||||+||.
T Consensus        79 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~Nil  135 (288)
T cd07871          79 TLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI---LHRDLKPQNLL  135 (288)
T ss_pred             EEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            99999998 589888852  22333332  22377888999999998   99999999984

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0661|consensus

Probab=99.81  E-value=7.2e-21  Score=148.74  Aligned_cols=130  Identities=20%  Similarity=0.157  Sum_probs=106.5

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhH--HHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFI--DDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~--~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+-++|+++++||.|+||.||++.... +++.||||.+.......  ..-.+|+..++++..||||+++...+.+    
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~-~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d----   80 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKE-TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD----   80 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecC-CCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----
Confidence            3445689999999999999999999988 88999999887643222  2347899999999559999999999998    


Q ss_pred             cc-eEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HS-EIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~-~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .. .+++|||||+ .+|.++++  .....+...  .+.|++.+|+++|.+|.   -||||||+|+.
T Consensus        81 ~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~Gf---FHRDlKPENiL  142 (538)
T KOG0661|consen   81 NDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGF---FHRDLKPENIL  142 (538)
T ss_pred             cCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCc---ccccCChhheE
Confidence            45 8999999997 79999998  233333333  33488999999999999   99999999984

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.81  E-value=4.9e-19  Score=137.17  Aligned_cols=124  Identities=19%  Similarity=0.241  Sum_probs=100.8

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHH---hccCCCCcceeceeEEeccCCc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLR---DLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~---~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      |.+.+.||+|+||.||.+.+.. ++..+|+|.+....    .....+..|..++.   .+ +|+||+++++.+..    .
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~----~   74 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKK-TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQT----E   74 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEc----C
Confidence            6788999999999999999987 78899999987532    23445666766554   44 79999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||+++|+|..++...........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        75 ~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i---vHrdlkp~Nil  133 (324)
T cd05589          75 DHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKI---VYRDLKLDNLL  133 (324)
T ss_pred             CEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EecCCCHHHeE
Confidence            899999999999999988875444443332  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.5e-19  Score=137.31  Aligned_cols=118  Identities=14%  Similarity=0.171  Sum_probs=98.3

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||+|+||.||++.+.. ++..+|+|.+...    ......+..|+.++..+ +|+||+++++.+..    .+.++++|||
T Consensus         1 lg~G~~g~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRD-TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQS----PEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEec----CCeEEEEEcC
Confidence            6899999999999987 7889999998753    23445678899999998 99999999999988    7899999999


Q ss_pred             CCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++. ....+.....  ..+.+.+|.|+|..++   +|+||||+||.
T Consensus        75 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~HrDlkp~Nil  125 (312)
T cd05585          75 INGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNV---IYRDLKPENIL  125 (312)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHeE
Confidence            99999999986 3334433332  2367778999999998   99999999984

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.81  E-value=1.2e-18  Score=135.39  Aligned_cols=127  Identities=18%  Similarity=0.260  Sum_probs=105.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.|++.+.||+|+||.||++.+.. .+..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+..    .+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   77 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKP-SGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS----DGE   77 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECC-CCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEE----CCE
Confidence            3579999999999999999999987 7889999998764  23456789999999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++.. ........  ...+...+|.|+|.. ++   +|+|+||+||.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i---vH~dlkp~Nil  136 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI---MHRDVKPSNIL  136 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCE---EcCCCChhhEE
Confidence            9999999999999999862 33333222  223667789999975 46   99999999984

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.80  E-value=6.3e-19  Score=136.93  Aligned_cols=121  Identities=21%  Similarity=0.280  Sum_probs=99.8

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. ++..+|+|.++..    ......+..|..++..+.+||||+++++.+..    .+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~----~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK-TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT----ESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc----CCEEEEEE
Confidence            368999999999999987 7889999999863    22345678899999887689999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+...+|.|+|..|+   +|+||||+||.
T Consensus        76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  128 (329)
T cd05588          76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGI---IYRDLKLDNVL  128 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeE
Confidence            9999999998886 3334443332  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0193|consensus

Probab=99.80  E-value=8.2e-20  Score=146.38  Aligned_cols=133  Identities=23%  Similarity=0.323  Sum_probs=113.8

Q ss_pred             cccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          29 ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      ......|..+.+...+...||+|.||+||+|.|..    .||||.++..   .+..+.|.+|+.+++.- +|.||+=+.|
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG----dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG  455 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG----DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMG  455 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc----ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeeh
Confidence            34557788888888999999999999999999853    6999999864   45788999999999998 9999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcC--CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++.     ..+.||+.+|+|.+|..+|.  +...+...++..  |+.++|.|||.++|   ||||||+.||-
T Consensus       456 ~~~~-----p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I---IHrDLKSnNIF  520 (678)
T KOG0193|consen  456 ACMN-----PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI---IHRDLKSNNIF  520 (678)
T ss_pred             hhcC-----CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh---hhhhccccceE
Confidence            9987     34599999999999999997  556665554444  78889999999999   99999999984

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=7.3e-19  Score=133.84  Aligned_cols=124  Identities=15%  Similarity=0.076  Sum_probs=101.8

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      |+..+.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +|++++.+.+.+..    .+.+
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~----~~~~   75 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYET----KDAL   75 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEec-CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEcc----CCeE
Confidence            7889999999999999999987 78899999987532    2234578899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+.+..   ...+......  .+...+|+|+|..++   +|+||||+||-
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---iH~dikp~Nil  134 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI---VYRDLKPENIL  134 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCCCHHHEE
Confidence            999999999999887741   2233333222  267778999999998   99999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.80  E-value=8.1e-19  Score=134.63  Aligned_cols=125  Identities=21%  Similarity=0.210  Sum_probs=102.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ++|.+.+.||+|+||.||++.+.. ++..+|+|.+....  .....+.+|+.+++.+ +|+|++.+++.+..    ....
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~   78 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKV-NGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHT----KETL   78 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECC-CCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEec----CCeE
Confidence            579999999999999999999987 78899999987542  2234577899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||++ ++|.+++..  ........  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus        79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~Nil  135 (303)
T cd07869          79 TLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI---LHRDLKPQNLL  135 (303)
T ss_pred             EEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            99999996 678777752  22333222  23377889999999998   99999999984

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.80  E-value=9.6e-19  Score=136.16  Aligned_cols=127  Identities=18%  Similarity=0.269  Sum_probs=105.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .++|++.+.||+|+||.||++.+.. .+..+++|.+...  ......+.+|+.++..+ +|+||+++++.+..    .+.
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   77 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKP-SGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS----DGE   77 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECC-CCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEE----CCE
Confidence            3579999999999999999999987 7888999988754  23455689999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++. ....+.+...  ..+...+|.|+|.. ++   +|+||||+||-
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i---vH~dlkp~Nil  136 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI---MHRDVKPSNIL  136 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCE---EecCCChhhEE
Confidence            999999999999999986 3334433322  22666789999974 56   99999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.80  E-value=8.7e-19  Score=135.74  Aligned_cols=126  Identities=16%  Similarity=0.209  Sum_probs=102.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+..|++++.+++.+..    .+.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT----MDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec----CCE
Confidence            37889999999999999999987 78899999987632    2334567777887776578999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++. ..........  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~Nil  133 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVM  133 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EecCCCHHHeE
Confidence            999999999999998886 3334433332  2377788999999988   99999999983

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0611|consensus

Probab=99.80  E-value=3.7e-20  Score=143.05  Aligned_cols=129  Identities=19%  Similarity=0.247  Sum_probs=110.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +..-+|.+.+.||.|+||.|.++.... .++.||+|.|+..    ..+...+.+|+.+|..| +||||+.++..|..   
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~-sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFEN---  124 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHK-SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFEN---  124 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhcc-CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcC---
Confidence            344579999999999999999999877 7899999999875    24567899999999999 99999999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+.|||||..+|.|.|+|. ...+....  ..+.|+.-++-|+|.+++   ||||||-+||.
T Consensus       125 -kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrV---vHRDLKLENIL  185 (668)
T KOG0611|consen  125 -KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRV---VHRDLKLENIL  185 (668)
T ss_pred             -CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccc---eecccchhhee
Confidence             788999999999999999997 44443322  234477778999999888   99999999984

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=1.3e-18  Score=134.96  Aligned_cols=120  Identities=18%  Similarity=0.246  Sum_probs=98.5

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||.+.+.. ++..+|+|.+....    .....+..|+.++..+ +|+||+.+.+.+..    ...+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~----~~~~~lv~   74 (325)
T cd05594           1 KLLGKGTFGKVILVKEKA-TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQT----HDRLCFVM   74 (325)
T ss_pred             CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEc----CCEEEEEE
Confidence            368999999999999987 88999999987532    2345677899999998 99999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+++.+|+|+|. .|+   +|+||||+||.
T Consensus        75 E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~i---vHrDikp~NIl  128 (325)
T cd05594          75 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV---VYRDLKLENLM  128 (325)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCE---EecCCCCCeEE
Confidence            9999999998886 3333433332  2377788999997 788   99999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.80  E-value=4.1e-19  Score=140.41  Aligned_cols=97  Identities=20%  Similarity=0.234  Sum_probs=80.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEec----CCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDT----QNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .+..+.++|.+.+.||+|+||.||+|.+.    .+.+..+|+|.+....  .....+.+|+.++..+.+||||+++++.+
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            34555668999999999999999999742    1134589999987532  34567889999999886899999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      ..    ....++||||+++|+|.++++
T Consensus       109 ~~----~~~~~lv~E~~~~g~L~~~l~  131 (375)
T cd05104         109 TV----GGPTLVITEYCCYGDLLNFLR  131 (375)
T ss_pred             cc----CCcceeeehhccCCcHHHHHH
Confidence            88    788999999999999999885

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.80  E-value=1.1e-18  Score=135.31  Aligned_cols=125  Identities=16%  Similarity=0.206  Sum_probs=101.6

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      |...+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+|++++.+++.+..    .+.+
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~   76 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT----VDRL   76 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec----CCEE
Confidence            6788999999999999999987 78899999987532    2344577788888887566888899999888    7889


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+||||+++|+|.+++. ......+...  ..+.+.+|+|+|..|+   +|+||||+||-
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---vHrDikp~Nil  133 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGI---IYRDLKLDNVM  133 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeE
Confidence            99999999999999986 3334443332  2377788999999998   99999999973

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG4250|consensus

Probab=99.80  E-value=9.9e-20  Score=148.03  Aligned_cols=128  Identities=20%  Similarity=0.255  Sum_probs=102.1

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~~~  117 (176)
                      +...+.||+|+||.||++..+. +|+.+|+|..+...  ...+.+.+|+.+++++ +|+|||++.+.-.+..  ......
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnke-tG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKE-TGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eeehhhhcCCccceeeeecccc-cccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccc
Confidence            4455899999999999999888 89999999988743  3567899999999999 7999999998876521  112346


Q ss_pred             EEEEecCCCCChhhhcC-C---CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-P---DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~---~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++||||.||+|...|. +   ..+........  .+..+|.+||.+||   |||||||+||.
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I---vHRDlKP~NIv  152 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI---VHRDLKPGNIV  152 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc---eeccCCCCcEE
Confidence            88999999999999997 2   23333332222  45678999999999   99999999984

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.80  E-value=7.3e-19  Score=137.78  Aligned_cols=126  Identities=18%  Similarity=0.168  Sum_probs=102.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...|..++.||+|+||.||++.+.. .+..+|+|.+...  ......+.+|+.+++.+ +|+||+++++.+..    .+.
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~  146 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRP-TGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDH----NGE  146 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECC-CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEecc----CCe
Confidence            3468888999999999999999987 7889999998654  23456788999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+..... .........+++.+|+|+|..++   +|+||||+||.
T Consensus       147 ~~lv~e~~~~~~L~~~~~~~-~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~NIl  200 (353)
T PLN00034        147 IQVLLEFMDGGSLEGTHIAD-EQFLADVARQILSGIAYLHRRHI---VHRDIKPSNLL  200 (353)
T ss_pred             EEEEEecCCCCcccccccCC-HHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEE
Confidence            99999999999987654211 11111223477888999999998   99999999984

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.2e-18  Score=132.57  Aligned_cols=125  Identities=14%  Similarity=0.089  Sum_probs=102.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.+++.+ +|+|++.+++.+..    ++.
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   74 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYET----KDA   74 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcC-CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecC----CCe
Confidence            38889999999999999999887 78899999987532    1234567899999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++..   ...+.+...  ..+...+|.|+|..++   +|+||+|+||.
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  134 (285)
T cd05605          75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI---VYRDLKPENIL  134 (285)
T ss_pred             EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc---EecCCCHHHEE
Confidence            9999999999999888742   223433332  2367778999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.79  E-value=1.3e-18  Score=135.25  Aligned_cols=121  Identities=21%  Similarity=0.294  Sum_probs=98.9

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. ++..+|+|.+...    ......+..|..++..+.+|+||+++++.+..    .+.+++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~----~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK-TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----ESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe----CCEEEEEE
Confidence            368999999999999987 7889999998763    23445677888888776589999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dikp~Nil  128 (329)
T cd05618          76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI---IYRDLKLDNVL  128 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEE
Confidence            9999999998876 3334433322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.79  E-value=9.4e-19  Score=135.44  Aligned_cols=121  Identities=20%  Similarity=0.241  Sum_probs=98.2

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||+|.+.. .+..+|+|.+....    .....+..|..++..+.+|+||+.+++.+..    .+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~----~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG-TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT----KDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc----CCeEEEEE
Confidence            368999999999999987 78899999987532    2344567788888876589999999999988    78899999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+.+. ....+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDikp~Nil  128 (321)
T cd05591          76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGV---IYRDLKLDNIL  128 (321)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeE
Confidence            9999999998886 333333332  23377788999999998   99999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.79  E-value=1.9e-18  Score=134.17  Aligned_cols=127  Identities=17%  Similarity=0.258  Sum_probs=101.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecC--CCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQ--NGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .|++.+.||+|+||.||++....  +.+..+|+|.+....     .....+..|+.++..+.+|++|+.+++.+..    
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT----   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence            38899999999999999987632  146789999987531     2345578899999998669999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.++++|||+++|+|.+++. ..........  ..++..+|+|+|..|+   +|+||||+||.
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vHrDlkp~Nil  137 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI---VYRDIKLENIL  137 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---EecCCCHHHeE
Confidence            788999999999999999986 3333333322  2277788999999998   99999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.79  E-value=1.1e-18  Score=132.56  Aligned_cols=126  Identities=17%  Similarity=0.256  Sum_probs=103.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|+||.||++.+.. ++..+|+|.+....   .....+.+|+.++..+ +|+||+++++.+..    ...
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   74 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKE-TKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRR----RGK   74 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECC-CCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEec----CCE
Confidence            369999999999999999999987 78899999987532   2345678899999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||++++.+..+.. .........  ...++..+|.|+|..++   +|+||||+||.
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dlkp~Nil  132 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI---VHRDIKPENLL  132 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            999999999887765543 233443332  22377788999999998   99999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0594|consensus

Probab=99.79  E-value=2.2e-19  Score=136.03  Aligned_cols=130  Identities=18%  Similarity=0.197  Sum_probs=105.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCC-cceeceeEEecc--C
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSN-IPDFFGAYMKKH--Q  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~n-iv~~~~~~~~~~--~  112 (176)
                      ...|..++++|+|+||.||+|.... ++..||+|.++...+   ......+|+.+++.+ +|+| |+.+++.+.+.+  +
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~-~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKR-TGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEec-CCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeeccccc
Confidence            3457788899999999999999988 889999999987643   345679999999999 9999 999999998831  1


Q ss_pred             CcceEEEEEecCCCCChhhhcCC-----CCCCh--hhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP-----DELDL--DNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~--~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|+||++ -+|.+++..     ...+.  -...+.|.+.+|+|+|+.+|   +||||||+|+.
T Consensus        88 ~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~I---lHRDLKPQNlL  152 (323)
T KOG0594|consen   88 GIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGI---LHRDLKPQNLL  152 (323)
T ss_pred             ccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccCCcceEE
Confidence            1128999999997 688888862     12332  22345588999999999999   99999999974

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.79  E-value=2e-18  Score=131.05  Aligned_cols=141  Identities=21%  Similarity=0.386  Sum_probs=111.5

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +.++.+....++|++.+.||+|+||.||++.+.. .+..+++|.+.........+.+|+.++..+.+|+|++++++.+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKK-NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECC-CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            5678888899999999999999999999999987 788999998776443445678899999887579999999998743


Q ss_pred             cc-CCcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KH-QTHSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~-~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .. ..++.++++|||+++|+|.+++.     ....+....  ...+...+|.|+|..++   +|+|++|+||.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil  156 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT---IHRDVKGNNIL  156 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc---cccCCCHHhEE
Confidence            21 12567999999999999998864     122232221  22366778999999998   99999999984

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.79  E-value=1e-18  Score=135.07  Aligned_cols=121  Identities=20%  Similarity=0.235  Sum_probs=96.7

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. ++..+|+|.+....    ........|..++..+.+|+||+++++.+..    ...+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~----~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG-TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT----KEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc----CCEEEEEE
Confidence            368999999999999987 78899999987532    2334456666767655589999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ....+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---vH~dlkp~Nil  128 (316)
T cd05592          76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI---IYRDLKLDNVL  128 (316)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EeCCCCHHHeE
Confidence            9999999999886 3334433322  3377888999999988   99999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.79  E-value=1.6e-18  Score=129.76  Aligned_cols=125  Identities=18%  Similarity=0.180  Sum_probs=102.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      +.|++.+.||+|+||.||++.+..  +..+++|.+.........+..|+.+++.+ +|+|++++++.+..    ...+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~--~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~i   76 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA--QIKVAIKAINEGAMSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQ----QKPLYI   76 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc--CceEEEEecccCCccHHHHHHHHHHHHHC-CCCCceeEEEEEcc----CCCEEE
Confidence            358889999999999999998754  45789998775444456788899999999 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.+++..  ...+......  .+...+|+|+|..++   +|+|++|+||-
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~  132 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF---IHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccCcceEE
Confidence            9999999999999862  2233332222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=1.3e-18  Score=134.58  Aligned_cols=121  Identities=19%  Similarity=0.248  Sum_probs=97.4

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||+|.+.. ++..+|+|.+....    ........|..++....+||||+++++.+..    ...+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~----~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT----KENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe----CCEEEEEE
Confidence            368999999999999987 78899999987632    2334456677777764499999999999988    78899999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ....+....  ...+.+.+|+|+|..++   +|+|+||+||-
T Consensus        76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---vHrdikp~Nil  128 (316)
T cd05619          76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI---VYRDLKLDNIL  128 (316)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHEE
Confidence            9999999999986 333443332  23377888999999998   99999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.79  E-value=1.6e-18  Score=134.57  Aligned_cols=121  Identities=19%  Similarity=0.247  Sum_probs=99.9

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.... .+..+|+|.+....    .....+..|..++..+.+|+||+.+++.+..    .+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKK-NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT----TSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe----CCEEEEEE
Confidence            368999999999999987 78899999998642    2445678899988887679999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+.+.+|+|+|..|+   +|+||||+||-
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~Nil  128 (327)
T cd05617          76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI---IYRDLKLDNVL  128 (327)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEE
Confidence            9999999998886 3344443332  2377789999999998   99999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0201|consensus

Probab=99.79  E-value=5.3e-20  Score=142.63  Aligned_cols=129  Identities=24%  Similarity=0.395  Sum_probs=111.5

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+...|+.++.||+|+||.||+|.+.. ++..+|+|+++...  .....+..|+.++..+ +++||.++++.|..    +
T Consensus        10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~-t~k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~----g   83 (467)
T KOG0201|consen   10 DPELLYTKLELIGRGSFGEVYKAIDNK-TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLK----G   83 (467)
T ss_pred             Ccccccccchhccccccceeeeeeecc-ccceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheee----c
Confidence            344568888999999999999999988 88999999999863  4677899999999998 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCC-Chhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDEL-DLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|++|||+.||++.+.|+.+.. ++..  .....++.++.|+|..+.   +|||+|.-||.
T Consensus        84 ~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~k---iHrDIKaanil  143 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKK---IHRDIKAANIL  143 (467)
T ss_pred             ccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcce---eccccccccee
Confidence            999999999999999999984433 3322  234478899999999999   99999999984

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.79  E-value=1.1e-18  Score=135.21  Aligned_cols=121  Identities=18%  Similarity=0.255  Sum_probs=98.3

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+....    .....+..|..++..+..|+||+++++.+..    .+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~----~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKE-SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT----PDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcC-CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc----CCEEEEEE
Confidence            368999999999999987 78899999987532    2344567788888776579999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ....+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~i---vH~dlkp~NIl  128 (320)
T cd05590          76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGI---IYRDLKLDNVL  128 (320)
T ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHeE
Confidence            9999999999886 3344443332  2367788999999998   99999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.79  E-value=2.4e-18  Score=129.44  Aligned_cols=129  Identities=22%  Similarity=0.390  Sum_probs=106.5

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .....|++.+.||+|+||.||++.+.. .+..+++|.+.... .....+..|+.++..+ +|+|++++++.+..    .+
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~----~~   79 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLH-TGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLS----RE   79 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECC-CCeEEEEEEEecCccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEe----CC
Confidence            344579999999999999999999877 78899999987543 2345678899999998 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++. ....+.....  ..+...+|+|+|..++   +|+|++|+||.
T Consensus        80 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil  138 (267)
T cd06646          80 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGK---MHRDIKGANIL  138 (267)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            9999999999999999886 3333433322  2266778999999998   99999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.79  E-value=2.5e-18  Score=144.87  Aligned_cols=126  Identities=16%  Similarity=0.198  Sum_probs=105.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||+|.+.. .+..+|+|.+...    ......+..|+.++..+ +|+||+.++..+..    ..
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~----~~   77 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKN-NSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQS----AN   77 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEE----CC
Confidence            469999999999999999999987 7889999998753    22346688899999998 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++++|.+++. .........  ...+++.+|+|+|..+|   ||+||||+||.
T Consensus        78 ~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gI---iHrDLKP~NIL  136 (669)
T cd05610          78 NVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGI---IHRDLKPDNML  136 (669)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCccHHHEE
Confidence            9999999999999999986 223333222  23377889999999887   99999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.79  E-value=1.4e-18  Score=134.34  Aligned_cols=121  Identities=17%  Similarity=0.216  Sum_probs=97.7

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. ++..+|+|.+....    ........|..++....+|+|++++++.+..    .+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG-KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT----KEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe----CCEEEEEE
Confidence            468999999999999987 88899999987632    2344566777777764489999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ....+.....  ..+.+.+|+|+|..|+   +|+||||+||-
T Consensus        76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vHrDlkp~Nil  128 (316)
T cd05620          76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI---IYRDLKLDNVM  128 (316)
T ss_pred             CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeE
Confidence            9999999999886 3334443322  2377788999999998   99999999973

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.78  E-value=1.2e-18  Score=138.75  Aligned_cols=98  Identities=22%  Similarity=0.246  Sum_probs=80.9

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      ..+..+.+.|.+++.||+|+||.||+|.+...    .+..+|+|.+....  .....+.+|+.++..+..||||+++++.
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~  109 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA  109 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence            34666778899999999999999999986420    23469999987542  3456789999999998459999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcC
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      +..    .+.+|+||||+++|+|.++|.
T Consensus       110 ~~~----~~~~~lv~Ey~~~g~L~~~l~  133 (400)
T cd05105         110 CTK----SGPIYIITEYCFYGDLVNYLH  133 (400)
T ss_pred             Ecc----CCceEEEEEecCCCcHHHHHH
Confidence            988    788999999999999998874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.78  E-value=4.2e-18  Score=130.39  Aligned_cols=132  Identities=20%  Similarity=0.317  Sum_probs=109.3

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +..++..+|++.+.||+|+||.||++.+.. .+..+++|.+.... .....+..|+.+++.+ .|+|++++++.+..   
T Consensus        14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~---   88 (296)
T cd06654          14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLV---   88 (296)
T ss_pred             ccCCcccceeeEEEecCCCCeEEEEEEECC-CCcEEEEEEEecCCcchHHHHHHHHHHHHhC-CCCCEeeEEEEEEe---
Confidence            345666789999999999999999999877 78899999887643 2346688899999998 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +...|+||||+++++|.+++..........  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        89 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi---~H~dLkp~Nil  148 (296)
T cd06654          89 -GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNIL  148 (296)
T ss_pred             -CCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence             789999999999999999986433333332  22367778999999998   99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.78  E-value=8.4e-19  Score=138.60  Aligned_cols=99  Identities=20%  Similarity=0.283  Sum_probs=81.4

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      .+.|.-+.++|.+.+.||+|+||.||++.+..    +....+|+|.+...  ......+..|+.+++.+.+|+||+++++
T Consensus        30 ~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~  109 (374)
T cd05106          30 NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLG  109 (374)
T ss_pred             cccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEee
Confidence            34455667789999999999999999988632    02347999998753  3345678899999998768999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcC
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      .+..    ...++++|||+++|+|.+++.
T Consensus       110 ~~~~----~~~~~lv~ey~~~g~L~~~l~  134 (374)
T cd05106         110 ACTH----GGPVLVITEYCCYGDLLNFLR  134 (374)
T ss_pred             EecC----CCCeEEeHhhccCCcHHHHHH
Confidence            9988    788999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.78  E-value=6.4e-18  Score=137.50  Aligned_cols=127  Identities=15%  Similarity=0.156  Sum_probs=102.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCC-CeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNG-NKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~-~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...|.+.+.||+|+||.||.+.... . +..+++|.+.... .....+.+|+.++..+ +||||+++++.+..    .+.
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~-~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~----~~~  139 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGS-DPKEKVVAKFVMLNDERQAAYARSELHCLAAC-DHFGIVKHFDDFKS----DDK  139 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcC-CCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEE----CCE
Confidence            3459999999999999999998876 5 6788888775543 3445678899999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.++|..     ........  ...+++.+|.|+|..++   +||||||+||.
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i---vHrDlkp~NIl  201 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM---MHRDLKSANIF  201 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE---EECCcCHHhEE
Confidence            9999999999999987741     12333222  23377788999999988   99999999984

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.78  E-value=3.7e-18  Score=132.56  Aligned_cols=128  Identities=24%  Similarity=0.296  Sum_probs=101.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~~~  116 (176)
                      +|++.+.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.... .....
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~   78 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTH-TGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD   78 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECC-CCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence            48999999999999999999987 7889999988742   12344678999999999 9999999999886532 11245


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|++|||++ ++|.+++. .........  ...+...+|+|+|..|+   +|+||||+||.
T Consensus        79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIl  135 (338)
T cd07859          79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANV---FHRDLKPKNIL  135 (338)
T ss_pred             EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence            899999996 78988886 233333332  22377788999999998   99999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.78  E-value=2.6e-18  Score=128.82  Aligned_cols=127  Identities=19%  Similarity=0.256  Sum_probs=104.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..+.|++.+.||+|+||.||++....  +..+++|.+.........+..|+.+++.+ +|+|++++++.+..    .+..
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   76 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNN--STKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTK----EEPI   76 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecC--CceEEEEEccCCchhHHHHHHHHHHHHhC-CCCCeeeEEEEEcC----CCCc
Confidence            34679999999999999999998754  56799998876544567789999999999 99999999999887    7889


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++..   .........  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i---~H~dl~p~nil  135 (261)
T cd05072          77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY---IHRDLRAANVL  135 (261)
T ss_pred             EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhhEE
Confidence            999999999999999862   223333322  2367778999999988   99999999973

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.2e-18  Score=131.94  Aligned_cols=129  Identities=19%  Similarity=0.292  Sum_probs=108.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++.++|.+++.||.|+||.||++.+.. .+..+++|.+.... .....+..|+.+++.+ +|+|++++++.+..    ..
T Consensus         2 ~~~~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   75 (280)
T cd06611           2 NPNDIWEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPNIVGLYEAYFY----EN   75 (280)
T ss_pred             CchhHHHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEec----CC
Confidence            456779999999999999999999877 77899999987643 3556788999999999 89999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..|++|||+++++|.+++..  ...+.+....  .+...+|.|+|..++   +|+|++|+||.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~nil  135 (280)
T cd06611          76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV---IHRDLKAGNIL  135 (280)
T ss_pred             eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChhhEE
Confidence            99999999999999999862  2334433322  366778999999998   99999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0591|consensus

Probab=99.78  E-value=1.3e-20  Score=139.38  Aligned_cols=133  Identities=17%  Similarity=0.195  Sum_probs=104.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec---ChhhHHHHHHHHHHHHhccCCCCcceece-eEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI---NPEFIDDIKEEYRMLRDLSQHSNIPDFFG-AYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~---~~~~~~~~~~e~~~~~~l~~h~niv~~~~-~~~~~~  111 (176)
                      ..+...|.++++||+|+||.||++.... ++..+|.|-+.-   +.+..+.+..|+.+++.| +||||+++++ .+... 
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~-~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~-   91 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLL-DGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIED-   91 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeecc-CcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhcc-
Confidence            4455679999999999999999999988 889999998874   245677899999999999 9999999998 55441 


Q ss_pred             CCcceEEEEEecCCCCChhhhcC---C--CCCChhhH--hhhhhHHHHHHHHh--cCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK---P--DELDLDNL--QDCGDRYELGYVIG--SGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~---~--~~~~~~~~--~~~~~~~~l~~lh~--~~i~~~v~~~~~~~nv~  174 (176)
                        .+.++|+||||++|+|..+|+   .  ...+++..  .+.+.+.+|..+|.  .. -.++||||||.||-
T Consensus        92 --~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r-~~VmHRDIKPaNIF  160 (375)
T KOG0591|consen   92 --NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPR-GTVMHRDIKPANIF  160 (375)
T ss_pred             --chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccc-cceeeccCcchheE
Confidence              344999999999999999997   2  23333221  12267778999997  22 22699999999984

>KOG0586|consensus

Probab=99.78  E-value=1.9e-18  Score=138.59  Aligned_cols=130  Identities=18%  Similarity=0.177  Sum_probs=111.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ......|.+.+.||+|.|+.|..+.+.. ++..||+|.+....   ..+..+.+|+++|+.+ .||||+++++...+   
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~-t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t---  126 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHIL-TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIET---  126 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecC-CCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeee---
Confidence            3444579999999999999999999988 89999999998753   3455689999999999 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|+||||+.+|.++++|..   .........+++..-+++|+|.+.+   ||||||.+|+.
T Consensus       127 -~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~i---vHrdLk~eNil  187 (596)
T KOG0586|consen  127 -EATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNI---VHRDLKAENIL  187 (596)
T ss_pred             -cceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcce---eccccchhhcc
Confidence             7899999999999999999972   2224444566688889999999999   99999999984

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.78  E-value=3.6e-18  Score=130.81  Aligned_cols=131  Identities=21%  Similarity=0.323  Sum_probs=108.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..++..+|.+.+.||+|+||.||++.+.. .+..+++|.+.... .....+..|+.+++.+ +|+|++++++.+..    
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----   87 (297)
T cd06656          14 VGDPKKKYTRFEKIGQGASGTVYTAIDIA-TGQEVAIKQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLV----   87 (297)
T ss_pred             cCChhhhceeeeeeccCCCeEEEEEEECC-CCCEEEEEEEecCccchHHHHHHHHHHHHhC-CCCCEeeEEEEEec----
Confidence            45666789999999999999999999877 78899999987643 3445678899999998 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +...+++|||+++++|.+++...........  ..+...+|.++|..++   +|+||+|+||.
T Consensus        88 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i---~H~dL~p~Nil  147 (297)
T cd06656          88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQV---IHRDIKSDNIL  147 (297)
T ss_pred             CCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            7899999999999999999864433433322  2266778999999998   99999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=3.3e-18  Score=135.98  Aligned_cols=120  Identities=13%  Similarity=0.210  Sum_probs=99.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|++++.||+|+||.||++.+.. ++..+|+|....     ..+.+|+.+++.+ +||||+++++.+..    ....++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~-~~~~vaiK~~~~-----~~~~~E~~il~~l-~HpnIv~~~~~~~~----~~~~~l  160 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNK-TCEHVVIKAGQR-----GGTATEAHILRAI-NHPSIIQLKGTFTY----NKFTCL  160 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECC-CCCEEEEechhh-----hhhHHHHHHHHhC-CCCCCCCEeEEEEE----CCeeEE
Confidence            579999999999999999999988 888999996432     3467899999999 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|++. ++|..++. ..........  ..+++.+|+|+|..++   |||||||+||.
T Consensus       161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~I---vHrDiKP~NIl  214 (391)
T PHA03212        161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRI---IHRDIKAENIF  214 (391)
T ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHhEE
Confidence            999996 78888875 3333333322  2377788999999998   99999999984

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.78  E-value=5.7e-18  Score=130.33  Aligned_cols=125  Identities=18%  Similarity=0.257  Sum_probs=103.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|++.+.||+|+||.||++.+.. ++..+++|.+...  ......+.+|+.++..+ +|+||+++++.+..    .+.++
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~   75 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRP-SGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYS----DGEIS   75 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcC-CCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEee----CCEEE
Confidence            58999999999999999999887 7888999988754  23455688999999999 99999999999988    88999


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|.+++. .........  ...++..+|.|+|. .++   +|+|++|+||.
T Consensus        76 lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i---~H~dl~p~nil  132 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKI---MHRDVKPSNIL  132 (308)
T ss_pred             EEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE---EECCCChHHEE
Confidence            9999999999999986 333333322  23367778999997 577   99999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0589|consensus

Probab=99.78  E-value=3.3e-19  Score=140.12  Aligned_cols=126  Identities=16%  Similarity=0.213  Sum_probs=105.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|..++.+|+|+||.++.+..+. .+..+++|.++..   .........|+.+++.+ .||||+.+.+.|..    .+.
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~-~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~----~~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKS-DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEE----DGQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhcc-CCceEEEEEEeccccCchhhHHHHHHHHHHHhc-cCCCeeeeccchhc----CCc
Confidence            569999999999999999999887 6778999999864   34555789999999998 99999999999998    455


Q ss_pred             -EEEEEecCCCCChhhhcCCC---CCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 -IWFVMQREAEMPPPRALKPD---ELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 -~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ++|+|+|++||++.+.|...   ..+......+  +.+.++.|+|..+|   +|||+|..||.
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i---LHRDlK~~Nif  138 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV---LHRDLKCANIF  138 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh---hcccchhhhhh
Confidence             99999999999999999722   2333222222  88889999999999   99999999985

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.78  E-value=2e-18  Score=134.88  Aligned_cols=96  Identities=21%  Similarity=0.243  Sum_probs=78.4

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEec-----CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDT-----QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      |..+.++|.+.+.||+|+||.||+|.+.     . .+..+|+|.++..  ......+..|+.++..+.+|+||+++++.+
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA-TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   80 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccc-cceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence            3445678999999999999999999853     2 3568999998753  234567889999999986789999999987


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      ...   +..++++|||+++|+|.+++.
T Consensus        81 ~~~---~~~~~lv~ey~~~g~L~~~i~  104 (343)
T cd05103          81 TKP---GGPLMVIVEFCKFGNLSNYLR  104 (343)
T ss_pred             ecC---CCceEEEEeccCCCcHHHHHH
Confidence            653   567899999999999999885

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0667|consensus

Probab=99.78  E-value=1.6e-18  Score=139.81  Aligned_cols=125  Identities=24%  Similarity=0.313  Sum_probs=108.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-----CCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-----SNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-----~niv~~~~~~~~~~~~~~  115 (176)
                      +|.+++.||+|+||+|.+|.+.. +++.||||+++-.+.+..+...|+.++..+..|     -|+|+++++|.-    .+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~-T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f----r~  261 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHK-TGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF----RN  261 (586)
T ss_pred             EEEEEEEecccccceeEEEEecC-CCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----cc
Confidence            67889999999999999999998 999999999998888888889999999998534     399999999998    89


Q ss_pred             eEEEEEecCCCCChhhhcCC---CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP---DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+|.+. -+|.++|+.   ..+.+...+..  +++.+|..||..+|   ||.||||+||.
T Consensus       262 HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~I---IHcDLKPENIL  321 (586)
T KOG0667|consen  262 HLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGI---IHCDLKPENIL  321 (586)
T ss_pred             ceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCChhhee
Confidence            9999999886 799999983   23344333333  78889999999999   99999999985

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.78  E-value=3.8e-18  Score=128.22  Aligned_cols=126  Identities=14%  Similarity=0.241  Sum_probs=105.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|.+.+.||+|+||.||++.+.. .+..+++|.+.........+.+|+.+++.+ +|+|++++++.+..    .+.+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~l   79 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR----EPPFYI   79 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEec-CCceEEEEEecCCchHHHHHHHHHHHHHhC-CCCChhheEEEEcC----CCCcEE
Confidence            458999999999999999999987 788999999876554566789999999998 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcCC-C--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP-D--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~-~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.+++.. .  ..+.....  ..+...+|+++|..++   +|+|++|+||.
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~nil  136 (263)
T cd05052          80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCL  136 (263)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccCcceEE
Confidence            9999999999999862 1  23332222  2367778999999988   99999999974

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.78  E-value=2.7e-18  Score=133.11  Aligned_cols=122  Identities=19%  Similarity=0.240  Sum_probs=100.1

Q ss_pred             EeeEEeec--CCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          44 LGYVIGSG--VCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        44 ~~~~lg~G--~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +++.||+|  +|+.||++.+.. ++..+|+|.+...   ......+..|+.+++.+ +||||+++++.+..    .+..+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~----~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKP-TGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIA----DNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeecc-cCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEE----CCEEE
Confidence            45789999  678999999988 8899999998764   23445678899999998 99999999999998    78999


Q ss_pred             EEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+++|+|.+++..   ...+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---iH~dlkp~Nil  133 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY---VHRSVKASHIL  133 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCChhhEE
Confidence            99999999999999852   223333222  2367788999999998   99999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.78  E-value=3.2e-18  Score=132.25  Aligned_cols=120  Identities=16%  Similarity=0.195  Sum_probs=97.3

Q ss_pred             eEEeecCCeeEEEEEec---CCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          46 YVIGSGVCADVYEALDT---QNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~---~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      +.||+|+||.||.+.+.   . .+..+|+|.+....   .....+..|+.++..+ +|+||+++++.+..    .+.+|+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPD-AGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQT----EGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEc----CCEEEE
Confidence            57999999999998763   3 56789999987532   2344567899999999 99999999999988    789999


Q ss_pred             EEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.+++. ....+....  ...++..+|+|+|..++   +|+||+|+||.
T Consensus        76 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  130 (318)
T cd05582          76 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI---IYRDLKPENIL  130 (318)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHeE
Confidence            999999999999986 333343332  23377888999999998   99999999974

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.78  E-value=3.3e-18  Score=132.55  Aligned_cols=121  Identities=18%  Similarity=0.239  Sum_probs=97.2

Q ss_pred             eEEeecCCeeEEEEEecC--CCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          46 YVIGSGVCADVYEALDTQ--NGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~--~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +.||+|+||.||++....  ..+..+|+|.+....     .....+..|+.++..+ +|+||+++++.+..    .+.+|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~----~~~~~   76 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQT----GGKLY   76 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEec----CCeEE
Confidence            679999999999998632  146789999987532     2344578899999999 99999999999988    78899


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|.+++. .........  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  132 (323)
T cd05584          77 LILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI---IYRDLKPENIL  132 (323)
T ss_pred             EEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence            9999999999999986 333333222  23377788999999998   99999999984

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.78  E-value=3.9e-18  Score=127.40  Aligned_cols=124  Identities=22%  Similarity=0.337  Sum_probs=104.2

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      |++.+.||+|+||.||++.... .+..+|+|.+.....   .......|+.++..+ +|+||+++.+.+..    ...++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~----~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK-NGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQD----DNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT-TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEE----SSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECC-CCeEEEEEEeccccccccccchhhhhhhccccc-cccccccccccccc----ccccc
Confidence            7899999999999999999988 888999999988643   222345699999999 99999999999998    78999


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|.+++. ....+.....  ..+...+|+++|..++   +|+||+|+||.
T Consensus        75 ~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i---~H~dikp~NIl  130 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGI---VHRDIKPENIL  130 (260)
T ss_dssp             EEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTE---EESSBSGGGEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccc
Confidence            9999999999999996 4444443332  2277778999999988   99999999984

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0612|consensus

Probab=99.78  E-value=5.1e-20  Score=155.83  Aligned_cols=129  Identities=17%  Similarity=0.081  Sum_probs=108.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh----hHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~----~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      -..+.|.+++.||+|+||.|..+..+. ++..+|+|.++.+..    ...-|..|-.+|... +.+||++++-.|.+   
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~-t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD---  146 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKS-TEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQD---  146 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeec-cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcC---
Confidence            344679999999999999999999988 899999999988532    344577788888886 89999999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC-CCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD-ELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ..++|+||||++||+|..++... ..+..=.+++  ...++|..+|..|.   ||||+|||||.
T Consensus       147 -~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgy---VHRDiKPDNvL  207 (1317)
T KOG0612|consen  147 -ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGY---VHRDIKPDNVL  207 (1317)
T ss_pred             -ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccc---eeccCCcceeE
Confidence             89999999999999999998732 2444334444  77789999999999   99999999984

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.78  E-value=7.1e-18  Score=143.91  Aligned_cols=126  Identities=21%  Similarity=0.307  Sum_probs=103.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+|.+.+.||+|+||.||+|.+.. ++..+|+|.++..    ......+.+|+.+++.+ +||||+++++.+..    .+
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~-tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d----~~   75 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPV-CSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSD----GD   75 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECC-CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEee----CC
Confidence            469999999999999999999987 7889999998753    22355789999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC----CC--------CChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP----DE--------LDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~----~~--------~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||++||+|.+++..    ..        .....  ....++..+|+|+|..|+   +||||||+||.
T Consensus        76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI---IHRDLKPeNIL  145 (932)
T PRK13184         76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV---LHRDLKPDNIL  145 (932)
T ss_pred             EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc---cccCCchheEE
Confidence            89999999999999998751    11        11111  122366778999999998   99999999984

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.77  E-value=3.2e-18  Score=132.39  Aligned_cols=121  Identities=18%  Similarity=0.245  Sum_probs=98.6

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+|+||+++++.+..    .+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~----~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG-TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT----KDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc----CCEEEEEE
Confidence            368999999999999987 78899999987532    2344567888888877679999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ....+.....  ..+.+.+|+|+|..++   +|+||+|+||-
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~Nil  128 (318)
T cd05570          76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI---IYRDLKLDNVL  128 (318)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EccCCCHHHeE
Confidence            9999999998886 3234443322  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=8e-18  Score=144.35  Aligned_cols=135  Identities=16%  Similarity=0.209  Sum_probs=107.2

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ......|.+++.||+|+||.||++.+.. .+..+++|.+...   ......+..|+.++..+ .||||+++++.|.... 
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~-tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~-   85 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKR-TQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKA-   85 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECC-CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecC-
Confidence            4445679999999999999999999987 7889999998753   33456788999999999 9999999999886521 


Q ss_pred             CcceEEEEEecCCCCChhhhcCC-----CCCChhhHh--hhhhHHHHHHHHhcCC----CccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP-----DELDLDNLQ--DCGDRYELGYVIGSGV----CADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~--~~~~~~~l~~lh~~~i----~~~v~~~~~~~nv~  174 (176)
                       ...+||||||+++|+|.++|..     ..++.....  ..+++.+|.|||..+.    ..+||+||||+||.
T Consensus        86 -~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL  157 (1021)
T PTZ00266         86 -NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF  157 (1021)
T ss_pred             -CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence             4679999999999999998852     233433322  2377888999998651    23599999999984

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.77  E-value=8e-18  Score=128.30  Aligned_cols=126  Identities=17%  Similarity=0.304  Sum_probs=105.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|++.+.||+|+||.||.+.+.. .+..+++|.+....    .....+.+|+.+++.+ +|+|++++++.+..    .+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   74 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG-SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQD----DS   74 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEc----CC
Confidence            358999999999999999999987 78899999987532    3456688999999999 89999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++++|.+++. ...........  .+.+.+|.++|..|+   +|+||+|+||.
T Consensus        75 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i---~H~dl~p~nil  133 (290)
T cd05580          75 NLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDI---VYRDLKPENLL  133 (290)
T ss_pred             eEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEE
Confidence            8999999999999999986 33334333222  367788999999988   99999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.77  E-value=5e-18  Score=130.58  Aligned_cols=125  Identities=18%  Similarity=0.205  Sum_probs=101.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|.+.+.||+|+||.||++.+.. .+..+|+|.++...  .....+.+|+.+++.+ +|+|++++++.+..    .+..
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~   79 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKL-TENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHT----DKSL   79 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecC-CCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEee----CCeE
Confidence            469999999999999999999987 78899999987542  2334577899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++ ++|.+++.  ..........  ..+...+|+|+|..|+   +|+|++|+||-
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---vH~dlkp~Nil  136 (309)
T cd07872          80 TLVFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV---LHRDLKPQNLL  136 (309)
T ss_pred             EEEEeCCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            99999998 48888775  2223333322  2377788999999998   99999999983

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.77  E-value=6.4e-18  Score=126.77  Aligned_cols=127  Identities=18%  Similarity=0.226  Sum_probs=104.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..+.|++.+.||+|++|.||++.+..  +..+++|.+.........+.+|+.+++.+ +|+|++++++.+..    .+..
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   76 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN--TTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQLYAVCTL----EEPI   76 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC--CeEEEEEeeCCCcccHHHHHHHHHHHHHC-CCCCccceeEEEec----CCCe
Confidence            34679999999999999999998754  56799999876544456788999999999 99999999999888    7889


Q ss_pred             EEEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++...   ..+....  ...+...++.++|..|+   +|+|++|+||.
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~Nil  135 (261)
T cd05068          77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY---IHRDLAARNVL  135 (261)
T ss_pred             eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCCcceEE
Confidence            9999999999999998632   2333332  22266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.77  E-value=4.3e-18  Score=131.73  Aligned_cols=120  Identities=18%  Similarity=0.234  Sum_probs=95.2

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHH-HHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYR-MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~-~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+....    .....+..|.. +++.+ +|+||+++++.+..    .+.+|+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~----~~~~~lv   74 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKS-DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQT----AEKLYFV   74 (321)
T ss_pred             CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEc----CCEEEEE
Confidence            368999999999999987 78899999987532    22344555554 56667 99999999999988    7899999


Q ss_pred             EecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+.+. .........  ...+++.+|+|+|..++   +|+||||+||.
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---vH~Dlkp~NIl  128 (321)
T cd05603          75 LDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI---IYRDLKPENIL  128 (321)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeE
Confidence            99999999988886 333333332  23377888999999998   99999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.77  E-value=4.7e-18  Score=131.63  Aligned_cols=120  Identities=18%  Similarity=0.262  Sum_probs=95.4

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHH-HHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYR-MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~-~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||++.+.. ++..+|+|.+....    .....+..|.. +++.+ +|+||+++++.+..    .+.+++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~----~~~~~lv   74 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKA-DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQT----ADKLYFV   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEe----CCEEEEE
Confidence            468999999999999987 78999999987532    22344555555 45666 99999999999988    7899999


Q ss_pred             EecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++. ..........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi---vH~dikp~NIl  128 (323)
T cd05575          75 LDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNI---IYRDLKPENIL  128 (323)
T ss_pred             EcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHeE
Confidence            99999999999886 3333333322  2377888999999998   99999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.77  E-value=4.9e-18  Score=131.09  Aligned_cols=125  Identities=18%  Similarity=0.212  Sum_probs=100.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+|++.+.||+|+||.||+|.+.. .+.    .+|+|.+...  ......+..|+.+++.+ .|+||+++++.+..    
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~----   80 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLT----   80 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEec-CCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcC----
Confidence            469999999999999999998754 443    4899988653  34566788999999999 99999999998876    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++||+++|+|.+++...  ..+.....  ..+++.+|+|+|..++   +|+||||+||.
T Consensus        81 -~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---iH~dlkp~Nil  141 (316)
T cd05108          81 -STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL---VHRDLAARNVL  141 (316)
T ss_pred             -CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe---eccccchhheE
Confidence             4578999999999999998732  23332222  2377788999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.77  E-value=4e-18  Score=127.81  Aligned_cols=127  Identities=16%  Similarity=0.235  Sum_probs=102.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.+.|++.+.||+|+||.||++....  +..+++|.+.........+.+|+.+++.+ +|+|++.+++.+..     ..
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~--~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-----~~   74 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNG--HTKVAIKSLKQGSMSPEAFLAEANLMKQL-QHPRLVRLYAVVTQ-----EP   74 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCC--CceEEEEEecCCCCcHHHHHHHHHHHHhc-CCcCeeeEEEEEcc-----CC
Confidence            455679999999999999999998654  57899999886554556789999999999 99999999988643     66


Q ss_pred             EEEEEecCCCCChhhhcCC-C--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-D--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++.. .  ..+.....  ..+...+|+|+|..|+   +|+|++|+||.
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i---~H~dl~p~ni~  134 (260)
T cd05067          75 IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY---IHRDLRAANIL  134 (260)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe---ecccccHHhEE
Confidence            8999999999999999862 1  22332222  2367778999999988   99999999974

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.77  E-value=6e-18  Score=127.39  Aligned_cols=126  Identities=20%  Similarity=0.211  Sum_probs=101.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+|++.+.||+|+||.||+|.+.. .+   ..+++|.+...  ......+..|+.++..+ +|||++++++.+..    .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   77 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKL-PGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTK----S   77 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEec-CCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec----C
Confidence            468999999999999999998754 33   37899988653  33456789999999998 99999999999987    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++++|||+++|+|.+++..  ........  ...+...+|+++|..++   +|+|++|+||.
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~h~dlkp~nil  138 (267)
T cd05066          78 KPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNIL  138 (267)
T ss_pred             CccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eehhhchhcEE
Confidence            889999999999999999863  22333222  22366778999999998   99999999983

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0658|consensus

Probab=99.77  E-value=4.7e-19  Score=134.69  Aligned_cols=125  Identities=22%  Similarity=0.302  Sum_probs=98.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC-cceEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT-HSEIWF  119 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~-~~~~~l  119 (176)
                      .|...+.+|+|+||.||++.... +++.+|||..-...++   --+|+.+|+.+ +||||+++.-+|.....+ .-.+.+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e-~~~~vAIKKv~~d~r~---knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRE-TEEEVAIKKVLQDKRY---KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcC-CCceeEEEEecCCCCc---CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHHHH
Confidence            57888999999999999999988 8899999987665432   24588889988 999999999888764422 225678


Q ss_pred             EEecCCCCChhhhcC-----CCCCCh--hhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALK-----PDELDL--DNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~-----~~~~~~--~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||+| .+|.+.++     ....+.  -.++.+|..-+|+|||..||   |||||||+|+.
T Consensus       100 VleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~I---cHRDIKPqNlL  157 (364)
T KOG0658|consen  100 VLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGI---CHRDIKPQNLL  157 (364)
T ss_pred             HHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCc---ccCCCChheEE
Confidence            999998 68888886     122222  12355588889999999998   99999999984

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.77  E-value=5.1e-18  Score=131.57  Aligned_cols=120  Identities=19%  Similarity=0.236  Sum_probs=95.2

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHH-HHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRM-LRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~-~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||.+.+.. .+..+|+|.+....    .....+..|..+ ++.+ +|+||+++++.+..    .+.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~----~~~~~lv   74 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKL-DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQT----TEKLYFV   74 (325)
T ss_pred             CceeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEec----CCEEEEE
Confidence            368999999999999987 78899999987531    233445556554 5566 99999999999988    7899999


Q ss_pred             EecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++. .........  ...+++.+|+|+|..|+   +|+||||+||.
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi---vH~Dlkp~NIl  128 (325)
T cd05604          75 LDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI---VYRDLKPENIL  128 (325)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeE
Confidence            99999999998886 333333332  23377888999999998   99999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.77  E-value=6e-18  Score=131.15  Aligned_cols=120  Identities=19%  Similarity=0.240  Sum_probs=94.4

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHH-HHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYR-MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~-~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||++.+.. .+..+|+|.+....    .....+..|.. +++.+ +|+||+++++.+..    .+.+|++
T Consensus         1 ~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~----~~~~~lv   74 (325)
T cd05602           1 KVIGKGSFGKVLLARHKA-EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQT----ADKLYFV   74 (325)
T ss_pred             CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEc----CCeEEEE
Confidence            368999999999999987 77899999987532    22234445544 45666 99999999999988    7889999


Q ss_pred             EecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++. ..........  ..+.+.+|.|+|..|+   +|+||||+||.
T Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi---iHrDlkp~Nil  128 (325)
T cd05602          75 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI---VYRDLKPENIL  128 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeE
Confidence            99999999999986 2333333322  2377888999999998   99999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG4279|consensus

Probab=99.77  E-value=9.5e-19  Score=142.76  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=103.1

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecC
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQRE  124 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~  124 (176)
                      -+||+|+||.||.|.++. +....|||.++.. +.+.+.+..|+.+++.+ +|.|||++.|++..    ++++-|.||-+
T Consensus       581 vVLGKGTYG~VYA~RD~~-tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~se----nGf~kIFMEqV  654 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMD-TQVRIAIKEIPEKDSREVQPLHEEIALHSTL-RHKNIVRYLGSVSE----NGFFKIFMEQV  654 (1226)
T ss_pred             EEeecCceeEEEeecccc-ceeEEEeeecccccchhhccHHHHHHHHHHH-hhHhHHHHhhccCC----CCeEEEEeecC
Confidence            478999999999999988 7788999999864 45777889999999999 99999999999988    88999999999


Q ss_pred             CCCChhhhcCC---CCCChhhH---hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         125 AEMPPPRALKP---DELDLDNL---QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       125 ~~g~L~~~l~~---~~~~~~~~---~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||+|.++|+.   .+.+...+   +-.+++.+|+|+|.+.|   ||||||.|||.
T Consensus       655 PGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~I---VHRDIKGDNVL  707 (1226)
T KOG4279|consen  655 PGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKI---VHRDIKGDNVL  707 (1226)
T ss_pred             CCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcce---eeccccCCcEE
Confidence            99999999973   22232222   33388999999999999   99999999995

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.77  E-value=6.1e-18  Score=126.18  Aligned_cols=120  Identities=20%  Similarity=0.282  Sum_probs=98.9

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      +.||+|+||.||.+.+.. .+..+++|.+...  ......+..|+.+++.+ +|+|++++++.+..    ....+++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~   74 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRA-DNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQ----KQPIYIVMEL   74 (252)
T ss_pred             CccCcccCccEEEEEEec-CCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC----CCCeEEEEee
Confidence            368999999999999987 7889999987643  33456789999999999 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++..  ...+.....  ..+...+|.|+|..++   +|+|++|+||.
T Consensus        75 ~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dl~p~nil  126 (252)
T cd05084          75 VQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC---IHRDLAARNCL  126 (252)
T ss_pred             ccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccchheEE
Confidence            999999999863  223333322  2366778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG4717|consensus

Probab=99.77  E-value=5.7e-19  Score=139.95  Aligned_cols=130  Identities=19%  Similarity=0.193  Sum_probs=111.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..+..-|.+.+.||+|.|..|.++.+-= +|+.||+|++.+.+.   ....+..|+.+|+.+ +|||||+++...-+   
T Consensus        14 gkIAGLYDLekTlG~GHFAVVKLArHVF-TGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-QHpNiVRLYEViDT---   88 (864)
T KOG4717|consen   14 GKIAGLYDLEKTLGRGHFAVVKLARHVF-TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-QHPNIVRLYEVIDT---   88 (864)
T ss_pred             cceeeeehhhhhhcCCceehhhhhhhhc-ccceeEEEEecccccchhhhhHHHHHHHHHHHh-cCcCeeeeeehhcc---
Confidence            3445568999999999999999998877 899999999998652   456788999999998 99999999999877   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CC--CCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PD--ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~--~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +..+|||+|+=++|+|+|||-  ..  .+++..-+++|+.-++.|+|..++   |||||||+||.
T Consensus        89 -QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHV---VHRDLKPENVV  150 (864)
T KOG4717|consen   89 -QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHV---VHRDLKPENVV  150 (864)
T ss_pred             -cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhh---hcccCCcceeE
Confidence             888999999999999999985  22  234545567799999999999999   99999999995

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.77  E-value=7.9e-18  Score=128.36  Aligned_cols=131  Identities=18%  Similarity=0.236  Sum_probs=108.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +-.+.+.|++++.||.|+||.||++.+.. .+..+++|.+.... .....+..|+.+++.+ +|+|++++++.+..    
T Consensus         7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   80 (292)
T cd06644           7 DLDPNEVWEIIGELGDGAFGKVYKAKNKE-TGALAAAKVIETKSEEELEDYMVEIEILATC-NHPYIVKLLGAFYW----   80 (292)
T ss_pred             ccCcchhhhhhheecCCCCeEEEEEEECC-CCceEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEe----
Confidence            34566789999999999999999999987 78899999987643 4567788999999998 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.++++|||+++++|..++.  .........  ...+...+|.++|..++   +|+|++|+||.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~Nil  142 (292)
T cd06644          81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI---IHRDLKAGNVL  142 (292)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe---eecCCCcceEE
Confidence            789999999999999988775  222333322  22366778999999988   99999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.77  E-value=1.4e-17  Score=124.91  Aligned_cols=127  Identities=17%  Similarity=0.233  Sum_probs=103.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.++|.+.+.||+|+||.||.+.+..  +..+++|.+.........+.+|+.+++.+ +|+|++++++.+..     ..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~--~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-----~~   74 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-----EP   74 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecC--CccEEEEecCCChhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-----CC
Confidence            456789999999999999999998643  55799998876655566788999999998 99999999988765     56


Q ss_pred             EEEEEecCCCCChhhhcCC-C--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-D--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++|+|.+++.. .  ..+....  ...+...+|.++|..++   +|+||+|+||.
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~ni~  134 (260)
T cd05073          75 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANIL  134 (260)
T ss_pred             eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc---cccccCcceEE
Confidence            8999999999999999862 1  2233222  22367788999999988   99999999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0574|consensus

Probab=99.76  E-value=3.3e-20  Score=138.71  Aligned_cols=128  Identities=16%  Similarity=0.318  Sum_probs=108.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.+.|.++.+||+|+||.||++.++. .|..+|+|.++... +.+++..|+.+|..+ ++++||+++|.|-.    ...
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~E-sG~v~AIK~VPV~s-DLQEIIKEISIMQQC-~S~yVVKYYGSYFK----~sD  102 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRE-SGHVLAIKKVPVDT-DLQEIIKEISIMQQC-KSKYVVKYYGSYFK----HSD  102 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhc-cCcEEEEEecCccc-hHHHHHHHHHHHHHc-CCchhhhhhhhhcc----CCc
Confidence            344568899999999999999999988 89999999988765 467899999999998 99999999999987    788


Q ss_pred             EEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+|||||.-|++.|+++  ...+..+..  .....+.+|+|||....   ||||+|.+||.
T Consensus       103 LWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~K---IHRDIKAGNIL  161 (502)
T KOG0574|consen  103 LWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK---IHRDIKAGNIL  161 (502)
T ss_pred             eEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHH---HHhhcccccEE
Confidence            999999999999999998  333333332  22255678999998888   99999999984

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.76  E-value=1.1e-17  Score=126.89  Aligned_cols=128  Identities=20%  Similarity=0.232  Sum_probs=101.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEe----cCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALD----TQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+|++.+.||+|+||.||.+..    .. .+..+++|.+.... .....+.+|+.++..+ +|+|++++++.+....  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~--~   79 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDN-TGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG--R   79 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCC-CCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCC--C
Confidence            4689999999999999999974    23 46789999987643 3456789999999999 9999999998875421  4


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||+++|+|.+++..  ...+....  ...+...+|+|+|..|+   +|+|++|+||.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i---~H~dlkp~nil  140 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY---VHRDLATRNIL  140 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCCHhhEE
Confidence            568999999999999999862  22333322  22367778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.76  E-value=8.6e-18  Score=127.26  Aligned_cols=127  Identities=19%  Similarity=0.360  Sum_probs=106.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...|+..+.||.|+||.||.+.+.. .+..+++|.+...  ......+.+|+.+++.+ .|+|++++++.+..    .+.
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   76 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNR-TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLK----GTK   76 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEcc-CCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEE----CCE
Confidence            3458888999999999999999877 7889999998754  33456788999999998 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++|+|.+++..........  ...+...+|+++|..++   +|+||+|+||-
T Consensus        77 ~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~i---vH~dl~p~Nil  133 (277)
T cd06640          77 LWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVL  133 (277)
T ss_pred             EEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCcCCChhhEE
Confidence            999999999999999987544443332  22366778999999998   99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.76  E-value=1.1e-17  Score=126.08  Aligned_cols=126  Identities=18%  Similarity=0.186  Sum_probs=102.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+|++.+.||+|+||.||+|.... .+   ..+++|.+...  ......+..|+.+++.+ .|+|++++.+.+..    .
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~----~   77 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTK----S   77 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEec-CCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECC----C
Confidence            458999999999999999998865 44   36999998753  33566789999999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++|+|.+++..  ..........  .+...+|+++|..|+   +|+|++|+||-
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~---~H~dl~p~nil  138 (269)
T cd05065          78 RPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY---VHRDLAARNIL  138 (269)
T ss_pred             CceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccChheEE
Confidence            889999999999999999862  2333333222  266778999999988   99999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.76  E-value=7.4e-18  Score=126.30  Aligned_cols=125  Identities=17%  Similarity=0.171  Sum_probs=102.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|++.+.||+|+||.||.+.+..  +..+|+|.+.........+.+|+.++..+ +|||++++++.+..    ...+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~--~~~~aik~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~l   76 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMSEDEFIEEAKVMMKL-SHEKLVQLYGVCTK----QRPIYI   76 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC--CCcEEEEEcCCCcccHHHHHHHHHHHhcC-CCCCeeeEEEEEcc----CCCcEE
Confidence            358999999999999999998754  44699998876543446789999999999 99999999999987    678999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.+++..  ........  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~nil  132 (256)
T cd05113          77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF---IHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccCcceEE
Confidence            9999999999999862  22333322  23377788999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.76  E-value=6.5e-18  Score=128.32  Aligned_cols=118  Identities=14%  Similarity=0.089  Sum_probs=95.6

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||+|+||.||.+.+.. ++..+|+|.+....    .....+..|+.+++.+ +|+|++.+.+.+..    ...++++|||
T Consensus         1 lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~----~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRA-TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQT----KTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEcc-CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcC----CCeEEEEEeC
Confidence            6899999999999987 78899999987532    1234567899999999 99999999999988    7889999999


Q ss_pred             CCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+.+.     ....+....  ...+.+.+|+|+|..++   +|+||+|+||.
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  129 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI---IYRDLKPENVL  129 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            99999987763     122333332  22367788999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG1989|consensus

Probab=99.76  E-value=6.1e-18  Score=140.17  Aligned_cols=140  Identities=19%  Similarity=0.204  Sum_probs=109.9

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec-ChhhHHHHHHHHHHHHhccCCCCcceecee-EEec
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI-NPEFIDDIKEEYRMLRDLSQHSNIPDFFGA-YMKK  110 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~-~~~~~~~~~~e~~~~~~l~~h~niv~~~~~-~~~~  110 (176)
                      ..+..-.-++++.+.|.+|+|+.||.+.+.. .+..+|+|.+-. .......+.+|+.+|+.|.+|+|||.|++. ....
T Consensus        30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~-~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~  108 (738)
T KOG1989|consen   30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVK-GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR  108 (738)
T ss_pred             eEEEECCEEEEEEEEEccCCcEEEEEEEecC-CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc
Confidence            4444555578888999999999999999987 668899987655 455788899999999999889999999994 3332


Q ss_pred             c-CC-cceEEEEEecCCCCChhhhcC---CCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 H-QT-HSEIWFVMQREAEMPPPRALK---PDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~-~~-~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      . +. .-+++|.||||+||+|.|++.   ...+.+.+  ..+++...+++++|.+. ..+||||||=+||.
T Consensus       109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvL  178 (738)
T KOG1989|consen  109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVL  178 (738)
T ss_pred             cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheE
Confidence            2 22 467999999999999999986   23333333  34558889999999777 12499999999985

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.76  E-value=3.2e-17  Score=122.48  Aligned_cols=125  Identities=15%  Similarity=0.232  Sum_probs=103.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +|.+.+.||+|+||.||.+.+.. ++..+++|.++..  ......+..|+.+++.+ +|+|++++.+.+..    ...++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~   74 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN-SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEA----DGHLY   74 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC-CCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEE----CCEEE
Confidence            48899999999999999999987 7889999998653  23456778899999998 99999999999998    78999


Q ss_pred             EEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|.+++..   .....+...  ..+...+|.++|..++   +|+|++|+||.
T Consensus        75 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~dl~p~nil  132 (255)
T cd08219          75 IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV---LHRDIKSKNIF  132 (255)
T ss_pred             EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCcceEE
Confidence            99999999999998852   223333222  2367778999999998   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.76  E-value=1.8e-17  Score=124.56  Aligned_cols=126  Identities=17%  Similarity=0.244  Sum_probs=103.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++.+.||+|+||.||++.+.. ++..+++|.+...    ......+..|+.+++.+ +|+|++++++.+..    .+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   75 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLL-DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIE----DN   75 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeC-CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEE----CC
Confidence            469999999999999999999987 7889999987642    23445688899999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++||+++|+|.+++.     ....+....  ...+...+|+|+|..++   +|+|++|+||.
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~~~nil  138 (267)
T cd08228          76 ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV---MHRDIKPANVF  138 (267)
T ss_pred             eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe---eCCCCCHHHEE
Confidence            8999999999999998874     122233222  22367778999999998   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.5e-17  Score=124.52  Aligned_cols=128  Identities=16%  Similarity=0.235  Sum_probs=105.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      -..++|.+.+.||+|+||.||++.+..  +..+++|.+.........+..|+.+++.+ +|+|++++++.+..    ...
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~--~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   75 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNG--TTKVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKLVQLYAVCSE----EEP   75 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcC--CceEEEEEecCCccCHHHHHHHHHHHhhC-CCCCEeeeeeeeec----CCc
Confidence            345679999999999999999998754  46799999886554556789999999999 99999999999887    788


Q ss_pred             EEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++++|.+++...   ........  ..+...++.|+|..++   +|+|++|+||.
T Consensus        76 ~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i---~h~di~p~nil  135 (261)
T cd05034          76 IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY---IHRDLAARNIL  135 (261)
T ss_pred             eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcchheEE
Confidence            99999999999999998632   23333322  2366778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.76  E-value=9.2e-18  Score=127.09  Aligned_cols=127  Identities=21%  Similarity=0.406  Sum_probs=105.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.|+..+.||+|+||.||++.+.. .+..+|+|.+...  ......+.+|+.++..+ +|+|++++++.+..    ...
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~   76 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLK----DTK   76 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECC-CCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEe----CCe
Confidence            3568889999999999999999876 6789999987653  23456788999999998 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++|+|.+++.....+.....  ..+...++.++|..++   +|+|++|+||-
T Consensus        77 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~Ni~  133 (277)
T cd06641          77 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVL  133 (277)
T ss_pred             EEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCe---ecCCCCHHhEE
Confidence            9999999999999999875444443332  2366678999999988   99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG4236|consensus

Probab=99.76  E-value=2.1e-18  Score=137.07  Aligned_cols=129  Identities=20%  Similarity=0.230  Sum_probs=105.1

Q ss_pred             CCCCCeEEe--eEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          37 DCGDRYELG--YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        37 ~~~~~~~~~--~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ++..-|++.  +.||+|.||.||-|..+. +|+.||+|+|.+.   .+......+|+.++..+ +||.|+++-..|++  
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRk-tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET--  634 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRK-TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFET--  634 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecc-cCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecC--
Confidence            444456655  899999999999999998 9999999999863   23446789999999999 99999999999999  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+++|||-+.|..|.-+|..  +.+....+.+.  |++.+|+|||.++|   ||.||||+||.
T Consensus       635 --~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI---vHCDLKPENVL  696 (888)
T KOG4236|consen  635 --PERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI---VHCDLKPENVL  696 (888)
T ss_pred             --CceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce---eeccCCchhee
Confidence              7999999999976555555553  33333333333  88889999999999   99999999995

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=1.1e-17  Score=126.89  Aligned_cols=124  Identities=16%  Similarity=0.184  Sum_probs=101.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|++.+.||+|+||.||++.+.. ++..+++|.+...  ......+.+|+.++..+ +|+|++++++.+..    .+..+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~   75 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLL-TRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFV----ENRIS   75 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcC-CCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEE----CCEEE
Confidence            47888999999999999999887 7889999998754  33456788999999998 99999999999998    78899


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|..+... ..........+.+.+|+|+|..|+   +|+||+|+||-
T Consensus        76 lv~e~~~~~~l~~~~~~-~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  127 (279)
T cd06619          76 ICTEFMDGGSLDVYRKI-PEHVLGRIAVAVVKGLTYLWSLKI---LHRDVKPSNML  127 (279)
T ss_pred             EEEecCCCCChHHhhcC-CHHHHHHHHHHHHHHHHHHHHCCE---eeCCCCHHHEE
Confidence            99999999998765321 111111223477788999999998   99999999974

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.76  E-value=1.2e-17  Score=128.05  Aligned_cols=125  Identities=19%  Similarity=0.233  Sum_probs=102.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|.+.+.||+|+||.||++.+.. ++..+|+|.++...  .....+..|+.+++.+ +|+||+++++.+..    ...+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~----~~~~   79 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKL-TDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHT----EKSL   79 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcC-CCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEec----CCeE
Confidence            469999999999999999999987 78899999987542  2344577899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++ ++|.+++..  ...+.....  ..+...+|+++|..++   +|+||+|+||-
T Consensus        80 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---~H~dlkp~Nil  136 (301)
T cd07873          80 TLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV---LHRDLKPQNLL  136 (301)
T ss_pred             EEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCHHHEE
Confidence            99999997 688888752  233333322  2367788999999998   99999999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=2.7e-17  Score=125.28  Aligned_cols=141  Identities=21%  Similarity=0.394  Sum_probs=110.2

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +.+..+..+.++|.+.+.||+|+||.||++.... .+..+++|.+.........+..|+.++..+.+|+|++++++.+..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKK-DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            3456667778899999999999999999999987 788999999876543445677888888887689999999999875


Q ss_pred             cc-CCcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KH-QTHSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~-~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .. ......+++|||+++|+|.+++.     .........  ...+...+|+++|..++   +|+|++|+||-
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~nil  160 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI---IHRDVKGNNIL  160 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEE
Confidence            32 11356899999999999998874     122233222  22266778999999988   99999999973

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.76  E-value=1.2e-17  Score=127.19  Aligned_cols=124  Identities=13%  Similarity=0.078  Sum_probs=101.6

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      |+..+.||+|+||.||.+.+.. ++..+|+|.+....    .....+..|+.+++.+ +|++++.+.+.+..    .+.+
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~----~~~~   75 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYET----KDAL   75 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcC-CCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEec----CCEE
Confidence            7788899999999999999988 88899999887532    2234567899999998 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC---CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK---PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++.   ..........  ..+...+|.|+|..++   +|+|++|+||.
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---iH~dikp~Nil  134 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI---VYRDLKPENIL  134 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCCCHHHEE
Confidence            99999999999998885   1223333322  2367778999999988   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.76  E-value=1.1e-17  Score=125.74  Aligned_cols=126  Identities=18%  Similarity=0.223  Sum_probs=100.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +..+|++.+.||+|+||.||++.+.. . ..+++|.+.........+.+|+.++..+ +|+|++++++.+..     ...
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~-~~valK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-----~~~   75 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNG-T-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-----EPI   75 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecC-C-ceEEEEecccCccCHHHHHHHHHHHHhC-CCCCcceEEEEECC-----CCc
Confidence            44679999999999999999998765 3 4699999876433345688999999999 99999999987744     568


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++..   ...+.....  ..+...+|+++|..++   +|+|++|+||.
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~Nil  134 (262)
T cd05071          76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANIL  134 (262)
T ss_pred             EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccCcccEE
Confidence            999999999999999863   123333322  2366778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.2e-17  Score=122.66  Aligned_cols=128  Identities=28%  Similarity=0.449  Sum_probs=107.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.+.|.+.+.+|+|+||.||.+.... .+..+++|.+.... .....+..|+.+++.+ +|+|++++++.+..    ...
T Consensus         1 ~~~~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~~   74 (262)
T cd06613           1 PQEDYELIQRIGSGTYGDVYKARDIA-TGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLR----RDK   74 (262)
T ss_pred             CccceEEEEEecCCCceEEEEeEecC-CCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-CCCChhceEEEEEe----CCE
Confidence            34679999999999999999999877 77889999987643 3556789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|++|||+++++|.+++..  ...+.....  ..+...+|+|+|..++   +|+|++|+||.
T Consensus        75 ~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~ni~  133 (262)
T cd06613          75 LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK---IHRDIKGANIL  133 (262)
T ss_pred             EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc---eecCCChhhEE
Confidence            9999999999999998862  344443322  2266778999999998   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.76  E-value=1.7e-17  Score=126.38  Aligned_cols=124  Identities=13%  Similarity=0.071  Sum_probs=101.6

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      |+..+.||+|+||.||.+.+.. ++..+|+|.+....    .....+.+|+.++..+ +|++++.+.+.+..    ++.+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~----~~~~   75 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRA-TGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYET----KDAL   75 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECC-CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEec----CCEE
Confidence            7788999999999999999987 78899999987532    2234567899999998 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++..   ...+......  .+...+|.|+|..++   +|+|++|+||.
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i---iH~dikp~Nil  134 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT---VYRDLKPENIL  134 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCCHHHEE
Confidence            999999999999888752   1233333222  267778999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.76  E-value=2.2e-17  Score=126.79  Aligned_cols=125  Identities=18%  Similarity=0.214  Sum_probs=103.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+.+.||+|+||.||++.... .+..+++|.+....    .....+..|+.+++.+ +|+||+++++.+..    .+.
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~   75 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKE-TRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFET----KRH   75 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECC-CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEec----CCE
Confidence            58999999999999999999987 78899999887642    2345678899999998 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++++|.+++.. ........  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~NIl  133 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGI---VHRDLKPDNLL  133 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCchHHEE
Confidence            9999999999999999962 22332222  23366778999999998   99999999973

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.76  E-value=2e-17  Score=124.41  Aligned_cols=126  Identities=18%  Similarity=0.194  Sum_probs=102.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCC---CeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNG---NKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ++|++.+.||+|+||.||+|.+.. .   ...+++|.++..  ......+..|+.++..+ +|+|++++++.+..    .
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   77 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKL-PGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTK----S   77 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEcc-CCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEec----C
Confidence            468999999999999999998854 3   347899988754  23456788999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..+++|||+++|+|.+++..  ...+.....  ..+...+++|+|..++   +|+|++|+||.
T Consensus        78 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i---~H~di~p~nil  138 (266)
T cd05033          78 RPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY---VHRDLAARNIL  138 (266)
T ss_pred             CceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCcceEE
Confidence            889999999999999999863  233333322  2366778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.76  E-value=4.3e-18  Score=128.01  Aligned_cols=127  Identities=26%  Similarity=0.434  Sum_probs=105.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+.|.+.+.||+|+||.||.+.+.. ++..+++|.++... .....+..|+.+++.+ +|+|++++++.+..    .+.+
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~----~~~~   81 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVN-TGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLR----RDKL   81 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcC-CCcEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEe----CCEE
Confidence            4568999999999999999999887 78899999987643 3344578899999998 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++. ....+.....  ..+...+++|+|..|+   +|+|++|+||.
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil  138 (267)
T cd06645          82 WICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGK---MHRDIKGANIL  138 (267)
T ss_pred             EEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            99999999999999986 3333443322  2266778999999998   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.76  E-value=7.4e-18  Score=127.68  Aligned_cols=120  Identities=15%  Similarity=0.166  Sum_probs=93.0

Q ss_pred             EEeecCCeeEEEEEecCC-----------------------CCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcce
Q psy9091          47 VIGSGVCADVYEALDTQN-----------------------GNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPD  102 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~-----------------------~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~  102 (176)
                      .||+|+||.||+|....+                       ....+++|.+..... ....+..|+.++..+ .|+||++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   80 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-SHIHLAF   80 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-CCCCeee
Confidence            589999999999864210                       113578888765432 345678888899988 9999999


Q ss_pred             eceeEEeccCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         103 FFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       103 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++.+..    ....++||||+++|+|..++..  ...+.....  ..+...+|+|+|..++   +|+||||+||.
T Consensus        81 ~~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---iH~dlkp~Nil  149 (274)
T cd05076          81 VHGVCVR----GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNL---VHGNVCAKNIL  149 (274)
T ss_pred             EEEEEEe----CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCc---cCCCCCcccEE
Confidence            9999988    7889999999999999999862  233333322  2377778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.75  E-value=9.4e-18  Score=126.68  Aligned_cols=127  Identities=15%  Similarity=0.210  Sum_probs=101.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+|.+.+.||+|+||.||.+.....    ....+++|.+.....  ....+.+|+.++..+ +|+|++++++.+..    
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCRE----   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECC----
Confidence            5689999999999999999986430    235788998765432  456789999999999 99999999999877    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC----------CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD----------ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||+++|+|.+++...          .........  .+...+|+|+|..++   +|+|++|+||-
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i---~H~dlkp~Nil  149 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF---VHRDLAARNCL  149 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc---ccCcCccceEE
Confidence            68899999999999999998622          233333222  266778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.75  E-value=1.9e-17  Score=123.85  Aligned_cols=125  Identities=20%  Similarity=0.256  Sum_probs=104.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .+.|++.+.||.|+||.||.+..   .+..+++|.+.........+.+|+.+++.+ +|+|++++++.+..    ....+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~---~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~   76 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY---RGQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHPNLVQLLGVVLQ----GNPLY   76 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe---cCcEEEEEEeccchhHHHHHHHHHHHHHhc-CCcceeeeEEEEcC----CCCeE
Confidence            35689999999999999999987   457899999887654566789999999999 99999999999987    78899


Q ss_pred             EEEecCCCCChhhhcCC-C--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP-D--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~-~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|.+++.. .  ....+...  ..+...+|.|+|..++   +|+|++|+||-
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i---~H~di~p~Nil  134 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF---VHRDLAARNVL  134 (256)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cchhcccceEE
Confidence            99999999999999862 2  23333322  2367778999999999   99999999973

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.75  E-value=4.4e-18  Score=127.48  Aligned_cols=128  Identities=19%  Similarity=0.308  Sum_probs=105.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+...|++.+.||.|+||.||.+.+..  +..+++|.+..... ....+..|+.+++.+ +|+|++++++.+..    ..
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~   75 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKN--RVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSV----GE   75 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecC--CCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEec----CC
Confidence            344569999999999999999999865  67899999876543 456788999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++|+|.+++..   .........  ..+...++.|+|..|+   +|+|++|+||-
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~h~dl~~~nil  136 (261)
T cd05148          76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS---IHRDLAARNIL  136 (261)
T ss_pred             CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccCcceEE
Confidence            89999999999999999963   122333222  2266778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.75  E-value=1.2e-17  Score=125.85  Aligned_cols=134  Identities=25%  Similarity=0.384  Sum_probs=106.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~  114 (176)
                      ++...|.+.+.||+|+||.||.+.... .+..+++|.+.........+..|+.++..+.+|+|++++.+.+....  ...
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcC-CCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            456679999999999999999999877 78899999987654445667889998888767999999999987532  112


Q ss_pred             ceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|++|||+++|+|.+++..   ........  ...+...+++|+|..++   +|+|++|+||.
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---vh~dl~~~nil  143 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV---IHRDIKGQNVL  143 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCCHHHEE
Confidence            468999999999999999873   12232221  23367778999999998   99999999974

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG1290|consensus

Probab=99.75  E-value=1.1e-17  Score=131.48  Aligned_cols=131  Identities=19%  Similarity=0.282  Sum_probs=108.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-------CCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-------SNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-------~niv~~~~~~~~~~~  112 (176)
                      .+|.+.++||+|.|++||+|.+.. ..+.||+|+++....+.++.+.|+.+++++..+       ..||++++.|.-...
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq-~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQ-NKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeecc-CCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            689999999999999999999998 889999999998888999999999999986422       379999999987666


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++.++|+|+|++. -+|..+|..   ..+.+...+  ..+++.+|.|||+.  |++||-||||+||.
T Consensus       157 NG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvL  220 (590)
T KOG1290|consen  157 NGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVL  220 (590)
T ss_pred             CCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceee
Confidence            6899999999984 678888762   233443332  33888899999953  45599999999984

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.75  E-value=1.5e-17  Score=127.13  Aligned_cols=130  Identities=22%  Similarity=0.329  Sum_probs=107.2

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .....+|.+.+.||+|+||.||++.+.. ++..+++|.+.... .....+.+|+.+++.+ +|+|++++++.+..    .
T Consensus        15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~----~   88 (293)
T cd06647          15 GDPKKKYTRFEKIGQGASGTVYTAIDVA-TGQEVAIKQMNLQQQPKKELIINEILVMREN-KHPNIVNYLDSYLV----G   88 (293)
T ss_pred             cCchhhceeeeEecCCCCeEEEEEEEcC-CCCEEEEEEeccccchHHHHHHHHHHHHhhc-CCCCeeehhheeee----C
Confidence            4445789999999999999999999876 67889999986532 3345688899999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..|+|+||+++++|.+++..........  ...+...+|+++|..|+   +|+|++|+||-
T Consensus        89 ~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi---~H~dL~p~Nil  147 (293)
T cd06647          89 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNIL  147 (293)
T ss_pred             CcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCE---eeccCCHHHEE
Confidence            88999999999999999987443433332  22366778999999998   99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.75  E-value=2.7e-17  Score=125.91  Aligned_cols=131  Identities=20%  Similarity=0.301  Sum_probs=108.2

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ...+..+|++.+.||.|.+|.||++.+.. .+..+++|.+.... .....+..|+.+++.+ +|+|++.+++.+..    
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----   87 (296)
T cd06655          14 IGDPKKKYTRYEKIGQGASGTVFTAIDVA-TGQEVAIKQINLQKQPKKELIINEILVMKEL-KNPNIVNFLDSFLV----   87 (296)
T ss_pred             cCCCcceEEEEEEEecCCCeEEEEEEEcC-CCcEEEEEEEecccCchHHHHHHHHHHHHhc-CCCceeeeeeeEec----
Confidence            34455679999999999999999999877 78899999887542 2456678899999998 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++++||+++++|.+++.....+.....  ..+...+++++|..|+   +|+||+|+||.
T Consensus        88 ~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i---~H~dL~p~Nil  147 (296)
T cd06655          88 GDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQV---IHRDIKSDNVL  147 (296)
T ss_pred             CceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            7899999999999999999874444443322  2266678999999998   99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=2.3e-17  Score=134.76  Aligned_cols=136  Identities=14%  Similarity=0.137  Sum_probs=106.0

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      .......+|.+.+.||+|+||.||++.+.. .+..+|+|.+...   ......+.+|+.++..+ .|+|++.++..+...
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~  103 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVS-DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKK  103 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcC-CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecc
Confidence            345566789999999999999999999887 7899999998764   33455678899999998 999999988877542


Q ss_pred             c----CCcceEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 H----QTHSEIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~----~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .....++++|||+++|+|.++|..     ........  ...+.+.+|.|+|..++   +|+||||+||.
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~I---iHrDLKP~NIL  175 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHM---IHRDIKSANIL  175 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            1    001247899999999999998852     12232222  23377888999999998   99999999984

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.75  E-value=3.8e-17  Score=122.10  Aligned_cols=125  Identities=17%  Similarity=0.186  Sum_probs=103.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|+..+.||.|+||.|+.+.... .+..+++|.+...   ......+.+|+.+++.+ +|+|++++++.+..    .+.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~~~   74 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTE-DDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMD----DNTL   74 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcC-CCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEec----CCeE
Confidence            48999999999999999999887 7888999987653   33456788999999999 99999999999998    7899


Q ss_pred             EEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++...   ..+.....  ..+...+|.++|..++   +|+|++|+||.
T Consensus        75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~ni~  133 (256)
T cd08221          75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI---LHRDIKTLNIF  133 (256)
T ss_pred             EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc---cccCCChHhEE
Confidence            9999999999999999632   23332222  2256678999999998   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG2052|consensus

Probab=99.75  E-value=6.4e-18  Score=131.49  Aligned_cols=131  Identities=18%  Similarity=0.232  Sum_probs=104.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHh--ccCCCCcceeceeEEeccCCcc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRD--LSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~--l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ......+.+.||+|.||.||+|.|   .|+.||+|++....+  ..|.+|.++-..  + +|+||+.|+++.....++..
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~w---rGe~VAVKiF~srdE--~SWfrEtEIYqTvmL-RHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRW---RGEDVAVKIFSSRDE--RSWFRETEIYQTVML-RHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             hhheeEEEEEecCccccceeeccc---cCCceEEEEecccch--hhhhhHHHHHHHHHh-ccchhhhhhhccccCCCceE
Confidence            344688999999999999999999   568999999877543  456666665554  5 99999999999887667778


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHhhh--hhHHHHHHHHh-----cCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQDC--GDRYELGYVIG-----SGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--~~~~~l~~lh~-----~~i~~~v~~~~~~~nv~  174 (176)
                      .+|||++|.+.|||+|||.....+.......  +..-+|++||.     +|.+++.|||||+-||.
T Consensus       283 QLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL  348 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  348 (513)
T ss_pred             EEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence            8999999999999999998665555332111  44446999994     57899999999999985

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.75  E-value=2.1e-17  Score=125.88  Aligned_cols=130  Identities=15%  Similarity=0.160  Sum_probs=100.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ...++|++.+.||+|+||.||+|....    ..+..+|+|.+....  .....+..|+.+++.+ +|+||+++++.+.. 
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-   80 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSK-   80 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-
Confidence            345679999999999999999987531    023478999876542  2344678899999998 99999999999887 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCCC-----------CChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPDE-----------LDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....+++|||+++|+|.++++...           .....  ....+...+|.|+|..++   +|+|+||+||-
T Consensus        81 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dikp~nil  151 (288)
T cd05061          81 ---GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCM  151 (288)
T ss_pred             ---CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC---cCCCCChheEE
Confidence               678999999999999999985211           01111  123367778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.75  E-value=1.6e-17  Score=131.06  Aligned_cols=127  Identities=20%  Similarity=0.244  Sum_probs=100.2

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCcceE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTHSEI  117 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~~~~  117 (176)
                      |.+.+.||+|+||.||++.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.... .....+
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPR-DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECC-CCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceE
Confidence            6788999999999999999877 7889999988653   22445688999999999 9999999999998721 001279


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |++|||+. ++|.+++. ..........  ..+++.+|.|+|..++   +|+||||+||.
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~Nil  135 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI---LHRDIKPGNLL  135 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChHHEE
Confidence            99999997 67877775 3334443332  2377789999999998   99999999984

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=9.7e-18  Score=130.19  Aligned_cols=119  Identities=16%  Similarity=0.175  Sum_probs=94.1

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhcc--CCCCcceeceeEEeccCCcceEEEEE
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      ||+|+||.||++.+.. .+..+|+|.+....    ........|..++....  +|+|++.++..+..    ...+|+||
T Consensus         1 lG~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~----~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKD-TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT----DSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECC-CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec----CCeEEEEE
Confidence            6999999999999987 78899999986532    22334455666666543  79999999999988    78899999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++. ..........  ..+++.+|+|+|..++   +|+||||+||.
T Consensus        76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i---vHrDlkp~Nil  128 (330)
T cd05586          76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI---VYRDLKPENIL  128 (330)
T ss_pred             cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeE
Confidence            9999999998886 3334433322  2377889999999998   99999999984

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.75  E-value=8.7e-18  Score=133.93  Aligned_cols=96  Identities=24%  Similarity=0.288  Sum_probs=79.5

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +.-+.+.|.+.+.||+|+||.||+|.+..    ..+..+|+|.+...  ......+..|+.++..+.+|+||+++++.+.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            55666779999999999999999998632    03457999999764  2234568899999999844999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      .    ...+++||||+++|+|.++|.
T Consensus       112 ~----~~~~~iv~E~~~~g~L~~~l~  133 (401)
T cd05107         112 K----GGPIYIITEYCRYGDLVDYLH  133 (401)
T ss_pred             c----CCCcEEEEeccCCCcHHHHHH
Confidence            8    678999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.75  E-value=4e-18  Score=129.02  Aligned_cols=126  Identities=22%  Similarity=0.398  Sum_probs=105.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|+..+.||+|+||.||+|.+.. .+..+++|.+...  ......+.+|+.+++.+ +|+|++++++.+..    .+..
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   77 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNR-TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLK----GTKL   77 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcC-CCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhccccc----CCce
Confidence            457778899999999999999877 7789999998753  23456789999999998 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++++|.+++..........  ...+...++.|+|..++   +|+|++|+||-
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---vH~dl~p~ni~  133 (277)
T cd06642          78 WIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK---IHRDIKAANVL  133 (277)
T ss_pred             EEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe---eccCCChheEE
Confidence            99999999999999987544444332  22366778999999988   99999999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.75  E-value=2e-17  Score=127.04  Aligned_cols=127  Identities=19%  Similarity=0.238  Sum_probs=100.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe--EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK--KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||+|.+.. ++.  .+++|.+...  ......+..|+.++..+.+|+|++++++.+..    .+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEcc-CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC----CC
Confidence            358999999999999999999866 554  4577766542  23455788899999888689999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|++|||+++|+|.+++...                 ..+....  ...+...+|+|+|..|+   +|+|++|+||.
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi---~H~dlkp~Nil  156 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNIL  156 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc---cccccchheEE
Confidence            899999999999999998621                 1122222  22266778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.75  E-value=8.7e-18  Score=131.05  Aligned_cols=97  Identities=20%  Similarity=0.257  Sum_probs=78.4

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      |..+.++|++.+.||+|+||.||.|....    .++..+|+|.++..  ......+..|+.++..+.+|+||+++++.+.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            56677789999999999999999996432    02468999988753  2344567889999998867999999999876


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      ..   +..++++|||+++|+|.++|.
T Consensus        82 ~~---~~~~~~v~ey~~~~~L~~~i~  104 (337)
T cd05054          82 KP---GGPLMVIVEYCKFGNLSNYLR  104 (337)
T ss_pred             cC---CCCEEEEEecCCCCCHHHHHH
Confidence            53   567999999999999999885

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.75  E-value=2.2e-17  Score=123.90  Aligned_cols=126  Identities=17%  Similarity=0.237  Sum_probs=100.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.++|.+...||+|++|.||++.+..  +..+++|.+.........+.+|+.+++.+ +|+|++.+++.+..     +..
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-----~~~   75 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNG--TTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-----EPI   75 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcC--CceEEEEEcccCCccHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-----CCc
Confidence            44569999999999999999998765  34689998776544456788999999999 99999999988744     568


Q ss_pred             EEEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++...   .......  ...+...+|+|+|..|+   +|+|++|+||.
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~dl~~~Nil  134 (260)
T cd05069          76 YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY---IHRDLRAANIL  134 (260)
T ss_pred             EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccCcceEE
Confidence            9999999999999998621   1233222  22266778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.75  E-value=2.5e-17  Score=124.65  Aligned_cols=130  Identities=13%  Similarity=0.181  Sum_probs=101.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ...++|++.+.||+|+||.||.+.+..    ..+..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+.. 
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~-   80 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQ-   80 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-
Confidence            445679999999999999999987642    024579999876432  2445688999999998 99999999999987 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCCC-----------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPDE-----------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....+++|||+++|+|.+++....           ......  ...+...+|.|+|..++   +|+|+||+||-
T Consensus        81 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---vH~dlkp~Nil  151 (277)
T cd05062          81 ---GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM  151 (277)
T ss_pred             ---CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCcchheEE
Confidence               788999999999999999986211           111111  12266778999999988   99999999973

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.75  E-value=1.5e-17  Score=125.00  Aligned_cols=125  Identities=17%  Similarity=0.255  Sum_probs=104.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .|+..+.||+|++|.||.+.+.. ++..+++|.+....       .....+..|+.+++.+ +|+|++++++.+..    
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----   74 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVK-TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCE----   74 (268)
T ss_pred             CccccceecCcCceEEEEEEEcC-CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceecc----
Confidence            37788999999999999999877 78899999987532       2356789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..++++||+++++|.+++. ....+.....  ..+.+.+|.++|..|+   +|+|++|+||.
T Consensus        75 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i---~H~~i~~~nil  135 (268)
T cd06630          75 DSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQI---IHRDVKGANLL  135 (268)
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            788999999999999999986 2333333332  2377888999999998   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.75  E-value=2.3e-17  Score=125.19  Aligned_cols=127  Identities=16%  Similarity=0.185  Sum_probs=99.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC---CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ---NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~---~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +.|++.+.||+|+||.||+|....   ..+..+++|.+...  ......+.+|+.+++.+ +|+|++++++.+..    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQ----E   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEec----C
Confidence            458899999999999999998532   03467899988753  23446788999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC------------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD------------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~------------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...|++|||+++|+|.+++...                  ..+....  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dlkp~nil  156 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF---VHKDLAARNIL  156 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe---ehhccccceEE
Confidence            8899999999999999988411                  1111111  22266678999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.75  E-value=1.9e-17  Score=126.53  Aligned_cols=129  Identities=15%  Similarity=0.185  Sum_probs=100.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC---------------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ---------------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~---------------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~ni  100 (176)
                      +.++|++.+.||+|+||.||.+.+..               +....+|+|.+...  ......+..|+.+++.+ +|+|+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i   81 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNI   81 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCc
Confidence            34579999999999999999985421               02346889988753  23456789999999999 99999


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCC------------CChhh--HhhhhhHHHHHHHHhcCCCccccc
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE------------LDLDN--LQDCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      +++++.+..    ....+++|||+++|+|.+++....            .+...  ....+...+|+|+|..++   +|+
T Consensus        82 ~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~  154 (296)
T cd05095          82 IRLLAVCIT----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF---VHR  154 (296)
T ss_pred             ceEEEEEec----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe---ecc
Confidence            999999988    788999999999999999986211            11111  123366778999999998   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      |+||+||.
T Consensus       155 dlkp~Nil  162 (296)
T cd05095         155 DLATRNCL  162 (296)
T ss_pred             cCChheEE
Confidence            99999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.75  E-value=2.1e-17  Score=125.34  Aligned_cols=140  Identities=27%  Similarity=0.402  Sum_probs=109.7

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ++.....+...|++.+.+|.|+||.||.+.+.. .+..+++|.+.........+..|+.++..+.+|+|++++++.+...
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcC-CCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            344445566789999999999999999999987 7889999998776555566888999888876799999999988532


Q ss_pred             c--CCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 H--QTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~--~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .  .....++++|||+++|+|.+++..   ........  ...+...+++|+|..++   +|+|++|+||-
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---vH~dl~~~nil  153 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV---IHRDIKGQNVL  153 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            1  124679999999999999999862   22333222  22366778999999998   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.75  E-value=1.5e-17  Score=124.64  Aligned_cols=127  Identities=19%  Similarity=0.243  Sum_probs=101.2

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.++|++.+.||+|+||.||.+.+..  +..+++|.+.........+.+|+.+++.+ +|+|++++++.+..     ..
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-----~~   74 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNG--NTKVAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLVQLYAVVSE-----EP   74 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecC--CceeEEEEecCCCCCHHHHHHHHHHHHhc-CCCceEEEEeEECC-----CC
Confidence            345679999999999999999998754  56789998876443456789999999999 99999999987743     56


Q ss_pred             EEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++++|.+++...   ..+.+...  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~di~p~Nil  134 (260)
T cd05070          75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLRSANIL  134 (260)
T ss_pred             cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCccceEE
Confidence            89999999999999998621   23333222  2266778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.9e-17  Score=123.04  Aligned_cols=126  Identities=17%  Similarity=0.298  Sum_probs=103.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +.|.+.+.||+|++|.||.+.... ++..+++|.+....      .....+.+|+.+++.+ +|+||+++++.+..    
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----   75 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVD-TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRD----   75 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcC-CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEcc----
Confidence            358999999999999999999877 78899999886531      2345688899999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++++||+++++|.+++. ........  ....+...+|.++|..++   +|+|++|+||.
T Consensus        76 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nil  136 (263)
T cd06625          76 DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI---VHRDIKGANIL  136 (263)
T ss_pred             CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            789999999999999999886 22223222  223367778999999998   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.74  E-value=2.5e-17  Score=126.59  Aligned_cols=133  Identities=20%  Similarity=0.304  Sum_probs=103.3

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC------CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN------GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~------~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      +....++|.+.+.||+|+||.||.+.+...      ....+|+|.+...  ......+..|+.++..+.+|+|++++++.
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            444457899999999999999999976320      1246899988754  23445688899999988679999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +..    ...+|++|||+++|+|.+++...                 .......  ...+...+|+|+|..|+   +|+|
T Consensus        93 ~~~----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi---~H~d  165 (307)
T cd05098          93 CTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC---IHRD  165 (307)
T ss_pred             Eec----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc---cccc
Confidence            988    78899999999999999998621                 1122111  12366778999999988   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      ++|+||-
T Consensus       166 lkp~Nil  172 (307)
T cd05098         166 LAARNVL  172 (307)
T ss_pred             ccHHheE
Confidence            9999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.7e-17  Score=122.98  Aligned_cols=135  Identities=30%  Similarity=0.451  Sum_probs=108.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      +.+.++|++.+.||+|++|.||.+.+.. .+..+++|.+.........+..|+.+++.+..|+|++++++.+....  ..
T Consensus         2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           2 PDPTGIFELVEVIGEGTYGKVYKARHKK-TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             CCchhheeheeeecCCCCeEEEEEEECC-CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            4566789999999999999999999977 77889999988765555678899999998767999999999997632  11


Q ss_pred             cceEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++++|||+++++|.+++..     ...+....  ...+...+|+|+|..++   +|+|++|+||.
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i---~H~~l~p~ni~  145 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV---IHRDIKGQNIL  145 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCHHHEE
Confidence            3458999999999999998752     22333322  22267778999999998   99999999984

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.74  E-value=5.6e-17  Score=120.99  Aligned_cols=124  Identities=16%  Similarity=0.231  Sum_probs=103.4

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|.+.+.||+|++|.||++.+.. .+..+++|.+...   ......+..|+.+++.+ +|+|++++++.+..    .+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   74 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKA-DKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLD----KGKL   74 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcC-CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeecc----CCEE
Confidence            37888999999999999999987 7889999988753   34566788999999998 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                      +++|||+++++|.+++..   ...+....  ...+...+|.|+|..|+   +|+|++|+||
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i---~h~dl~~~ni  132 (256)
T cd08529          75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI---LHRDIKSLNL  132 (256)
T ss_pred             EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcceE
Confidence            999999999999999863   22232221  12266778999999988   9999999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.2e-17  Score=124.99  Aligned_cols=124  Identities=21%  Similarity=0.217  Sum_probs=100.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      .|++.+.||+|+||.||.+.+..  +..+++|.+.........+..|+.+++.+ +|+|++++++.+..    ....+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~--~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~lv   77 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRG--KIDVAIKMIREGAMSEDDFIEEAKVMMKL-SHPNLVQLYGVCTK----QRPIFIV   77 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecC--CccEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEEEEEEEEcC----CCceEEE
Confidence            48889999999999999998753  45789998865433345678899999999 99999999999887    7889999


Q ss_pred             EecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++++|.+++..  ...+.+...  ..+...+++++|..++   +|+|++|+||-
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dl~p~ni~  132 (256)
T cd05059          78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF---IHRDLAARNCL  132 (256)
T ss_pred             EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccccHhhEE
Confidence            999999999999862  233333322  2366778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.74  E-value=3.9e-17  Score=131.69  Aligned_cols=129  Identities=24%  Similarity=0.278  Sum_probs=97.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc----C
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH----Q  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~----~  112 (176)
                      .....|.+.+.||+|+||.||+|.+.. ++..+|+|.+.....   ...+|+.+++.+ +|+||+++++.+....    .
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~~vAiK~i~~~~~---~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICID-TSEKVAIKKVLQDPQ---YKNRELLIMKNL-NHINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECC-CCCEEEEEEEecCcc---hHHHHHHHHHhc-CCCCCcceeeeEeecccccCC
Confidence            345679999999999999999999987 788999998865432   235699999999 9999999988775421    1


Q ss_pred             CcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....++++|||++ ++|.+++.     .........  ...+.+.+|+|+|..++   |||||||+||.
T Consensus       138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I---iHrDLKp~NIL  202 (440)
T PTZ00036        138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI---CHRDLKPQNLL  202 (440)
T ss_pred             CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCcCHHHEE
Confidence            1235789999998 46766653     122333222  22377788999999998   99999999984

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.74  E-value=3.6e-17  Score=124.90  Aligned_cols=124  Identities=25%  Similarity=0.337  Sum_probs=102.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +|++.+.||+|+||.||+|.+.. .+..+++|.++...      .....+..|+.+++.+ +|+|++++++.+..    .
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~   74 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE-TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGH----K   74 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC-CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeec----C
Confidence            48888999999999999999987 78899999987542      1234567899999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||||+ +|+|.+++...  ..+.....  ..++..+|+|+|..|+   +|+||+|+||-
T Consensus        75 ~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~dl~p~nil  134 (298)
T cd07841          75 SNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI---LHRDLKPNNLL  134 (298)
T ss_pred             CEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCChhhEE
Confidence            8999999999 89999999733  34443332  2267788999999998   99999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=1e-17  Score=127.26  Aligned_cols=125  Identities=17%  Similarity=0.264  Sum_probs=103.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|++++.||+|+||.||++.+.. .+..+++|.+...  ......+.+|+.++..+ +|+|++++++.+..    .+.++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~~   75 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRP-TGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFI----EGAVY   75 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcC-CCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheec----CCeEE
Confidence            58889999999999999999987 7889999988753  23446788999999998 99999999999988    78999


Q ss_pred             EEEecCCCCChhhhcCCC----CCChhhHhh--hhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPD----ELDLDNLQD--CGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~----~~~~~~~~~--~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|..++...    ..+......  .+...+|.|+|. .++   +|+||+|+||.
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i---~H~dl~p~nil  135 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI---IHRDVKPTNVL  135 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCE---eeCCCCHHHEE
Confidence            999999999999988632    334433222  266778999996 577   99999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.74  E-value=1.6e-17  Score=124.30  Aligned_cols=125  Identities=17%  Similarity=0.311  Sum_probs=104.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++.+.||.|+||.||.+.+.. ++..+++|.+....    .....+..|+.+++.+ +|||++++++.+..    ...
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   74 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRD-TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQD----EEN   74 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEcc-CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcC----CCe
Confidence            48899999999999999999877 78899999987532    3456789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCCC-CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD-ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++||+++++|.+++... ..+.....  ..+...+|.|+|..++   +|+|++|+||.
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i---~h~dl~~~nil  132 (258)
T cd05578          75 MYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGI---IHRDIKPDNIL  132 (258)
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHeE
Confidence            99999999999999998633 34433322  2266778999999998   99999999974

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.74  E-value=4.9e-17  Score=121.83  Aligned_cols=125  Identities=22%  Similarity=0.379  Sum_probs=104.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.||.+.+.. .+..+++|.+....   .....+..|+.+++.+ +|+||+++++.+..    .+.+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~----~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLD-TGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVH----REKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECC-CCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEec----CCEE
Confidence            48899999999999999999877 77899999987643   3567889999999999 99999999999888    7889


Q ss_pred             EEEEecCCCCChhhhcCCC-CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD-ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~-~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||+++++|.+++... .......  ...+...+|+++|..++   +|+|++|+||.
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i---~H~dl~~~nil  131 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI---VHRDIKPANIF  131 (264)
T ss_pred             EEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            9999999999999998732 2333222  22367778999999998   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.74  E-value=4.9e-17  Score=123.23  Aligned_cols=126  Identities=16%  Similarity=0.227  Sum_probs=103.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|+..+.||+|+||.||++.+.. .+..+++|.+....   .....+..|+.+++.+ .|+|++++++.+..    ...
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~~   74 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRE-TGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRR----KRK   74 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECC-CCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEee----CCE
Confidence            368999999999999999999987 78899999876432   2334578899999998 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||++++.|..++. ....+.....  ..++..+|+|+|..++   +|+|++|+||.
T Consensus        75 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i---~H~dl~p~nil  132 (286)
T cd07847          75 LHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC---IHRDVKPENIL  132 (286)
T ss_pred             EEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCChhhEE
Confidence            999999999988887775 3334443322  2367778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=5.1e-17  Score=125.23  Aligned_cols=125  Identities=18%  Similarity=0.261  Sum_probs=104.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +|+..+.||+|+||.||.+.... .+..+++|.+....    .....+..|+.++..+ +|+||+++++.+..    ...
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~   75 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKG-TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQT----ETY   75 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcC-CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeec----CCE
Confidence            58999999999999999999987 78899999987642    2445688899999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .|++|||+.+++|.+++..   ...+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  135 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI---VYRDLKPENIL  135 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe---eccCCChHHeE
Confidence            9999999999999999862   223333322  2367778999999998   99999999984

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG1094|consensus

Probab=99.74  E-value=3.5e-18  Score=136.90  Aligned_cols=128  Identities=18%  Similarity=0.229  Sum_probs=108.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+++.+.+.++||+|.||.|+.|.-..  +..+|+|.++...  ..+..|..|+.+|.++ +||||+.+.+.|..    +
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~----D  607 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQ----D  607 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecC--ceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeec----C
Confidence            455678888999999999999999853  5789999998864  3467899999999999 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcCCC----CCChhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD----ELDLDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|+||+++|+|-+|+...    ....+....+ ++.-+|+||-++++   ||||+.+.|..
T Consensus       608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf---VHrd~a~rNcL  669 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF---VHRDLATRNCL  669 (807)
T ss_pred             CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch---hhcccccccee
Confidence            9999999999999999999732    2233334455 66667999999999   99999999964

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.5e-17  Score=127.09  Aligned_cols=128  Identities=16%  Similarity=0.216  Sum_probs=100.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCC-------------CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCccee
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQN-------------GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~-------------~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      .++|.+.+.||+|+||.||.+.....             ....+|+|.+...  ......+.+|+.++..+ +|+|++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~   82 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRL   82 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeE
Confidence            35799999999999999999876420             1235899988753  23455789999999999 99999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcCCCC-------------CChhhH--hhhhhHHHHHHHHhcCCCccccccC
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE-------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEAL  168 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~  168 (176)
                      ++.+..    .+..+++|||+++++|.+++....             ......  ...+...+|+|+|..++   +|+|+
T Consensus        83 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dl  155 (295)
T cd05097          83 LGVCVS----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF---VHRDL  155 (295)
T ss_pred             EEEEcC----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe---ecccc
Confidence            999988    788999999999999999885211             111111  22366678999999998   99999


Q ss_pred             CCCCcc
Q psy9091         169 DTQNVT  174 (176)
Q Consensus       169 ~~~nv~  174 (176)
                      +|+||.
T Consensus       156 kp~Nil  161 (295)
T cd05097         156 ATRNCL  161 (295)
T ss_pred             ChhhEE
Confidence            999984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.74  E-value=2.4e-17  Score=125.04  Aligned_cols=118  Identities=14%  Similarity=0.106  Sum_probs=95.3

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||+|+||.||++.... .+..+|+|.+....    .....+..|+.++..+ +|+||+.+++.+..    ...++++|||
T Consensus         1 lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~----~~~~~lv~e~   74 (277)
T cd05607           1 LGKGGFGEVCAVQVKN-TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFES----KTHLCLVMSL   74 (277)
T ss_pred             CCCCCceEEEEEEEcc-CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEec----CCeEEEEEec
Confidence            6899999999999987 78899999886421    1233456799999999 99999999999988    7899999999


Q ss_pred             CCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++..   ...+.....  ..+...+|+|+|..|+   +|+||+|+||-
T Consensus        75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dikp~Nil  127 (277)
T cd05607          75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI---VYRDMKPENVL  127 (277)
T ss_pred             CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE---EEccCChHhEE
Confidence            999999888741   223443322  2367788999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0660|consensus

Probab=99.74  E-value=4.9e-18  Score=128.99  Aligned_cols=134  Identities=21%  Similarity=0.208  Sum_probs=108.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec-C--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI-N--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~-~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .......|..++.||.|+||.|+.+.+.. ++..||+|-+.. .  .-..+...+|+.+++.+ +|+||+.+.+.+..+.
T Consensus        17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~-t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~   94 (359)
T KOG0660|consen   17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKR-TGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPS   94 (359)
T ss_pred             EEeccceecccccccCcceeeEEEEEEcC-CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccccc
Confidence            34445567778999999999999999998 899999998863 2  23567789999999999 8999999999997733


Q ss_pred             -CCcceEEEEEecCCCCChhhhcCCC--CCChhhH-hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -QTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL-QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~-~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+.+|+|+|+|+ -+|...|+.+  +.+.... ...|.+-+|+|+|+.++   +|||+||+|+.
T Consensus        95 ~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnV---iHRDLKPsNll  157 (359)
T KOG0660|consen   95 RDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANV---IHRDLKPSNLL  157 (359)
T ss_pred             ccccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccc---cccccchhhee
Confidence             55778999999995 7899999843  3333222 23388999999999999   99999999974

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.74  E-value=4.3e-17  Score=121.65  Aligned_cols=125  Identities=20%  Similarity=0.331  Sum_probs=102.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +|+..+.||+|+||.||+|.... .+..+++|.+....      .....+.+|+.+++.+ +|+|++++++.+..    .
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~   74 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLD-DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTERE----E   74 (258)
T ss_pred             CccccceeeecCCceEEEEEEcC-CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEec----C
Confidence            36778899999999999999976 67899999886532      2456788999999998 99999999999888    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC-CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD-ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||+++++|.+++... ..+....  ...+...+++++|..|+   +|+|++|+||.
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~~~ni~  134 (258)
T cd06632          75 DNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT---VHRDIKGANIL  134 (258)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            8899999999999999998632 2333222  22266778999999998   99999999984

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.74  E-value=5.6e-17  Score=121.71  Aligned_cols=126  Identities=17%  Similarity=0.254  Sum_probs=103.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++.+.||+|+||.||++.... ++..+++|.++..    ......+.+|+.+++.+ +|+|++.+++.+..    .+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~----~~   75 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLL-DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIE----NN   75 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcC-CCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeec----CC
Confidence            469999999999999999999987 7889999988642    22356788999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC-----CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-----DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++|+|.+++..     .....+...  ..+...+|+++|..|+   +|+|++|+||-
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~nil  138 (267)
T cd08224          76 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI---MHRDIKPANVF  138 (267)
T ss_pred             eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE---ecCCcChhhEE
Confidence            89999999999999988852     122332222  2266778999999998   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.74  E-value=2.7e-17  Score=124.98  Aligned_cols=128  Identities=20%  Similarity=0.207  Sum_probs=101.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEec----CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDT----QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..|++++.||+|+||.||.+.+.    . .+..+++|.+...  ......+.+|+.+++.+ .|+|++++.+.+...  +
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~--~   79 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDN-TGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTED--G   79 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCC-ccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecC--C
Confidence            35789999999999999999753    2 4578999998754  23456789999999999 999999999988762  1


Q ss_pred             cceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++++|||+++++|.+++...  ..+....  ...+...+|+|+|..|+   +|+|++|+||-
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi---~H~dlkp~Nil  141 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVL  141 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecccchheEE
Confidence            35689999999999999998632  2333322  22377778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.74  E-value=2e-17  Score=125.47  Aligned_cols=126  Identities=18%  Similarity=0.269  Sum_probs=104.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +.|++.+.||+|+||.||++.+.. .+..+++|.+... ......+.+|+.+++.+ +|+|++++++.+..    .+..+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~----~~~~~   78 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKE-TGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYY----ENNLW   78 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECC-CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEee----CCEEE
Confidence            447888999999999999999987 7888999988754 34566788899999998 99999999999988    78999


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++|+|..++.  .........  ...+.+.+|.|+|..|+   +|+|++|+||-
T Consensus        79 ~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i---~H~dlkp~nil  135 (282)
T cd06643          79 ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI---IHRDLKAGNIL  135 (282)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCcccEE
Confidence            9999999999988774  223333332  22367778999999988   99999999983

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.74  E-value=3.9e-17  Score=124.37  Aligned_cols=125  Identities=19%  Similarity=0.221  Sum_probs=102.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|.+.+.||+|++|.||++.+.. .+..+++|.+....  .....+.+|+.+++.+ +|+||+++++.+..    ....
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~   78 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKL-TGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHT----KKTL   78 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcC-CCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEec----CCeE
Confidence            569999999999999999999887 78899999987542  1234567899999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||++ ++|.+++..  ...+......  .+...+|.|+|..++   +|+|++|+||.
T Consensus        79 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i---~H~dl~p~nil  135 (291)
T cd07844          79 TLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV---LHRDLKPQNLL  135 (291)
T ss_pred             EEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccCCHHHEE
Confidence            99999998 589888752  2333333222  267778999999998   99999999974

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.74  E-value=3.1e-17  Score=128.77  Aligned_cols=130  Identities=18%  Similarity=0.245  Sum_probs=100.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      ...+|++.+.||+|+||.||.+.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+....  .
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTV-LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcC-CCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence            44679999999999999999999987 7889999998643   23455678899999998 9999999999986521  0


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+|++|||+++ +|.+.+... .+....  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~qi~~~L~~LH~~~i---vHrDlkp~NIl  155 (359)
T cd07876          97 EFQDVYLVMELMDA-NLCQVIHME-LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  155 (359)
T ss_pred             ccceeEEEEeCCCc-CHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            12358999999975 566665322 222222  23377788999999998   99999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.73  E-value=4.3e-17  Score=124.32  Aligned_cols=127  Identities=17%  Similarity=0.194  Sum_probs=102.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCC----------------eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGN----------------KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~----------------~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~ni  100 (176)
                      ..+|.+.+.||+|+||.||.+.+.. .+                ..+++|.+...  ......+.+|+.++..+ +|+|+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i   81 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADG-LQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNI   81 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEecc-CCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCE
Confidence            3568999999999999999987643 22                35789988754  33466789999999999 99999


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhhcCCC------------CCChhhHhh--hhhHHHHHHHHhcCCCccccc
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPD------------ELDLDNLQD--CGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      +++++.+..    ....+++|||+++++|.+++...            ..+......  .+...+|+|+|..++   +|+
T Consensus        82 ~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i---~H~  154 (296)
T cd05051          82 ARLLGVCTV----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF---VHR  154 (296)
T ss_pred             eEEEEEEec----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc---ccc
Confidence            999999988    78899999999999999998622            233332222  266778999999998   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      |+||+||.
T Consensus       155 dlkp~Nil  162 (296)
T cd05051         155 DLATRNCL  162 (296)
T ss_pred             ccchhcee
Confidence            99999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=4.2e-17  Score=122.95  Aligned_cols=125  Identities=18%  Similarity=0.332  Sum_probs=102.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +|.+.+.||+|+||.||+|.... .+..+++|.+....           ...+.+..|+.++..+ +|+|++++++.+..
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   79 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVT-TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETT   79 (272)
T ss_pred             ceeecceecccCceEEEEEeecC-CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEecc
Confidence            47888999999999999999877 78899999876421           1234678899999999 99999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.++++|||+++|+|.++++. ...+.....  ..+...+|.++|..++   +|+|++|+||.
T Consensus        80 ----~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~~~nil  140 (272)
T cd06629          80 ----EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGI---LHRDLKADNLL  140 (272)
T ss_pred             ----CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe---eecCCChhhEE
Confidence                7889999999999999999873 333433322  2367778999999988   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00284 protein kinase; Provisional

Probab=99.73  E-value=7.7e-17  Score=130.83  Aligned_cols=127  Identities=15%  Similarity=0.223  Sum_probs=96.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC------CCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH------SNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h------~niv~~~~~~~~~~~  112 (176)
                      ..+|.+.+.||+|+||.||++.+.. .+..||+|+++...........|+.++..+ .|      .+++.+.+.+...  
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~-~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~i~~~~~~~--  203 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRK-RKEYCAVKIVRNVPKYTRDAKIEIQFMEKV-RQADPADRFPLMKIQRYFQNE--  203 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcC-CCeEEEEEEEecchhhHHHHHHHHHHHHHH-hhcCcccCcceeeeEEEEEcC--
Confidence            4679999999999999999999987 788999999976544444566677777665 44      4578888887652  


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|++||++ +++|.+++. .........  ...+++.+|.|+|. .||   |||||||+||.
T Consensus       204 -~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gI---iHrDlKP~NIL  264 (467)
T PTZ00284        204 -TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHL---MHTDLKPENIL  264 (467)
T ss_pred             -CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCe---ecCCCCHHHEE
Confidence             46799999988 678888875 333333322  23377889999997 587   99999999984

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.73  E-value=5.7e-17  Score=124.48  Aligned_cols=133  Identities=19%  Similarity=0.247  Sum_probs=104.5

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +.-..++|.+.+.||+|+||.||.+.+..    ..+..+|+|.+...  ......+..|+.+++.+.+|+||+++++.+.
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            34455679999999999999999997521    03457899988754  2345678999999999867999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCCC---CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKPD---ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+.++++|||+++|+|.++++..   ..+......  .+.+.+|+|+|..++   +|+|++|+||.
T Consensus       110 ~----~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i---vH~dlkp~Nil  173 (302)
T cd05055         110 I----GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNVL  173 (302)
T ss_pred             c----CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ehhhhccceEE
Confidence            8    78899999999999999998622   133333222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.73  E-value=7.3e-17  Score=120.36  Aligned_cols=125  Identities=22%  Similarity=0.234  Sum_probs=103.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|...+.||+|+||.||.+.... ++..+++|.+....   .....+..|+.+++.+ +|+|++++++.+..    .+.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~   74 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA-DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLE----DKAL   74 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC-CCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEec----CCEE
Confidence            48899999999999999999987 78899999987642   3456788999999999 99999999999887    7889


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++..   ...+.....  ..+...+|+++|.+++   +|+|++|+||.
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i---~h~dl~~~nil  133 (256)
T cd08220          75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI---LHRDLKTQNIL  133 (256)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            999999999999999862   123333222  2366778999999988   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=1.1e-16  Score=125.33  Aligned_cols=128  Identities=14%  Similarity=0.067  Sum_probs=95.2

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      .+.++...+.|.+.+.||+|+||.||+|.+....+..+|+|.+...      ......+.+|+.++..+ .|+|++..+.
T Consensus        10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~   88 (365)
T PRK09188         10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLL   88 (365)
T ss_pred             ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEE
Confidence            3446667788999999999999999999875413556799986532      12355689999999999 9999885322


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccC-CCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEAL-DTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~-~~~nv~  174 (176)
                         .    .+..|++|||++|++|... ....  . .....+...+|+++|..|+   +|||| ||+||.
T Consensus        89 ---~----~~~~~LVmE~~~G~~L~~~-~~~~--~-~~~~~~i~~aL~~lH~~gI---iHrDL~KP~NIL  144 (365)
T PRK09188         89 ---A----TGKDGLVRGWTEGVPLHLA-RPHG--D-PAWFRSAHRALRDLHRAGI---THNDLAKPQNWL  144 (365)
T ss_pred             ---E----cCCcEEEEEccCCCCHHHh-Cccc--h-HHHHHHHHHHHHHHHHCCC---eeCCCCCcceEE
Confidence               2    2447999999999999733 2111  1 1224467788999999999   99999 999984

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.73  E-value=5.7e-17  Score=122.43  Aligned_cols=129  Identities=17%  Similarity=0.205  Sum_probs=102.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ..++|.+.+.||+|+||.||.+.+..    .....+++|.+....  .....+.+|+.++..+ +|+|++++++.+..  
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~--   80 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVST--   80 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcC--
Confidence            44679999999999999999998753    023689999986542  3455688999999998 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCC-----------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDE-----------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....+++|||+++|+|.+++....           ......  ...+...+|.|+|..++   +|+|++|+||.
T Consensus        81 --~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~di~p~nil  151 (277)
T cd05032          81 --GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF---VHRDLAARNCM  151 (277)
T ss_pred             --CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccChheEE
Confidence              788999999999999999985211           112221  12366778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG1026|consensus

Probab=99.73  E-value=5.8e-18  Score=140.13  Aligned_cols=136  Identities=20%  Similarity=0.210  Sum_probs=107.7

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFF  104 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~  104 (176)
                      +.....-+.......+.||+|+||+||++....-    ....||||.++...  ....+|.+|+.+++.+ +|+|||+++
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLl  555 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLL  555 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEE
Confidence            3444455666788889999999999999976420    12468999988753  3677899999999999 999999999


Q ss_pred             eeEEeccCCcceEEEEEecCCCCChhhhcC-CC-----C---------CChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         105 GAYMKKHQTHSEIWFVMQREAEMPPPRALK-PD-----E---------LDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       105 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~-----~---------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      |.|..    ++++++|+|||.+|+|.+||+ ..     .         +.....  ...|+..+|.||-+...   ||||
T Consensus       556 GVC~~----~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~F---VHRD  628 (774)
T KOG1026|consen  556 GVCRE----GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHF---VHRD  628 (774)
T ss_pred             EEEcc----CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcc---cccc
Confidence            99999    899999999999999999997 11     1         111111  12277778999999999   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      |+.+|..
T Consensus       629 LATRNCL  635 (774)
T KOG1026|consen  629 LATRNCL  635 (774)
T ss_pred             hhhhhce
Confidence            9999964

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.73  E-value=4.9e-17  Score=123.41  Aligned_cols=126  Identities=19%  Similarity=0.174  Sum_probs=99.8

Q ss_pred             eEEeeEEeecCCeeEEEEEec----CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          42 YELGYVIGSGVCADVYEALDT----QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      |+..+.||+|+||.||.+.+.    . .+..+|+|.+...  ......+.+|+.+++.+ +|+|++++.+.+...  ...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~   81 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDG-TGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQ--GGK   81 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCC-CCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC--CCc
Confidence            488999999999999887542    2 4568999998754  23456788999999999 999999999987652  135


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++.....+......  .+...+|.|+|..++   +|+|+||+||.
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i---~H~dlkp~Nil  139 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHY---IHRDLAARNVL  139 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccChheEE
Confidence            689999999999999998744444433322  267778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.73  E-value=8.8e-17  Score=120.85  Aligned_cols=128  Identities=16%  Similarity=0.305  Sum_probs=101.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..|++.+.||+|+||.||.+.+.. ++..+++|.+...      ......+.+|+.++..+ .|+|++++++.+....  
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--   77 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDAD-TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPM--   77 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcC-CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCC--
Confidence            358999999999999999999877 7889999987642      12345788899999999 9999999999886521  


Q ss_pred             cceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++++|||+++|+|.+++.. ...+....  ...+...+|+++|..++   +|+|++|+||-
T Consensus        78 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nil  138 (265)
T cd06652          78 ERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMI---VHRDIKGANIL  138 (265)
T ss_pred             CceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            3468899999999999999862 22333222  22366778999999998   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.73  E-value=6e-17  Score=120.82  Aligned_cols=126  Identities=19%  Similarity=0.416  Sum_probs=105.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .+.|+..+.||+|+||.||.+.... .+..+++|.++.... ...+..|+.+++.+ +|+|++++++.+..    ...+|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-~~~~i~~~~~~~~~----~~~~~   74 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKE-TGQVVAIKVVPVEED-LQEIIKEISILKQC-DSPYIVKYYGSYFK----NTDLW   74 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcC-CCcEEEEEEeecHHH-HHHHHHHHHHHHhC-CCCcEeeeeeeeec----CCcEE
Confidence            4679999999999999999999977 678999999876543 56789999999999 99999999999988    78899


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++++|.+++.  ....+......  .+...+|.++|..++   +|+|++|+||.
T Consensus        75 l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i---~H~dl~~~ni~  131 (256)
T cd06612          75 IVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK---IHRDIKAGNIL  131 (256)
T ss_pred             EEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcceEE
Confidence            9999999999999986  22333333222  266678999999998   99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.73  E-value=9.3e-18  Score=125.83  Aligned_cols=120  Identities=15%  Similarity=0.200  Sum_probs=94.9

Q ss_pred             eEEeecCCeeEEEEEecCCCC-------eEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          46 YVIGSGVCADVYEALDTQNGN-------KKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~-------~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.||+|+||.||+|.... .+       ..+++|.+.... .....+..|+.+++.+ .|+|++++++.+..    +...
T Consensus         1 ~~lg~G~~~~Vy~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~----~~~~   74 (258)
T cd05078           1 ESLGQGTFTKIFKGIRRE-VGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-SHKHLVLNYGVCVC----GDES   74 (258)
T ss_pred             CCCCcccchhheeeeecc-cccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-CCCChhheeeEEEe----CCCc
Confidence            368999999999998754 33       247777776543 3456788899999998 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|.+++...  ..+.....  ..+...+|+|+|..++   +|+|+||+||.
T Consensus        75 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---iH~dlkp~nil  132 (258)
T cd05078          75 IMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGL---THGNVCAKNVL  132 (258)
T ss_pred             EEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCccceEE
Confidence            9999999999999999632  23333322  2367778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.73  E-value=6.3e-17  Score=123.25  Aligned_cols=127  Identities=20%  Similarity=0.247  Sum_probs=101.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..|.+.+.+|+|+||.||.+....    ..+..+++|.+.... .....+.+|+.++..+ +|+|++++++.+..    .
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVE----G   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec----C
Confidence            468999999999999999997521    034568899887543 3456789999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC--------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD--------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++++|||+++|+|.+++...              ..+....  ...+.+.+|+|+|..|+   +|+|++|+||.
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i---~H~dlkp~Nil  152 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNCL  152 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccCcceEE
Confidence            8899999999999999998521              1232222  22367778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.73  E-value=4.9e-17  Score=123.26  Aligned_cols=126  Identities=23%  Similarity=0.282  Sum_probs=101.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC-----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN-----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..|++.+.||+|+||.||.+.... .+     ..+++|.+...  ......+.+|+.++..+ +|+|++++++.+..   
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~---   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTG-PNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTK---   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEec-CCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcC---
Confidence            358899999999999999998754 33     57899988653  23455688999999998 99999999999987   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                       ....+++|||+++|+|.+++...                 ..+....  ...+.+.+|+|+|..++   +|+|++|+||
T Consensus        80 -~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i---~H~dlkp~Ni  155 (283)
T cd05048          80 -EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF---VHRDLAARNC  155 (283)
T ss_pred             -CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccccceE
Confidence             78899999999999999998621                 1122221  23377788999999998   9999999997


Q ss_pred             c
Q psy9091         174 T  174 (176)
Q Consensus       174 ~  174 (176)
                      -
T Consensus       156 l  156 (283)
T cd05048         156 L  156 (283)
T ss_pred             E
Confidence            3

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.73  E-value=7.5e-17  Score=121.34  Aligned_cols=126  Identities=19%  Similarity=0.205  Sum_probs=101.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ++|+..+.||+|+||.||++.... .+   ..+++|.+...  ......+..|+.++..+ +|+|++++.+.+..    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   78 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKM-PGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTK----F   78 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEec-CCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEcc----C
Confidence            468889999999999999998764 33   37899988754  23456788999999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++++|.+++..  ........  ...+...+++++|..++   +|+|++|+||-
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~dlkp~Nil  139 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY---VHRDLAARNIL  139 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhhEE
Confidence            889999999999999999862  22333222  22366778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.73  E-value=3.5e-17  Score=123.01  Aligned_cols=126  Identities=18%  Similarity=0.245  Sum_probs=103.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|++.+.||+|+||.||++.+.. .+..+++|.+...    ......+.+|+.+++.+ +|+|++++++.+..    .+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~   75 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLL-DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIE----DN   75 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecC-CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEe----CC
Confidence            358888999999999999999877 7889999987653    23456788999999998 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC-----CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-----DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++++|.+++..     ...+.....  ..++..+|+|+|..|+   +|+|++|+||-
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~p~nil  138 (267)
T cd08229          76 ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV---MHRDIKPANVF  138 (267)
T ss_pred             eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            89999999999999998751     222332222  2266778999999998   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0607|consensus

Probab=99.73  E-value=3e-18  Score=128.97  Aligned_cols=129  Identities=16%  Similarity=0.243  Sum_probs=107.9

Q ss_pred             CCCCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          38 CGDRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        38 ~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.+-|++. +.||+|+|+.|-.|.... ++..+|+|++.+.+ ..+..+.+|+.++..+.+|+||++++.+|++    +.
T Consensus        75 F~d~YkLt~e~LGeGAyasVqtcv~i~-t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd----d~  149 (463)
T KOG0607|consen   75 FEDMYKLTSELLGEGAYASVQTCVSIQ-TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED----DT  149 (463)
T ss_pred             HHHHHHhHHHHhcCccceeeeeeeeec-cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc----cc
Confidence            34456665 789999999999999888 88999999998875 3577899999999998899999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CC--CCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PD--ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~--~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|||||-+.||+|..-|+ ..  .+.+...-...+..+|.++|.+||   .|||+||+||.
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgI---AHRDlKPENiL  208 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGI---AHRDLKPENIL  208 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCc---ccccCCcccee
Confidence            9999999999999998886 22  222222223366778999999999   99999999985

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.8e-17  Score=122.84  Aligned_cols=125  Identities=26%  Similarity=0.457  Sum_probs=105.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +|.+.+.||.|++|.||++.+.. .+..+++|.+....  .....+..|+.+++.+ +|+|++++.+.+..    ...++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~   75 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKR-TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLK----GSKLW   75 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECC-CCeEEEEEEeeccccchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEE----CCeEE
Confidence            58888999999999999999987 78899999987542  3445688899999999 89999999999988    78999


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++++|.+++.....+......  .+...++.++|..++   +|+|++|+||-
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~ni~  130 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGK---IHRDIKAANIL  130 (274)
T ss_pred             EEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            999999999999999754444433322  267778999999998   99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.73  E-value=1.1e-16  Score=121.90  Aligned_cols=133  Identities=20%  Similarity=0.301  Sum_probs=103.3

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +....++|++.+.||+|+||.||++....    .....+++|.+...  ......+.+|+.++..+.+|+|++++++.+.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            34455679999999999999999998753    02367899988753  2344568889999998767999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCC
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALD  169 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~  169 (176)
                      .    ...++++|||+++|+|.+++...                 ..+....  ...+...+|+|+|..++   +|+|++
T Consensus        87 ~----~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i---vH~dlk  159 (293)
T cd05053          87 Q----EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC---IHRDLA  159 (293)
T ss_pred             C----CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc---cccccc
Confidence            8    78899999999999999998521                 1122111  22366778999999998   999999


Q ss_pred             CCCcc
Q psy9091         170 TQNVT  174 (176)
Q Consensus       170 ~~nv~  174 (176)
                      |+||.
T Consensus       160 p~Nil  164 (293)
T cd05053         160 ARNVL  164 (293)
T ss_pred             eeeEE
Confidence            99973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.73  E-value=6.6e-17  Score=124.68  Aligned_cols=133  Identities=20%  Similarity=0.290  Sum_probs=103.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      +..+.++|.+.+.||+|+||.||.+....      .....+++|.+...  ......+..|+.+++.+.+|+||+++++.
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            35556789999999999999999997531      02346899987753  23455688899999988569999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +..    ...++++|||+++|+|.+++....                 ......  ...+...+|.|+|..|+   +|+|
T Consensus        87 ~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi---~H~d  159 (314)
T cd05099          87 CTQ----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC---IHRD  159 (314)
T ss_pred             Ecc----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe---eecc
Confidence            987    778999999999999999985211                 111111  12367778999999998   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      ++|+||-
T Consensus       160 lkp~Nil  166 (314)
T cd05099         160 LAARNVL  166 (314)
T ss_pred             ccceeEE
Confidence            9999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=1.1e-16  Score=121.92  Aligned_cols=125  Identities=20%  Similarity=0.218  Sum_probs=100.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|.+.+.||+|+||.||.|.+.. .+..+++|.+....  .....+.+|+.+++.+ +|+|++++++.+..    ....
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~----~~~~   78 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRI-NGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHT----KETL   78 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcC-CCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEec----CCeE
Confidence            569999999999999999999887 78899999986542  2233567899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |++|||++ +++.+++..  ........  ...++..+|.|+|..++   +|+||+|+||-
T Consensus        79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dlkp~Nil  135 (291)
T cd07870          79 TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI---LHRDLKPQNLL  135 (291)
T ss_pred             EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHHEE
Confidence            99999996 677766642  22222222  22377778999999988   99999999973

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=6.3e-17  Score=122.31  Aligned_cols=126  Identities=21%  Similarity=0.408  Sum_probs=103.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhcc--CCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|+..+.||+|+||.||+|.+.. .+..+++|.++..  ......+.+|+.+++.+.  .|+|++++++.+..    ...
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~----~~~   76 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVP-TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK----GPR   76 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcC-CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee----CCE
Confidence            47888999999999999999977 7889999988653  234566888999999883  39999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++++|.++++...........  .+...+|.++|..|+   +|+|++|+||.
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i---~H~dl~p~ni~  133 (277)
T cd06917          77 LWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGV---IHRDIKAANIL  133 (277)
T ss_pred             EEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcCHHHEE
Confidence            99999999999999998754444333222  266678999999998   99999999974

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=3.6e-17  Score=127.58  Aligned_cols=130  Identities=22%  Similarity=0.301  Sum_probs=102.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      .++|.+.+.||+|+||.||++.+.. .+..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+....  ..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTR-LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccc
Confidence            4579999999999999999999887 78899999987532   2345577899999999 9999999998876421  11


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++++++ +++|.+++...........  ..+.+.+|.|+|..|+   +|+||||+||.
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vHrdikp~Nil  150 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGI---IHRDLKPSNVA  150 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecccCChhhEE
Confidence            24579999988 6899888864444443332  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.72  E-value=9.7e-17  Score=119.88  Aligned_cols=125  Identities=21%  Similarity=0.252  Sum_probs=101.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|++.+.||+|+||.||++.+..  +..+++|.+.........+..|+.+++.+ .|+|++++++.+..    ....++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~--~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~~   76 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE--KRKVAIKTIREGAMSEEDFIEEAQVMMKL-SHPKLVQLYGVCTE----RSPICL   76 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC--CCeEEEEECCCCCCCHHHHHHHHHHHHhC-CCCCeeeEEEEEcc----CCceEE
Confidence            358999999999999999998853  56789998875543445688999999999 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.+++..  ..........  .+...+++++|..++   +|+|++|+||.
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~h~dl~p~ni~  132 (256)
T cd05112          77 VFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV---IHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccccceEE
Confidence            9999999999999862  2233332222  255677999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.72  E-value=9.4e-17  Score=121.63  Aligned_cols=125  Identities=20%  Similarity=0.231  Sum_probs=100.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +.|+..+.||+|+||.||+|.+.. ++.    .+|+|.+...  ......+..|+.++..+ .|+|++.+++.+..    
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----   80 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIP-DGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLT----   80 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEec-CCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC----
Confidence            468999999999999999998765 443    4799988653  33456788899999998 99999999998865    


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++||+++|+|.+++..  .........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---iH~dlkp~Nil  141 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL---VHRDLAARNVL  141 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccccceEE
Confidence             457899999999999999863  233333332  3377888999999998   99999999974

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.72  E-value=1.8e-17  Score=126.64  Aligned_cols=129  Identities=19%  Similarity=0.307  Sum_probs=105.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+.+.|.....||+|+||.||.+.... ++..+++|.+.... .....+.+|+.++..+ +|+|++++++.+..    ++
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~----~~   92 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKH-TGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-HHENVVDMYNSYLV----GD   92 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECC-CCCEEEEEEEecchHHHHHHHHHHHHHHHhC-CCCcHHHHHHheec----CC
Confidence            344556777889999999999999877 78899999887543 3455688999999998 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++++|.+++...........  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        93 ~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~Nil  150 (292)
T cd06658          93 ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGV---IHRDIKSDSIL  150 (292)
T ss_pred             eEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEE
Confidence            99999999999999998864444443332  2366778999999998   99999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.72  E-value=7.5e-17  Score=123.38  Aligned_cols=127  Identities=20%  Similarity=0.236  Sum_probs=99.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe--EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK--KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|++.+.||+|+||.||++.... .+.  .+++|.+...  ......+..|+.++..+.+|||++++++.+..    .+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKK-DGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN----RG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecC-CCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc----CC
Confidence            468999999999999999998865 443  4678877642  33456788899999888679999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++....                 ...+..  ...+...+|+++|..|+   +|+||||+||.
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---vH~dlkp~Nil  151 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF---IHRDLAARNVL  151 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCcCCcceEE
Confidence            8999999999999999985211                 122221  22266678999999988   99999999984

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.72  E-value=8.3e-17  Score=122.03  Aligned_cols=124  Identities=19%  Similarity=0.261  Sum_probs=101.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|++.+.||+|++|.||++.+.. ++..+++|.+....   .....+..|+.++..+ +|+|++++++.+..    ++.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   74 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKK-TGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQ----ESRL   74 (285)
T ss_pred             CceEeeEecccCceEEEEEEECC-CCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEee----CCeE
Confidence            38899999999999999999987 78899999886532   2345678899999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC----CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP----DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||++ ++|.+++..    ...+.....  ..+...+|+|+|..++   +|+|++|+||.
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dl~p~nil  133 (285)
T cd07861          75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV---LHRDLKPQNLL  133 (285)
T ss_pred             EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCCHHHEE
Confidence            99999998 688888752    233333322  3377788999999998   99999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.72  E-value=1.1e-16  Score=120.51  Aligned_cols=123  Identities=20%  Similarity=0.253  Sum_probs=100.8

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      .....||+|+||.||++.+.. .+..+++|.+.... .....+.+|+.++..+ +|+||+++++.+..    ++.+++++
T Consensus        11 ~~~~~lg~g~~g~v~~~~~~~-~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~   84 (268)
T cd06624          11 GERVVLGKGTYGIVYAARDLS-TQVRIAIKEIPERDSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSE----NGFFKIFM   84 (268)
T ss_pred             CceEEEecCCceEEEEeEecC-CCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-CCCCeeeeeeeecc----CCEEEEEE
Confidence            334589999999999999877 77889999887643 3556788999999999 99999999999988    78999999


Q ss_pred             ecCCCCChhhhcCC--CCC--ChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALKP--DEL--DLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~~--~~~--~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++++|.+++..  ...  +.....  ..+...+|+|+|..++   +|+|++|+||.
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~h~dl~p~nil  140 (268)
T cd06624          85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI---VHRDIKGDNVL  140 (268)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEE
Confidence            99999999999863  222  332222  2377788999999998   99999999974

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.72  E-value=7.7e-17  Score=123.65  Aligned_cols=133  Identities=18%  Similarity=0.296  Sum_probs=102.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      +....+.|.+.+.||+|+||.||.+.+..      ..+..+++|.+...  ......+.+|+.++..+.+|+||+++++.
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            34456679999999999999999997521      02347899988653  33456788999999987689999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCC-C----------------CChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPD-E----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +..    ...++++|||+++|+|.+++... .                ......  ...+...+|+|+|..|+   +|+|
T Consensus        90 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi---vH~d  162 (304)
T cd05101          90 CTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC---IHRD  162 (304)
T ss_pred             Eec----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe---eecc
Confidence            988    78899999999999999998621 1                111111  12266778999999998   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      +||+||-
T Consensus       163 lkp~Nil  169 (304)
T cd05101         163 LAARNVL  169 (304)
T ss_pred             cccceEE
Confidence            9999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.72  E-value=6.5e-17  Score=122.35  Aligned_cols=129  Identities=19%  Similarity=0.218  Sum_probs=102.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC---CCCeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ---NGNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~---~~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..|++.+.||+|+||.||++.+..   ..+..+|+|.+.....  ....+..|+.+++.+ .|+|++++++.+....  .
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~--~   80 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPG--G   80 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCC--C
Confidence            458888999999999999998643   0357899999876543  356789999999999 9999999998876521  4


Q ss_pred             ceEEEEEecCCCCChhhhcCCCC--CChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDE--LDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++++|.+++....  .+......  .+...+|+++|..|+   +|+|++|+||-
T Consensus        81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~nil  141 (284)
T cd05038          81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY---IHRDLAARNIL  141 (284)
T ss_pred             CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHhEE
Confidence            57899999999999999996322  44433222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.72  E-value=1.5e-16  Score=118.88  Aligned_cols=125  Identities=17%  Similarity=0.230  Sum_probs=103.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.+|.+.... .+..+++|.+...   ......+.+|+.+++.+ +|+|++++.+.+..    .+..
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   74 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKE-DGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEE----NGNL   74 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcC-CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecC----CCeE
Confidence            48899999999999999999987 7889999988753   23455788999999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC-C--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-D--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||+++++|.+++.. .  ..+.....  ..+...++.++|..++   +|+|++|+||-
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~~l~~~nil  133 (256)
T cd08218          75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI---LHRDIKSQNIF  133 (256)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            999999999999998862 1  23333222  2377788999999988   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.6e-16  Score=119.47  Aligned_cols=128  Identities=16%  Similarity=0.312  Sum_probs=102.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..|.+.+.||+|+||.||.+.+.. ++..+++|.+...      ......+.+|+.+++.+ +|+|++++++.+...  .
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~--~   77 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDAD-TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDP--E   77 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcC-CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcC--C
Confidence            359999999999999999999887 7889999987532      23445788999999999 999999999988652  1


Q ss_pred             cceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++++||+++++|.+++.. ...+.....  ..++..+|.++|..++   +|+|++|+||-
T Consensus        78 ~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i---~H~dl~p~ni~  138 (264)
T cd06653          78 EKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMI---VHRDIKGANIL  138 (264)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            3568999999999999999863 333333322  2366778999999998   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.72  E-value=5.8e-17  Score=121.81  Aligned_cols=125  Identities=18%  Similarity=0.334  Sum_probs=101.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----------hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      +|.+...||+|+||.||.|.+.. .+..+++|.+....          .....+.+|+.++..+ +|+|++++++.+.. 
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-   77 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNAS-SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLD-   77 (267)
T ss_pred             CccccceeecCCCeEEEEEEecC-CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEe-
Confidence            36778899999999999999876 77889999876421          1235678899999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....+++|||+++++|.+++.. ...+....  ...+...+|+++|..++   +|+|++|+||.
T Consensus        78 ---~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i---vH~di~p~nil  138 (267)
T cd06628          78 ---ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI---IHRDIKGANIL  138 (267)
T ss_pred             ---CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCc---ccccCCHHHEE
Confidence               7889999999999999999862 33333322  23366778999999988   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.72  E-value=1.1e-16  Score=121.23  Aligned_cols=126  Identities=19%  Similarity=0.242  Sum_probs=100.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...|++.+.||+|+||.||++.+.. .+.    .+++|.+....  .....+.+|+.++..+ +|+|++++++.+..   
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~---   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIP-EGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS---   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEec-CCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec---
Confidence            3568999999999999999998754 433    68899876542  3456788999999999 99999999998865   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+++|||+++|+|.+++..  ...+......  .+...+|+|+|..++   +|+|++|+||.
T Consensus        81 --~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---~H~di~p~nil  141 (279)
T cd05057          81 --SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL---VHRDLAARNVL  141 (279)
T ss_pred             --CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE---EecccCcceEE
Confidence              678999999999999999863  2333333222  267778999999888   99999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0577|consensus

Probab=99.72  E-value=1e-18  Score=140.36  Aligned_cols=129  Identities=24%  Similarity=0.334  Sum_probs=106.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .+|...|.-++.||.|+||-||.+.+.. +.+.||||-+.-..    +.-+.+..|+..+..+ .|||.+.+.|+|..  
T Consensus        22 ~DPEklf~dLrEIGHGSFGAVYfArd~~-n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLr--   97 (948)
T KOG0577|consen   22 DDPEKLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLR--   97 (948)
T ss_pred             CCHHHHHHHHHHhcCCccceeEEeeccC-ccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeec--
Confidence            5666678889999999999999999988 88899999887542    2334588999999999 99999999999998  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC--C-CCCChhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK--P-DELDLDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~--~-~~~~~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....|||||||- |+..|+|.  . .+-+......+ +.+.+|+|||+.+.   ||||+|.+||.
T Consensus        98 --e~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~---IHRDiKAGNIL  158 (948)
T KOG0577|consen   98 --EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR---IHRDIKAGNIL  158 (948)
T ss_pred             --cchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH---HhhhccccceE
Confidence              788999999997 78888876  2 22222223334 77889999999999   99999999984

>KOG4278|consensus

Probab=99.72  E-value=7.5e-18  Score=136.24  Aligned_cols=134  Identities=13%  Similarity=0.216  Sum_probs=116.3

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ..+.|.-.+.......+||-|.||.||.|.|+. -...+|+|.++.+.+...+|..|..+|+.+ .|||+|+++|.|.. 
T Consensus       258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk-yslTvAVKtLKEDtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~-  334 (1157)
T KOG4278|consen  258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTH-  334 (1157)
T ss_pred             CcchhhccchheeeeeccCCCcccceeeeeeec-cceeeehhhhhhcchhHHHHHHHHHHHHhh-cCccHHHHhhhhcc-
Confidence            557787777888889999999999999999987 778999999988878889999999999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-CCCCChhh---Hhhh-hhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-PDELDLDN---LQDC-GDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~---~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                         ..++|||+|||..|+|.|+|+ .+......   +++. |+.-+|+||-.++.   |||||+.+|-
T Consensus       335 ---EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF---IHRDLAARNC  396 (1157)
T KOG4278|consen  335 ---EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNC  396 (1157)
T ss_pred             ---CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhc
Confidence               889999999999999999998 33333322   2222 66778999999999   9999999885

>KOG0576|consensus

Probab=99.72  E-value=7.9e-19  Score=142.16  Aligned_cols=131  Identities=27%  Similarity=0.470  Sum_probs=114.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++.++|.++..+|.|++|.||++.+.. .++..|+|.++... +....++.|+-+++.+ +|+||+.+++.|..    .
T Consensus        11 rnP~ddyellqrvgsgTygdvyKaRd~~-s~elaavkvVkLep~dd~~~iqqei~~~~dc-~h~nivay~gsylr----~   84 (829)
T KOG0576|consen   11 RNPQDDYELLQRVGSGTYGDVYKARDKR-SGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLR----R   84 (829)
T ss_pred             cCCccchhheeeecCCcccchhhhcccc-cCchhhheeeeccCCccccccccceeeeecC-CCcChHHHHhhhhh----h
Confidence            4788899999999999999999999988 89999999999864 3556678899999998 99999999999998    8


Q ss_pred             ceEEEEEecCCCCChhhhcC--CCCCChhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCccc
Q psy9091         115 SEIWFVMQREAEMPPPRALK--PDELDLDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVTS  175 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~~  175 (176)
                      ..+|+.||||.+|+|.+...  -.+.+.+..+.| +.+++++|+|+.|.   +|||+|..|+.+
T Consensus        85 dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk---~hRdiKGanill  145 (829)
T KOG0576|consen   85 DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGK---IHRDIKGANILL  145 (829)
T ss_pred             cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCc---ccccccccceee
Confidence            89999999999999999876  334455555666 66889999999999   999999999853

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.72  E-value=9.1e-17  Score=120.78  Aligned_cols=124  Identities=23%  Similarity=0.325  Sum_probs=97.1

Q ss_pred             EEeeEEeecCCeeEEEEEec--C-CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          43 ELGYVIGSGVCADVYEALDT--Q-NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~--~-~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ++.+.||.|+||.||+|.+.  . +.+..|++|.+...  ......+..|+..+..+ +|+||+++++.+..    .+.+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~----~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIE----NEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEES----SSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccc----cccc
Confidence            56789999999999999987  1 03468999999653  33467899999999999 99999999999996    6779


Q ss_pred             EEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|.++|...   ..+.....  ..++..+|+|||..++   +|+++.++||-
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i---iH~~l~~~nil  135 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI---IHGNLSPSNIL  135 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE---EEST-SGGGEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccc
Confidence            9999999999999999732   33333322  2277778999999998   99999999974

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.72  E-value=5.9e-17  Score=122.90  Aligned_cols=125  Identities=17%  Similarity=0.245  Sum_probs=102.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|++.+.||+|+||.||++.+.. .+..+++|.+....   .....+..|+.++..+ +|+|++++++.+..    ....
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   75 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKE-TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRR----KKRL   75 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECC-CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhccc----CCeE
Confidence            58999999999999999999977 78899999875432   2345678899999998 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++++.|.++.. ....+.....  ..++..+|+|+|..++   +|+|++|+||.
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~h~~l~p~ni~  132 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI---IHRDIKPENIL  132 (286)
T ss_pred             EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            99999999998887765 3333433322  2367778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.72  E-value=4.3e-17  Score=126.50  Aligned_cols=120  Identities=18%  Similarity=0.279  Sum_probs=97.6

Q ss_pred             eEEeec--CCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSG--VCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G--~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      ..||+|  +||.||.+.+.. .+..+|+|.+...   ....+.+.+|+.+++.+ +|+||+++++.+..    ++..+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~----~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTP-TGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTT----GSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEcC-CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEec----CCceEEE
Confidence            356666  999999999987 7899999998753   23456788899999888 99999999999998    7889999


Q ss_pred             EecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||+++|+|.++++.   ...+....  ...+...+|+|+|..++   +|+|+||+||-
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---vHrDlkp~Nil  133 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY---IHRNIKASHIL  133 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            999999999999862   22333332  23367778999999988   99999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.72  E-value=6.3e-17  Score=126.83  Aligned_cols=130  Identities=18%  Similarity=0.252  Sum_probs=100.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      ..++|++.+.||+|+||.||.+.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+....  .
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecC-CCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence            44679999999999999999999877 7889999988753   23445678899999998 9999999999886522  1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....+++|||+++ ++.+.+.. ..+....  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        93 ~~~~~~lv~e~~~~-~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~gi---vHrDikp~Nil  151 (355)
T cd07874          93 EFQDVYLVMELMDA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  151 (355)
T ss_pred             ccceeEEEhhhhcc-cHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHHEE
Confidence            12458999999974 67666642 2232222  23377788999999998   99999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.72  E-value=1.1e-16  Score=121.36  Aligned_cols=124  Identities=19%  Similarity=0.247  Sum_probs=103.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.||++.+.. .+..+++|.+....   .....+..|+.+++.+ +|+|++++++.+..    +..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~   74 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE-TGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPH----GSGF   74 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC-CCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEec----CCee
Confidence            48899999999999999999987 78899999987542   3456788999999999 89999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+ +++|.+++.  ....+.....  ..++..+|+|+|..++   +|+|++|+||.
T Consensus        75 ~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~  131 (286)
T cd07832          75 VLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI---MHRDLKPANLL  131 (286)
T ss_pred             EEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCcCHHHEE
Confidence            9999999 999999985  2233333322  2367778999999998   99999999974

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.72  E-value=6.3e-17  Score=121.89  Aligned_cols=120  Identities=17%  Similarity=0.186  Sum_probs=92.8

Q ss_pred             EEeecCCeeEEEEEecCC-CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          47 VIGSGVCADVYEALDTQN-GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      .||+|+||.||+|..... ....+++|.+...  ......+.+|+.+++.+ +|+||+++++.+..    ....+++|||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~----~~~~~lv~e~   76 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIE----SIPYLLVLEF   76 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECC----CCceEEEEEe
Confidence            589999999999965320 2346888877643  22345678899999998 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCCCCC------Chhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPDEL------DLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~~~------~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++.....      +...  ....+...+|+|+|..++   +|+|+||+||.
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  132 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF---IHSDLALRNCQ  132 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE---ecccccHhheE
Confidence            999999999862211      1111  122367778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=7e-17  Score=126.86  Aligned_cols=120  Identities=14%  Similarity=0.129  Sum_probs=97.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|.+.+.||+|+||.||++.+.. .+..+|+|.....     ....|+.++..+ +|+||+++++.+..    ....++
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~valK~~~~~-----~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~l  134 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPG-QPDPVVLKIGQKG-----TTLIEAMLLQNV-NHPSVIRMKDTLVS----GAITCM  134 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECC-CCceEEEEeCCcc-----ccHHHHHHHHhC-CCCCCcChhheEEe----CCeeEE
Confidence            359999999999999999999987 7788999975432     235688899998 99999999999998    788999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||++. |+|.+++..  ..........  .++..+|.|+|..++   ||+||||+||.
T Consensus       135 v~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~Nil  189 (357)
T PHA03209        135 VLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRI---IHRDVKTENIF  189 (357)
T ss_pred             EEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            999996 688888752  2333333222  377788999999998   99999999984

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.72  E-value=1.1e-16  Score=120.52  Aligned_cols=126  Identities=24%  Similarity=0.356  Sum_probs=100.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCC---CeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNG---NKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ...|.+.+.||+|+||.||+|.+.. .   ...+++|.....  ......+.+|+.+++.+ +|+|++++++.+..    
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMS-PENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE----   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEec-CCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC----
Confidence            3468999999999999999998754 3   246889987654  33456789999999999 99999999998865    


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +..+++|||+++|+|.+++..  ...+.....  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        79 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---~H~dl~p~nil  139 (270)
T cd05056          79 -NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF---VHRDIAARNVL  139 (270)
T ss_pred             -CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccChheEE
Confidence             557899999999999999963  223333322  2367778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0199|consensus

Probab=99.72  E-value=1.9e-18  Score=140.84  Aligned_cols=127  Identities=17%  Similarity=0.175  Sum_probs=105.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +.....+.+.||+|.||.||+|.|.. .+   ..||+|+++....  ....|.+|+.+|..+ +|+|++++||...+   
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~-psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~---  182 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQ-PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD---  182 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccC-CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc---
Confidence            34456777999999999999999976 43   3799999987642  567899999999999 99999999999976   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChh--hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLD--NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~--~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +.+.+|||+++.|+|.+.|+.   ..+...  +.+..|+..+|+||-.+++   |||||+.+|+.
T Consensus       183 --qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl---vHRDLAARNll  244 (1039)
T KOG0199|consen  183 --QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL---VHRDLAARNLL  244 (1039)
T ss_pred             --chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh---hhhhhhhhhhe
Confidence              789999999999999999973   222222  2234488889999999999   99999999984

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.72  E-value=2.2e-16  Score=117.97  Aligned_cols=126  Identities=21%  Similarity=0.206  Sum_probs=101.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|++.+.||.|++|.||.+.+.. .+..+++|.+...   ......+..|+.+++.+ +|+|++++.+.+...   ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~---~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT-DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGE---DGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC-CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCC---CCEE
Confidence            38999999999999999999977 7789999998653   23455688899999998 999999999887542   4568


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++..   ...+....  ...+...+++++|..|+   +|+|++|+||.
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i---~H~di~p~nil  134 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI---LHRDLKTQNVF  134 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCchhEE
Confidence            999999999999999862   22333322  22366778999999998   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.72  E-value=1.2e-16  Score=120.41  Aligned_cols=127  Identities=18%  Similarity=0.212  Sum_probs=95.9

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCe--EEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcc
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNK--KVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHS  115 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~--~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~  115 (176)
                      .+.+.||+|+||.||+|.+.. .+.  .+|+|.++..   ......+..|+.+++.+ +|+||+++++.+....  ....
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQ-DDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             ccccccCcccCceEEEeEEcc-CCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCC
Confidence            467889999999999999865 443  6899987653   33466788999999999 9999999998764321  1123


Q ss_pred             eEEEEEecCCCCChhhhcCC-------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++|+|.+++..       ...+....  ...+.+.+|+|+|..++   +|+|+||+||.
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil  144 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF---IHRDLAARNCM  144 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhheE
Confidence            57999999999999888731       11223222  22266778999999988   99999999984

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.72  E-value=6.9e-17  Score=120.69  Aligned_cols=119  Identities=16%  Similarity=0.166  Sum_probs=93.4

Q ss_pred             eEEeecCCeeEEEEEecCCCC----------eEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          46 YVIGSGVCADVYEALDTQNGN----------KKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~----------~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.||+|+||.||++.+.. .+          ..+++|.+.........+.+|+.+++.+ +|+|++++++.+..     .
T Consensus         1 ~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-----~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRV-QSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-SHKHLVKLYGVCVR-----D   73 (259)
T ss_pred             CcccccccceEEEEEEec-cCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-CCcchhheeeEEec-----C
Confidence            368999999999999865 44          2467777665433356788999999998 99999999998865     4


Q ss_pred             eEEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++|+|.+++...  ..+.....  ..+...+|+|+|..++   +|+||||+||.
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dlkp~Nil  133 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL---VHGNVCGKNIL  133 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe---ecccCccceEE
Confidence            468999999999999998732  33333322  2267778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1152|consensus

Probab=99.72  E-value=2.1e-17  Score=132.32  Aligned_cols=132  Identities=16%  Similarity=0.160  Sum_probs=107.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhcc--CCCCccee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLS--QHSNIPDF  103 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~--~h~niv~~  103 (176)
                      .......|+.++.+|+|+||+|+.|.++. +...|++|.|.+..         +....+-.|+.+|..+.  .|+||+++
T Consensus       556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~-n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl  634 (772)
T KOG1152|consen  556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKE-NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL  634 (772)
T ss_pred             eecccccceeeeeccccccceEEEeeecc-cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence            34445569999999999999999999988 67789999987642         23456778999999983  28999999


Q ss_pred             ceeEEeccCCcceEEEEEecC-CCCChhhhcC-CCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQRE-AEMPPPRALK-PDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~-~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++.|++    +++.||+||-. +|-+|+++|. ....+++.  ..+.|+..+++.+|..||   ||||+|.+||.
T Consensus       635 LdfFEd----dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~i---vhrdikdenvi  702 (772)
T KOG1152|consen  635 LDFFED----DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGI---VHRDIKDENVI  702 (772)
T ss_pred             hheeec----CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCc---eecccccccEE
Confidence            999999    89999999965 4678899997 33333333  455699999999999999   99999999984

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.71  E-value=2.3e-16  Score=118.30  Aligned_cols=126  Identities=25%  Similarity=0.392  Sum_probs=104.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|++.+.||.|+||.||++.... .+..+++|.+...  ......+.+|+.+++.+ +|+|++++++.+..    .+..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   74 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLP-NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVV----GDEL   74 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcC-CCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEee----CCEE
Confidence            358999999999999999999877 7788999998653  23556789999999998 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||++++++|.++++.    ...+....  ...+...+++++|..|+   +|+|++|+||.
T Consensus        75 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i---~h~~l~p~ni~  134 (267)
T cd06610          75 WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ---IHRDIKAGNIL  134 (267)
T ss_pred             EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHhEE
Confidence            999999999999999862    22333222  22366778999999998   99999999985

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.71  E-value=8.8e-17  Score=121.00  Aligned_cols=121  Identities=19%  Similarity=0.176  Sum_probs=93.7

Q ss_pred             eEEeecCCeeEEEEEecCC-----------CCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          46 YVIGSGVCADVYEALDTQN-----------GNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~-----------~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +.||+|+||.||+|....+           ....+++|.+.... .....+..|+.++..+ +||||+++++.+..    
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~----   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-SHKHIVLLYGVCVR----   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEec----
Confidence            3689999999999975320           12357888876543 3455678888999998 99999999999987    


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||+++|+|..++..  ...+.....  ..+.+.+|+|+|..++   +|+|++|+||-
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~dlkp~Nil  137 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL---VHGNVCTKNIL  137 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe---ECCCCCcccEE
Confidence            6788999999999999888852  233433322  2377778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.71  E-value=1.3e-16  Score=124.12  Aligned_cols=133  Identities=19%  Similarity=0.282  Sum_probs=102.4

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC------CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN------GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~------~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      |.-...+|++.+.||+|+||.||.+.+...      ....+++|.+...  ......+..|+.+++.+.+|+||+++++.
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA   86 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence            444455799999999999999999976320      1236899987753  23456788999999998679999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +..    ...++++|||+++|+|.+++....                 ......  ...+...+|+|+|..|+   +|+|
T Consensus        87 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi---vH~d  159 (334)
T cd05100          87 CTQ----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC---IHRD  159 (334)
T ss_pred             Ecc----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe---eccc
Confidence            987    788999999999999999985211                 111111  12266778999999998   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      ++|+||-
T Consensus       160 lkp~Nil  166 (334)
T cd05100         160 LAARNVL  166 (334)
T ss_pred             cccceEE
Confidence            9999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.71  E-value=1.1e-16  Score=120.11  Aligned_cols=119  Identities=23%  Similarity=0.300  Sum_probs=93.7

Q ss_pred             EEeecCCeeEEEEEecCC-CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          47 VIGSGVCADVYEALDTQN-GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      .||+|+||.||.|.+... .+..+++|.+....  .....+.+|+.+++.+ +|+|++++++.+..     ...+++|||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-----~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-----EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-----CCeEEEEEe
Confidence            489999999999977520 34568999887542  3456688999999999 99999999998754     568999999


Q ss_pred             CCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++.  ....+.....  ..+...+|+|+|..|+   +|+||+|+||.
T Consensus        76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil  127 (257)
T cd05115          76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF---VHRDLAARNVL  127 (257)
T ss_pred             CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe---eecccchheEE
Confidence            99999999986  2333433322  2367778999999988   99999999983

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.71  E-value=1.2e-16  Score=119.34  Aligned_cols=125  Identities=19%  Similarity=0.283  Sum_probs=103.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|...+.||+|+||.||++.+.. .+..+++|.+...   ......+.+|+.+++.+ +|+|++++++.+..    ...+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~----~~~~   74 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS-DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQE----NGRL   74 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC-CCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheecc----CCeE
Confidence            48899999999999999999987 7888999998754   13345678899999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||+++++|.+++...   ..+.....  ..+...+|.|+|..++   +|+|++|+||.
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~H~dl~~~nil  133 (257)
T cd08225          75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI---LHRDIKSQNIF  133 (257)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCCHHHEE
Confidence            9999999999999998621   22333222  2266778999999998   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.71  E-value=1.3e-16  Score=120.15  Aligned_cols=129  Identities=19%  Similarity=0.282  Sum_probs=97.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTH  114 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~  114 (176)
                      |++.+.||+|+||.||.+....+  .+..+|+|.+...   ......+..|+.+++.+ +|+|++++++.+....  +..
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccC
Confidence            56788999999999999987541  2367999988753   23456789999999998 9999999999876521  112


Q ss_pred             ceEEEEEecCCCCChhhhcCC-------CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-------DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++|+|.+++..       ...+.....  ..+...+|+|+|..++   +|+|+||+||.
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i---~H~dlkp~Nil  145 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF---IHRDLAARNCM  145 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCe---eccccchheEE
Confidence            348999999999999988741       122322222  2366778999999988   99999999984

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.71  E-value=2.1e-16  Score=118.76  Aligned_cols=123  Identities=20%  Similarity=0.310  Sum_probs=100.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      |++.+.||+|+||.||++...  .+..+++|.+....       .....+.+|+.+++.+ +|+|++++++.+..    .
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~   74 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTN--QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLD----D   74 (265)
T ss_pred             ccccceEeccCCeEEEEEEEc--CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeec----C
Confidence            778899999999999999874  46789999886431       2234688899999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++++||+++++|.+++.. .....+..  ...+...+|+++|..++   +|+|++|+||.
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil  134 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCV---VHRDIKGNNVM  134 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcCHHhEE
Confidence            899999999999999999863 33333332  22367778999999998   99999999974

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.71  E-value=5e-17  Score=123.48  Aligned_cols=126  Identities=17%  Similarity=0.239  Sum_probs=102.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.|++.+.||+|+||.||++.+.. .+..+++|.+...  ......+.+|+.++..+ +|+|++++++.+..    .+..
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~   78 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIP-TGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLN----ENNI   78 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcC-CCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEec----CCEE
Confidence            468889999999999999999987 7888999987654  23456789999999998 99999999999998    7899


Q ss_pred             EEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++.. ........  ...+...+|.|+|. .++   +|+|++|+||.
T Consensus        79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i---~H~dl~p~nil  136 (284)
T cd06620          79 CMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRI---MHRDIKPSNIL  136 (284)
T ss_pred             EEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCe---eccCCCHHHEE
Confidence            999999999999998863 22333222  22256677999996 576   99999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.71  E-value=4.2e-17  Score=123.33  Aligned_cols=127  Identities=22%  Similarity=0.277  Sum_probs=101.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+|.+.+.||+|+||.||++....    ..+..+++|.+....  .....+.+|+.++..+ +|+|++++++.+..    
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTE----   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEec----
Confidence            458889999999999999997643    024689999987642  2456789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCC---------------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDE---------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||+++|+|.++|....               ......  ...+...+++++|..|+   +|+|++|+||-
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~h~dlkp~nil  154 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF---VHRDLATRNCL  154 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe---eccccccceEE
Confidence            788999999999999999986211               111111  12266778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.71  E-value=1.8e-16  Score=120.62  Aligned_cols=130  Identities=21%  Similarity=0.291  Sum_probs=95.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhcc--CCCCcceeceeEEecc-CCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKH-QTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~-~~~  114 (176)
                      +|.+.+.||+|+||.||++.+....+..+|+|.+....   .....+.+|+.++..+.  .||||+++++.+.... ...
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            58999999999999999999854145789999887532   22344566777776652  6999999999885321 114


Q ss_pred             ceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||++ ++|.+++..   ...+....  ...+...+|.|+|..++   +|+|+||+||.
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---iH~dlkp~Nil  142 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNIL  142 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEE
Confidence            56999999997 689888852   22333222  22377788999999998   99999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.71  E-value=1.1e-16  Score=125.81  Aligned_cols=130  Identities=18%  Similarity=0.240  Sum_probs=100.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      ..++|.+.+.||+|+||.||.+.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+|++.+++.+....  .
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAI-LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECC-CCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence            34679999999999999999999887 7889999998753   23445678899999998 9999999998876421  1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+|+||||++ ++|.+.+... .+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus       100 ~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  158 (364)
T cd07875         100 EFQDVYIVMELMD-ANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  158 (364)
T ss_pred             ccCeEEEEEeCCC-CCHHHHHHhc-CCHHHHHHHHHHHHHHHHHHhhCCe---ecCCCCHHHEE
Confidence            1245899999997 4677776422 232222  23377788999999998   99999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4257|consensus

Probab=99.71  E-value=2.5e-17  Score=133.13  Aligned_cols=123  Identities=24%  Similarity=0.368  Sum_probs=101.7

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCC--C--eEEEEEEeec--ChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNG--N--KKVSIKVQKI--NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~--~--~~~aik~i~~--~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .++.+.||.|.||.||.|.+.. .  |  -.||+|..+.  .++..+.|+.|..+|+.+ +||||++++|.+..     +
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~-~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e-----~  463 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTD-PEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVE-----Q  463 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecc-cccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeeec-----c
Confidence            3445899999999999998864 3  2  3588888765  356678899999999999 99999999999976     8


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.|||||.++-|.|..||+.  ..++...+  +..+..-+|+||++...   |||||+.+||.
T Consensus       464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrf---VHRDIAaRNiL  523 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRF---VHRDIAARNIL  523 (974)
T ss_pred             ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhch---hhhhhhhhhee
Confidence            89999999999999999983  33333222  23388889999999999   99999999985

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.7e-16  Score=116.22  Aligned_cols=125  Identities=22%  Similarity=0.386  Sum_probs=104.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|++|.+|.+.... .+..+++|.+....   .....+..|+.++..+ +|+|++++++.+..    .+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   74 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLE-TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIET----SDSL   74 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcC-CCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEe----CCEE
Confidence            48889999999999999999877 77899999987653   3566789999999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++.. ...+....  ...+...++.++|..|+   +|+|++|+||.
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~  131 (254)
T cd06627          75 YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV---IHRDIKAANIL  131 (254)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCHHHEE
Confidence            999999999999999863 33343332  22366778999999998   99999999974

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.71  E-value=3.4e-16  Score=119.14  Aligned_cols=127  Identities=14%  Similarity=0.184  Sum_probs=101.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|...+.||.|++|.||.+.+.. .+..+++|.+....  .....+.+|+.+++.+ +|+||+++++.+....  .+.++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~--~~~~~   77 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKN-TGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDES--SSSIG   77 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECC-CCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccC--CCeEE
Confidence            58899999999999999999987 78899999987542  3456688999999998 9999999999886521  45689


Q ss_pred             EEEecCCCCChhhhcC---C--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK---P--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~---~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|.+++.   .  ........  ...+...+|+|+|..++   +|+|++|+||.
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i---~H~dl~~~nil  137 (287)
T cd06621          78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI---IHRDIKPSNIL  137 (287)
T ss_pred             EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            9999999999988764   1  12222221  23367778999999998   99999999974

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.71  E-value=1.7e-16  Score=120.54  Aligned_cols=129  Identities=19%  Similarity=0.252  Sum_probs=97.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhcc--CCCCcceeceeEEecc-CCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKH-QTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~-~~~  114 (176)
                      +|.+.+.||+|+||.||++.+.. ++..+|+|.++...   .....+..|+.+++.+.  +|+||+++++.+.... ...
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH-SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC-CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            48899999999999999999988 88899999987531   12234566777666542  6999999999886522 124


Q ss_pred             ceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||++ ++|.+++..   ........  ...++..+|.|+|..|+   +|+|+||+||.
T Consensus        80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dikp~Nil  140 (288)
T cd07863          80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENIL  140 (288)
T ss_pred             ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            56899999998 588888752   22333332  23377788999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.71  E-value=1.6e-16  Score=120.91  Aligned_cols=126  Identities=16%  Similarity=0.237  Sum_probs=101.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEec---CCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          41 RYELGYVIGSGVCADVYEALDT---QNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .|++.+.||.|+||.||.+.+.   . .+..+|+|.++...     .....+..|+.++..+.+|+||+.+++.+..   
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~-~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHD-SGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCC-CCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec---
Confidence            3788999999999999999874   3 46789999987531     2345678899999998678999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....+++|||+++++|.+++. ...........  .+...+|+++|..++   +|+||+|+||-
T Consensus        77 -~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i---~H~dl~p~nil  137 (290)
T cd05613          77 -DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGI---IYRDIKLENIL  137 (290)
T ss_pred             -CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHeE
Confidence             788999999999999999986 33333333222  266778999999998   99999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.71  E-value=2.4e-16  Score=123.16  Aligned_cols=131  Identities=24%  Similarity=0.336  Sum_probs=103.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC--
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~--  112 (176)
                      ..++|++.+.||+|+||.||.+.+.. .+..+|+|.+...   ......+..|+.+++.+ +|+||+++++.+....+  
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECC-CCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence            45679999999999999999999887 7889999988542   22445688999999999 99999999998865210  


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....+++|||+ +++|.+++.....+......  .+...+|+|+|..|+   +|+|++|+||-
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi---~H~dlkp~Nil  150 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGI---IHRDLKPGNLA  150 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            012469999998 67898888644444444322  366778999999998   99999999973

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.71  E-value=7.5e-17  Score=122.29  Aligned_cols=124  Identities=18%  Similarity=0.273  Sum_probs=101.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.||++.+.. ++..+++|.++...   .....+..|+.+++.+ +|+|++++++.+..    ...+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~-~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~----~~~~   74 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHS----DKKL   74 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC-CCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhcc----CCce
Confidence            48899999999999999999987 78899999987532   2234577899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||++ ++|.+++.  ....+.+...  ..++..+|.|+|..++   +|+|++|+||-
T Consensus        75 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---~H~dl~~~nil  131 (284)
T cd07839          75 TLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV---LHRDLKPQNLL  131 (284)
T ss_pred             EEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEE
Confidence            99999997 57877765  2333443322  2377788999999998   99999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.70  E-value=2.1e-16  Score=117.64  Aligned_cols=119  Identities=21%  Similarity=0.306  Sum_probs=95.0

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      +.||+|+||.||++...  .+..+++|.+...  ......+.+|+.++..+ +|+|++++++.+..    ....+++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~--~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK--DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQ----RQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEec--CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEec----CCccEEEEEC
Confidence            36899999999999864  4678999987654  23345688999999998 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++..  ...+.....  ..+...+|.++|..|+   +|+|++|+||-
T Consensus        74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---~H~dl~p~nil  125 (250)
T cd05085          74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC---IHRDLAARNCL  125 (250)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccChheEE
Confidence            999999999862  222322221  2256678999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.70  E-value=6.9e-17  Score=123.74  Aligned_cols=128  Identities=18%  Similarity=0.287  Sum_probs=103.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +...|.....||+|+||.||.+.+.. .+..+++|.+.... .....+.+|+.++..+ +|+|++++++.+..    ++.
T Consensus        19 ~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~----~~~   92 (297)
T cd06659          19 PRSLLENYIKIGEGSTGIVCIAREKH-SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLV----GEE   92 (297)
T ss_pred             chhhHHhhhhcCCCCceeEEEEEEcC-CCCEEEEEEEEecccchHHHHHHHHHHHHhC-CCCchhhhhhheee----CCe
Confidence            33445666789999999999999876 77899999987543 2345678899999998 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++++|.+++...........  ..+...+|+++|..++   +|+|++|+||.
T Consensus        93 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---vH~dl~p~Nil  149 (297)
T cd06659          93 LWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGV---IHRDIKSDSIL  149 (297)
T ss_pred             EEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHeE
Confidence            9999999999999998864444443322  2266778999999998   99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG1095|consensus

Probab=99.70  E-value=9e-17  Score=137.14  Aligned_cols=130  Identities=18%  Similarity=0.217  Sum_probs=104.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ......++...||+|+||.||.|......+    ..||+|.++..  ......|.+|..+|+.+ +||||++++|.+.+ 
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~-  766 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLD-  766 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecC-
Confidence            345578889999999999999999865122    24889988765  34677899999999999 99999999999999 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCC--------CCChhhH-hhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPD--------ELDLDNL-QDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~-~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....+|++|||+||+|..||+..        .+....+ .++ ++..++.||++++.   |||||+.+|..
T Consensus       767 ---~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~f---vHRDLAaRNCL  834 (1025)
T KOG1095|consen  767 ---SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHF---VHRDLAARNCL  834 (1025)
T ss_pred             ---CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCC---cCcchhhhhee
Confidence               78899999999999999999822        1222111 122 66777999999999   99999999963

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.70  E-value=1.8e-16  Score=120.49  Aligned_cols=130  Identities=22%  Similarity=0.367  Sum_probs=108.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+..+.|...+.+|+|.+|.||.+.+.. .+..+++|.+.........+..|+.++..+ +|+|++++++.+..    ..
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~   88 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRA-TGKEVAIKKMRLRKQNKELIINEILIMKDC-KHPNIVDYYDSYLV----GD   88 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEcc-CCcEEEEEEEecCchhHHHHHHHHHHHHHC-CCCCeeEEEEEEEE----CC
Confidence            4566779999999999999999999986 678899999886544456788999999998 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..|+++||+++++|.+++...  ..+....  ...+...+|+++|..|+   +|.|++|+||.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi---~H~dl~p~ni~  148 (286)
T cd06614          89 ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV---IHRDIKSDNIL  148 (286)
T ss_pred             EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCChhhEE
Confidence            999999999999999999732  3444332  22366778999999888   99999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=2e-16  Score=127.97  Aligned_cols=121  Identities=18%  Similarity=0.241  Sum_probs=98.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ...|.+...||+|+||.||++.+.. .+..+++|....     ..+.+|+.+++.+ +|+||+++++.+..    ....+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-~~~~vavK~~~~-----~~~~~E~~iL~~L-~HpnIv~l~~~~~~----~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD-YPQRVVVKAGWY-----ASSVHEARLLRRL-SHPAVLALLDVRVV----GGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC-CCCEEEEecccc-----cCHHHHHHHHHHC-CCCCCCcEEEEEEE----CCEEE
Confidence            3469999999999999999999987 788899995332     2356899999999 99999999999988    78899


Q ss_pred             EEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||++. ++|.+++..  .........  ..++..+|.|+|..|+   ||+||||+||.
T Consensus       237 lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI---vHrDLKP~NIL  292 (461)
T PHA03211        237 LVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI---IHRDIKTENVL  292 (461)
T ss_pred             EEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---EECcCCHHHEE
Confidence            9999995 788888752  233433322  2367778999999998   99999999984

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.70  E-value=1.4e-16  Score=118.72  Aligned_cols=123  Identities=22%  Similarity=0.335  Sum_probs=101.6

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++.+.||.|+||.||.+.+.. .+    ..+++|.+.....  ....+..|+.++..+ +|+|++++++.+..    .+.
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~   75 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKG-LSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTE----EEP   75 (258)
T ss_pred             cccceeccCCCcceEEEEecC-CCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcC----CCe
Confidence            567899999999999999876 55    7899999876532  466789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCCCC---CChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDE---LDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++++|.+++....   ........  .+...+|+++|..++   +|+|++|+||.
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~---~h~dl~~~nil  135 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF---IHRDLAARNCL  135 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe---eecccccceEE
Confidence            999999999999999986221   34433222  266778999999998   99999999984

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.70  E-value=1.2e-16  Score=120.42  Aligned_cols=120  Identities=20%  Similarity=0.161  Sum_probs=93.9

Q ss_pred             EEeecCCeeEEEEEecCC-CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          47 VIGSGVCADVYEALDTQN-GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      .||+|+||.||+|....+ .+..+++|.++...  .....+.+|+.+++.+ +|+|++++++.+..    ....+++|||
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~   76 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTE----VTPYLLVMEF   76 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcC----CCCcEEEEEC
Confidence            589999999999976431 34578999887542  2345688899999999 99999999999887    6789999999


Q ss_pred             CCCCChhhhcCCC------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPD------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++...      ..+....  ...+...++.|+|..++   +|+|+||+||.
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~dlkp~nil  132 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF---IHSDLALRNCL  132 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE---eccccCcceEE
Confidence            9999999998521      1111111  22367778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0599|consensus

Probab=99.70  E-value=3.6e-18  Score=126.23  Aligned_cols=134  Identities=17%  Similarity=0.222  Sum_probs=110.4

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-----h----hhHHHHHHHHHHHHhccCCCCccee
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-----P----EFIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-----~----~~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      ++...+.+.|...+.+|.|..+.|.+|..+. ++..+++|.+...     +    ...++-..|+.+++.+.+||+|+.+
T Consensus        10 ~aa~~fy~~y~pkeilgrgvss~vrRci~k~-t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l   88 (411)
T KOG0599|consen   10 DAAKGFYAKYEPKEILGRGVSSVVRRCIHKE-TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDL   88 (411)
T ss_pred             hhHhhHHhhcChHHHhcccchhhhhhhhhcc-cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence            3445566678888999999999999999888 8889999988753     1    2355668899999999899999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcCC--CCC-ChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALKP--DEL-DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~-~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.|.+    ..++++|+|.++.|.|+|+|..  .+. ......+.+..-++.|+|...|   |||||||+||.
T Consensus        89 ~D~yes----~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~I---VHRDLKpENIL  155 (411)
T KOG0599|consen   89 QDVYES----DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNI---VHRDLKPENIL  155 (411)
T ss_pred             eeeccC----cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhh---hhcccChhhee
Confidence            999999    8999999999999999999972  122 2223345577778999999999   99999999985

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.70  E-value=1.6e-16  Score=120.61  Aligned_cols=126  Identities=22%  Similarity=0.268  Sum_probs=100.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEec-----CCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDT-----QNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+|...++||+|+||.||.+...     . .+..+++|.+... ......+.+|+.++..+ +|+||+++++.+..    
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   78 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQ-DKMLVAVKALKEASESARQDFQREAELLTVL-QHQHIVRFYGVCTE----   78 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCC-CceEEEEEecCcCCHHHHHHHHHHHHHHhcC-CCCCCceEEEEEec----
Confidence            46888999999999999998642     2 3457888887654 33556789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC----------------CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD----------------ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||+++|+|.+++...                ..+......  .+...+++|+|..++   +|+|++|+||-
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i---~H~dlkp~nil  154 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF---VHRDLATRNCL  154 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe---ecccccHhhEE
Confidence            78899999999999999998621                122222222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG1025|consensus

Probab=99.70  E-value=1.2e-17  Score=138.09  Aligned_cols=124  Identities=22%  Similarity=0.240  Sum_probs=103.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..+..++||+|+||+||+|.|-. .++    +||+|++...  .+...++..|+..|.++ +|+|++++++.+..     
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~P-ege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~-----  769 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIP-EGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCML-----  769 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEec-CCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhccc-----
Confidence            45667899999999999999865 443    7899988764  34577899999999999 99999999999987     


Q ss_pred             ceEEEEEecCCCCChhhhcC--CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK--PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+.||++|+++|.|.|+++  .+.+-.+....+  |+..+|.|||.+.+   |||||+.+||.
T Consensus       770 s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrl---VHrdLaaRNVL  830 (1177)
T KOG1025|consen  770 STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRL---VHRDLAARNVL  830 (1177)
T ss_pred             chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcch---hhhhhhhhhee
Confidence            44999999999999999998  344443333333  88889999999999   99999999995

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.70  E-value=2.8e-16  Score=122.32  Aligned_cols=131  Identities=22%  Similarity=0.275  Sum_probs=103.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~  114 (176)
                      ..++|++.+.||+|+||.||.+.+.. ++..+++|.+...  ......+..|+.+++.+ +|+|++++++.+.... ...
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~   80 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKP-TGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESF   80 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcC-CCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeeccccccc
Confidence            35679999999999999999999987 7889999998653  23455678899999999 8999999998876522 113


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||++ ++|.+.+...........  ..++..+|+++|..++   +|+|++|+||.
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~i---vH~dlkp~Nil  138 (336)
T cd07849          81 NDVYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANV---LHRDLKPSNLL  138 (336)
T ss_pred             ceEEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEE
Confidence            46899999997 588888764444443332  2367788999999998   99999999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.70  E-value=1.6e-16  Score=120.56  Aligned_cols=125  Identities=18%  Similarity=0.209  Sum_probs=97.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..|++.+.||+|+||.||++.+.. .+.    .+++|.+....  .....+..|+.++..+ .|+||+++++.+..    
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~----   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIP-EGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG----   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcC-CCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEECC----
Confidence            458889999999999999999865 443    47777775432  2345677788888888 99999999998754    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++||+++|+|.+++.  ....+......  .++..+|+|+|..++   +|+|++|+||.
T Consensus        81 -~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---iH~dlkp~nil  141 (279)
T cd05111          81 -ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM---VHRNLAARNIL  141 (279)
T ss_pred             -CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE---eccccCcceEE
Confidence             55789999999999999996  23334333222  277778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.70  E-value=1.6e-16  Score=118.78  Aligned_cols=122  Identities=20%  Similarity=0.289  Sum_probs=98.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|++.+.||+|+||.||.+..   .+..+++|.++... ....+..|+.++..+ +|+|++++++.+..     +..++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~---~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-----~~~~~   75 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY---TGQKVAVKNIKCDV-TAQAFLEETAVMTKL-HHKNLVRLLGVILH-----NGLYI   75 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc---CCCceEEEeecCcc-hHHHHHHHHHHHHhC-CCCCcCeEEEEEcC-----CCcEE
Confidence            4689999999999999999875   46789999886542 345688999999998 99999999998865     45799


Q ss_pred             EEecCCCCChhhhcCC-C--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP-D--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~-~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.+++.. .  ..+.....  ..+...++.++|..|+   +|+|++|+||-
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~H~dl~p~nil  132 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL---VHRDLAARNIL  132 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccCcceEE
Confidence            9999999999999862 2  22332221  2266778999999988   99999999983

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.70  E-value=2.2e-16  Score=117.79  Aligned_cols=120  Identities=19%  Similarity=0.285  Sum_probs=98.7

Q ss_pred             eEEeecCCeeEEEEEecCCC---CeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNG---NKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~---~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||.+.+.. .   +..+++|.+.....  ....+..|+.++..+ +|+|++++++.+..    ...++++
T Consensus         1 ~~ig~g~~g~v~~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~~lv   74 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKG-KDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTE----EEPLYLV   74 (262)
T ss_pred             CccccCCceEEEEEEEec-CCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecC----CCceEEE
Confidence            368999999999999875 4   67899999876532  356788999999999 89999999999988    7889999


Q ss_pred             EecCCCCChhhhcCC----------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKP----------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~----------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++..          ........  ...+...+|+++|..++   +|+|++|+||.
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~di~p~nil  137 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF---VHRDLAARNCL  137 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc---ccCccCcceEE
Confidence            999999999999973          22333222  22266778999999998   99999999984

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.70  E-value=1.6e-16  Score=120.91  Aligned_cols=128  Identities=18%  Similarity=0.213  Sum_probs=101.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .++|++...||+|+||.||++.+..    ..+..+++|.+...  ......+.+|+.+++.+ .|+|++++++.+..   
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~---   79 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAV---   79 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcC---
Confidence            4569999999999999999998631    03568999988754  23456688999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCC-----------------------CChhh--HhhhhhHHHHHHHHhcCCCcccccc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDE-----------------------LDLDN--LQDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                       +...+++|||+++|+|.+++....                       .+...  ....+...+|.++|..++   +|+|
T Consensus        80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i---~H~d  155 (288)
T cd05050          80 -GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF---VHRD  155 (288)
T ss_pred             -CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe---eccc
Confidence             788999999999999999985210                       11111  122366778999999988   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      ++|+||.
T Consensus       156 l~p~nil  162 (288)
T cd05050         156 LATRNCL  162 (288)
T ss_pred             ccHhheE
Confidence            9999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.70  E-value=3.1e-16  Score=117.99  Aligned_cols=127  Identities=17%  Similarity=0.294  Sum_probs=101.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .|+..+.||+|+||.||++.+.. ++..+++|.+...      ......+.+|+.+++.+ +|+||+++++.+...  ..
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~--~~   78 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVD-TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDR--AE   78 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcC-CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcC--CC
Confidence            58899999999999999999877 7889999988643      12345688899999999 999999999988652  14


Q ss_pred             ceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||+++++|.+++.. ...+....  ...+...+|+++|..++   +|+|++|+||.
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---~H~~l~p~nil  138 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI---VHRDIKGANIL  138 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEE
Confidence            678999999999999999862 23333222  23366778999999988   99999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=2e-16  Score=118.36  Aligned_cols=119  Identities=19%  Similarity=0.240  Sum_probs=95.2

Q ss_pred             eEEeecCCeeEEEEEecCCCC---eEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGN---KKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.||+|+||.||+|.+.. .+   ..+++|.+.....  ....+..|+.+++.+ .|+|++++++.+..     +..+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-----~~~~~v   73 (257)
T cd05060           1 KELGHGNFGSVVKGVYLM-KSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCKG-----EPLMLV   73 (257)
T ss_pred             CccCccCceeEEEeEeec-cCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEcC-----CceEEE
Confidence            468999999999998765 44   6899999876532  456788999999998 99999999987754     568999


Q ss_pred             EecCCCCChhhhcCC-CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKP-DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~-~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++.. ..........  .+...+|+++|..++   +|+|++|+||.
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i---~H~di~p~nil  127 (257)
T cd05060          74 MELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF---VHRDLAARNVL  127 (257)
T ss_pred             EEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe---eccCcccceEE
Confidence            999999999999973 2233333222  266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.70  E-value=1.5e-16  Score=120.00  Aligned_cols=126  Identities=20%  Similarity=0.338  Sum_probs=103.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|.+.+.||+|+||.||++.... .+..+++|.+...    ......+..|..++..+.+|+||+++++.+..    .+.
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----~~~   76 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKE-TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD----EEN   76 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcC-CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC----Cce
Confidence            58999999999999999999987 7889999998752    22345678899999998339999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC-CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||++++++|.+++.. ..........  .+...+|.++|..++   +|.|++|+||-
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~---~H~dl~~~ni~  134 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGI---IHRDLKPENIL  134 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeE
Confidence            9999999999999999973 2334333222  267778999999998   99999999974

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.70  E-value=3.6e-16  Score=119.01  Aligned_cols=126  Identities=18%  Similarity=0.295  Sum_probs=103.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ..|...+.||+|++|.||.+.+.. .+..+++|.+.... .....+.+|+.+++.+ +|+|++++++.+..    .+..+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~----~~~~~   92 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKS-TGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLV----GDELW   92 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECC-CCCEEEEEEEeccchhHHHHHHHHHHHHHHc-CCCChheEEEEEEc----CCeEE
Confidence            346666899999999999999877 77899999886543 2345678899999998 99999999999988    78899


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++++|.+++.....+....  ...+...+|+++|..|+   +|+|++|+||.
T Consensus        93 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i---~H~dl~p~Nil  147 (285)
T cd06648          93 VVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGV---IHRDIKSDSIL  147 (285)
T ss_pred             EEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCChhhEE
Confidence            9999999999999987543443332  22367778999999998   99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.70  E-value=4.3e-16  Score=116.61  Aligned_cols=125  Identities=20%  Similarity=0.251  Sum_probs=105.4

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|.+.+.||+|++|.||++.+.. .+..+++|.+....  .....+..|+..+..+ +|+|++++++.+..    .+.++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~   75 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKP-TGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYK----EGEIS   75 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcC-CCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEcc----CCeEE
Confidence            58889999999999999999987 78899999987653  3466789999999999 89999999999988    78999


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|.+++. .........  ...+...+++++|. .++   +|+|++|+||-
T Consensus        76 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~---~H~~l~~~ni~  132 (264)
T cd06623          76 IVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHI---IHRDIKPSNLL  132 (264)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCC---ccCCCCHHHEE
Confidence            9999999999999996 333333332  22266778999999 999   99999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0579|consensus

Probab=99.70  E-value=1.4e-18  Score=140.70  Aligned_cols=130  Identities=17%  Similarity=0.253  Sum_probs=108.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      -++.+.|.++-.||.|+||.||++..+. ++...|.|+|...+ .....++-|+.++..+ +||+|+++++.|-.    .
T Consensus        28 lnP~d~WeIiGELGDGAFGKVyKA~nke-t~~lAAaKvIetkseEELEDylVEIeILa~C-dHP~ivkLl~ayy~----e  101 (1187)
T KOG0579|consen   28 LNPRDHWEIIGELGDGAFGKVYKAVNKE-TKLLAAAKVIETKSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYF----E  101 (1187)
T ss_pred             CCHHHHHHHHhhhcCccchhhhhhhccc-chhhhhhhhhcccchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhc----c
Confidence            4566778999999999999999999887 77788899988754 5788899999999998 99999999999988    8


Q ss_pred             ceEEEEEecCCCCChhhhcC---CCCCChhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK---PDELDLDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|++.|||+||-...++-   ..+..-+....| +.+-+|.|||+..|   ||||||.+||.
T Consensus       102 nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~i---IHRDLKAGNiL  162 (1187)
T KOG0579|consen  102 NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNI---IHRDLKAGNIL  162 (1187)
T ss_pred             CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcch---hhhhccccceE
Confidence            99999999999998877764   223333223334 77889999999999   99999999984

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.70  E-value=2.7e-16  Score=119.90  Aligned_cols=127  Identities=20%  Similarity=0.239  Sum_probs=100.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..|.+...||+|+||.||.+.+..    .....+++|.+.... .....+.+|+.++..+ +|+|++++++.+..    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGD----G   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-CCCCcceEEEEEcc----C
Confidence            458999999999999999997532    023457888876543 3456788999999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++++|.+++....                 .+....  ...+...+++++|..++   +|+|++|+||-
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dlkp~Nil  155 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF---VHRDLATRNCL  155 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccCcceEE
Confidence            88999999999999999985211                 222222  22266778999999998   99999999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.70  E-value=3.7e-16  Score=116.89  Aligned_cols=124  Identities=22%  Similarity=0.249  Sum_probs=98.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|++.+.||+|+||.||++..   .+..+++|.+.... ....+..|+.+++.+ +|+|++++++.+...   .+..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~---~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~---~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEE---KGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE---cCCcEEEEEeCCCc-hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcC---CCceEE
Confidence            4689999999999999999976   45678999876443 345688999999998 999999999876442   567899


Q ss_pred             EEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++|+|.++++..   ..+....  ...++..+|+++|..|+   +|+|++|+||-
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil  134 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF---VHRDLAARNVL  134 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eccccchheEE
Confidence            99999999999998632   1223222  22366778999999988   99999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.70  E-value=2.6e-16  Score=119.25  Aligned_cols=124  Identities=15%  Similarity=0.247  Sum_probs=101.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +|+..+.||.|++|.||++.+.. ++..+++|.+....  .....+..|+.+++.+ +|+|++++++.+..    .+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~~   74 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRT-TGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHT----ENKLM   74 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECC-CCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEee----CCcEE
Confidence            48899999999999999999987 78899999987642  2345577899999999 99999999999998    78899


Q ss_pred             EEEecCCCCChhhhcCC----CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP----DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~----~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||++ |+|.+++..    ...+.....  ..+...+|+++|..++   +|+|++|+||.
T Consensus        75 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~h~dl~p~ni~  132 (284)
T cd07836          75 LVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV---LHRDLKPQNLL  132 (284)
T ss_pred             EEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEE
Confidence            9999998 488888752    123333322  2367778999999998   99999999974

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.70  E-value=2.5e-16  Score=119.26  Aligned_cols=128  Identities=17%  Similarity=0.205  Sum_probs=101.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .+.|.+.+.||+|+||.||++.+...    .+..+++|.++...  .....+..|+.+++.+ +|+||+++++.+..   
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~---   80 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFE---   80 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcc---
Confidence            35699999999999999999987530    23578899876532  2345688899999999 99999999998887   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC--------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD--------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....+++|||+++|+|.+++...        ..+....  ...+...+|+|+|..++   +|+|++|+||.
T Consensus        81 -~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~nil  148 (277)
T cd05036          81 -RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHF---IHRDIAARNCL  148 (277)
T ss_pred             -CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccchheEE
Confidence             67789999999999999998521        2233222  22366778999999988   99999999984

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.70  E-value=2.3e-16  Score=118.16  Aligned_cols=119  Identities=20%  Similarity=0.307  Sum_probs=94.1

Q ss_pred             EEeecCCeeEEEEEecC-CCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEe
Q psy9091          47 VIGSGVCADVYEALDTQ-NGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~-~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      +||+|+||.||+|.+.. ..+..+++|.+...   ......+..|+.+++.+ +|+|++++++.+..     ...+++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-----~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICEA-----ESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-----CCcEEEEe
Confidence            58999999999997632 04578999988653   23456788999999998 99999999988754     56799999


Q ss_pred             cCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         123 REAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       123 ~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+++|+|.+++. ....+.+....  .+...+|+++|..|+   +|+|++|+||.
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---~H~dlkp~nil  127 (257)
T cd05116          76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF---VHRDLAARNVL  127 (257)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccchhhEE
Confidence            999999999986 33334333322  267778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.69  E-value=4.1e-16  Score=119.85  Aligned_cols=129  Identities=25%  Similarity=0.335  Sum_probs=103.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .++...|...+.||+|+||.||.+.... .+..+++|.+...    ......+.+|+.++..+ +|+|++++.+.+..  
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~--   86 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVR-TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLR--   86 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcC-CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEe--
Confidence            4556779999999999999999999877 7889999988643    23345688999999998 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....+++|||++ |++.+++.  .........  ...+...+|.|+|..++   +|+|++|+||.
T Consensus        87 --~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i---~H~dl~p~nIl  147 (307)
T cd06607          87 --EHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER---IHRDIKAGNIL  147 (307)
T ss_pred             --CCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCcccEE
Confidence              788999999997 67777664  223333332  22367778999999998   99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.69  E-value=2.5e-16  Score=119.48  Aligned_cols=125  Identities=19%  Similarity=0.274  Sum_probs=102.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.||++.+.. ++..+++|.+...   ......+..|+.+++.+ .|+|++++++.+..    .+.+
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   75 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKA-TGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRR----KGRL   75 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCC-CCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEE----CCEE
Confidence            69999999999999999999987 7889999988653   22356788999999999 89999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++++.+..++. .........  ...++..+|+++|..++   +|+|++|+||.
T Consensus        76 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~~~ni~  132 (288)
T cd07833          76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI---IHRDIKPENIL  132 (288)
T ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence            99999999877766654 233333332  23377788999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0033|consensus

Probab=99.69  E-value=2.9e-19  Score=130.08  Aligned_cols=130  Identities=17%  Similarity=0.195  Sum_probs=107.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..+.+.|.+.+.||+|.|+.|+++.... +|..+++|+++..   ....+.+.+|+.+-+.+ +||||++++..+..   
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~-tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~---   81 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQE---   81 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhcc-chHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-CCCcEeehhhhhcc---
Confidence            4556779999999999999999999988 8889999988753   23567789999999998 99999999999987   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChh--hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLD--NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~--~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....|+|+|+++||+|..-|- +.-..+.  .....|++-+|.|+|.++|   ||||+||.|+.
T Consensus        82 -~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~I---vHRDvkP~nll  142 (355)
T KOG0033|consen   82 -ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGI---VHRDLKPENLL  142 (355)
T ss_pred             -cceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---eeccCChhhee
Confidence             899999999999999965443 3222221  1234478889999999999   99999999974

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.69  E-value=2.9e-16  Score=118.44  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=94.3

Q ss_pred             EEeecCCeeEEEEEecCCCCe--EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEe
Q psy9091          47 VIGSGVCADVYEALDTQNGNK--KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~~~~--~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      .||+|+||.||++.+.. .+.  .+++|.+...  ......+..|+.++..+.+|+|++++++.+..    .+.++++||
T Consensus         2 ~lg~g~~g~v~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~~~~lv~e   76 (270)
T cd05047           2 VIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RGYLYLAIE   76 (270)
T ss_pred             cCCCCCCceEEEEEEcC-CCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec----CCCceEEEE
Confidence            58999999999999866 553  4688877642  33456788999999988789999999999988    778999999


Q ss_pred             cCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         123 REAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       123 ~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+++|+|.+++....                 ...+..  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i---~H~dikp~nil  144 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNIL  144 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccccceEE
Confidence            999999999985211                 122221  12256678999999888   99999999974

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.69  E-value=2.9e-16  Score=119.67  Aligned_cols=126  Identities=20%  Similarity=0.321  Sum_probs=97.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +|++.+.||+|+||.||+|.....    ....+++|.+....  .....+..|+.+++.+ .|+||+++++.+..    .
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQ----D   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEec----C
Confidence            377889999999999999986420    12468888876542  3456788999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC-------------------------CCChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD-------------------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~-------------------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +..+++|||+++|+|.+++...                         ..+....  ...+...+|.|+|..++   +|+|
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i---vH~d  152 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL---VHRD  152 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe---ehhh
Confidence            8899999999999999987521                         0111111  12266778999999998   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      ++|+||-
T Consensus       153 ikp~nil  159 (290)
T cd05045         153 LAARNVL  159 (290)
T ss_pred             hhhheEE
Confidence            9999973

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=6e-16  Score=123.00  Aligned_cols=123  Identities=20%  Similarity=0.254  Sum_probs=97.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCC-CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQN-GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ...|.+++.||+|+||.||++....+ .+..+++|.+....    ...+|+.+++.+ +|+||+++++.+..    ...+
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l-~h~~iv~~~~~~~~----~~~~  161 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTI-SHRAIINLIHAYRW----KSTV  161 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhc-CCCCccceeeeEee----CCEE
Confidence            34699999999999999999976430 34678999876532    346799999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||++. ++|.+++. ...+.......  .+++.+|.|+|..|+   ||+||||+||.
T Consensus       162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~gi---vHrDlkp~Nil  217 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGI---IHRDVKTENIF  217 (392)
T ss_pred             EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            99999996 68888885 33344433322  377788999999998   99999999974

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.69  E-value=3.1e-16  Score=118.74  Aligned_cols=118  Identities=14%  Similarity=0.067  Sum_probs=96.2

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||+|+||.||.+.+.. ++..+++|.+....    .....+..|+.+++.+ +|+|++.+++.+..    .+..|++|||
T Consensus         1 lg~g~~g~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKA-TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFET----KDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcC-CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEec----CCeEEEEEec
Confidence            5899999999999887 78899999987532    1234567899999999 89999999999988    7889999999


Q ss_pred             CCCCChhhhcCC-C--CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP-D--ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~-~--~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++.. .  .........  .+...+|.|+|..|+   +|+||+|+||.
T Consensus        75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i---~H~di~p~Nil  127 (277)
T cd05577          75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI---VYRDLKPENVL  127 (277)
T ss_pred             CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            999999999862 2  334433322  266778999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.69  E-value=3.7e-16  Score=119.12  Aligned_cols=130  Identities=19%  Similarity=0.217  Sum_probs=99.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~~  115 (176)
                      ++|++.+.||+|+||.||++.+.. ++..+++|.+....   .....+..|+.+++.+.+|+|++++++.+.... +...
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKN-TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECC-CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            358999999999999999999987 78899999876532   123567889999999856799999999987621 1122


Q ss_pred             eEEEEEecCCCCChhhhcCCC------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|++|||+++ +|.+++...      ..+....  ...++..+|.|+|..++   +|+|++|+||-
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---~H~dl~~~nil  142 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV---MHRDLKPQNLL  142 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChHHEE
Confidence            38999999985 788887521      1233222  22366778999999998   99999999973

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.69  E-value=6.1e-16  Score=120.19  Aligned_cols=130  Identities=24%  Similarity=0.274  Sum_probs=103.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....++|++.+.||.|+||.||++.+.. ++..+++|.+...   ......+..|+.++..+ +|||++++.+.+...  
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~--   81 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQL-TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISP--   81 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECC-CCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecC--
Confidence            3456789999999999999999999887 7889999987542   22345678899999999 999999999988652  


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....++++||+ +++|.++++.........  ...+...+|+++|..++   +|+|++|+||.
T Consensus        82 -~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i---iH~dl~p~Nil  140 (328)
T cd07856          82 -LEDIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGV---VHRDLKPSNIL  140 (328)
T ss_pred             -CCcEEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEe
Confidence             45789999998 468988886444433332  22366778999999998   99999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PHA02988 hypothetical protein; Provisional

Probab=99.69  E-value=6.1e-16  Score=117.85  Aligned_cols=122  Identities=16%  Similarity=0.172  Sum_probs=94.6

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      ..+|+|+++.||+|.+   .+..+|+|.+....    .....+.+|+.++..+ +||||+++++.+.........++++|
T Consensus        26 ~~i~~g~~~~v~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~  101 (283)
T PHA02988         26 VLIKENDQNSIYKGIF---NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLIL  101 (283)
T ss_pred             eEEeeCCceEEEEEEE---CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEE
Confidence            5789999999999998   46889999987642    2246678999999999 99999999998865111135689999


Q ss_pred             ecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++.. ........  ...+...+|.++|.. ++   +|||++|+||-
T Consensus       102 Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~---~Hrdlkp~nil  155 (283)
T PHA02988        102 EYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNK---PYKNLTSVSFL  155 (283)
T ss_pred             EeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCC---CCCcCChhhEE
Confidence            99999999999972 22332221  223667789999974 77   79999999974

>KOG0690|consensus

Probab=99.69  E-value=1.5e-17  Score=125.63  Aligned_cols=126  Identities=19%  Similarity=0.258  Sum_probs=106.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|..++.||+|.||+|..|..+. ++..+|+|++++.    .+....-..|-.++... +||.++.+...|.+    ..
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKa-t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt----~d  241 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKA-TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQT----QD  241 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecc-cCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhcc----Cc
Confidence            357778999999999999999988 8999999999874    34566678899999998 99999999999988    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+.||.|+--|. ......+..++.  ++..+|.|||+.+|   ||||||-+|..
T Consensus       242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~i---vYRDlKLENLl  300 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNI---VYRDLKLENLL  300 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCe---eeeechhhhhe
Confidence            9999999999999987776 344445455555  56778999999999   99999999863

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.69  E-value=2.5e-16  Score=122.44  Aligned_cols=130  Identities=23%  Similarity=0.285  Sum_probs=103.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+.|.+.+.||+|+||.||.+.... ++..+++|.+....   .....+..|+.+++.+ +|+||+++++.+........
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTR-SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcC-CCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCc
Confidence            3679999999999999999999987 88999999887532   2345677899999999 89999999998865322256


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+. |+|.+++. ......+....  .++..+|+|+|..++   +|+|++|+||.
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~Nil  139 (334)
T cd07855          82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV---IHRDLKPSNLL  139 (334)
T ss_pred             eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            7999999996 68988886 33344433322  267778999999988   99999999984

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0662|consensus

Probab=99.69  E-value=2.1e-17  Score=115.69  Aligned_cols=124  Identities=19%  Similarity=0.283  Sum_probs=101.4

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|...++||+|+||+|+++.... +.+.||+|.++....   ......+|+++++.+ .|.||+++++....    +..+
T Consensus         3 ~ydkmekigegtygtvfkarn~~-t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhs----dkkl   76 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHS----DKKL   76 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCC-ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhcc----Ccee
Confidence            36667899999999999999888 889999999987532   356789999999999 99999999999887    8999


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      -+|+|||. -+|..+..  .+..+.+..+  +.+.+.+|.++|+.++   +|||+||+|..
T Consensus        77 tlvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnv---lhrdlkpqnll  133 (292)
T KOG0662|consen   77 TLVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNV---LHRDLKPQNLL  133 (292)
T ss_pred             EEeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhh---hhccCCcceEE
Confidence            99999997 46766654  3344443322  2377778999999999   99999999964

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.68  E-value=3.2e-16  Score=120.28  Aligned_cols=125  Identities=17%  Similarity=0.184  Sum_probs=98.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..|+..+.||+|+||.||++.+.. .+.    .+++|.+....  .....+..|+.+++.+ .|+|++++++.+..    
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~----   80 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLS----   80 (303)
T ss_pred             hhceeccccccCCCccEEEEEEec-CCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcC----
Confidence            458889999999999999998865 443    57888876542  2344688899999998 99999999998865    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++||+++|+|.+++...  .......  ...+...+|+|+|..++   +|+|+||+||-
T Consensus        81 -~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---vH~dikp~Nil  141 (303)
T cd05110          81 -PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL---VHRDLAARNVL  141 (303)
T ss_pred             -CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe---eccccccceee
Confidence             4467899999999999998632  2333222  22377778999999998   99999999984

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.68  E-value=8.3e-16  Score=114.37  Aligned_cols=125  Identities=18%  Similarity=0.291  Sum_probs=104.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|.+.+.||.|+||.||.+.+.. ++..+++|.+....   .....+..|+.+++.+ +|+|++++.+.+..    ....
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~----~~~~   74 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS-DGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEE----KGKL   74 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC-CCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEec----CCEE
Confidence            48899999999999999999987 78899999987642   3556788999999999 89999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||+++++|.+++..     ...+....  ...+...+|.++|..|+   +|+|++|+||.
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---~H~dl~~~nil  135 (258)
T cd08215          75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI---LHRDIKPQNIF  135 (258)
T ss_pred             EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE---ecccCChHHeE
Confidence            999999999999999863     22333332  22266778999999988   99999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0196|consensus

Probab=99.68  E-value=8e-17  Score=132.65  Aligned_cols=125  Identities=18%  Similarity=0.205  Sum_probs=104.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.++.+.||.|.||.|+.|..+. .+   ..||||.++..  .+....|+.|..+|..+ +||||+.+-|....    ..
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~-pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTk----s~  703 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKL-PGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTK----SK  703 (996)
T ss_pred             heEEEEEEecccccceecccccC-CCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEec----Cc
Confidence            57788999999999999998875 44   48999999875  35677899999999999 99999999999988    79


Q ss_pred             eEEEEEecCCCCChhhhcCCC--CCC-hhhHhhh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD--ELD-LDNLQDC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~--~~~-~~~~~~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+|||++|+|..||+..  ... .+..-+. ++.-+|+||-..+.   |||||+..||.
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~Y---VHRDLAARNIL  763 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNY---VHRDLAARNIL  763 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCc---hhhhhhhhhee
Confidence            999999999999999999832  222 1122222 56667999999999   99999999985

>KOG3653|consensus

Probab=99.68  E-value=1.3e-16  Score=125.04  Aligned_cols=130  Identities=21%  Similarity=0.217  Sum_probs=100.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc-CCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS-QHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~-~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ....+.+.+|+|.||.||+|..   .++.||||+++...  .+.|.+|-.+..... .|+||++|++.-.........+|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL---~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL---DNRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc---cCceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            3467789999999999999998   45899999987654  356777777766532 89999999998766222234899


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHh------cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIG------SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~------~~i~~~v~~~~~~~nv~  174 (176)
                      ||++|.+.|+|.++|+..-.+-.....  .....+|+|||.      ....+++|||+|+.||.
T Consensus       285 LVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVL  348 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVL  348 (534)
T ss_pred             EEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceE
Confidence            999999999999999865555433222  244557999994      34578899999999995

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.68  E-value=8.8e-16  Score=117.13  Aligned_cols=125  Identities=19%  Similarity=0.273  Sum_probs=100.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|.+|.||++.+.. .+..+++|.+....   .....+.+|+.+++.+ +|+|++++++.+..    .+.
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   75 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHS----EKR   75 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecC-CCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEec----CCe
Confidence            469999999999999999999987 78899999886532   2345678899999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCC-CC--CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-DE--LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~~--~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++||||++ ++|.+++.. ..  .+....  ...+...+|+|+|..++   +|+|++|+||.
T Consensus        76 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---~H~dl~p~nil  134 (294)
T PLN00009         76 LYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV---LHRDLKPQNLL  134 (294)
T ss_pred             EEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCcceEE
Confidence            999999996 578777752 21  222221  22367778999999988   99999999974

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.68  E-value=4.4e-16  Score=121.60  Aligned_cols=131  Identities=20%  Similarity=0.269  Sum_probs=103.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC---
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT---  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~---  113 (176)
                      ...+|.+.+.||.|+||.||+|.+.. ++..+++|.+.... .....+.+|+.+++.+ +|+|++++++.+......   
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~-~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSD-CDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECC-CCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhccccccccc
Confidence            45789999999999999999999987 88899999887643 3456688899999999 999999999876552100   


Q ss_pred             -------cceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 -------HSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                             ...++++|||++ ++|.+++..........  ...+...+|.|+|..|+   +|+|++|+||.
T Consensus        81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi---vH~dikp~Nil  146 (342)
T cd07854          81 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANV---LHRDLKPANVF  146 (342)
T ss_pred             ccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence                   135899999997 68888876433333332  23377788999999998   99999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.68  E-value=5.5e-16  Score=117.42  Aligned_cols=124  Identities=15%  Similarity=0.220  Sum_probs=95.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHH-HHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRM-LRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~-~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.||++.+.. ++..+|+|.++...  .....+..|+.. ++.+ +|+|++++++.+..    .+.+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~iv~~~~~~~~----~~~~   75 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVP-TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV-DCPYTVTFYGALFR----EGDV   75 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcC-CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc-CCCCeeeeeEEEec----CCcE
Confidence            58999999999999999999987 78999999987642  223345556665 4445 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      +++|||++ |+|.+++..     ...+....  ...++..+|+|+|.. ++   +|+|++|+||.
T Consensus        76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i---~h~dlkp~nil  136 (283)
T cd06617          76 WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV---IHRDVKPSNVL  136 (283)
T ss_pred             EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe---ecCCCCHHHEE
Confidence            99999997 678777641     12333222  233677789999986 77   99999999973

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.68  E-value=2.2e-16  Score=118.38  Aligned_cols=125  Identities=18%  Similarity=0.236  Sum_probs=103.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|+..+.||+|+||.||++.+.. .+..+++|.+...  ......+.+|+.+++.+ .|+|++++++.+..    .+.++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~~   75 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRP-TGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYN----NGDIS   75 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcC-CCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeec----CCEEE
Confidence            47788899999999999999987 7889999988764  33456788999999998 89999999999988    78999


Q ss_pred             EEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++++|.+++..  ...+....  ...+...+++++|. .++   +|+|++|+||.
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i---~H~dl~~~ni~  133 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI---IHRDVKPSNIL  133 (265)
T ss_pred             EEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe---ecCCCCHHHEE
Confidence            99999999999999862  33333222  22266778999999 888   99999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0608|consensus

Probab=99.68  E-value=7e-17  Score=130.79  Aligned_cols=127  Identities=13%  Similarity=0.138  Sum_probs=104.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..-|..++.||-|+||.|.++.... +...+|.|.+++..    .....+..|-.+|... ++++||+++-.|.+    .
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvD-T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQD----k  701 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVD-TRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQD----K  701 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecc-hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEecc----C
Confidence            3468999999999999999998766 67789999887642    2345678899999998 99999999999999    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||+|++||++..+|- .+-.++...++.  ++.-+++++|..|.   ||||||||||.
T Consensus       702 dnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGF---IHRDiKPDNIL  761 (1034)
T KOG0608|consen  702 DNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGF---IHRDIKPDNIL  761 (1034)
T ss_pred             CceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccc---eecccCccceE
Confidence            88999999999999988875 443333333343  66778999999999   99999999985

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.68  E-value=4.7e-16  Score=116.60  Aligned_cols=118  Identities=17%  Similarity=0.208  Sum_probs=97.8

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||.|++|.||.+.+.. .+..+++|.+....    .....+..|+.+++.+ +|+|++++++.+..    +..++++|||
T Consensus         1 lg~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKS-KNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKD----KKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECC-CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEc----CCccEEEEec
Confidence            6899999999999977 78899999987532    3446788999999999 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCC-CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP-DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~-~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++.. ..........  .+.+.+|+++|..++   +|+|++|+||-
T Consensus        75 ~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~---~h~dl~~~nil  125 (262)
T cd05572          75 CLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGI---IYRDLKPENLL  125 (262)
T ss_pred             CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCHHHEE
Confidence            999999999963 2333333222  267778999999888   99999999983

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.68  E-value=2.6e-16  Score=120.37  Aligned_cols=125  Identities=18%  Similarity=0.253  Sum_probs=102.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      .|.....||+|+||.||.+.... .+..+++|.+.... .....+.+|+.+++.+ +|+|++++++.+..    .+..++
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~~~l   94 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLV----GDELWV   94 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcC-CCeEEEEEEecccchhHHHHHHHHHHHHHhc-CCcchhheeeEEEe----CCEEEE
Confidence            34555789999999999999887 78899999876533 2445688899999998 99999999999998    789999


Q ss_pred             EEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+++++|.+++..........  ...+...+++++|..|+   +|+|++|+||-
T Consensus        95 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~gi---vH~dl~p~Nil  148 (292)
T cd06657          95 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGV---IHRDIKSDSIL  148 (292)
T ss_pred             EEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            999999999999886443343332  22366778999999998   99999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PRK10345 hypothetical protein; Provisional

Probab=99.68  E-value=4e-16  Score=113.85  Aligned_cols=124  Identities=18%  Similarity=0.184  Sum_probs=91.0

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhcc----CCCCcceeceeEEeccCCcceEE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLS----QHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~----~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      -.+.||+|+||.||.  +.. ... .++|.+.... .....+.+|+.+++.+.    .||||+++++.+.+..+.+..+.
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~-~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPE-DAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             CcceecCCCceEEEE--CCC-CcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            357899999999996  433 333 4688887642 23456899999999883    47999999999988321112345


Q ss_pred             EEEec--CCCCChhhhcCCCCCChhhHhhhhhHHHH-HHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQR--EAEMPPPRALKPDELDLDNLQDCGDRYEL-GYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~l-~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||  +++|+|.++++....+.......+.+.++ +|+|..+|   |||||||+||.
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~I---vhrDlKp~NIL  137 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRI---VTMELKPQNIL  137 (210)
T ss_pred             EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEE
Confidence            89999  55899999997544444333344666666 99999999   99999999984

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.68  E-value=3.7e-16  Score=118.46  Aligned_cols=124  Identities=17%  Similarity=0.249  Sum_probs=100.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|+..+.||.|++|.||++.+.. ++..+++|.+....   .....+..|+.+++.+ +|+|++++++.+..    ....
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~   74 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHT----ENKL   74 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECC-CCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhccc----CCcE
Confidence            38889999999999999999987 78899999886532   2235688899999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+. ++|.+++..   ...+.....  ..+...+|+|+|..++   +|+|++|+||.
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i---~H~~l~p~nil  132 (284)
T cd07860          75 YLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLL  132 (284)
T ss_pred             EEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            99999996 688888752   233333322  2267778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.68  E-value=8.3e-16  Score=114.91  Aligned_cols=127  Identities=17%  Similarity=0.218  Sum_probs=100.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|.+.+.||.|+||.||++.+.. .+..+++|.+...   ......+..|+.+++.+ +|+|++++++.+....  ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~--~~~~   76 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS-DGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRS--NQTL   76 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC-CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCC--CCEE
Confidence            48889999999999999999887 7889999988643   33456688899999999 9999999998876421  5678


Q ss_pred             EEEEecCCCCChhhhcCC-----CCCChhhHh--hhhhHHHHHHHH-----hcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-----DELDLDNLQ--DCGDRYELGYVI-----GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~--~~~~~~~l~~lh-----~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++++|.+++..     ...+.....  ..+...+|.++|     ..++   +|+|++|+||-
T Consensus        77 ~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i---~h~dl~p~nil  142 (265)
T cd08217          77 YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTV---LHRDLKPANIF  142 (265)
T ss_pred             EEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcc---eecCCCHHHEE
Confidence            999999999999999852     223332222  226677899999     6666   99999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.68  E-value=1.6e-16  Score=138.78  Aligned_cols=125  Identities=14%  Similarity=0.102  Sum_probs=97.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      .+.....||+|+||.||+|.+.. .+..+|+|.+.....   ....|+..++.+ +||||+++++.+..    ....|+|
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~l~~l-~HpnIv~~~~~~~~----~~~~~lv  761 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIK-NGMQFVVKEINDVNS---IPSSEIADMGKL-QHPNIVKLIGLCRS----EKGAYLI  761 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECC-CCcEEEEEEccCCcc---ccHHHHHHHhhC-CCCCcceEEEEEEc----CCCCEEE
Confidence            45666789999999999999877 788999998865322   113457788898 99999999999988    7889999


Q ss_pred             EecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.++++.-.+........+...+|+|+|...-.+++|+|+||+||-
T Consensus       762 ~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil  815 (968)
T PLN00113        762 HEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKII  815 (968)
T ss_pred             EeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence            999999999999963222222223337778899999554445599999999984

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.68  E-value=1.3e-15  Score=113.14  Aligned_cols=125  Identities=22%  Similarity=0.336  Sum_probs=103.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc--c
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH--S  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~--~  115 (176)
                      +|+..+.||+|++|.||.+.+.. .+..+++|.+....   .....+.+|+.+++.+ .|+|++++++.+..    .  .
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   74 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD-TGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERD----EEKN   74 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC-CCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEec----CCCC
Confidence            37888999999999999999987 78899999987653   3567789999999999 89999999999987    5  7


Q ss_pred             eEEEEEecCCCCChhhhcCCC-CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD-ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++||+++++|.+++... ..+....  ...+...+|+++|..++   +|+|++|+||-
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---~h~dl~p~ni~  133 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI---VHRDIKGANIL  133 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            899999999999999998632 3333222  22266778999999888   99999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.68  E-value=4.7e-16  Score=117.30  Aligned_cols=120  Identities=18%  Similarity=0.130  Sum_probs=92.3

Q ss_pred             EEeecCCeeEEEEEecCC-CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          47 VIGSGVCADVYEALDTQN-GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      .||+|+||.||++..... ....+++|.+...  ......+.+|+.+++.+ +|||++++++.+..    ....+++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~----~~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVE----AIPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-CCcchhheEEEecC----CCccEEEEec
Confidence            589999999999975430 1235667776643  23456789999999998 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCCC-----CCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPD-----ELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~-----~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|+|.+++...     ..+...  ....++..+|+|+|..++   +|+|+||+||.
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~dikp~nil  131 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF---LHSDLALRNCF  131 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe---eccCCccceEE
Confidence            9999999998621     111111  122367778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0604|consensus

Probab=99.67  E-value=1.4e-17  Score=124.22  Aligned_cols=129  Identities=16%  Similarity=0.209  Sum_probs=105.0

Q ss_pred             CCCCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          38 CGDRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ..+.|++. ++||-|-.|.|..|..+. +++.+|+|++...+    ...+|+.++-....|+|||++++.|....+....
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~-T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKR-TQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEecc-chhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            44567766 789999999999999998 99999999887654    3567787777767999999999999887666777


Q ss_pred             EEEEEecCCCCChhhhcC-CCC--C--ChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDE--L--DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~--~--~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|||+++||+|+..|+ ...  .  ........++..++.|+|+.+|   .|||+||+|+.
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nI---AHRDlKpENLL  193 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNI---AHRDLKPENLL  193 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcch---hhccCChhhee
Confidence            999999999999999997 222  1  2222234477788999999999   99999999974

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.67  E-value=3e-16  Score=119.05  Aligned_cols=126  Identities=20%  Similarity=0.185  Sum_probs=98.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .|.+.+.||+|+||.||+|.+...    .+..+|+|.+....  .....+..|+.++..+ +|+||+++++.+..    .
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~----~   80 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTK----E   80 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC----C
Confidence            477889999999999999986430    23679999987542  2345688899999998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||+++++|.+++...                 ..+....  ...+...+|+|+|..|+   +|+|+||+||-
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi---~H~dlkp~Nil  156 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV---VHKDLATRNVL  156 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc---cccccchhheE
Confidence            8899999999999999997411                 1122111  12266778999999998   99999999983

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.67  E-value=9.8e-16  Score=120.04  Aligned_cols=130  Identities=19%  Similarity=0.252  Sum_probs=101.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      ...+|+..+.||+|+||.||.+.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+|++++++.+....  .
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTV-TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECC-CCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence            34679999999999999999999987 7889999988642   23345677899999998 9999999999886421  1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....|+||||++ ++|.+.+... .+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        92 ~~~~~~lv~e~~~-~~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi---~H~dlkp~Nil  150 (353)
T cd07850          92 EFQDVYLVMELMD-ANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  150 (353)
T ss_pred             ccCcEEEEEeccC-CCHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEE
Confidence            1345899999997 5888877533 333222  22367778999999988   99999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG4721|consensus

Probab=99.67  E-value=4.1e-17  Score=130.75  Aligned_cols=123  Identities=20%  Similarity=0.179  Sum_probs=100.2

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      |..+++...-++.||+|+-|-||.|...   ++.||||.++..+      ..++.-++.| +|+||+.|.|.|.+    .
T Consensus       119 WeiPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV~elk------ETdIKHLRkL-kH~NII~FkGVCtq----s  184 (904)
T KOG4721|consen  119 WEIPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKVRELK------ETDIKHLRKL-KHPNIITFKGVCTQ----S  184 (904)
T ss_pred             ccCCHHHhhhhhhhccCcccceeeeecc---CceehhHHHhhhh------hhhHHHHHhc-cCcceeeEeeeecC----C
Confidence            5666677777899999999999999984   5789999665332      4567778999 99999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhh-Hhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDN-LQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|||||||+.|.|...|+....-.+. +-.|  ++..+|.|||.+.|   ||||||+-||.
T Consensus       185 PcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKI---IHRDLKSPNiL  244 (904)
T KOG4721|consen  185 PCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKI---IHRDLKSPNIL  244 (904)
T ss_pred             ceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhH---hhhccCCCceE
Confidence            8899999999999999999844333333 2233  66778999998888   99999999984

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.67  E-value=1.7e-15  Score=118.38  Aligned_cols=132  Identities=19%  Similarity=0.292  Sum_probs=102.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc--
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--  111 (176)
                      ...++|.+.+.||+|+||.||.+.+.. ++..+|+|.+....   .....+.+|+.++..+ +|+||+++.+.+....  
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~   91 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL   91 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcC-CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeecccc
Confidence            345679999999999999999999877 78899999886532   2345678899999999 9999999999886521  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ......+++++++ +++|.+++...........  ..+...+|+|+|..|+   +|+|++|+||.
T Consensus        92 ~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIl  152 (345)
T cd07877          92 EEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA  152 (345)
T ss_pred             cccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChHHEE
Confidence            1124478888876 6899888764444443322  2377788999999998   99999999974

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.67  E-value=8.3e-16  Score=116.28  Aligned_cols=126  Identities=20%  Similarity=0.197  Sum_probs=97.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      |++.+.||+|+||.||++.+.. .+..+++|.+....  ........|+.++..+.+|+|++++++.+.+.  ..+.+++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~-~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRK-TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR--KTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcC-CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC--CCCcEEE
Confidence            6788999999999999999987 78899999886531  12233457888888875699999999999871  1278999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||++ |++.+++..  ...+.....  ..+...+|+++|..++   +|+|++|+||-
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---~H~dl~p~ni~  132 (282)
T cd07831          78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI---FHRDIKPENIL  132 (282)
T ss_pred             EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecccCHHHEE
Confidence            999997 588888763  233333322  2267788999999998   99999999974

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.67  E-value=9.2e-16  Score=116.69  Aligned_cols=127  Identities=14%  Similarity=0.226  Sum_probs=100.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecC--CCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQ--NGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .|++.+.||+|+||.||.+.+..  ..+..+++|.+....     .....+..|+.++..+.+|+|++.+++.+..    
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~----   76 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT----   76 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence            37889999999999999988642  045789999887531     2345678899999998679999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||+++|+|.+++. ............  +...+|+++|..++   +|+|++|+||.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~---~H~dl~p~nil  137 (288)
T cd05583          77 DTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGI---IYRDIKLENIL  137 (288)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeE
Confidence            788999999999999999986 333333332222  66778999999998   99999999973

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.67  E-value=1e-15  Score=117.62  Aligned_cols=129  Identities=20%  Similarity=0.208  Sum_probs=100.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....   .....+.+|+.++..+ +|+|++++++.+...  ..
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~   80 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTT-SGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGK--HL   80 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECC-CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecC--CC
Confidence            44679999999999999999999987 88999999987532   1223456799999999 999999999998652  13


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||||++ ++|.+++..  .....+..  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        81 ~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil  140 (309)
T cd07845          81 DSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI---IHRDLKVSNLL  140 (309)
T ss_pred             CeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            56899999997 578777752  22333332  22367778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.67  E-value=3.3e-16  Score=119.44  Aligned_cols=127  Identities=20%  Similarity=0.190  Sum_probs=100.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.|+..+.||.|.||.||+|.+.. .+..+++|.++...   .....+.+|+.++..+ +|+|++++++.+....  ...
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~--~~~   80 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKK-TGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSN--LDK   80 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECC-CCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecC--CCc
Confidence            468999999999999999999987 78899999987542   2233567899999999 8999999999987721  278


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||++ ++|.+++..  ...+.+..  ...++..+|+|+|..++   +|+||+|+||-
T Consensus        81 ~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---~H~dl~p~nil  138 (293)
T cd07843          81 IYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI---LHRDLKTSNLL  138 (293)
T ss_pred             EEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCCHHHEE
Confidence            999999998 588888752  22343332  22377788999999998   99999999973

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=9e-16  Score=114.96  Aligned_cols=120  Identities=15%  Similarity=0.171  Sum_probs=93.1

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||++.+.. .+..+|+|.++...    .....+..|..++....+|+|++++++.+..    .+.+|++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRS-TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS----KDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecC-CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc----CCeEEEEE
Confidence            578999999999999977 78899999987542    1222344555544443389999999999988    78999999


Q ss_pred             ecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         122 QREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       122 e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                      ||+++++|.++++ ....+....  ...+...+|.|+|..++   +|+|++|+||
T Consensus        77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---~H~dl~p~ni  128 (260)
T cd05611          77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGI---IHRDIKPENL  128 (260)
T ss_pred             eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHe
Confidence            9999999999986 233333222  22377778999999988   9999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.67  E-value=1.7e-15  Score=112.13  Aligned_cols=124  Identities=27%  Similarity=0.446  Sum_probs=103.8

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      |...+.||+|++|.||++.+.. .+..+++|.+..... ....+.+|+.+++.+ .|+|++.+.+.+..    ....+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~l~   75 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKR-TGKEVAIKVIKLESKEKKEKIINEIQILKKC-KHPNIVKYYGSYLK----KDELWIV   75 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECC-CCcEEEEEEecccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEEec----CCeEEEE
Confidence            7888999999999999999987 678899999877543 566789999999999 89999999999988    7889999


Q ss_pred             EecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||+++++|.+++...  ..+.....  ..+...+|+++|..++   +|+|++|+||-
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i---~h~dl~p~ni~  130 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI---IHRDIKAANIL  130 (253)
T ss_pred             EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE---ecCCCCHHHEE
Confidence            9999999999998632  33333322  2266678999999888   99999999973

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.67  E-value=9.8e-16  Score=116.36  Aligned_cols=120  Identities=17%  Similarity=0.122  Sum_probs=90.3

Q ss_pred             EEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhc--cCCCCcceeceeEEeccCCcceEEEE
Q psy9091          47 VIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDL--SQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l--~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      .||+|+||.||++.+.. ++..+|+|.+....    ........+..++..+  .+|++++.+++.+..    .+..++|
T Consensus         1 ~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT----PDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEECC-CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec----CCeEEEE
Confidence            37999999999999987 78899999886532    1122233444333332  278999999999988    7889999


Q ss_pred             EecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++. ..........  ..+...+|+|+|..++   +|+|+||+||-
T Consensus        76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---vH~dikp~Nil  129 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFV---VYRDLKPANIL  129 (279)
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---CCCCCCHHHEE
Confidence            99999999999886 3334443322  2366778999999998   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=2.8e-16  Score=128.62  Aligned_cols=128  Identities=10%  Similarity=0.103  Sum_probs=91.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEE------------------EeecChhhHHHHHHHHHHHHhccCCCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK------------------VQKINPEFIDDIKEEYRMLRDLSQHSN   99 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik------------------~i~~~~~~~~~~~~e~~~~~~l~~h~n   99 (176)
                      ....|.+++.||+|+||.||+|..+...+...+.|                  .+.........+.+|+.++..+ +|+|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCCC
Confidence            34579999999999999999987643011112222                  1111122345678999999999 9999


Q ss_pred             cceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCC------hhh--HhhhhhHHHHHHHHhcCCCccccccCCCC
Q psy9091         100 IPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELD------LDN--LQDCGDRYELGYVIGSGVCADVYEALDTQ  171 (176)
Q Consensus       100 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~  171 (176)
                      |+++++++..    ....|++++++. ++|.+++......      ...  ....+++.+|+|+|.+|+   |||||||+
T Consensus       225 Iv~l~~~~~~----~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI---iHrDLKP~  296 (501)
T PHA03210        225 ILKIEEILRS----EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL---IHRDIKLE  296 (501)
T ss_pred             cCcEeEEEEE----CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHH
Confidence            9999999988    788999999986 5777776421111      111  123377788999999998   99999999


Q ss_pred             Ccc
Q psy9091         172 NVT  174 (176)
Q Consensus       172 nv~  174 (176)
                      ||.
T Consensus       297 NIL  299 (501)
T PHA03210        297 NIF  299 (501)
T ss_pred             HEE
Confidence            984

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.67  E-value=1.6e-15  Score=117.18  Aligned_cols=129  Identities=23%  Similarity=0.343  Sum_probs=102.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .++...|...+.||+|+||.||++.+.. .+..+++|.+...    .+....+..|+.+++.+ +|+|++++++.+..  
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~--   96 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVR-TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLR--   96 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcC-CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee--
Confidence            3444558889999999999999999877 7889999998643    23445688899999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....+++|||++ |++.+++.  ....+....  ...+...+|.++|..++   +|+|++|+||-
T Consensus        97 --~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i---~H~dL~p~Nil  157 (317)
T cd06635          97 --EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM---IHRDIKAGNIL  157 (317)
T ss_pred             --CCeEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcccEE
Confidence              788999999997 57777764  223333222  22366778999999998   99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.66  E-value=1.1e-15  Score=113.82  Aligned_cols=125  Identities=16%  Similarity=0.214  Sum_probs=102.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|++.+.||+|+||.+|++.+.. .+..+++|.+...   ......+..|+.+++.+ +|+|++++++.+..    ....
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~   74 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLS-DNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLD----GNKL   74 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECC-CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhcc----CCEE
Confidence            48899999999999999999887 7889999988753   23455678899999999 89999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++||+++++|.+++..     ...+....  ...+...+|+++|..|+   +|+|++|+||-
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i---~h~~l~~~ni~  135 (256)
T cd08530          75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI---LHRDLKSANIL  135 (256)
T ss_pred             EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCcceEE
Confidence            999999999999998852     22333222  12266778999999998   99999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.66  E-value=5.4e-16  Score=115.94  Aligned_cols=118  Identities=19%  Similarity=0.259  Sum_probs=97.7

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||.|+||.||.+.+.. ++..+++|.+....    .....+..|+.++..+ +|+|++++++.+..    ....|++|||
T Consensus         1 lg~g~~~~vy~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~~~~lv~e~   74 (265)
T cd05579           1 ISKGAYGRVFLAKKKS-TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQG----KKNLYLVMEY   74 (265)
T ss_pred             CCCCCceEEEEEEECC-CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheec----CcEEEEEEec
Confidence            5889999999999987 78899999987542    3456788899999999 89999999999988    7889999999


Q ss_pred             CCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++.. ...+....  ...+++.+|+++|..++   +|+||+|+||.
T Consensus        75 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i---~H~di~~~nil  125 (265)
T cd05579          75 LPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGI---IHRDLKPDNIL  125 (265)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCe---ecCCCCHHHeE
Confidence            999999999862 33333222  23377778999999998   99999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.66  E-value=1.1e-15  Score=118.96  Aligned_cols=130  Identities=21%  Similarity=0.229  Sum_probs=101.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~  114 (176)
                      .++|.+.+.||+|+||.||.+.+.. ++..+++|.+...   ......+..|+.++..+ +|+|++++++.+.... ...
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSE-TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecC-CCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheeccccccc
Confidence            4579999999999999999999987 8899999988653   22345677899999998 9999999999876521 112


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||+. ++|.+++. ..........  ..+...+|.|+|..++   +|+|++|+||.
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---~H~dlkp~Nil  140 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANV---LHRDLKPSNLL  140 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            45899999996 78888886 2333333322  2377788999999998   99999999984

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.66  E-value=2.2e-15  Score=114.13  Aligned_cols=129  Identities=16%  Similarity=0.182  Sum_probs=100.7

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCC---CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQN---GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~---~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .++|.+.+.||+|+||.||.|.+...   .+..+++|.+...  ......+.+|+.+++.+ .|+|++++++.+...   
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~---   80 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIED---   80 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecC---
Confidence            46799999999999999999987530   1467889987653  33456788999999999 999999999987652   


Q ss_pred             cceEEEEEecCCCCChhhhcCC---------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP---------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~---------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....++++||+++|+|.+++..         ........  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i---~H~di~p~nil  149 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV---IHKDIAARNCV  149 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccCHhhEE
Confidence            4678999999999999999852         11222222  22266778999999988   99999999973

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.66  E-value=6.5e-16  Score=119.09  Aligned_cols=122  Identities=16%  Similarity=0.255  Sum_probs=92.3

Q ss_pred             eeEEeecCCeeEEEEEecCC-CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          45 GYVIGSGVCADVYEALDTQN-GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ..+||+|+||.||+|.+... .+..+|+|.+.... ....+.+|+.+++.+ +|+||+++++.+....  ...+|++|||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~--~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLREL-KHPNVISLQKVFLSHA--DRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhc-CCCCCcceeeeEecCC--CcEEEEEEec
Confidence            46899999999999986420 45689999886542 234567899999999 9999999999886521  5678999999


Q ss_pred             CCCCChhhhcCCC----------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPD----------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~----------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++ ++|.+++...          .......  ...+++.+|+|+|..|+   +|+||||+||.
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i---vHrDlkp~Nil  140 (317)
T cd07868          82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV---LHRDLKPANIL  140 (317)
T ss_pred             cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE---EcCCCCHHHEE
Confidence            86 5787776411          1222222  23377888999999998   99999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.66  E-value=1.4e-15  Score=113.24  Aligned_cols=119  Identities=21%  Similarity=0.353  Sum_probs=96.1

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      +.||+|+||.||.+.+..  +..+++|.+...  ......+..|+.+++.+ .|+|++.+++.+..    ....+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~--~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG--NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQ----KQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeC--CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEec----CCCeEEEEEc
Confidence            368999999999999753  678999987753  23456789999999999 99999999999988    7889999999


Q ss_pred             CCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++..  ..........  .+...++.++|..++   +|+|++|+||.
T Consensus        74 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i---~h~di~p~nil  125 (251)
T cd05041          74 VPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC---IHRDLAARNCL  125 (251)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ehhhcCcceEE
Confidence            999999999852  2233322222  255668999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0668|consensus

Probab=99.65  E-value=2.9e-17  Score=118.78  Aligned_cols=127  Identities=21%  Similarity=0.286  Sum_probs=105.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .+.|++..++|+|.++.|+.|.... +.+.+++|.+++-.+  +.+.+|+.++..+++++||+++.+...++.  .....
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~-~~eK~ViKiLKPVkk--kKIkREikIL~nL~gg~NIi~L~DiV~Dp~--Sktpa  111 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINIT-NNEKCVIKILKPVKK--KKIKREIKILQNLRGGPNIIKLLDIVKDPE--SKTPS  111 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccC-CCceEEEeeechHHH--HHHHHHHHHHHhccCCCCeeehhhhhcCcc--ccCch
Confidence            4569999999999999999999776 678899999887543  568999999999988999999999998864  34578


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHh-hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQ-DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+||+.+-+...+. +.+.+.+.+. ..+.+.+|.|+|+.||   .|||+||.||.
T Consensus       112 LiFE~v~n~Dfk~ly-~tl~d~dIryY~~elLkALdyCHS~GI---mHRDVKPhNvm  164 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLY-PTLTDYDIRYYIYELLKALDYCHSMGI---MHRDVKPHNVM  164 (338)
T ss_pred             hHhhhhccccHHHHh-hhhchhhHHHHHHHHHHHHhHHHhcCc---ccccCCcceee
Confidence            999999988776666 5555554443 3488899999999999   99999999985

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.65  E-value=6.4e-16  Score=116.24  Aligned_cols=119  Identities=18%  Similarity=0.239  Sum_probs=93.7

Q ss_pred             EEeecCCeeEEEEEecCCCC------eEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          47 VIGSGVCADVYEALDTQNGN------KKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~~~------~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .||+|+||.||.+.... ..      ..+++|.+....  .....+.+|+.+++.+ +|+||+++++.+..    ....+
T Consensus         2 ~lg~g~~g~vy~~~~~~-~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~   75 (269)
T cd05044           2 FLGSGAFGEVYEGTATD-ILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLL----NEPQY   75 (269)
T ss_pred             ccccccceeEEeeeecc-cccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecC----CCCeE
Confidence            58999999999998753 22      578899876532  3456788999999999 99999999999987    77899


Q ss_pred             EEEecCCCCChhhhcCC--------CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP--------DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~--------~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|.+++..        .........  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nil  138 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHF---IHRDLAARNCL  138 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChheEE
Confidence            99999999999999852        112222222  2256667999999998   99999999974

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.65  E-value=1.1e-15  Score=116.82  Aligned_cols=130  Identities=19%  Similarity=0.276  Sum_probs=100.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc----
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH----  111 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~----  111 (176)
                      .+.|++.+.||+|+||.||+|.+.. .+..+++|.++...   .....+..|+.+++.+ +|||++++++.+....    
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKD-TGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECC-CCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhh
Confidence            3568999999999999999999987 78899999987532   2334677899999999 9999999999887621    


Q ss_pred             --CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 --QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 --~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .....+++++||+++ ++.+++..  ...+.+...  ..+...+|+|+|..++   +|+|++|+||-
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---~H~dl~p~nil  148 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF---LHRDIKCSNIL  148 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence              012379999999985 67776652  223333322  2367778999999998   99999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.65  E-value=2.1e-15  Score=112.99  Aligned_cols=122  Identities=16%  Similarity=0.207  Sum_probs=92.8

Q ss_pred             eEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|+||.||+|.+...  ....+++|.+...  ......+..|+.+++.+ +|+|++++++.+...   ....+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~---~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPS---EGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecC---CCCcEEEE
Confidence            3689999999999986430  2357899987543  33456788899999998 999999999976542   45688999


Q ss_pred             ecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++...  .......  ...++..+|.|+|..++   +|+|++|+||.
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlk~~nil  130 (262)
T cd05058          77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF---VHRDLAARNCM  130 (262)
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccCcceEE
Confidence            999999999998622  2222221  12267778999999988   99999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.65  E-value=2.6e-15  Score=115.86  Aligned_cols=128  Identities=23%  Similarity=0.351  Sum_probs=102.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +..+.|...+.||+|+||.||+|.+.. .+..+++|.+...    ......+..|+.+++.+ +|+|++++++.+..   
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~---   92 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSH-TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLK---   92 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECC-CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEe---
Confidence            444557888899999999999999877 7889999998743    23445678899999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....|++|||+. |++.+++.  ....+.....  ..+...++.|+|..|+   +|+|++|+||-
T Consensus        93 -~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi---~H~dl~p~nil  153 (313)
T cd06633          93 -EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM---IHRDIKAGNIL  153 (313)
T ss_pred             -CCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCChhhEE
Confidence             788999999996 67777775  2233332222  2266778999999998   99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.65  E-value=7.6e-16  Score=119.71  Aligned_cols=128  Identities=22%  Similarity=0.191  Sum_probs=101.0

Q ss_pred             CCCCCeEE-eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhh---------------HHHHHHHHHHHHhccCCCCc
Q psy9091          37 DCGDRYEL-GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF---------------IDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        37 ~~~~~~~~-~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~---------------~~~~~~e~~~~~~l~~h~ni  100 (176)
                      ...++|.. .+.||.|+||.||++.+.. .+..+|+|.+......               ...+..|+.++..+ +|+|+
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i   82 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTL-TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENI   82 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECC-CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcce
Confidence            34566764 5779999999999999887 7889999988653211               12467899999999 99999


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++.+..    ....+++|||++ |+|.+++. ......+..  ...+...+|+++|..|+   +|+||+|+||.
T Consensus        83 v~~~~~~~~----~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i---~H~dl~~~nil  151 (335)
T PTZ00024         83 MGLVDVYVE----GDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYF---MHRDLSPANIF  151 (335)
T ss_pred             eeeeEEEec----CCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccccHHHeE
Confidence            999999988    789999999997 68988886 233333332  22367778999999988   99999999984

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.65  E-value=2.2e-15  Score=114.00  Aligned_cols=123  Identities=20%  Similarity=0.276  Sum_probs=100.7

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc--ce
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH--SE  116 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~--~~  116 (176)
                      |.+.+.||+|+||.||++.+.. .+..+++|.+...   ......+..|+.+++.+ .|+|++++++.+..    .  ..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK-TGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTS----KGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC-CCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEec----CCCCc
Confidence            6788999999999999999987 7889999998865   23445678899999999 89999999999987    5  78


Q ss_pred             EEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||++ ++|.+++...  ..+.+...  ..++..+|+++|..++   +|+|++|+||.
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~---~h~dl~p~nil  132 (287)
T cd07840          75 IYMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI---LHRDIKGSNIL  132 (287)
T ss_pred             EEEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCcHHHeE
Confidence            999999998 5888888632  34443322  2266778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG2345|consensus

Probab=99.65  E-value=3.9e-16  Score=113.79  Aligned_cols=136  Identities=12%  Similarity=0.080  Sum_probs=107.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~  113 (176)
                      .....+|.+.+.+|+|+|+.|+.+.... ++..+|+|.+...+ +..+..++|+...+.+ +||||+++++.....- ..
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s-~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLS-TGHLYALKKILCHSQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDG   94 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccC-cccchhhheeeccchHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccC
Confidence            4456789999999999999999999888 88999999988754 6778899999999999 9999999987765421 12


Q ss_pred             cceEEEEEecCCCCChhhhcCC-----CCCChhh-H-hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP-----DELDLDN-L-QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~-~-~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+.||+++|...|+|.+.|+.     +-.++.. + .+.++.-+|+++|...- .-.|+|+||.||.
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NIL  161 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANIL  161 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeE
Confidence            4569999999999999999861     1222222 2 22267778999999981 2299999999984

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.65  E-value=1.5e-15  Score=114.57  Aligned_cols=122  Identities=12%  Similarity=0.022  Sum_probs=92.1

Q ss_pred             CeEEeeE--EeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYV--IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~--lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|.+.+.  +|+|+||.||++.... ++..+++|.+.......    .|..+...+.+|+|++++++.+..    .+..+
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~----~~~~~   85 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKP-TQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTT----LKGHV   85 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcC-CCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEec----CCeeE
Confidence            3455544  5999999999999987 78899999986532111    122222223379999999999988    78999


Q ss_pred             EEEecCCCCChhhhcCC-CCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP-DELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+++|+|.+++.. ...+.+.....  +...+|+++|..|+   +|+|++|+||-
T Consensus        86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil  141 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNI---IHNDIKLENVL  141 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEE
Confidence            99999999999999973 24444443332  66778999999998   99999999973

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.65  E-value=1.6e-15  Score=113.33  Aligned_cols=120  Identities=18%  Similarity=0.270  Sum_probs=95.3

Q ss_pred             eEEeecCCeeEEEEEecCCCC--eEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGN--KKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~--~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.||+|++|.||++.+....+  ..+++|.+....  .....+..|+.+++.+ +|+|++++++.+..     ...+++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-----~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-----HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-----CeEEEEE
Confidence            368999999999998754122  368999987653  3566789999999999 99999999998865     6789999


Q ss_pred             ecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||+++|+|.+++...   ..+.....  ..+...+|+++|..++   +|+|++|+||-
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~di~p~nil  129 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF---IHRDLAARNIL  129 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc---cccccCcccEE
Confidence            999999999998632   23333322  2266778999999998   99999999974

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.64  E-value=1e-15  Score=114.69  Aligned_cols=125  Identities=18%  Similarity=0.252  Sum_probs=96.4

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec---C---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI---N---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~---~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +|.+.+.||+|+||.||++.+.. .+...++|.+..   .   ......+..|+.+++.+ +|||++++++.+..    .
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   74 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKK-AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLE----R   74 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecC-CCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhc----C
Confidence            48899999999999999998876 554455555432   1   12334567788899998 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-----CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-----PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++++|.+++.     ....+.+...  ..+...+|.++|..|+   +|+|++|+||-
T Consensus        75 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~h~~l~~~nil  138 (260)
T cd08222          75 DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI---LHRDLKAKNIF  138 (260)
T ss_pred             CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc---cccCCChhheE
Confidence            78999999999999998874     1223333322  2266678999999999   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.64  E-value=2.9e-15  Score=114.80  Aligned_cols=131  Identities=17%  Similarity=0.217  Sum_probs=100.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc---
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH---  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~---  111 (176)
                      .-+.|++.+.||+|+||.||++.... ++..+|+|.+....   .....+.+|+.+++.+ .|+|++++++.+....   
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKK-TKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPY   87 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECC-CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecccccc
Confidence            34569999999999999999999987 78899999886532   2234567899999999 9999999999886631   


Q ss_pred             -CCcceEEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -QTHSEIWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ......+++|||++ ++|.+++...  ....+...  ..+...+|+|+|..++   +|+||+|+||.
T Consensus        88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---~H~dl~p~nil  151 (310)
T cd07865          88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKI---LHRDMKAANIL  151 (310)
T ss_pred             cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEE
Confidence             11245699999997 5787777522  33333322  2267778999999988   99999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.64  E-value=4.5e-15  Score=115.34  Aligned_cols=129  Identities=19%  Similarity=0.237  Sum_probs=99.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCC--CeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNG--NKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +|++.+.||+|+||.||.+.+.. .  +..+|+|.+...   ......+..|+.++..+.+|+||+++++.+........
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAE-TSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCC-CCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            48899999999999999999976 6  778999988642   12345678899999988569999999987644211135


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++++||++ ++|.+++. ....+......  .+++.+|+|+|..|+   +|+|++|+||.
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi---vH~dlkp~Nil  137 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANV---LHRDLKPGNLL  137 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHeE
Confidence            6889999986 68988885 33444443322  377788999999998   99999999984

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.64  E-value=2e-15  Score=117.86  Aligned_cols=131  Identities=22%  Similarity=0.337  Sum_probs=102.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      ..++|.+...||+|+||.||.+.+.. .+..+++|.+...   ......+.+|+.+++.+ .|+|++++.+.+....  .
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTK-TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLE   90 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECC-CCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccccc
Confidence            45679999999999999999999987 7889999987653   22345677899999998 9999999998876511  0


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++++||+ +++|.+++.....+.+....  .+...+|+++|..|+   +|+|++|+||.
T Consensus        91 ~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi---~H~dlkp~Nil  150 (343)
T cd07851          91 DFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGI---IHRDLKPSNIA  150 (343)
T ss_pred             ccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence            012389999998 57999988754444443322  267778999999998   99999999974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.64  E-value=2.1e-15  Score=114.26  Aligned_cols=123  Identities=20%  Similarity=0.286  Sum_probs=100.4

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      |++.+.||.|++|.||++.+.. .+..+++|.+....   .....+.+|+.+++.+ +|+|++++++.+..    .+..+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~----~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKL-TGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHS----ENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcC-CCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheecc----CCeEE
Confidence            5678899999999999999987 78899999887542   2335678899999999 99999999999988    78999


Q ss_pred             EEEecCCCCChhhhcCCC---CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPD---ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~---~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||++ ++|.+++...   ..+......  .+...+|+|+|..++   +|+|++|+||.
T Consensus        75 iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~---~H~dl~p~nil  131 (283)
T cd07835          75 LVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV---LHRDLKPQNLL  131 (283)
T ss_pred             EEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCCCHHHEE
Confidence            9999995 6899888622   334433322  266778999999988   99999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.63  E-value=1.3e-15  Score=118.62  Aligned_cols=130  Identities=18%  Similarity=0.227  Sum_probs=102.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..++|++.+.||+|+||.||+|.+.. .+..+++|.+...   ......+..|+.++..+.+|+||+++++.+....  .
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--~   81 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRR-TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--D   81 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcC-CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC--C
Confidence            45679999999999999999999877 7889999987542   2234456789999998778999999999886421  4


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||++ ++|.+++.....+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---~H~dl~p~nil  139 (337)
T cd07852          82 KDIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNV---IHRDLKPSNIL  139 (337)
T ss_pred             ceEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            56899999997 59988886443343332  23367778999999998   99999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG1167|consensus

Probab=99.63  E-value=1.5e-16  Score=122.93  Aligned_cols=135  Identities=18%  Similarity=0.168  Sum_probs=111.4

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      .+.++...+.|..+++||+|+|+.||++.+..+  ....+|+|.+...+ ....+.+|+.++..+.++.||+++.+++..
T Consensus        28 ~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rn  106 (418)
T KOG1167|consen   28 RQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRN  106 (418)
T ss_pred             HhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence            344666777899999999999999999987541  34689999987764 235589999999999899999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .....+|+||+++-...+++..-....-..+....+.+|+++|.+||   ||||+||+|+.
T Consensus       107 ----nd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GI---vHRDiKpsNFL  164 (418)
T KOG1167|consen  107 ----NDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGI---VHRDIKPSNFL  164 (418)
T ss_pred             ----CCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCc---cccCCCccccc
Confidence                88999999999999999998643344333345577889999999999   99999999984

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.63  E-value=3.6e-15  Score=110.85  Aligned_cols=118  Identities=17%  Similarity=0.276  Sum_probs=97.6

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ||+|+||.||.+.+.. .+..+++|.+....    .....+..|+.+++.+ .|+|++++++.+..    +..++++|||
T Consensus         1 lg~G~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKD-TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQT----EEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECC-CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeec----CCeeEEEEec
Confidence            6899999999999877 78899999987642    2455788899999999 89999999999988    7899999999


Q ss_pred             CCCCChhhhcCCC-CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPD-ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~-~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++++|.+++... ..+.....  ..+.+.++.++|..++   +|.|++|+||-
T Consensus        75 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~---~H~~l~p~ni~  125 (250)
T cd05123          75 APGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGI---IYRDLKPENIL  125 (250)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCcceEE
Confidence            9999999999732 33433322  2267788999999888   99999999974

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0695|consensus

Probab=99.63  E-value=2.9e-16  Score=119.29  Aligned_cols=127  Identities=20%  Similarity=0.261  Sum_probs=108.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..|.++++||+|+|.+|..+.... +...+|+|++++.    .+...+++.|-.++...++||.++.++.+|.+    ..
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~-t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt----es  324 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKK-TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT----ES  324 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcc-cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc----cc
Confidence            468999999999999999999988 8899999998863    34677889999999998899999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|.||++||+|.=-++ ...+.....++.  ++.++|.|+|..||   ||||+|-+||.
T Consensus       325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgi---iyrdlkldnvl  383 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGI---IYRDLKLDNVL  383 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCe---eeeeccccceE
Confidence            9999999999999965555 344444444444  77889999999999   99999999985

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.63  E-value=4.3e-15  Score=114.16  Aligned_cols=127  Identities=18%  Similarity=0.269  Sum_probs=97.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCC-CCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQN-GNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +|.+.+.||+|+||.||++.+..+ .+..+|+|.+....    .....+..|+.++..+ +|+|++++++.+....  ..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~--~~   77 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHA--DK   77 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCC--Cc
Confidence            488899999999999999998641 35789999987632    2345678899999999 9999999999998711  27


Q ss_pred             eEEEEEecCCCCChhhhcCC----C--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP----D--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~----~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++ ++.+++..    .  .......  ...+...+|.|+|..++   +|+|++|+||.
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~h~dlkp~Nil  140 (316)
T cd07842          78 SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV---LHRDLKPANIL  140 (316)
T ss_pred             eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE---eeCCCCHHHEE
Confidence            89999999974 67766641    1  2222222  22367778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.63  E-value=3.6e-15  Score=114.77  Aligned_cols=127  Identities=24%  Similarity=0.336  Sum_probs=101.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +...|...+.||+|+||.||.+.+.. .+..+++|.+...    ......+..|+.+++.+ +|+|++++.+.+..    
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   86 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLR----   86 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcC-CCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEc----
Confidence            45568888999999999999999987 7788999988642    22345678899999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||+. |++.+++.  ....+....  ...+.+.++.++|..++   +|+||+|+||-
T Consensus        87 ~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i---~H~dl~p~nil  147 (308)
T cd06634          87 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNIL  147 (308)
T ss_pred             CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHhEE
Confidence            788999999997 67877764  222333222  22366778999999988   99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4645|consensus

Probab=99.63  E-value=5.6e-17  Score=139.24  Aligned_cols=131  Identities=21%  Similarity=0.345  Sum_probs=109.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .....-+++....||.|.||.||.+.... +|+..|+|.+....   ...+.+..|+.++..+ .|||+|+++|.-..  
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~-tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvH-- 1305 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLD-TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVH-- 1305 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCC-ccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCceeec--
Confidence            34455567788999999999999999988 89999999887542   3455689999999999 99999999999888  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCC-CCC--hhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPD-ELD--LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~--~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+..+|.||||.+|+|.+.++.+ -++  ....+..+.+-+++|||..||   ||||+||.|+-
T Consensus      1306 --Rekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gI---VHRDIK~aNI~ 1366 (1509)
T KOG4645|consen 1306 --REKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGI---VHRDIKPANIL 1366 (1509)
T ss_pred             --HHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCc---eecCCCcccee
Confidence              89999999999999999999733 222  322334478889999999999   99999999974

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.63  E-value=3.1e-15  Score=113.32  Aligned_cols=124  Identities=21%  Similarity=0.210  Sum_probs=98.0

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      |++.+.||+|++|.||+|.... .+..+++|.+....  .......+|+..+..+.+|+|++++++.+..    .+..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~----~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE-TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE----NDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC-CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc----CCcEEE
Confidence            6788999999999999999977 77899999876532  1223345688888888339999999999988    789999


Q ss_pred             EEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||+ +|+|.+++...   ........  ..+...+|.|+|.+++   +|+|++|+||-
T Consensus        76 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i---~H~dl~~~ni~  131 (283)
T cd07830          76 VFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF---FHRDLKPENLL  131 (283)
T ss_pred             EEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChhhEE
Confidence            99999 78998888632   33333322  2266778999999998   99999999974

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.63  E-value=4.7e-15  Score=112.51  Aligned_cols=119  Identities=15%  Similarity=0.084  Sum_probs=90.0

Q ss_pred             EEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHH---HHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          47 VIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYR---MLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~---~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      .||+|+||.||++.+.. ++..+|+|.+....    .....+..|..   .+... .|++++.+.+.+..    .+..++
T Consensus         1 ~ig~g~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~----~~~~~~   74 (278)
T cd05606           1 IIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHT----PDKLSF   74 (278)
T ss_pred             CcccCCCeEEEEEEEec-CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeec----CCEEEE
Confidence            37999999999999877 78899999987532    11112333333   33334 79999999999988    788999


Q ss_pred             EEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||++||+|.+++. ........+...  +...++.|+|..++   +|+|++|+||.
T Consensus        75 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~di~p~nil  129 (278)
T cd05606          75 ILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFV---VYRDLKPANIL  129 (278)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EcCCCCHHHEE
Confidence            999999999998886 333444343332  66778999999988   99999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.63  E-value=5.8e-15  Score=113.59  Aligned_cols=114  Identities=20%  Similarity=0.189  Sum_probs=90.9

Q ss_pred             CCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCC
Q psy9091          52 VCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMP  128 (176)
Q Consensus        52 ~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~  128 (176)
                      +++.||.+.... ++..+|+|.+...   ......+..|+.+++.+ +|+||+++++.+..    .+..+++|||+++|+
T Consensus        12 ~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~   85 (314)
T cd08216          12 DLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIV----DSELYVVSPLMAYGS   85 (314)
T ss_pred             CCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeec----CCeEEEEEeccCCCC
Confidence            445566666655 6789999998754   34566789999999999 99999999999988    788999999999999


Q ss_pred             hhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         129 PPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       129 L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |.+++..   ...+....  ...++..+|+|+|..++   +|+|++|+||-
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i---vH~dlk~~Nil  133 (314)
T cd08216          86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGF---IHRSVKASHIL  133 (314)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCcceEE
Confidence            9999862   22333332  22377788999999998   99999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.62  E-value=4.9e-15  Score=111.51  Aligned_cols=126  Identities=19%  Similarity=0.353  Sum_probs=96.5

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-----------hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-----------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-----------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      |++.+.||+|+||.||.+.+..+.+..+++|.+...           ......+..|+.++....+|+|++++++.+.. 
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-   80 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE-   80 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc-
Confidence            788899999999999999986523578999987532           12344567788877753399999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                         .+..+++|||+++++|.+++.     ....+....  ...+...+|.++|. .++   +|+|++|+||-
T Consensus        81 ---~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i---~H~dl~~~nil  146 (269)
T cd08528          81 ---NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRI---VHRDLTPNNIM  146 (269)
T ss_pred             ---CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCce---eecCCCHHHEE
Confidence               789999999999999998874     122333221  12266778999995 667   99999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.62  E-value=3.3e-15  Score=115.78  Aligned_cols=128  Identities=25%  Similarity=0.301  Sum_probs=101.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~~~  116 (176)
                      +|.+.+.||+|++|.||++.... .+..+++|.+...   ......+..|+.+++.+ +|+||+++.+.+.... .....
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~   78 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR-TGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND   78 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC-CCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence            48899999999999999999877 7889999988753   23456788999999999 8999999999987721 11237


Q ss_pred             EEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|++|||++ ++|.+++.. ........  ...+...+|+++|..|+   +|+|++|+||.
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi---~H~dlkp~nil  135 (330)
T cd07834          79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANV---IHRDLKPSNIL  135 (330)
T ss_pred             eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            899999998 588888863 23344332  22367778999999998   99999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.61  E-value=7.3e-15  Score=110.69  Aligned_cols=129  Identities=18%  Similarity=0.247  Sum_probs=96.0

Q ss_pred             eEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTH  114 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~  114 (176)
                      |.+.+.||+|+||.||++.+..+  ++..+|+|.+...   ......+.+|+.+++.+ +|+|++++++.+....  +..
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcc
Confidence            56778999999999999986431  3578999988753   23455688999999999 9999999999876521  111


Q ss_pred             ceEEEEEecCCCCChhhhcCC-----C--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-----D--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-----~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++++||+.+|+|.+++..     .  ..+.+..  ...+...+|+|+|..++   +|+|++|+||-
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~H~dikp~nil  145 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNF---IHRDLAARNCM  145 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccchhhEE
Confidence            235789999999999887641     1  1222222  22366778999999988   99999999973

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0671|consensus

Probab=99.61  E-value=9.3e-16  Score=117.50  Aligned_cols=138  Identities=14%  Similarity=0.196  Sum_probs=110.6

Q ss_pred             CcccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-C----Ccce
Q psy9091          28 DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-S----NIPD  102 (176)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-~----niv~  102 (176)
                      .+..++.-....++|.+...+|+|+||.|..|.+.. .+..+|+|+++.-.++.++.+.|+.++.++..+ |    .++.
T Consensus        77 GH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~-~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~  155 (415)
T KOG0671|consen   77 GHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRE-TKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQ  155 (415)
T ss_pred             ceEEEEeccccccceehhhhhcCCcccceEEEeecC-CCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence            344444445557889999999999999999999988 788999999998888999999999999998422 1    4566


Q ss_pred             eceeEEeccCCcceEEEEEecCCCCChhhhcCCCCC---ChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         103 FFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDEL---DLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       103 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++|..    .+++|||+|.+ |-|++|||+.+..   .....  ..+|.+.+++++|..++   +|-||||+||.
T Consensus       156 m~~wFdy----rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl---~HTDLKPENIL  224 (415)
T KOG0671|consen  156 MRDWFDY----RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL---THTDLKPENIL  224 (415)
T ss_pred             eehhhhc----cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce---eecCCChheEE
Confidence            6777877    79999999987 5799999985322   22222  33377889999999999   99999999984

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.61  E-value=8.2e-15  Score=112.84  Aligned_cols=122  Identities=17%  Similarity=0.251  Sum_probs=90.9

Q ss_pred             eeEEeecCCeeEEEEEecCC-CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          45 GYVIGSGVCADVYEALDTQN-GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ...||+|+||.||+|..... .+..+|+|.+.... ....+.+|+.+++.+ +|+|++++++.+...  ....++++|||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLREL-KHPNVIALQKVFLSH--SDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhC-CCCCeeeEEEEEecc--CCCeEEEEEee
Confidence            36899999999999986430 34689999886543 224577899999999 999999999988642  15678999999


Q ss_pred             CCCCChhhhcCC----------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKP----------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~----------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++ ++|.+++..          ........  ...+.+.+|+|+|..++   +|+|+||+||.
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i---vH~Dlkp~Nil  140 (317)
T cd07867          82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV---LHRDLKPANIL  140 (317)
T ss_pred             eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE---EcCCCCHHHEE
Confidence            87 577777631          01222121  22367778999999998   99999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.60  E-value=4.1e-15  Score=112.42  Aligned_cols=123  Identities=20%  Similarity=0.309  Sum_probs=101.2

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      |+..+.||+|.+|.||.|.... ++..+++|.+...   ......+..|+.+++.+ .|+|++++++.+..    ...++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~----~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKK-TGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHT----ERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeecC-CCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhc----CCceE
Confidence            5677889999999999999987 7889999998764   22345678899999998 89999999999988    78899


Q ss_pred             EEEecCCCCChhhhcCCC--CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPD--ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~--~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||++ ++|.+++...  ..+......  .+...+|+++|..++   +|+|++|+||.
T Consensus        75 ~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~~l~~~ni~  130 (282)
T cd07829          75 LVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRI---LHRDLKPQNIL  130 (282)
T ss_pred             EEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChheEE
Confidence            9999998 5899998632  344433322  266778999999998   99999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.60  E-value=1e-14  Score=111.76  Aligned_cols=130  Identities=15%  Similarity=0.245  Sum_probs=99.1

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc----
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH----  111 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~----  111 (176)
                      .++|.+.+.||+|+||.||.+.+.. ++..+++|.+....   .....+.+|+.+++.+ +|+|++++++.+....    
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIK-TGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECC-CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheeccccccc
Confidence            3679999999999999999999987 78899999886532   1234567899999999 9999999998875521    


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....++++|||+++ ++...+..  ...+.....  ..+...+|+|+|..|+   +|+|++|+||.
T Consensus        85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i---~H~dl~p~nil  147 (311)
T cd07866          85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHI---LHRDIKAANIL  147 (311)
T ss_pred             ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            113457999999974 67666642  233333322  2367778999999998   99999999984

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.59  E-value=2.3e-14  Score=109.51  Aligned_cols=131  Identities=18%  Similarity=0.220  Sum_probs=100.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +....+.|.+.+.||+|+||.||++.+.. ++..+++|.+....  .....+..|+.++....+|+|++++++.+..   
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~---   85 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFKK-TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT---   85 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEECC-CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec---
Confidence            34455679999999999999999999987 78899999987542  2345567777766666469999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                       ....+++|||++ +.+.+++.  ....+....  ...+...+|+|+|. .++   +|+|++|+||-
T Consensus        86 -~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i---~H~dl~p~nil  147 (296)
T cd06618          86 -DSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV---IHRDVKPSNIL  147 (296)
T ss_pred             -CCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE---ecCCCcHHHEE
Confidence             788999999986 56666654  223333222  23367778999997 577   99999999973

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0584|consensus

Probab=99.59  E-value=1.5e-15  Score=122.41  Aligned_cols=133  Identities=22%  Similarity=0.338  Sum_probs=107.1

Q ss_pred             CCCCCeE-EeeEEeecCCeeEEEEEecCCCCeEEEEEEeec-----ChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYE-LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI-----NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~-~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~-----~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ++..+|. ....||+|+|.+||+|.+.. .|-.||...+..     .+...+.+..|+.+++.| +|+||++++..|.+.
T Consensus        36 ~p~gRy~k~~evLGrGafKtVYka~De~-~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   36 DPTGRYLKFDEVLGRGAFKTVYKAFDEE-EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDT  113 (632)
T ss_pred             CCCCceeehhhhcccccceeeeeccccc-cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecC
Confidence            4444454 55899999999999999977 777777655443     245678899999999999 999999999999885


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .  ...+-+|+|.+..|+|..|++ -...+......|  +++.+|.|||.+. +.+||||||=+||-
T Consensus       114 ~--n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIF  177 (632)
T KOG0584|consen  114 D--NKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIF  177 (632)
T ss_pred             C--CceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEE
Confidence            3  355889999999999999987 345555555555  7888999999865 58899999999984

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.59  E-value=6.6e-15  Score=109.22  Aligned_cols=111  Identities=14%  Similarity=0.140  Sum_probs=87.0

Q ss_pred             cCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChh
Q psy9091          51 GVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPP  130 (176)
Q Consensus        51 G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~  130 (176)
                      |.+|.||.+.+.. ++..+++|.+.....    ...+...+... .|+|++++++.+..    .+..+++|||+++|+|.
T Consensus         4 g~~~~v~~~~~~~-~~~~~~~K~i~~~~~----~~~~~~~~~~~-~~~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTR-TQQTFILKGLRKSSE----YSRERLTIIPH-CVPNMVCLHKYIVS----EDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEcc-CCcEEEEEeecchhh----hhhHHHHHHhc-CCCceeehhhheec----CCeEEEEEecCCCCCHH
Confidence            8999999999988 888999999876532    22344444444 79999999999988    78999999999999999


Q ss_pred             hhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         131 RALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       131 ~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++. ....+.....  ..+...+|.|+|..++   +|+|+||+||-
T Consensus        74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~Nil  117 (237)
T cd05576          74 SHISKFLNIPEECVKRWAAEMVVALDALHREGI---VCRDLNPNNIL  117 (237)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEE
Confidence            9886 2233333222  2366778999999988   99999999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.59  E-value=8.2e-15  Score=110.80  Aligned_cols=123  Identities=20%  Similarity=0.275  Sum_probs=99.6

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      |.+.+.||+|++|.||++.... .+..+++|.+....   .....+..|+.+++.+ +|+|++++++.+..    +..++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKL-TGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRH----KGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcCC-CCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhcc----CCCEE
Confidence            5677899999999999999876 78899999886542   2345678899999999 89999999999988    78899


Q ss_pred             EEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||+++ ++.+++..  ...+....  ...+...+|.++|..++   +|+|++|+||.
T Consensus        75 ~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~p~nil  130 (283)
T cd05118          75 LVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI---LHRDLKPENLL  130 (283)
T ss_pred             EEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe---eecCcCHHHEE
Confidence            99999974 88888763  23333332  22367778999999998   99999999974

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0696|consensus

Probab=99.59  E-value=6e-16  Score=120.24  Aligned_cols=127  Identities=16%  Similarity=0.194  Sum_probs=103.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..|..+.+||.|+||.|.++..+. +.+.+|+|+++..    .++.+--+.|-.+++...+-|.+++++.+|.+    -.
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkg-tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT----mD  423 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKG-TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT----MD  423 (683)
T ss_pred             cccceEEEeccCccceeeeecccC-cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh----hh
Confidence            358888999999999999999988 8899999998864    22333346677777776577899999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC---CCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK---PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+.||+|.--|+   ...+.....+..++..+|=+||.+||   ||||||-+||.
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgI---iYRDLKLDNvm  482 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVM  482 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCe---eeeeccccceE
Confidence            9999999999999977776   33444444455588889999999999   99999999985

>KOG1035|consensus

Probab=99.59  E-value=9.2e-16  Score=131.21  Aligned_cols=130  Identities=15%  Similarity=0.248  Sum_probs=104.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC----
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT----  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~----  113 (176)
                      +.|..++.||+|+||.||++..+- .|..+|+|.|+..  ......+.+|+.+++++ +|||||+|+..|......    
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKl-DGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKL-DGREYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecc-cchhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCccccc
Confidence            356778999999999999999988 8899999999876  33456789999999999 999999998765321100    


Q ss_pred             --------------------------------------------------------------------------------
Q psy9091         114 --------------------------------------------------------------------------------  113 (176)
Q Consensus       114 --------------------------------------------------------------------------------  113 (176)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------c--------ceEEEEEecCCCCChhhhcCCCCCC----hhhHhhhhhHHHHHHHHhc
Q psy9091         114 -----------------------H--------SEIWFVMQREAEMPPPRALKPDELD----LDNLQDCGDRYELGYVIGS  158 (176)
Q Consensus       114 -----------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~l~~lh~~  158 (176)
                                             .        ..+||.||||+.-.+.+++..+...    ..-+.+.+++-+|+|+|..
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~  716 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ  716 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence                                   1        4589999999998888888755443    3223455888899999999


Q ss_pred             CCCccccccCCCCCcc
Q psy9091         159 GVCADVYEALDTQNVT  174 (176)
Q Consensus       159 ~i~~~v~~~~~~~nv~  174 (176)
                      |+   |||||||.||-
T Consensus       717 gi---IHRDLKP~NIF  729 (1351)
T KOG1035|consen  717 GI---IHRDLKPRNIF  729 (1351)
T ss_pred             ce---eeccCCcceeE
Confidence            98   99999999984

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.58  E-value=1.7e-14  Score=112.59  Aligned_cols=129  Identities=21%  Similarity=0.328  Sum_probs=98.7

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      .++|...+.||+|+||.||+|.+.. ++..+|+|.+...   ......+..|+.+++.+ +|+||+++++.+....  ..
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKR-TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCC-CCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence            3579999999999999999999877 7889999988653   22345678899999998 9999999999986521  11


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....++++||+. ++|..++. ........  ...+...+|+++|..++   +|+|++|+||-
T Consensus        92 ~~~~~lv~e~~~-~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i---~H~dlkp~NIl  149 (342)
T cd07879          92 FQDFYLVMPYMQ-TDLQKIMG-HPLSEDKVQYLVYQMLCGLKYIHSAGI---IHRDLKPGNLA  149 (342)
T ss_pred             CceEEEEecccc-cCHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            245799999996 46766653 22333222  22367778999999998   99999999973

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.57  E-value=4.8e-14  Score=106.79  Aligned_cols=128  Identities=19%  Similarity=0.223  Sum_probs=95.4

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhcc--CCCCcceeceeEEeccC-Ccc
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKHQ-THS  115 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~~-~~~  115 (176)
                      |++.+.||+|+||.||++.+.. .+..+++|.+....   .....+..|+.++..+.  .|+|++++++.+..... ...
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN-TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC-CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            6788999999999999999977 78899999987532   12345667777776652  59999999999987210 112


Q ss_pred             eEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||++ ++|.+++..   ...+.....  ..++..+|+++|..++   +|+|++|+||.
T Consensus        80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i---~h~~l~~~nil  139 (287)
T cd07838          80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI---VHRDLKPQNIL  139 (287)
T ss_pred             eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCChhhEE
Confidence            3999999997 578888752   123333322  2267778999999998   99999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0614|consensus

Probab=99.57  E-value=1.8e-16  Score=125.50  Aligned_cols=126  Identities=12%  Similarity=0.140  Sum_probs=105.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..++.+..||-|+||.|-++.... ....+|+|++++.    .+..+.+..|-.+|..+ +++.|++++..|.+    ..
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~-~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd----~k  493 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNS-QKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRD----SK  493 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecc-cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhcc----ch
Confidence            357778899999999999988765 3345899988763    24556788899999998 89999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|++||-|-||.|+..|+ .+..+....+++  -+..+++|||++||   |||||||+|..
T Consensus       494 yvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~i---IYRDLKPENll  552 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGI---IYRDLKPENLL  552 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCc---eeccCChhhee
Confidence            9999999999999999998 666666555565  44668999999999   99999999963

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.57  E-value=1.3e-14  Score=104.56  Aligned_cols=118  Identities=19%  Similarity=0.091  Sum_probs=81.1

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---h------------------------HHHHHHHHHHHHhccCC
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---F------------------------IDDIKEEYRMLRDLSQH   97 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~------------------------~~~~~~e~~~~~~l~~h   97 (176)
                      ...||+|+||.||.|...  .+..+|+|.++....   .                        ......|+..+..+ .+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~--~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05147           2 NGCISTGKEANVYHATTA--NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VT   78 (190)
T ss_pred             CCccccccceEEEEEECC--CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HH
Confidence            357999999999999884  578999999875311   1                        11234588899988 77


Q ss_pred             CCcceeceeEEeccCCcceEEEEEecCCCCChhhh-cCCCCCChhhHh--hhhhHHHHHHH-HhcCCCccccccCCCCCc
Q psy9091          98 SNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRA-LKPDELDLDNLQ--DCGDRYELGYV-IGSGVCADVYEALDTQNV  173 (176)
Q Consensus        98 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~--~~~~~~~l~~l-h~~~i~~~v~~~~~~~nv  173 (176)
                      +++....... .     ...++||||++++++... +.....+.....  ..+...+|+++ |..|+   +|+|+||+||
T Consensus        79 ~~v~~p~~~~-~-----~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi---iHrDlkP~NI  149 (190)
T cd05147          79 AGIPCPEPIL-L-----KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRL---VHADLSEYNL  149 (190)
T ss_pred             CCCCCCcEEE-e-----cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHE
Confidence            7764433322 2     223899999998877554 333333332221  22566789999 68898   9999999998


Q ss_pred             c
Q psy9091         174 T  174 (176)
Q Consensus       174 ~  174 (176)
                      .
T Consensus       150 l  150 (190)
T cd05147         150 L  150 (190)
T ss_pred             E
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.56  E-value=1.4e-14  Score=110.13  Aligned_cols=125  Identities=14%  Similarity=0.207  Sum_probs=95.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .|.....||+|+||.||.+.+.. .+..+|+|.+....  .....+..|+.++..+.+|+|++++++.+..    ....+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~----~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKP-SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR----EGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECC-CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec----CCcEE
Confidence            46677889999999999999987 78899999887542  3455688899999888459999999999988    68899


Q ss_pred             EEEecCCCCChhhhcC------CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK------PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~------~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||++ +++.++..      .........  ...+...+|+|+|. .++   +|+|++|+||.
T Consensus        80 ~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i---~H~dlkp~Nil  140 (288)
T cd06616          80 ICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI---IHRDVKPSNIL  140 (288)
T ss_pred             EEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe---eccCCCHHHEE
Confidence            9999986 45544431      122333222  22366778999997 477   99999999974

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.55  E-value=5.5e-14  Score=101.30  Aligned_cols=118  Identities=20%  Similarity=0.220  Sum_probs=82.3

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---------------------------hHHHHHHHHHHHHhccCC
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---------------------------FIDDIKEEYRMLRDLSQH   97 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---------------------------~~~~~~~e~~~~~~l~~h   97 (176)
                      ...||+|+||.||+|.+.  ++..+|+|.++....                           .......|...+..+ .+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~--~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05145           2 NGCISTGKEANVYHARTG--DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YE   78 (190)
T ss_pred             CceeecCCCcEEEEEEcC--CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-Hh
Confidence            468999999999999875  478999999876410                           012235788888888 88


Q ss_pred             CCcceeceeEEeccCCcceEEEEEecCCCCChhhh-cCCCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCc
Q psy9091          98 SNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRA-LKPDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNV  173 (176)
Q Consensus        98 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv  173 (176)
                      +++.........      ..++||||++|+++... +.....+....  ...+...++.++|. .|+   +|+|+||+||
T Consensus        79 ~~i~~p~~~~~~------~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~gi---vHrDlkP~NI  149 (190)
T cd05145          79 AGVPVPEPILLK------KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGL---VHGDLSEYNI  149 (190)
T ss_pred             CCCCCceEEEec------CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCE---ecCCCChhhE
Confidence            887554444322      24899999998855433 33323322222  22266677999999 999   9999999998


Q ss_pred             c
Q psy9091         174 T  174 (176)
Q Consensus       174 ~  174 (176)
                      .
T Consensus       150 l  150 (190)
T cd05145         150 L  150 (190)
T ss_pred             E
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.54  E-value=8.8e-14  Score=102.43  Aligned_cols=124  Identities=8%  Similarity=-0.036  Sum_probs=94.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHH------HHHHHHHHHhccCCCCcceeceeEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDD------IKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~------~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      ..+|...+.+|.|+||.||.... .  +..+++|.+....    .....      +.+|+..+..+ .|+++..+...+.
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~--~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~  105 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-D--YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL  105 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-C--CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence            46799999999999999998765 2  4579999987532    12222      57898999998 9999999988866


Q ss_pred             eccC----CcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQ----THSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....    ..+..+++|||++|.+|.++...   +.  ....+...+++.+|..|+   +|+|++|+|+.
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~---~~--~~~~~i~~~l~~lH~~gi---~H~Dikp~Nil  167 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMPEI---SE--DVKAKIKASIESLHQHGM---VSGDPHKGNFI  167 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhhhc---cH--HHHHHHHHHHHHHHHcCC---ccCCCChHHEE
Confidence            5210    02358999999999999887421   11  123366778999999999   99999999974

>KOG0986|consensus

Probab=99.53  E-value=1.2e-14  Score=113.79  Aligned_cols=130  Identities=13%  Similarity=0.069  Sum_probs=105.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--h--hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--P--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      +...+.|..-+.||+|+||.|+.|.-+. +|.-+|.|.+...  +  .......+|-.++..+ ..+.||++-.+|.+  
T Consensus       181 pvt~n~F~~~RvlGkGGFGEV~acqvra-TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeT--  256 (591)
T KOG0986|consen  181 PVTKNTFRVYRVLGKGGFGEVCACQVRA-TGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFET--  256 (591)
T ss_pred             hccccceeeeEEEecccccceeEEEEec-chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecC--
Confidence            3344568888999999999999999988 8988998877653  1  1233468888899998 88999999999999  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC---CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK---PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+|+|+..|.||+|.==|-   ....+++...+.  ++..+|+.+|+.+|   |||||||+||.
T Consensus       257 --kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i---VYRDLKPeNIL  319 (591)
T KOG0986|consen  257 --KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI---VYRDLKPENIL  319 (591)
T ss_pred             --CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce---eeccCChhhee
Confidence              788999999999999954443   235566665555  67778999999999   99999999984

>KOG1345|consensus

Probab=99.53  E-value=7e-15  Score=108.79  Aligned_cols=130  Identities=17%  Similarity=0.193  Sum_probs=106.2

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceec-eeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFF-GAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~-~~~~~~~~~~~  115 (176)
                      ...+.|.+.+.+|+|-||.+.++.++. ....+++|.++...-....|.+|...--.|+.|.||+.-+ ..|.+    .+
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~-s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt----~d   95 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQ-SKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT----SD   95 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccC-CceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc----Cc
Confidence            445679999999999999999999988 8889999999887666778999998777777899998654 45566    67


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||+|.|+|.+-+.+...-+....  ..+.+-+|.|+|+..+   ||||||-+||.
T Consensus        96 ~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknl---VHRdlK~eNiL  153 (378)
T KOG1345|consen   96 AYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNL---VHRDLKAENIL  153 (378)
T ss_pred             eEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccch---hhcccccceEE
Confidence            88899999999999998875444333322  2266778999999999   99999999985

>KOG0200|consensus

Probab=99.53  E-value=6.3e-14  Score=117.08  Aligned_cols=134  Identities=21%  Similarity=0.284  Sum_probs=107.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCC--C----CeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQN--G----NKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~----~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      .|....+.+.+.+.+|+|+||.|+++.....  .    ...||+|.++..  ......+..|+.+|..+..|+|++++.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            4566666677788999999999999974310  1    347899988754  3457789999999999988999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccccc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      ++..    .+.+++|+||+.+|+|..+|+...                 +....+  ...|+..+++||.+..+   |||
T Consensus       370 ~~t~----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~---vHR  442 (609)
T KOG0200|consen  370 ACTQ----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC---VHR  442 (609)
T ss_pred             eecc----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc---cch
Confidence            9988    789999999999999999998333                 222111  22377888999999999   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      |++.+||-
T Consensus       443 DLAaRNVL  450 (609)
T KOG0200|consen  443 DLAARNVL  450 (609)
T ss_pred             hhhhhhEE
Confidence            99999984

>KOG1163|consensus

Probab=99.52  E-value=6.2e-14  Score=102.30  Aligned_cols=126  Identities=17%  Similarity=0.199  Sum_probs=94.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ...|.++++||+|+||.+|.+.... .|+.||+|.-.... ..+.+..|..+-..+.+...+..+......    ..+-.
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~-~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e----~~ynv   87 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISIT-SGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTE----KDYNV   87 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeecc-CCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccc----cccce
Confidence            4569999999999999999999988 89999999755432 234567788888877455677776666655    67788


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||+.+ |-+|.++..  ..........+.  |.+.-++|+|..+.   |||||||||..
T Consensus        88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~f---iHRDIKPdNFL  143 (341)
T KOG1163|consen   88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNF---IHRDIKPDNFL  143 (341)
T ss_pred             eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcc---ccccCCcccee
Confidence            999987 578888765  233333333333  33334999999999   99999999974

>KOG0666|consensus

Probab=99.51  E-value=6e-15  Score=110.94  Aligned_cols=125  Identities=21%  Similarity=0.274  Sum_probs=98.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeecChh---hHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKINPE---FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~~~~---~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .|+.+..||+|+||.||++.... ++    ..+|+|.+...++   ......+|+.+++.+ +|+|++++...|..-   
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~-~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~---   99 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKN-TNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSH---   99 (438)
T ss_pred             HhhccceecccccceeeEeeecc-CCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhcc---
Confidence            58889999999999999996543 22    2688888776532   355689999999999 999999999998762   


Q ss_pred             cceEEEEEecCCCCChhhhcC--C--CCCChhh----HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--P--DELDLDN----LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~--~~~~~~~----~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..+|+++||.++ +|+.+|+  +  ....++.    ...++++-++.|||++=+   +||||||.||.
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWv---lHRDLKPaNIl  164 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWV---LHRDLKPANIL  164 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhe---eeccCCcceEE
Confidence            6789999999985 7888886  1  1112222    234477888999999999   99999999985

>KOG0596|consensus

Probab=99.51  E-value=3.8e-14  Score=113.33  Aligned_cols=129  Identities=19%  Similarity=0.285  Sum_probs=100.5

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeec---ChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI---NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~---~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ......|+++++||+|+.+.||++....  ...+|+|.+..   +......+.+|+..+.++.+|.+|+.++++-.+   
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~--~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~---  431 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNSD--KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT---  431 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecCC--CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc---
Confidence            3445568889999999999999998754  34566554433   234677899999999999999999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChh--hHh-hh-hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLD--NLQ-DC-GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--~~~-~~-~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ++.+|+||||= .-+|..+|+......+  -++ .+ +-++++.++|..||   ||.||||-|+.
T Consensus       432 -d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI---VHSDLKPANFL  492 (677)
T KOG0596|consen  432 -DGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI---VHSDLKPANFL  492 (677)
T ss_pred             -CceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce---eecCCCcccEE
Confidence             89999999954 5789999873222111  122 22 77889999999999   99999999964

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.51  E-value=2.8e-13  Score=98.73  Aligned_cols=124  Identities=27%  Similarity=0.374  Sum_probs=101.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-h-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-E-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      |.+.+.||+|.+|.||++.... .+..+++|.+.... . ....+..|+..+..+ +|+|++.+++.+..    ....++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~----~~~~~~   74 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG-TGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFED----PEPLYL   74 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC-CCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeec----CCceEE
Confidence            5677899999999999999876 67899999987643 2 466788999999999 99999999999887    788999


Q ss_pred             EEecCCCCChhhhcCCCC--CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPDE--LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~--~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|++++++|.+++....  .+....  ...+...++.++|..++   +|+|++++||-
T Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~di~~~ni~  130 (225)
T smart00221       75 VMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI---VHRDLKPENIL  130 (225)
T ss_pred             EEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            999999999999986322  333222  22256667999999988   99999999974

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0603|consensus

Probab=99.51  E-value=1.3e-14  Score=117.33  Aligned_cols=126  Identities=19%  Similarity=0.222  Sum_probs=103.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +.+.|.+...+|.|+|+.|..|.+.. ++...++|++....   .....|+.++....+|+|++++++.+..    +.++
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~-t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~----~~~~  391 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSP-TDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYED----GKEI  391 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccc-cccchhheeccccc---cccccccchhhhhcCCCcceeecceecC----Ccee
Confidence            46678999999999999999999988 88889999987752   2234566666666699999999999999    8999


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+|||.+.||.+.+.+..........  -.++...++.|||++|+   ||||+||+||.
T Consensus       392 ~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gv---vhRDLkp~NIL  447 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGV---VHRDLKPGNIL  447 (612)
T ss_pred             eeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCe---eecCCChhhee
Confidence            99999999999999987444433333  33377788999999999   99999999984

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.51  E-value=2.2e-13  Score=111.04  Aligned_cols=133  Identities=18%  Similarity=0.265  Sum_probs=87.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC---------------CCCeEEEEEEeecChh-hH--------------HHHHHH
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ---------------NGNKKVSIKVQKINPE-FI--------------DDIKEE   87 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~---------------~~~~~~aik~i~~~~~-~~--------------~~~~~e   87 (176)
                      ..++|.+.++||+|+||.||+|....               ..+..+|+|.+..... ..              .....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            45689999999999999999996421               0235799999865321 11              123446


Q ss_pred             HHHHHhccCCCCc-----ceeceeEEecc----CCcceEEEEEecCCCCChhhhcCCCCC--------------------
Q psy9091          88 YRMLRDLSQHSNI-----PDFFGAYMKKH----QTHSEIWFVMQREAEMPPPRALKPDEL--------------------  138 (176)
Q Consensus        88 ~~~~~~l~~h~ni-----v~~~~~~~~~~----~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------  138 (176)
                      +.++..+ .|.++     +.+.+++....    -.....|+||||+++|+|.++|.....                    
T Consensus       223 ~~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~  301 (507)
T PLN03224        223 AYMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM  301 (507)
T ss_pred             HHHHHHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence            6666666 44433     45555553210    013568999999999999998852110                    


Q ss_pred             -----ChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         139 -----DLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       139 -----~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                           +....  ...+...+|.|+|..++   +|+|+||+||.
T Consensus       302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~i---vHrDLKp~NIL  341 (507)
T PLN03224        302 PQDKRDINVIKGVMRQVLTGLRKLHRIGI---VHRDIKPENLL  341 (507)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCchHhEE
Confidence                 00011  12256668999999988   99999999984

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.50  E-value=4.1e-13  Score=96.19  Aligned_cols=118  Identities=25%  Similarity=0.438  Sum_probs=97.3

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCC
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREA  125 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~  125 (176)
                      ||+|.+|.+|++.... .+..+++|.......  ....+.+|+..+..+ .|++++++++.+..    ....++++|+++
T Consensus         1 l~~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~----~~~~~~~~e~~~   74 (215)
T cd00180           1 LGEGGFGTVYLARDKK-TGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFED----ENHLYLVMEYCE   74 (215)
T ss_pred             CCcCCceEEEEEEecC-CCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeec----CCeEEEEEecCC
Confidence            5899999999999976 688999999887543  346789999999999 99999999999988    688999999999


Q ss_pred             CCChhhhcCCC--CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         126 EMPPPRALKPD--ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       126 ~g~L~~~l~~~--~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|.+++...  ..+......  .+...+++++|..++   +|.|++|+||.
T Consensus        75 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---~H~dl~~~ni~  124 (215)
T cd00180          75 GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI---IHRDLKPENIL  124 (215)
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHhhEE
Confidence            99999998632  344433222  255667999999988   99999999984

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1151|consensus

Probab=99.49  E-value=1.2e-14  Score=114.03  Aligned_cols=133  Identities=20%  Similarity=0.256  Sum_probs=105.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--------hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      +.-.++|-++..||+|+|+.||++.+.. ..+.+|+|+-...        ..+.+...+|..+++.| +||.||+++++|
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~-EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyf  536 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLT-EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYF  536 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccc-hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeee
Confidence            4445689999999999999999999987 6678899875432        13577889999999999 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .-.   ...+|-|+|||+|.+|.=+|+ ..+......  ...++..+|.||-... ..+||=||||.||.
T Consensus       537 slD---tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNIL  602 (775)
T KOG1151|consen  537 SLD---TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNIL  602 (775)
T ss_pred             eec---cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEE
Confidence            763   566899999999999988887 334443332  3337777899998654 57899999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.48  E-value=2.2e-13  Score=112.86  Aligned_cols=129  Identities=20%  Similarity=0.296  Sum_probs=82.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCC----CeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec--c
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNG----NKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK--H  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~--~  111 (176)
                      ..+.|.+.+.||+|+||.||+|.+.. +    +..+|+|.+..... ...+..+ . +... .+.++..+...+...  .
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~-~~~~~~~~vAvK~~~~~~~-~e~~~~e-~-l~~~-~~~~~~~~~~~~~~~~~~  204 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVN-KQSKKEGKYVLKKATEYGA-VEIWMNE-R-VRRA-CPNSCADFVYGFLEPVSS  204 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcC-CccccCcEEEEEEecccch-hHHHHHH-H-HHhh-chhhHHHHHHhhhccccc
Confidence            45679999999999999999999977 6    78899998764321 1111111 1 1111 112222221111100  0


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCC--hh---------------------hHhhhhhHHHHHHHHhcCCCccccccC
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELD--LD---------------------NLQDCGDRYELGYVIGSGVCADVYEAL  168 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~--~~---------------------~~~~~~~~~~l~~lh~~~i~~~v~~~~  168 (176)
                      ......++++||+++++|.+++......  ..                     .....+.+.+|.|+|..+|   +||||
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI---iHRDL  281 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI---VHRDV  281 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE---EeCcC
Confidence            1157799999999999999988622110  00                     0123366778999999988   99999


Q ss_pred             CCCCcc
Q psy9091         169 DTQNVT  174 (176)
Q Consensus       169 ~~~nv~  174 (176)
                      ||+||.
T Consensus       282 KP~NIL  287 (566)
T PLN03225        282 KPQNII  287 (566)
T ss_pred             CHHHEE
Confidence            999973

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.47  E-value=9.3e-13  Score=100.78  Aligned_cols=132  Identities=16%  Similarity=0.235  Sum_probs=85.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCC---CeEEEEEEeecChhh------------HHHHHHHHHHHHhccCCCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNG---NKKVSIKVQKINPEF------------IDDIKEEYRMLRDLSQHSNIP  101 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aik~i~~~~~~------------~~~~~~e~~~~~~l~~h~niv  101 (176)
                      .....|++.+.||+|+||.||+|.+.. .   ...+++|........            ......+...+..+ .|+|++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~   86 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCAS-DHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIP   86 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcC-CcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCC
Confidence            344679999999999999999999866 4   456677754432110            01122233344555 899999


Q ss_pred             eeceeEEeccCCcceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         102 DFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++.+..........++++|++. .++.+++.. ........  ...+.+.+|+|+|..++   +||||||+||.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---iHrDiKp~Nil  158 (294)
T PHA02882         87 KYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGI---SHGDIKPENIM  158 (294)
T ss_pred             cEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            999876652211234577888775 455555542 11222221  23377788999999988   99999999984

>smart00090 RIO RIO-like kinase

Probab=99.46  E-value=3.9e-13  Score=100.07  Aligned_cols=131  Identities=19%  Similarity=0.101  Sum_probs=90.5

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEE-ecCCCCeEEEEEEeecChh-------------------------hHHHHHH
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEAL-DTQNGNKKVSIKVQKINPE-------------------------FIDDIKE   86 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~~~~aik~i~~~~~-------------------------~~~~~~~   86 (176)
                      .++...+..|.+.+.||+|+||.||.|. +.. ++..+|+|.++....                         ....+..
T Consensus        21 ~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~-~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (237)
T smart00090       21 YSLLNRGILSAIGGCISTGKEANVYHALDFDG-SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK   99 (237)
T ss_pred             HHHHhcCchHHhCCeeccCcceeEEEEEecCC-CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence            3444555668899999999999999998 445 688999999875310                         0123567


Q ss_pred             HHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcC-CCCCChhh--HhhhhhHHHHHHHHhcC-CCc
Q psy9091          87 EYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDN--LQDCGDRYELGYVIGSG-VCA  162 (176)
Q Consensus        87 e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~--~~~~~~~~~l~~lh~~~-i~~  162 (176)
                      |+..+..+ .+.+ +.....+..     ...++||||++|++|..... ....+...  ....+...+++++|..| +  
T Consensus       100 E~~~L~~L-~~~~-i~~p~~~~~-----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i--  170 (237)
T smart00090      100 EFRNLQRL-YEAG-VPVPKPIAW-----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGEL--  170 (237)
T ss_pred             HHHHHHHH-HhcC-CCCCeeeEe-----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCE--
Confidence            99999988 5432 222333333     23489999999988876642 22222211  22337777899999999 8  


Q ss_pred             cccccCCCCCcc
Q psy9091         163 DVYEALDTQNVT  174 (176)
Q Consensus       163 ~v~~~~~~~nv~  174 (176)
                       +|+|+||+||.
T Consensus       171 -iH~Dikp~NIl  181 (237)
T smart00090      171 -VHGDLSEYNIL  181 (237)
T ss_pred             -EeCCCChhhEE
Confidence             99999999984

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.46  E-value=4.9e-13  Score=97.51  Aligned_cols=117  Identities=15%  Similarity=0.124  Sum_probs=87.7

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----h-----hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----E-----FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~-----~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.||+|++|.||.|.+   .+..+++|......    .     ....+.+|+.++..+ .|+++......+..    ...
T Consensus         2 ~~l~~G~~~~vy~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~----~~~   73 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF---LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVD----PEN   73 (211)
T ss_pred             cccccCceEEEEEEee---CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEe----CCC
Confidence            5789999999999987   34678888755321    0     123578899999998 88888777666666    567


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||++|++|.+++..... .......+...+|.++|..++   +|+|++|+||.
T Consensus        74 ~~lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i---~H~Dl~p~Nil  127 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGI---IHGDLTTSNMI  127 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCc---ccCCCCcccEE
Confidence            8999999999999998853221 111223356667999999998   99999999984

>KOG0669|consensus

Probab=99.44  E-value=7.3e-16  Score=112.98  Aligned_cols=134  Identities=20%  Similarity=0.251  Sum_probs=102.1

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--h-hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--P-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ..+..++|....++|+|.||.|+++.... ++..||+|.+-..  + .+.....+|+.++..+ .|+|+++++..|.++.
T Consensus        12 ~~~~~~~yek~~kigqGtfgeVFkAr~~n-~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~   89 (376)
T KOG0669|consen   12 FCDEVSKYEKLAKIGQGTFGEVFKARSKN-TGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKA   89 (376)
T ss_pred             ceecchHHHHHHhcCCchHHHHHHHhhcC-ccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhcc
Confidence            45556788989999999999999999887 7777888765442  1 2456678999999999 9999999999887655


Q ss_pred             ----CCcceEEEEEecCCCCChhhhcCCC--CCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 ----QTHSEIWFVMQREAEMPPPRALKPD--ELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ----~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .....+|+|+.+|++ +|..+|...  ......  ..+.+..-+|.|+|+..+   +|||||+.||.
T Consensus        90 Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~ki---lHRDmKaaNvL  156 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKI---LHRDMKAANVL  156 (376)
T ss_pred             CCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhH---HhhcccHhhEE
Confidence                223459999999985 677777522  222211  123355668999999999   99999999985

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.44  E-value=1.6e-12  Score=107.33  Aligned_cols=119  Identities=18%  Similarity=0.117  Sum_probs=87.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEe-ec---Ch-----hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQ-KI---NP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i-~~---~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ..|...+.||+|+||.||++.+.. ..  +++|.. ..   ..     .....+.+|+.++..+ +|++++.....+.. 
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~-  407 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLG-RD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVD-  407 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecC-cc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEe-
Confidence            344567899999999999998754 32  333322 11   11     1234678999999999 99998877666655 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....+++|||++|++|.+++.     .......+...+|.++|..++   +|+|+||+||.
T Consensus       408 ---~~~~~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~~gi---iHrDlkp~NIL  460 (535)
T PRK09605        408 ---PEEKTIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHKAGI---VHGDLTTSNFI  460 (535)
T ss_pred             ---CCCCEEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHhCCC---ccCCCChHHEE
Confidence               566889999999999998874     111223366778999999998   99999999984

>KOG1165|consensus

Probab=99.43  E-value=3.9e-13  Score=102.12  Aligned_cols=128  Identities=16%  Similarity=0.239  Sum_probs=96.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...-.|.+.++||+|+||.++.|...- ++++||||.-+..+ ....+..|...-+.|.+.++|...+-....    +.+
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~-nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~GIP~vYYFGqe----G~~   98 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLY-NNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTEGIPQVYYFGQE----GKY   98 (449)
T ss_pred             EecccceeccccccCcceeeecccccc-cCceEEEEeccccC-CcchHHHHHHHHHHHcCCCCCCceeeeccc----cch
Confidence            445579999999999999999999887 78999999755433 345577788877877677888887766555    677


Q ss_pred             EEEEEecCCCCChhhhcC--CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      -.||+|++ |-+|.|+..  ........+.+.  +.+--++++|.+.+   ||||+||+|..
T Consensus        99 NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~L---IYRDIKPdNFL  156 (449)
T KOG1165|consen   99 NILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDL---IYRDIKPDNFL  156 (449)
T ss_pred             hhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcce---eecccCcccee
Confidence            88999987 578887764  233344333333  33334999999999   99999999974

>KOG1164|consensus

Probab=99.40  E-value=2e-12  Score=100.47  Aligned_cols=125  Identities=21%  Similarity=0.247  Sum_probs=94.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCC-eEEEEEEeecChh-hHHHHHHHHHHHHhcc---CCCCcceeceeEE-eccCCc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGN-KKVSIKVQKINPE-FIDDIKEEYRMLRDLS---QHSNIPDFFGAYM-KKHQTH  114 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~-~~~aik~i~~~~~-~~~~~~~e~~~~~~l~---~h~niv~~~~~~~-~~~~~~  114 (176)
                      .|++.+.||+|+||.||.+.+.. .+ ..+|+|....... ....+..|..++..+.   ..+++..+++... .    .
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~-~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~----~   93 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKS-EKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST----E   93 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecC-CCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCC----C
Confidence            79999999999999999999876 43 5788888766422 2226788888888874   2358888888873 5    6


Q ss_pred             ceEEEEEecCCCCChhhhcC--C-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK--P-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~--~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+-|+||+.+ |.+|.++..  + ........  ...+.+.+|+++|+.|.   ||||+||+|+.
T Consensus        94 ~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~---iHRDiKp~N~~  154 (322)
T KOG1164|consen   94 DFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGF---IHRDIKPENFV  154 (322)
T ss_pred             ceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCc---ccCCcCHHHee
Confidence            7889999977 689998874  2 23333332  22377788999999999   99999999985

>KOG0664|consensus

Probab=99.40  E-value=2e-14  Score=106.68  Aligned_cols=126  Identities=16%  Similarity=0.227  Sum_probs=99.4

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-h--hhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CCcceEE
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-P--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QTHSEIW  118 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~~~~~~  118 (176)
                      +..+.||-|+||.||.+.+.. .++.+++|.++-- .  ...+.+-+|+.++... +|.||++..+....++ +.-+++|
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPR-dgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPR-SGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             CCCCcccccceeEEEeccCCC-CccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHH
Confidence            344689999999999999987 7888998876542 2  2456788999999999 9999999999887655 4456789


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|.+. .+|..+|- +..+..+..  ...+++-+|+|+|..+|   +||||||+|..
T Consensus       134 V~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~I---LHRDIKPGNLL  188 (449)
T KOG0664|consen  134 VLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANI---LHRDIKPGNLL  188 (449)
T ss_pred             HHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcch---hhccCCCccEE
Confidence            9999886 67887775 444444333  23488889999999999   99999999964

>KOG1027|consensus

Probab=99.40  E-value=3.6e-13  Score=111.93  Aligned_cols=119  Identities=16%  Similarity=0.244  Sum_probs=91.0

Q ss_pred             EEeeEEeecCCee-EEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          43 ELGYVIGSGVCAD-VYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        43 ~~~~~lg~G~~g~-v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      .-.+.+|.|+-|. ||+|.+.   ++.||+|.+-..  ...-+.+|+..+..-..||||+++++.-.+    .++.||..
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~ye---~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d----~qF~YIal  582 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVYE---GREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQD----RQFLYIAL  582 (903)
T ss_pred             ccHHHcccCCCCcEEEEEeeC---CceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccC----CceEEEEe
Confidence            3347788888766 7899994   578999976543  334568899999987799999999998877    89999999


Q ss_pred             ecCCCCChhhhcCCCCCC--hhh-----HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         122 QREAEMPPPRALKPDELD--LDN-----LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       122 e~~~~g~L~~~l~~~~~~--~~~-----~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |.|. .+|.|++.....+  ...     ....+...++++||.++|   |||||||+||.
T Consensus       583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i---VHRDLkPQNIL  638 (903)
T KOG1027|consen  583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI---VHRDLKPQNIL  638 (903)
T ss_pred             hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc---ccccCCCceEE
Confidence            9996 8999999632111  111     112255567999999888   99999999985

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=3.1e-12  Score=92.79  Aligned_cols=114  Identities=16%  Similarity=0.030  Sum_probs=83.4

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-----hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-----FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-----~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+...|++|+||.|+.+..   .+..++.+.+...+.     ....+.+|+.+++.+.++++++.+++.        +..
T Consensus         5 ~~~~~l~~~~f~~v~~~~~---~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--------~~~   73 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG---GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--------DGR   73 (218)
T ss_pred             ccceeecCCCcceEEEeec---CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--------cCE
Confidence            3567899999999997765   456777666554332     122478999999999556788888764        226


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccC-CCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEAL-DTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~-~~~nv~  174 (176)
                      +++|||+.|.+|...+...  ..  ....+...+|+++|+.|+   +|+|| ||+||.
T Consensus        74 ~lvmeyI~G~~L~~~~~~~--~~--~~~~qi~~~L~~lH~~GI---vHrDL~kp~NIL  124 (218)
T PRK12274         74 HLDRSYLAGAAMYQRPPRG--DL--AYFRAARRLLQQLHRCGV---AHNDLAKEANWL  124 (218)
T ss_pred             EEEEeeecCccHHhhhhhh--hH--HHHHHHHHHHHHHHHCcC---ccCCCCCcceEE
Confidence            9999999999987654221  11  224466778999999999   99999 799974

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.39  E-value=2e-12  Score=93.49  Aligned_cols=112  Identities=17%  Similarity=0.069  Sum_probs=82.7

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ||+|+||.||++.+   .+..+++|......         .....+.+|+.++..+ .++++......+..    ....+
T Consensus         2 ig~G~~~~vy~~~~---~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~----~~~~~   73 (199)
T TIGR03724         2 IAKGAEAIIYLGDF---LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVD----PDNKT   73 (199)
T ss_pred             CCCCceEEEEEeec---CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEE----CCCCE
Confidence            79999999999986   45678888754321         1134567899999998 77765544444444    45678


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||++|++|.+++.....    ....+...+|.++|..|+   +|+|++|+|+.
T Consensus        74 lv~e~~~g~~l~~~~~~~~~----~~~~~i~~~l~~lH~~gi---~H~Dl~~~Nil  122 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGND----ELLREIGRLVGKLHKAGI---VHGDLTTSNII  122 (199)
T ss_pred             EEEEEECCccHHHHHhhcHH----HHHHHHHHHHHHHHHCCe---ecCCCCcceEE
Confidence            99999999999988742211    224466778999999998   99999999984

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1006|consensus

Probab=99.35  E-value=1.6e-13  Score=101.31  Aligned_cols=130  Identities=18%  Similarity=0.229  Sum_probs=94.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +...+.++-+..||.|+||.|++..++. .+...|+|.|+...  +....+..|..+...-...||||+++|+.-.    
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~-sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~----  134 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKP-SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS----  134 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCc-cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc----
Confidence            4455567777899999999999999988 89999999998753  4566788888765554588999999999877    


Q ss_pred             cceEEEEEecCCCCChhhhcC------CCCCChhhHhhh--hhHHHHHHHH-hcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK------PDELDLDNLQDC--GDRYELGYVI-GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~--~~~~~l~~lh-~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+|+.||+|+ -+|..+.+      ....++..+...  -..-+|.||- ...|   ||||+||+||.
T Consensus       135 EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lki---IHRDvKPSNIL  200 (361)
T KOG1006|consen  135 EGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKI---IHRDVKPSNIL  200 (361)
T ss_pred             CCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhh---hhccCChhheE
Confidence            788999999997 56655543      222222111111  1123466665 3345   99999999984

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.35  E-value=8.7e-12  Score=91.53  Aligned_cols=114  Identities=25%  Similarity=0.309  Sum_probs=92.8

Q ss_pred             CCeeEEEEEecCCCCeEEEEEEeecChh-h-HHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCCh
Q psy9091          52 VCADVYEALDTQNGNKKVSIKVQKINPE-F-IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPP  129 (176)
Q Consensus        52 ~~g~v~~~~~~~~~~~~~aik~i~~~~~-~-~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L  129 (176)
                      +||.||.+.+.. .+..+++|.+..... . ...+..|+..+..+ +|+|++++++.+..    ....++++||+++++|
T Consensus         1 ~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~----~~~~~l~~e~~~~~~L   74 (244)
T smart00220        1 SFGKVYLARDKK-TGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFED----EDKLYLVMEYCDGGDL   74 (244)
T ss_pred             CceEEEEEEECC-CCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheee----CCEEEEEEeCCCCCCH
Confidence            588999999977 788999999876532 2 57889999999999 99999999999988    7889999999999999


Q ss_pred             hhhcCCCC-CChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         130 PRALKPDE-LDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       130 ~~~l~~~~-~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++.... .+.....  ..+...++.++|..++   +|.|++|+||-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~~i~~~ni~  119 (244)
T smart00220       75 FDLLKKRGRLSEDEARFYARQILSALEYLHSNGI---IHRDLKPENIL  119 (244)
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCe---ecCCcCHHHeE
Confidence            99986322 3332222  2256678999999988   99999999974

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0670|consensus

Probab=99.34  E-value=3e-12  Score=102.22  Aligned_cols=126  Identities=20%  Similarity=0.284  Sum_probs=101.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-----CCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-----SNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-----~niv~~~~~~~~~~~~~  114 (176)
                      .+|.+....|+|-|+.|..|.+.. .+..||||+|+-..-..++-+.|+.+|+.|...     -+.+.++..|..    .
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~-r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h----k  506 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQA-RGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH----K  506 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccC-CCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh----c
Confidence            366777888999999999999988 788999999998876677789999999998422     377888888888    7


Q ss_pred             ceEEEEEecCCCCChhhhcC----CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK----PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+|-+. .+|.+.|+    .-.+.+.+++.+  |..++|..|-.+|+   +|.||||+|+.
T Consensus       507 nHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v---lHaDIKPDNiL  568 (752)
T KOG0670|consen  507 NHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV---LHADIKPDNIL  568 (752)
T ss_pred             ceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe---eecccCccceE
Confidence            99999999774 78888886    223444444333  66778999997777   99999999985

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.32  E-value=1.8e-11  Score=88.60  Aligned_cols=117  Identities=21%  Similarity=0.181  Sum_probs=82.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-----------------------hHHHHHHHHHHHHhccCC
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-----------------------FIDDIKEEYRMLRDLSQH   97 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-----------------------~~~~~~~e~~~~~~l~~h   97 (176)
                      .|.+.+.||+|+||.||++...  .+..+++|.++....                       .......|..++..+ .+
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   92 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP--DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YE   92 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC--CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HH
Confidence            4778899999999999999874  478999998764210                       011356778888887 66


Q ss_pred             CC--cceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091          98 SN--IPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus        98 ~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++  ++..+    .    ....+++|||++|++|......   ........+...++.++|..|+   +|+|++|+||.
T Consensus        93 ~~i~v~~~~----~----~~~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~gi---~H~Dl~p~Nil  157 (198)
T cd05144          93 EGFPVPKPI----D----WNRHAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKHGI---IHGDLSEFNIL  157 (198)
T ss_pred             cCCCCCcee----e----cCCceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHCCC---CcCCCCcccEE
Confidence            64  33322    2    2446899999999998766431   1111223466667999999888   99999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0984|consensus

Probab=99.28  E-value=3.9e-12  Score=91.06  Aligned_cols=135  Identities=11%  Similarity=0.142  Sum_probs=101.1

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ...+..+.+.+..+..||+|++|.|-+-.+.. +|...|+|.++..  ........+|+.+..+....|.++.++|.+-.
T Consensus        38 ~~~~eV~ad~L~~i~elGrGayG~vekmrh~~-sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r  116 (282)
T KOG0984|consen   38 DRNFEVPADDLVGIEELGRGAYGVVEKMRHIQ-SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR  116 (282)
T ss_pred             cCccccchhhhhhhhhhcCCccchhhheeecc-CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence            44455566677778999999999999888888 8899999998864  34556678888876665589999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC----C-CCCChh--hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK----P-DELDLD--NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~----~-~~~~~~--~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          ...+|+.||.|+ -||..|.+    . ...++.  -...+++.-+|.++|++  ..+||||+||+||.
T Consensus       117 ----egdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiL  181 (282)
T KOG0984|consen  117 ----EGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNIL  181 (282)
T ss_pred             ----cccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEE
Confidence                788999999997 56766654    1 112221  12334566679999954  33599999999985

>KOG0983|consensus

Probab=99.20  E-value=6.6e-12  Score=93.32  Aligned_cols=125  Identities=14%  Similarity=0.137  Sum_probs=91.7

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .++.+..||.|+.|.||++..+. ++...|+|.++..  ++..+.+.+.+.++...-+.|.||+.+|+|..    +..++
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs-~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~----n~dV~  167 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRS-TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT----NTDVF  167 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcc-cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee----CchHH
Confidence            35556789999999999999998 8899999999875  45677889999887775368999999999999    78899


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhHhhh----hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNLQDC----GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~~~~----~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.||.|.  .+.+.|. .-....++....    ....+|.||-.+  .+++|||+||+||.
T Consensus       168 IcMelMs--~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNIL  224 (391)
T KOG0983|consen  168 ICMELMS--TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNIL  224 (391)
T ss_pred             HHHHHHH--HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceE
Confidence            9999875  3333332 212222222222    334457777633  23599999999984

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.18  E-value=1.7e-10  Score=78.85  Aligned_cols=119  Identities=11%  Similarity=0.033  Sum_probs=86.2

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-CCcceeceeEEeccCCcceEEEEEe
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-SNIPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-~niv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      +++.+|.|.++.||++...   +..+++|....... ...+..|+..+..+..+ .++++++..+..    .+..+++||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~---~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~----~~~~~~v~e   73 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK---DEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGES----DGWSYLLME   73 (155)
T ss_pred             cceecccccccceEEEEec---CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC----CCccEEEEE
Confidence            3568999999999999973   36789998766433 45688899999988333 578888777765    567999999


Q ss_pred             cCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         123 REAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       123 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |++++.+..+    ...............++.+|.....+.+|+|++|+||.
T Consensus        74 ~~~g~~~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil  121 (155)
T cd05120          74 WIEGETLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL  121 (155)
T ss_pred             ecCCeecccC----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEE
Confidence            9998777543    00111111224555699999876566799999999974

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.17  E-value=5.8e-10  Score=83.18  Aligned_cols=120  Identities=14%  Similarity=0.081  Sum_probs=82.7

Q ss_pred             eEEe-ecCCeeEEEEEecCCCCeEEEEEEeecCh--------------hhHHHHHHHHHHHHhccCCCCc--ceeceeEE
Q psy9091          46 YVIG-SGVCADVYEALDTQNGNKKVSIKVQKINP--------------EFIDDIKEEYRMLRDLSQHSNI--PDFFGAYM  108 (176)
Q Consensus        46 ~~lg-~G~~g~v~~~~~~~~~~~~~aik~i~~~~--------------~~~~~~~~e~~~~~~l~~h~ni--v~~~~~~~  108 (176)
                      ..+| .|+.|.+|.+..   .+..+++|......              .....+.+|+.++..+ .|+++  +..++...
T Consensus        37 ~~lg~~~g~gtv~~v~~---~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~  112 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT---PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARV  112 (239)
T ss_pred             ceeecCCCCccEEEEEe---CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeee
Confidence            4676 788888888877   35678888775311              1234578899999998 77764  55555543


Q ss_pred             eccCCcceEEEEEecCCC-CChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAE-MPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .........++|||+++| .+|.+++.....+.  ....+...++.++|..|+   +|+|++|+||.
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~--~~~~~i~~~l~~lH~~GI---~HrDlkp~NIL  174 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQEAPLSE--EQWQAIGQLIARFHDAGV---YHADLNAHNIL  174 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhcCCCCH--HHHHHHHHHHHHHHHCCC---CCCCCCchhEE
Confidence            311101223599999997 68888886433333  224467778999999999   99999999984

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.12  E-value=3.9e-10  Score=80.65  Aligned_cols=116  Identities=24%  Similarity=0.231  Sum_probs=71.9

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---hHHH----------------------HHHHHHHHHhccCCCC
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDD----------------------IKEEYRMLRDLSQHSN   99 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---~~~~----------------------~~~e~~~~~~l~~h~n   99 (176)
                      .+.||+|+||.||.+.+.  .+..+++|.++....   ....                      ...|...+..+ .+.+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~--~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~   78 (187)
T cd05119           2 GGPIGTGKEADVYLALDG--DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL-YEAG   78 (187)
T ss_pred             CcccccccceeEEEEECC--CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH-HHcC
Confidence            467999999999999875  478899998875321   1111                      13455555554 3322


Q ss_pred             --cceeceeEEeccCCcceEEEEEecCCCCChhhh-cCCCCC-ChhhHhhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         100 --IPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRA-LKPDEL-DLDNLQDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       100 --iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~-~~~~~~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                        +...+   ..     ...+++|||++++.+... +..... +.......+...++.++|. .++   +|+|++|+||-
T Consensus        79 ~~~~~~~---~~-----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~i---vH~Dl~p~Nil  147 (187)
T cd05119          79 VPVPKPI---DL-----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGL---VHGDLSEYNIL  147 (187)
T ss_pred             CCCCceE---ec-----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCc---CcCCCChhhEE
Confidence              22222   22     235899999998654321 211111 2222233366778999998 888   99999999983

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166|consensus

Probab=99.07  E-value=3e-10  Score=97.69  Aligned_cols=126  Identities=16%  Similarity=0.160  Sum_probs=87.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccC---CCCcceeceeEEeccCC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ---HSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~---h~niv~~~~~~~~~~~~  113 (176)
                      --...|.+.+.+|+|+||.||+|....  +..+|+|.-.+...  .+|..-..++.+| +   -+.+..+..++..    
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~--~~~~alK~e~P~~~--WEfYI~~q~~~RL-k~~~~~~~~~~~~a~~~----  765 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN--GKLVALKVEKPPNP--WEFYICLQVMERL-KPQMLPSIMHISSAHVF----  765 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC--CcEEEEEeecCCCc--eeeeehHHHHHhh-chhhhcchHHHHHHHcc----
Confidence            344578888999999999999999864  78999998765321  1222222334444 2   1345556666666    


Q ss_pred             cceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.-+||+||.+.|+|.+++.. .-.+....  ..++.+.-++.||..+|   ||-||||||..
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~I---IHgDiKPDNfl  826 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGI---IHGDIKPDNFL  826 (974)
T ss_pred             CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcce---ecccCCcceeE
Confidence            5667899999999999999972 22222222  22255556999999999   99999999963

>KOG0665|consensus

Probab=99.06  E-value=4.3e-11  Score=90.45  Aligned_cols=128  Identities=20%  Similarity=0.241  Sum_probs=93.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      ..+|.-+..+|.|+= .|-.+.+.- .+.++++|-....   ....+...+|..++..+ .|+|+++++..|....  ..
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v-~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~   92 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQV-LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEE   92 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhh-ccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHH
Confidence            346888889988877 666677665 6788888865432   23455678999999999 9999999999986411  12


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....|+|||++. ++|...+. -.++-..  ....+.+-+++++|+.||   +||||||+|+.
T Consensus        93 ~~e~y~v~e~m~-~nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~~I---ihRdLkPsniv  150 (369)
T KOG0665|consen   93 FQEVYLVMELMD-ANLCQVIL-MELDHETISYILYQMLCGIKHLHSAGI---IHRDLKPSNIV  150 (369)
T ss_pred             HHhHHHHHHhhh-hHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhcce---eecccCcccce
Confidence            355899999997 68887775 1122111  122366778999999999   99999999984

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.04  E-value=4.7e-09  Score=79.43  Aligned_cols=121  Identities=21%  Similarity=0.312  Sum_probs=94.8

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCC-CcceeceeEEeccCCcce
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHS-NIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~-niv~~~~~~~~~~~~~~~  116 (176)
                      |.+...+|.|+|+.||.+.+.    ..+++|.+....    .....+.+|..++..+ .|+ +++.+.+.+..    ...
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~----~~~   72 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQD----EGS   72 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEec----CCE
Confidence            778899999999999999884    467888877642    1466789999999998 666 79999999966    566


Q ss_pred             EEEEEecCCCCChhhhcCCC----CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD----ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++++++.++++.+++...    .......  ...+..-+++++|..++   +|||+||+|+.
T Consensus        73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~---~hrd~kp~nil  133 (384)
T COG0515          73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGI---IHRDIKPENIL  133 (384)
T ss_pred             EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHee
Confidence            89999999999999777632    2333222  22255566889999997   99999999985

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.99  E-value=1.7e-10  Score=94.64  Aligned_cols=129  Identities=21%  Similarity=0.225  Sum_probs=75.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----------------------------------hhHH
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----------------------------------EFID   82 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----------------------------------~~~~   82 (176)
                      ....|.. +.+|+|++|+||.+.... +|+.||+|++++.-                                   +...
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~-~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~  195 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKD-NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK  195 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECC-CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence            3445665 789999999999999876 68999999997641                                   0011


Q ss_pred             HH------HHHHHHHHhcc---CCCCcceeceeEEeccCCcceEEEEEecCCCCChhhh--cCCCCCChhhHhhhhhHHH
Q psy9091          83 DI------KEEYRMLRDLS---QHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRA--LKPDELDLDNLQDCGDRYE  151 (176)
Q Consensus        83 ~~------~~e~~~~~~l~---~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--l~~~~~~~~~~~~~~~~~~  151 (176)
                      .+      .+|+.-+..+.   .+.+.+.+...+.+-   ...-+|+|||++|+++.++  +.....+...........-
T Consensus       196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~  272 (537)
T PRK04750        196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVF  272 (537)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence            12      22332222221   122222222222110   2335799999999999875  2222333322222233333


Q ss_pred             HHHHHhcCCCccccccCCCCCcc
Q psy9091         152 LGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       152 l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.-++..|+   +|+|+||+|+.
T Consensus       273 ~~Qif~~Gf---fHaDpHPGNIl  292 (537)
T PRK04750        273 FTQVFRDGF---FHADMHPGNIF  292 (537)
T ss_pred             HHHHHhCCe---eeCCCChHHeE
Confidence            556677777   99999999984

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.89  E-value=1.6e-08  Score=81.62  Aligned_cols=121  Identities=21%  Similarity=0.179  Sum_probs=72.6

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-----hHH------------------------------------HH
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-----FID------------------------------------DI   84 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-----~~~------------------------------------~~   84 (176)
                      +.||.|++|+||+|....  |..||||+.++.-.     +..                                    .+
T Consensus       123 ~plasaSigQVh~A~l~~--G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD--GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             cceeeeehhheEEEEecC--CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            579999999999998754  78999999876410     000                                    12


Q ss_pred             HHHHHHHHhcc---CCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCC--CCCChhhHhhhhhHHHHHHHHhcC
Q psy9091          85 KEEYRMLRDLS---QHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQDCGDRYELGYVIGSG  159 (176)
Q Consensus        85 ~~e~~~~~~l~---~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~l~~lh~~~  159 (176)
                      .+|...+..+.   .+.+-+.+...+..-   ....+|+|||++|++|.++...  ...+............+..+|..|
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDR---TSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhh---cCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC
Confidence            33333333321   222222333333210   2346899999999999887641  112221111111223477889888


Q ss_pred             CCccccccCCCCCcc
Q psy9091         160 VCADVYEALDTQNVT  174 (176)
Q Consensus       160 i~~~v~~~~~~~nv~  174 (176)
                      +   +|+|+||+||-
T Consensus       278 ~---~H~D~hPgNil  289 (437)
T TIGR01982       278 F---FHADLHPGNIF  289 (437)
T ss_pred             c---eeCCCCcccEE
Confidence            8   99999999984

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1024|consensus

Probab=98.84  E-value=1.8e-09  Score=84.02  Aligned_cols=128  Identities=13%  Similarity=0.160  Sum_probs=92.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCC-----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGN-----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ...++++...+.+|+||.||.|.|+. ..     +.+-+|.+...  +-....+..|...+..+ .|+|+.+..+.+...
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~e-Edt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~  359 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWRE-EDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIED  359 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecc-cCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeec
Confidence            34467777889999999999997754 22     12334433322  12344577888888888 899999999888663


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-CCCC---------ChhhHh-hhhhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-PDEL---------DLDNLQ-DCGDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~~~~---------~~~~~~-~~~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                         ....++++.++..|+|..||+ ....         ..+... ..|..++++++|+.++   ||.||+.+|-
T Consensus       360 ---~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~V---iHkDiAaRNC  427 (563)
T KOG1024|consen  360 ---YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV---IHKDIAARNC  427 (563)
T ss_pred             ---cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCc---ccchhhhhcc
Confidence               567899999999999999997 1111         111112 2277788999999999   9999999984

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.77  E-value=7.1e-08  Score=67.68  Aligned_cols=115  Identities=12%  Similarity=-0.027  Sum_probs=76.9

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCC-cceeceeEEeccCCcceEEEEEec
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN-IPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n-iv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      .+.++.|.++.+|.+..   .+..+++|..............|+.++..+ .+.+ ++.++...      ...-++||||
T Consensus         3 ~~~l~~G~~~~vy~~~~---~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~P~~~~~~------~~~~~lv~e~   72 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV---ANKKYVVRIPGNGTELLINRENEAENSKLA-AEAGIGPKLYYFD------PETGVLITEF   72 (170)
T ss_pred             eeecCCcccCceEEEEE---CCeEEEEEeCCCCcccccCHHHHHHHHHHH-HHhCCCCceEEEe------CCCCeEEEEe
Confidence            35778999999999986   457899998765432223457788888887 4333 34444433      2234799999


Q ss_pred             CCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC--CccccccCCCCCcc
Q psy9091         124 EAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV--CADVYEALDTQNVT  174 (176)
Q Consensus       124 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i--~~~v~~~~~~~nv~  174 (176)
                      ++|.++.+.   ....  .....+....|+.+|..++  ...+|.|++|+||.
T Consensus        73 i~G~~l~~~---~~~~--~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil  120 (170)
T cd05151          73 IEGSELLTE---DFSD--PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFL  120 (170)
T ss_pred             cCCCccccc---cccC--HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEE
Confidence            999887543   0111  1123355667999998873  34599999999985

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0590|consensus

Probab=98.31  E-value=3.1e-07  Score=76.85  Aligned_cols=122  Identities=18%  Similarity=0.119  Sum_probs=82.9

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEee----cC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK----IN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~----~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .....+|.|++|.++.+.... ....+..|..+    ..   ..+...+..|+.+-..+ .|+|++.....+..    ..
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~-~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~----~~  394 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRS-DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQE----ID  394 (601)
T ss_pred             CccceeeecccCceEEEEecC-CCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhh----cc
Confidence            355789999999777776654 33334333322    21   12333367777788888 99998877777665    34


Q ss_pred             eEEEEEecCCCCChhhhcCCC-CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD-ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...-.||||++ +|+.++... .......  .+.+..-+++|+|..|+   .|||+|++|..
T Consensus       395 ~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi---ahrdlK~enll  452 (601)
T KOG0590|consen  395 GILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL---AHRDLKLENLL  452 (601)
T ss_pred             cchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc---eeccCccccEE
Confidence            44445999999 999998743 2222221  22366678999999999   99999999974

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.13  E-value=2.5e-05  Score=56.84  Aligned_cols=84  Identities=18%  Similarity=0.267  Sum_probs=58.1

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--hHHHHHHHHHHHHhccCC--CCcceeceeEEeccCCcceEEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      +.++.|..+.+|++...  .+..+++|.......  ....+..|..++..+ .+  .++.+++...... ...+..+++|
T Consensus         4 ~~l~~G~~n~~~~v~~~--~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~vp~~~~~~~~~-~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG--GGRRLVLRRPPPGALLPSAHDVAREYRVLRAL-AGTGVPVPKVLALCEDP-SVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEec--CCcceEEEeCCCcccCcccccHHHHHHHHHHh-hCCCCCCCCEEEECCCC-CccCCceEEE
Confidence            57889999999999873  347899998765422  345678899999988 44  3355555554331 0012568999


Q ss_pred             ecCCCCChhhhc
Q psy9091         122 QREAEMPPPRAL  133 (176)
Q Consensus       122 e~~~~g~L~~~l  133 (176)
                      ||++|.++.+.+
T Consensus        80 e~i~G~~l~~~~   91 (223)
T cd05154          80 ERVDGRVLRDRL   91 (223)
T ss_pred             EEeCCEecCCCC
Confidence            999998887654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603|consensus

Probab=98.11  E-value=3.2e-07  Score=75.13  Aligned_cols=120  Identities=14%  Similarity=0.135  Sum_probs=87.2

Q ss_pred             EeecCCeeEEEEEecC--CCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEe
Q psy9091          48 IGSGVCADVYEALDTQ--NGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~--~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      +|+|+||.|+.+....  +.+..+++|.+....   ........|..++.....||.++.++..+..    ...++++++
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt----~~kl~l~ld   77 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT----DGKLYLILD   77 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc----ccchhHhhh
Confidence            6899999998664321  034567777765421   1222456677778887569999999999988    788999999


Q ss_pred             cCCCCChhhhcC-CCCCChhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         123 REAEMPPPRALK-PDELDLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       123 ~~~~g~L~~~l~-~~~~~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |..||.++..+. ....+...  ....+..++++.+|..++   +|||+|++||-
T Consensus        78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~i---iyrd~k~enil  129 (612)
T KOG0603|consen   78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGI---AYRDYKLENVL  129 (612)
T ss_pred             hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHH---HHhccccccee
Confidence            999999988876 22222222  223366778999999999   99999999984

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.09  E-value=1.1e-06  Score=76.17  Aligned_cols=56  Identities=11%  Similarity=-0.008  Sum_probs=42.0

Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++++||+ +++|.++|..  ...+....  .+.+++.+|.|+|.+||   |||||||+||.
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gI---vHrDlKP~NiL  112 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGI---VVHNVRPSCFV  112 (793)
T ss_pred             chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCe---eeccCCchhEE
Confidence            4577888887 5799999962  22333222  23378889999999998   99999999985

>KOG0590|consensus

Probab=97.96  E-value=1.9e-06  Score=72.18  Aligned_cols=130  Identities=18%  Similarity=0.192  Sum_probs=95.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +...|.+.+.||+|+|+.+-......+....++.+.+....   .....+..|..+-..+.+|.|++.+++....    .
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~----~   93 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS----P   93 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC----C
Confidence            34568888889999999988776643133456666554432   2344556677777777559999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhc-CCC----CCChhhHhhhhhHHHHHHHH-hcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRAL-KPD----ELDLDNLQDCGDRYELGYVI-GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l-~~~----~~~~~~~~~~~~~~~l~~lh-~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++++|..||++++.+ ..+    ..........+..-++.|+| ..++   .|+|++|+|..
T Consensus        94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~---~h~~ikP~n~~  156 (601)
T KOG0590|consen   94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV---THRDIKPSNSL  156 (601)
T ss_pred             cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc---ccCCCCCccch
Confidence            8899999999999999999 422    22232334556667899999 8888   99999999853

>KOG0601|consensus

Probab=97.87  E-value=9.3e-06  Score=66.27  Aligned_cols=131  Identities=11%  Similarity=-0.060  Sum_probs=92.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ....|..+..||.|.|+.++.+..+...+..+++|.+...   ...-..-..|+.+...+..|.+++++...|..    .
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~----~  338 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ----L  338 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc----c
Confidence            3456888999999999999988866315678888876542   11111124455566666678888888777777    5


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCccc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVTS  175 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~~  175 (176)
                      ...|+-.||+.++++...+. ....+....  ...+...++-++|....   +|.|++|+||-+
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~---~~~d~~psni~i  399 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF---VHLDVKPSNILI  399 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhh---hcccccccceee
Confidence            66789999999999877664 222232222  23377888999998888   999999999853

>KOG0195|consensus

Probab=97.83  E-value=2.2e-06  Score=64.42  Aligned_cols=111  Identities=14%  Similarity=0.161  Sum_probs=79.6

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+.++.+|.+...|..|+|.|..   ..++.|++...   ......|..|..-++.+ .||||+.+++.+..    ...+
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqg---ndivakil~vr~~t~risrdfneefp~lrif-shpnilpvlgacns----ppnl  262 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQG---NDIVAKILNVREVTARISRDFNEEFPALRIF-SHPNILPVLGACNS----PPNL  262 (448)
T ss_pred             hhhhhhhhccCCCcccccccccC---cchhhhhhhhhhcchhhcchhhhhCcceeee-cCCchhhhhhhccC----CCCc
Confidence            35566888899999999999965   33455655442   23345577787788888 99999999999987    6889


Q ss_pred             EEEEecCCCCChhhhcCC-CCC--C-hhhHhhh-hhHHHHHHHHhcC
Q psy9091         118 WFVMQREAEMPPPRALKP-DEL--D-LDNLQDC-GDRYELGYVIGSG  159 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-~~~--~-~~~~~~~-~~~~~l~~lh~~~  159 (176)
                      .++..|++.|+|+..|.. +..  + .+..++. ...-+++|+|...
T Consensus       263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc
Confidence            999999999999999862 211  2 1222222 4445689999754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.82  E-value=0.00018  Score=51.38  Aligned_cols=113  Identities=19%  Similarity=0.138  Sum_probs=77.3

Q ss_pred             EEeecCCeeEEEEEecCCCCeEEEEEEee-cC---h----h-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          47 VIGSGVCADVYEALDTQNGNKKVSIKVQK-IN---P----E-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        47 ~lg~G~~g~v~~~~~~~~~~~~~aik~i~-~~---~----~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+++|+=+.++.+.+.   +.++.+|.=. +.   +    + ......+|..++..+ .--.|....-.+.+    ...-
T Consensus         3 ~i~~GAEa~i~~~~~~---g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a-~~~GV~~P~v~dvD----~~~~   74 (204)
T COG3642           3 LIKQGAEAIIYLTDFL---GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKA-REAGVPVPIVYDVD----PDNG   74 (204)
T ss_pred             hhhCCcceeEEeeecc---CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEEEEc----CCCC
Confidence            4678888889988773   3456666422 21   1    1 234568899999887 54455554445555    5667


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .|+|||++|-.|.++|.....+.    ...+---+.-+|..|+   ||=|+-++|+.
T Consensus        75 ~I~me~I~G~~lkd~l~~~~~~~----~r~vG~~vg~lH~~gi---vHGDLTtsNiI  124 (204)
T COG3642          75 LIVMEYIEGELLKDALEEARPDL----LREVGRLVGKLHKAGI---VHGDLTTSNII  124 (204)
T ss_pred             EEEEEEeCChhHHHHHHhcchHH----HHHHHHHHHHHHhcCe---ecCCCccceEE
Confidence            89999999988888886442121    3344455999999999   99999999974

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.80  E-value=0.00043  Score=50.12  Aligned_cols=118  Identities=18%  Similarity=0.098  Sum_probs=70.0

Q ss_pred             eEEeecCCeeEEEEEecCC-----CCeEEEEEEeecC-------hh--------------------hHHHHHHHHHHHHh
Q psy9091          46 YVIGSGVCADVYEALDTQN-----GNKKVSIKVQKIN-------PE--------------------FIDDIKEEYRMLRD   93 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~-----~~~~~aik~i~~~-------~~--------------------~~~~~~~e~~~~~~   93 (176)
                      ..||.|.=+.||.|....+     .+..+|+|+.+..       ..                    ...+...|...|..
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3578888888998875420     1357888876531       00                    01123478888888


Q ss_pred             ccCC-CCcceeceeEEeccCCcceEEEEEecCCCCChhh-hcCCCCCChhh--HhhhhhHHHHHHH-HhcCCCccccccC
Q psy9091          94 LSQH-SNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPR-ALKPDELDLDN--LQDCGDRYELGYV-IGSGVCADVYEAL  168 (176)
Q Consensus        94 l~~h-~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~--~~~~~~~~~l~~l-h~~~i~~~v~~~~  168 (176)
                      +... -+++.++..        ..-+|+|||++++.+.. .++....+...  ....+....|..+ |..|+   ||.|+
T Consensus        83 l~~~Gv~vP~pi~~--------~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~gl---VHGDL  151 (197)
T cd05146          83 MQKAGIPCPEVVVL--------KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNL---VHADL  151 (197)
T ss_pred             HHHcCCCCCeEEEe--------cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCe---ecCCC
Confidence            7322 355555543        33588999998754422 23221222111  1123555567777 78888   99999


Q ss_pred             CCCCcc
Q psy9091         169 DTQNVT  174 (176)
Q Consensus       169 ~~~nv~  174 (176)
                      .+.||.
T Consensus       152 s~~NIL  157 (197)
T cd05146         152 SEYNML  157 (197)
T ss_pred             CHHHEE
Confidence            999974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.78  E-value=0.00035  Score=53.45  Aligned_cols=130  Identities=15%  Similarity=0.122  Sum_probs=73.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccC---------CCCcceecee
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQ---------HSNIPDFFGA  106 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~---------h~niv~~~~~  106 (176)
                      ..+.....||.|.|+.||.+.+.. +++.+++|......    ...+.+.+|.-....+.+         |-.++-.++.
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~-t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~   90 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVE-TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL   90 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred             eEEEEccccccCCceEEEEEEEcc-CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence            356777999999999999999998 99999999875431    233445554433322211         1122222222


Q ss_pred             EEecc--------CCcc-----eEEEEEecCCCCChhhhcC----CCCCChhhH---hhh---hhHHHHHHHHhcCCCcc
Q psy9091         107 YMKKH--------QTHS-----EIWFVMQREAEMPPPRALK----PDELDLDNL---QDC---GDRYELGYVIGSGVCAD  163 (176)
Q Consensus       107 ~~~~~--------~~~~-----~~~lv~e~~~~g~L~~~l~----~~~~~~~~~---~~~---~~~~~l~~lh~~~i~~~  163 (176)
                      ..-..        .+..     ..+++|+-+. ++|.+++.    .........   +..   |....++++|+.|+   
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl---  166 (288)
T PF14531_consen   91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL---  166 (288)
T ss_dssp             EEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE---
T ss_pred             EEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce---
Confidence            22110        0011     3467888774 78888764    111111110   111   23345899999999   


Q ss_pred             ccccCCCCCcc
Q psy9091         164 VYEALDTQNVT  174 (176)
Q Consensus       164 v~~~~~~~nv~  174 (176)
                      ||.|++|+|+-
T Consensus       167 VHgdi~~~nfl  177 (288)
T PF14531_consen  167 VHGDIKPENFL  177 (288)
T ss_dssp             EEST-SGGGEE
T ss_pred             EecccceeeEE
Confidence            99999999973

>KOG1240|consensus

Probab=97.74  E-value=9.1e-06  Score=70.95  Aligned_cols=121  Identities=17%  Similarity=0.081  Sum_probs=87.2

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .|...+.||++.|=++.++.+..   +.+++|+.-...     ..-.+-..++. +... ++||++++.-...+    ..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e---G~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t----~k   94 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE---GLVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVT----DK   94 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC---ceEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHh----hH
Confidence            58889999999999999999854   458888875431     11222334444 4444 89999998766665    56


Q ss_pred             eEEEEEecCCCCChhhhcC--CCCCChhh-HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK--PDELDLDN-LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~-~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      -.|||-+|+. -+|.|.|.  +.+..... -...|.+.++.-+|..|+   +|=|||.+||.
T Consensus        95 AAylvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gV---cHGDIKsENIL  152 (1431)
T KOG1240|consen   95 AAYLVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGV---CHGDIKSENIL  152 (1431)
T ss_pred             HHHHHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCc---cccccccceEE
Confidence            6788888886 58999986  32222211 122388889999999999   99999999984

>KOG4158|consensus

Probab=97.72  E-value=4e-05  Score=60.59  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=54.7

Q ss_pred             CCCCcceeceeEEecc-----------------------CCcceEEEEEecCCCCChhhhcCCCCCC--hhhHhhhhhHH
Q psy9091          96 QHSNIPDFFGAYMKKH-----------------------QTHSEIWFVMQREAEMPPPRALKPDELD--LDNLQDCGDRY  150 (176)
Q Consensus        96 ~h~niv~~~~~~~~~~-----------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~  150 (176)
                      +||||+++.+.|.++.                       +....+|+||.-.+ -+|..++......  ......-|.+-
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE  352 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE  352 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence            7999999998887532                       12456899998776 5788888632222  22222236777


Q ss_pred             HHHHHHhcCCCccccccCCCCCcc
Q psy9091         151 ELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       151 ~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..++|.+|+   .|||||+|||.
T Consensus       353 av~hL~~hgv---AhRDlKSDNiL  373 (598)
T KOG4158|consen  353 AVTHLHKHGV---AHRDLKSDNIL  373 (598)
T ss_pred             HHHHHHHccc---hhhcccccceE
Confidence            8999999999   99999999985

>KOG3087|consensus

Probab=97.67  E-value=0.00071  Score=48.48  Aligned_cols=120  Identities=15%  Similarity=0.003  Sum_probs=80.4

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---------hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+..+.+|+-+.|+.+.+   .|+...+|.-...         .-.......|+..+.++ .--.|.-..-.+.+    .
T Consensus        11 ~l~likQGAEArv~~~~~---~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D----~   82 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF---SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFID----T   82 (229)
T ss_pred             cceeeeccceeeEeeecc---CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEe----c
Confidence            456778999999999988   4566777764321         11345578899988886 54555555555666    5


Q ss_pred             ceEEEEEecCCC-CChhhhcCC----CCCChhh-HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAE-MPPPRALKP----DELDLDN-LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~-g~L~~~l~~----~~~~~~~-~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.-+|.|||++| -++.+++..    ...+... .....+-..++-+|..++   ||=||-.+|+.
T Consensus        83 ~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi---iHGDLTTSNil  145 (229)
T KOG3087|consen   83 YGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI---IHGDLTTSNIL  145 (229)
T ss_pred             CCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe---ecccccccceE
Confidence            566889999986 367777762    1222211 112233445999999999   99999999974

>KOG0606|consensus

Probab=97.63  E-value=0.00021  Score=62.48  Aligned_cols=95  Identities=19%  Similarity=0.267  Sum_probs=60.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .....|..++.+..|+||-||.+.++. +..++|+|+ +....    +      +      .||.    .+      .+.
T Consensus        80 p~e~df~~IklisngAygavylvrh~~-trqrfa~ki-Nkq~l----i------l------Rnil----t~------a~n  131 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKE-TRQRFAMKI-NKQNL----I------L------RNIL----TF------AGN  131 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccc-cccchhhcc-cccch----h------h------hccc----cc------cCC
Confidence            334568999999999999999999876 667788743 32211    0      0      1111    11      122


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.|      |+....++ ...+..      +-.++++|+|+.||   +|||+||+|+.
T Consensus       132 pfvv------gDc~tllk~~g~lPv------dmvla~Eylh~ygi---vhrdlkpdnll  175 (1205)
T KOG0606|consen  132 PFVV------GDCATLLKNIGPLPV------DMVLAVEYLHSYGI---VHRDLKPDNLL  175 (1205)
T ss_pred             ccee------chhhhhcccCCCCcc------hhhHHhHhhccCCe---ecCCCCCCcce
Confidence            3333      55555553 222222      11468999999999   99999999974

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.61  E-value=0.0069  Score=44.05  Aligned_cols=120  Identities=16%  Similarity=0.159  Sum_probs=78.4

Q ss_pred             CCCeEEeeEEeecCC-eeEEEEEecCCCCeEEEEEEeecC------------h----------hhHHHHHHHHHHHHhcc
Q psy9091          39 GDRYELGYVIGSGVC-ADVYEALDTQNGNKKVSIKVQKIN------------P----------EFIDDIKEEYRMLRDLS   95 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~-g~v~~~~~~~~~~~~~aik~i~~~------------~----------~~~~~~~~e~~~~~~l~   95 (176)
                      ...++.++.||.|.- |.||++..   .+..+|+|.....            .          .+...|..|+....++.
T Consensus        36 ~~~I~flefLg~g~~~~~V~kv~I---~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk  112 (207)
T PF13095_consen   36 GDDIEFLEFLGHGSHDGYVFKVEI---DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK  112 (207)
T ss_pred             CCcEeeeeecCCCCceeEEEEEEE---CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence            367999999999999 99999998   4579999993210            0          12335778888777763


Q ss_pred             --CCCCc--ceeceeEEecc--------------CCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHh
Q psy9091          96 --QHSNI--PDFFGAYMKKH--------------QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIG  157 (176)
Q Consensus        96 --~h~ni--v~~~~~~~~~~--------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~  157 (176)
                        ++.++  ++.+|+..-..              .......||-||++...          .......++.+-.|..+|.
T Consensus       113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~~~~~~~dl~~~~k  182 (207)
T PF13095_consen  113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRDIPQMLRDLKILHK  182 (207)
T ss_pred             hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhHHHHHHHHHHHHHH
Confidence              33344  77777774320              11222456777666332          1222234455556888887


Q ss_pred             cCCCccccccCCCCCcc
Q psy9091         158 SGVCADVYEALDTQNVT  174 (176)
Q Consensus       158 ~~i~~~v~~~~~~~nv~  174 (176)
                      .||   +-+|++++|..
T Consensus       183 ~gI---~~~Dv~~~ny~  196 (207)
T PF13095_consen  183 LGI---VPRDVKPRNYR  196 (207)
T ss_pred             CCe---eeccCcccccc
Confidence            777   99999999953

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.40  E-value=0.0013  Score=54.45  Aligned_cols=119  Identities=15%  Similarity=0.093  Sum_probs=74.5

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----hh------------------------------HHH------H
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----EF------------------------------IDD------I   84 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----~~------------------------------~~~------~   84 (176)
                      +.++.++-|+||.|....  |+.||||++++.-     .+                              .+.      +
T Consensus       131 ~PiAsASIaQVH~A~L~s--G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy  208 (517)
T COG0661         131 EPIASASIAQVHRAVLKS--GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY  208 (517)
T ss_pred             CchhhhhHhhheeEEecC--CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence            688999999999999975  8899999988640     00                              000      1


Q ss_pred             HHHHHHHHhc----cCCCCcceeceeE-EeccCCcceEEEEEecCCCCChhhhcC--CCCCChhhHhhhhhHHHHHHHHh
Q psy9091          85 KEEYRMLRDL----SQHSNIPDFFGAY-MKKHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQDCGDRYELGYVIG  157 (176)
Q Consensus        85 ~~e~~~~~~l----~~h~niv~~~~~~-~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~~l~~lh~  157 (176)
                      .+|..-+..+    .+.+++. +...| ..    ...-.|+|||++|-.+.++..  ....+...........-+.-+..
T Consensus       209 ~~EA~n~~~~~~nf~~~~~v~-VP~V~we~----t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~  283 (517)
T COG0661         209 RREAANAERFRENFKDDPDVY-VPKVYWEY----TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHHcCCCCCeE-eceeehhc----cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence            2233322222    1223322 22222 12    244578999999999988843  44455333323344445777888


Q ss_pred             cCCCccccccCCCCCcc
Q psy9091         158 SGVCADVYEALDTQNVT  174 (176)
Q Consensus       158 ~~i~~~v~~~~~~~nv~  174 (176)
                      .|.   .|-|.||+|+.
T Consensus       284 dgf---fHaDpHpGNi~  297 (517)
T COG0661         284 DGF---FHADPHPGNIL  297 (517)
T ss_pred             cCc---cccCCCccceE
Confidence            888   99999999985

>KOG1243|consensus

Probab=97.27  E-value=0.00048  Score=57.58  Aligned_cols=103  Identities=17%  Similarity=0.170  Sum_probs=70.1

Q ss_pred             EEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCC
Q psy9091          59 ALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE  137 (176)
Q Consensus        59 ~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  137 (176)
                      |..+. .+.++.+........ ......+.+.-++.+ +||||++++..+..    ...+|||+|-+.  .|..++....
T Consensus        31 ~t~k~-~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~----~~~~ylvTErV~--Pl~~~lk~l~  102 (690)
T KOG1243|consen   31 GTRKA-DGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-RHPNILSYLDTTEE----EGTLYLVTERVR--PLETVLKELG  102 (690)
T ss_pred             cceec-cCCceEEEEEeCCCchhhHHHHHHHHHhhhc-cCchhhhhhhhhcc----cCceEEEeeccc--cHHHHHHHhH
Confidence            44444 566777776655432 334567788889999 99999999999988    789999999886  4555554222


Q ss_pred             CChhhHhhhhhHHHHHHHH-hcCCCccccccCCCCC
Q psy9091         138 LDLDNLQDCGDRYELGYVI-GSGVCADVYEALDTQN  172 (176)
Q Consensus       138 ~~~~~~~~~~~~~~l~~lh-~~~i~~~v~~~~~~~n  172 (176)
                      ...-.....+++.+|.+|| .+++   +|--+..+.
T Consensus       103 ~~~v~~Gl~qIl~AL~FL~~d~~l---vHgNv~~~S  135 (690)
T KOG1243|consen  103 KEEVCLGLFQILAALSFLNDDCNL---VHGNVCKDS  135 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCe---eeccEeeee
Confidence            2222233448888999997 5555   666555443

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.22  E-value=0.02  Score=42.30  Aligned_cols=124  Identities=12%  Similarity=-0.022  Sum_probs=68.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh----hH------HHHHHHHHHHHhcc--CCCCcceeceeE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FI------DDIKEEYRMLRDLS--QHSNIPDFFGAY  107 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~----~~------~~~~~e~~~~~~l~--~h~niv~~~~~~  107 (176)
                      ..|...+.+-......|.+...   .+..+.+|..+....    ..      ....+.+.-...+.  +-.....++.+.
T Consensus        31 ~~~~~~kv~k~~~r~~ValIei---~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIEI---DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             CCceEEEeecCCCccEEEEEEE---CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            3567777776666666666555   457788887654311    11      11222333222220  112222222222


Q ss_pred             Eecc-CCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKH-QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+. .-....+++|||++|-.|.+...     ......-.....+.-+|..|.   .|-|.+|+|+.
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e~~~~ki~~~ikqlH~~G~---~HGD~hpgNFl  167 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED-----IDEDLAEKIVEAIKQLHKHGF---YHGDPHPGNFL  167 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh-----cCHHHHHHHHHHHHHHHHcCC---ccCCCCcCcEE
Confidence            2211 11355678999999988866532     111111234556999999999   99999999973

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.22  E-value=0.0047  Score=44.83  Aligned_cols=117  Identities=21%  Similarity=0.258  Sum_probs=76.2

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----------------hhHHHHHHHHHHHHhc-----cCCCCcce
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----------------EFIDDIKEEYRMLRDL-----SQHSNIPD  102 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----------------~~~~~~~~e~~~~~~l-----~~h~niv~  102 (176)
                      ...||+|+.-.||.--..    ...+||+.....                 .......+|+.....+     ..+.++.+
T Consensus         6 ~~~i~~G~~R~cy~HP~d----p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPDD----PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CcccccCCCceEEECCCC----CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            357889988888866542    346777776543                 1133445555544443     14789999


Q ss_pred             eceeEEeccCCcceEEEEEecCCC------CChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         103 FFGAYMKKHQTHSEIWFVMQREAE------MPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       103 ~~~~~~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|...+    ...+-+|+|.+..      -+|.++++.+..+...  ......-..++...+|   +..|+.|+||.
T Consensus        82 ~~G~veT----~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~--~~~L~~f~~~l~~~~I---v~~dl~~~NIv  150 (199)
T PF10707_consen   82 FYGFVET----NLGLGLVVELIRDADGNISPTLEDYLKEGGLTEEL--RQALDEFKRYLLDHHI---VIRDLNPHNIV  150 (199)
T ss_pred             EeEEEec----CCceEEEEEEEECCCCCcCccHHHHHHcCCccHHH--HHHHHHHHHHHHHcCC---eecCCCcccEE
Confidence            9999999    6778999997632      3456666544444311  1122223788889999   99999999984

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.13  E-value=0.016  Score=44.06  Aligned_cols=87  Identities=7%  Similarity=-0.028  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhccCCCCcc--eeceeEEeccCC-cceEEEEEecCCCC-ChhhhcCC---CCCChhh--HhhhhhHHHHH
Q psy9091          83 DIKEEYRMLRDLSQHSNIP--DFFGAYMKKHQT-HSEIWFVMQREAEM-PPPRALKP---DELDLDN--LQDCGDRYELG  153 (176)
Q Consensus        83 ~~~~e~~~~~~l~~h~niv--~~~~~~~~~~~~-~~~~~lv~e~~~~g-~L~~~l~~---~~~~~~~--~~~~~~~~~l~  153 (176)
                      .+.+|...+..+ ...+|.  .+.+........ ...-++|||++++- +|.+++..   ...+...  ....++...++
T Consensus        74 ~a~rE~~~l~~L-~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~  152 (268)
T PRK15123         74 GADREWRAIHRL-HEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVR  152 (268)
T ss_pred             HHHHHHHHHHHH-HHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHH
Confidence            367787777765 333332  334444331100 23478999999976 78888741   1111111  11224555699


Q ss_pred             HHHhcCCCccccccCCCCCc
Q psy9091         154 YVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       154 ~lh~~~i~~~v~~~~~~~nv  173 (176)
                      .+|..|+   +|.|+.+.||
T Consensus       153 ~LH~~Gi---~HgDL~~~Ni  169 (268)
T PRK15123        153 DMHAAGI---NHRDCYICHF  169 (268)
T ss_pred             HHHHCcC---ccCCCChhhE
Confidence            9999999   9999999998

>KOG1235|consensus

Probab=97.01  E-value=0.0062  Score=50.51  Aligned_cols=117  Identities=14%  Similarity=0.125  Sum_probs=71.8

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--------------------------------hHHHH------HHH
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--------------------------------FIDDI------KEE   87 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--------------------------------~~~~~------~~e   87 (176)
                      +.||.-+.|+||++..+.  |+.||+|+.++.-+                                ..+.+      ..|
T Consensus       167 ~piaaASlaQVhrA~L~~--G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN--GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             chhhhcchhheEEEEecC--CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            578899999999999875  88999999876300                                00111      112


Q ss_pred             H----HHHHhccCCCC------cceeceeEEeccCCcceEEEEEecCCCCChhhhcC--CCCCChhhHhhhhhHHHHHHH
Q psy9091          88 Y----RMLRDLSQHSN------IPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQDCGDRYELGYV  155 (176)
Q Consensus        88 ~----~~~~~l~~h~n------iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~~l~~l  155 (176)
                      .    .+...+ .|-+      |++++.-+.      ..-.|+|||++|..+.|.-.  ....+...........-+.-+
T Consensus       245 A~Nae~~~~~f-~~~~~~~~V~VP~Vy~~~s------t~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qI  317 (538)
T KOG1235|consen  245 AKNAERFRENF-KDFSLLTYVLVPKVYWDLS------TKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQI  317 (538)
T ss_pred             HHhHHHHHHHH-HhcccccceeCCeehhhcC------cceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            2    222223 3333      455554443      34578999999999977643  444444332222233335556


Q ss_pred             HhcCCCccccccCCCCCcc
Q psy9091         156 IGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       156 h~~~i~~~v~~~~~~~nv~  174 (176)
                      ...|.   +|.|=||+|+-
T Consensus       318 f~~Gf---fHaDPHPGNil  333 (538)
T KOG1235|consen  318 FKTGF---FHADPHPGNIL  333 (538)
T ss_pred             HhcCC---ccCCCCCCcEE
Confidence            66666   99999999984

>KOG3741|consensus

Probab=96.95  E-value=0.0056  Score=50.33  Aligned_cols=115  Identities=13%  Similarity=0.093  Sum_probs=76.4

Q ss_pred             eeEEEEEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCC-CChhh
Q psy9091          54 ADVYEALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAE-MPPPR  131 (176)
Q Consensus        54 g~v~~~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~  131 (176)
                      .+-|++...- .|..+++|.+..... .......-+..++++ .|+|+|.+...|.+..-.+..+++|++|.++ ++|.+
T Consensus       290 ~Ttyk~~s~~-DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  290 ITTYKATSNV-DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ceeEeeeecc-CCceeeeeeeccccccCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            4578888766 778899998844322 122234456678888 9999999999998544447789999999985 55655


Q ss_pred             hcC---C-----------CCCChhhHhhh----hhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         132 ALK---P-----------DELDLDNLQDC----GDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       132 ~l~---~-----------~~~~~~~~~~~----~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                      +.-   +           .....++...|    |...+|.++|+.|+   -.+-+.+.+|
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGL---Ack~L~~~kI  424 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGL---ACKTLDLKKI  424 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCc---eeecccHhHe
Confidence            532   1           11111122223    66667999999999   5566666655

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.93  E-value=0.0018  Score=46.13  Aligned_cols=80  Identities=16%  Similarity=0.205  Sum_probs=57.2

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      ....+.|++|.+|.||.|.+.   +..+++|.-+.++ ....+..|..++..+ ...++.+  ..+-.     +..++.|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~---~~~~a~Kvrr~ds-~r~~l~kEakiLeil-~g~~~~p--~vy~y-----g~~~i~m   91 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR---GGEVALKVRRRDS-PRRNLEKEAKILEIL-AGEGVTP--EVYFY-----GEDFIRM   91 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc---CceEEEEEecCCc-chhhHHHHHHHHHHh-hhcCCCc--eEEEe-----chhhhhh
Confidence            445689999999999999994   4688999866543 356788899989887 5555543  22222     3345669


Q ss_pred             ecCCCCChhhhc
Q psy9091         122 QREAEMPPPRAL  133 (176)
Q Consensus       122 e~~~~g~L~~~l  133 (176)
                      ||+.|-+|.+.-
T Consensus        92 e~i~G~~L~~~~  103 (201)
T COG2112          92 EYIDGRPLGKLE  103 (201)
T ss_pred             hhhcCcchhhhh
Confidence            999987876553

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.88  E-value=0.016  Score=41.73  Aligned_cols=104  Identities=22%  Similarity=0.286  Sum_probs=56.2

Q ss_pred             EEEEEecCCCCeEEEEEEeecC--------------h-------------hhHHHHHHHHHHHHhccCCC--Ccceecee
Q psy9091          56 VYEALDTQNGNKKVSIKVQKIN--------------P-------------EFIDDIKEEYRMLRDLSQHS--NIPDFFGA  106 (176)
Q Consensus        56 v~~~~~~~~~~~~~aik~i~~~--------------~-------------~~~~~~~~e~~~~~~l~~h~--niv~~~~~  106 (176)
                      ||.|....  +..+|+|..+..              .             ....+...|...|..+ ...  +++.++..
T Consensus         2 Vy~~~~~~--~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l-~~~Gv~vP~p~~~   78 (188)
T PF01163_consen    2 VYHAIDPD--GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRL-YEAGVPVPKPYDY   78 (188)
T ss_dssp             EEEEEECT--TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHC-CCTT-SS--EEEE
T ss_pred             EEEEECCC--CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHH-HHCCccCCcEEEE
Confidence            67777643  667888876531              0             0133568899999998 444  45555433


Q ss_pred             EEeccCCcceEEEEEecCC--CCChhhhcCCC--CCChhhHhhhhhHHH-HHHHHhcCCCccccccCCCCCcc
Q psy9091         107 YMKKHQTHSEIWFVMQREA--EMPPPRALKPD--ELDLDNLQDCGDRYE-LGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~--~~~~~~~~~~~~~~~-l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                              ..-.|||||++  |..+..+....  ..+... ...+.+.. ...+|..|+   ||-|+-+.||.
T Consensus        79 --------~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~-~~~~il~~~~~~~~~~gi---vHGDLs~~NIl  139 (188)
T PF01163_consen   79 --------NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKE-LLEEILEEIIKMLHKAGI---VHGDLSEYNIL  139 (188)
T ss_dssp             --------ETTEEEEE--EETTEEGGCHHHCGGGGSTHHH-HHHHHHHHHHHHHHCTTE---EESS-STTSEE
T ss_pred             --------eCCEEEEEecCCCccchhhHHhccccchhHHH-HHHHHHHHHHHHHHhcCc---eecCCChhhEE
Confidence                    22479999998  54454332222  112211 11133332 344577777   99999999985

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601|consensus

Probab=96.79  E-value=0.00055  Score=56.18  Aligned_cols=125  Identities=17%  Similarity=0.146  Sum_probs=85.5

Q ss_pred             CeEEeeEEee--cCCeeEEEEEe--cCCCCeEEEEEEeec--C-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          41 RYELGYVIGS--GVCADVYEALD--TQNGNKKVSIKVQKI--N-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        41 ~~~~~~~lg~--G~~g~v~~~~~--~~~~~~~~aik~i~~--~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+.....+|.  |.+|.+|.+..  .. .+..+|+|....  . +.....-.++.....++..|.|.+..+..+..    
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~-s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~----  189 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSE-SPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG----  189 (524)
T ss_pred             hcccccccccCCCCCceeecccCCccc-CCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc----
Confidence            5667789999  99999998876  44 456788776332  2 12223345666667777688999998999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-C-CCCChhhH--hhhhhHH----HHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-P-DELDLDNL--QDCGDRY----ELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~-~~~~~~~~--~~~~~~~----~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+++.+|++. .+|..+.. . .......+  .......    ++..+|...+   +|.|++|.|+-
T Consensus       190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~---~~~~~kp~~i~  254 (524)
T KOG0601|consen  190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNI---VHDDLKPANIF  254 (524)
T ss_pred             CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcc---cccccchhhee
Confidence            899999999886 67766654 1 11111111  0112333    6788887777   99999999974

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.71  E-value=0.016  Score=42.21  Aligned_cols=90  Identities=13%  Similarity=0.123  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHhcc-CCCCcceeceeEEeccCCcceEEEEEecCCCC-ChhhhcCC-CCCChh--hHhhhhhHHHHHHHH
Q psy9091          82 DDIKEEYRMLRDLS-QHSNIPDFFGAYMKKHQTHSEIWFVMQREAEM-PPPRALKP-DELDLD--NLQDCGDRYELGYVI  156 (176)
Q Consensus        82 ~~~~~e~~~~~~l~-~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~-~~~~~~--~~~~~~~~~~l~~lh  156 (176)
                      ....+|...+..+. ..=.++..++...........-++|||++++. +|.+++.. ...+..  .....+....++-+|
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            34566776666552 12234455555554322223468999999874 78888853 111111  111224445599999


Q ss_pred             hcCCCccccccCCCCCcc
Q psy9091         157 GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       157 ~~~i~~~v~~~~~~~nv~  174 (176)
                      ..|+   +|.|+.+.||.
T Consensus       136 ~~gi---~H~Dl~~~NIL  150 (206)
T PF06293_consen  136 DAGI---YHGDLNPSNIL  150 (206)
T ss_pred             HCcC---CCCCCCcccEE
Confidence            9999   99999999984

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1023|consensus

Probab=96.34  E-value=0.0055  Score=50.19  Aligned_cols=75  Identities=23%  Similarity=0.284  Sum_probs=56.3

Q ss_pred             HhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhH----hhhhhHHHHHHHHhcCCCcccccc
Q psy9091          92 RDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNL----QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus        92 ~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~----~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +.+ .|.|+.+++|.+.+    ++..++|.+||..|+|.|.+.......+..    .......+|+|+|.--+.  .|=.
T Consensus         2 ~~l-~h~n~~~f~g~~~~----~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~--~hg~   74 (484)
T KOG1023|consen    2 RQL-DHDNLNKFIGASVD----GPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIG--YHGA   74 (484)
T ss_pred             ccc-chhhhhhheeeEec----CCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcce--eeee
Confidence            345 89999999999999    788999999999999999997433333222    122556689999977764  6666


Q ss_pred             CCCCCc
Q psy9091         168 LDTQNV  173 (176)
Q Consensus       168 ~~~~nv  173 (176)
                      +++.|-
T Consensus        75 l~s~nC   80 (484)
T KOG1023|consen   75 LKSSNC   80 (484)
T ss_pred             eccccc
Confidence            777664

>PLN02876 acyl-CoA dehydrogenase

Probab=96.13  E-value=0.075  Score=46.80  Aligned_cols=85  Identities=14%  Similarity=0.252  Sum_probs=55.4

Q ss_pred             EeeEEeecCCeeEEEEEecCCCC--eEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCc--ceeceeEEeccCCcceE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGN--KKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNI--PDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~--~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~ni--v~~~~~~~~~~~~~~~~  117 (176)
                      .++.++.|.++.+|...... .+  ..+++|..+...  .....+.+|..++..+..|.++  ++++..+.+.. ..+..
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~-~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~-v~G~~  119 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGN-GGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS-VIGTA  119 (822)
T ss_pred             eEEEeCCCCcCceEEEEECC-CCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC-cCCCc
Confidence            35788999999999887643 22  357777655432  2234678999999988335554  56666554411 01457


Q ss_pred             EEEEecCCCCChh
Q psy9091         118 WFVMQREAEMPPP  130 (176)
Q Consensus       118 ~lv~e~~~~g~L~  130 (176)
                      |+||||++|..+.
T Consensus       120 flVME~v~G~~~~  132 (822)
T PLN02876        120 FYIMEYLEGRIFV  132 (822)
T ss_pred             eEEEEecCCcccC
Confidence            8999999975543

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.70  E-value=0.16  Score=36.77  Aligned_cols=82  Identities=15%  Similarity=0.246  Sum_probs=54.7

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-CCcceeceeEEeccCCcceEEEEEec
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-SNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ++.++.|..+.+|.+....   ..+++|..... .....+..|..++..+..+ ..+..++...... ......+++|++
T Consensus         2 i~~l~~G~~n~~~~v~~~~---~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~-~~~~~~~~~~~~   76 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD---GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD-EFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT---SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET-EETSEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC---cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc-cccccceEEEEE
Confidence            4688999999999999843   58999987655 3445667788877776333 2345555433221 113457999999


Q ss_pred             CCCCChhh
Q psy9091         124 EAEMPPPR  131 (176)
Q Consensus       124 ~~~g~L~~  131 (176)
                      ++|..+..
T Consensus        77 i~g~~~~~   84 (239)
T PF01636_consen   77 IPGRPLDD   84 (239)
T ss_dssp             ESSEEHHH
T ss_pred             eccccccc
Confidence            99888776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.66  E-value=0.19  Score=38.44  Aligned_cols=123  Identities=22%  Similarity=0.219  Sum_probs=77.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----------h-------------hhHHHHHHHHHHHHh
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----------P-------------EFIDDIKEEYRMLRD   93 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----------~-------------~~~~~~~~e~~~~~~   93 (176)
                      ....-..+...||-|.=+.||.|.+..  +.++++|.=+..          .             -......+|...|..
T Consensus        88 ~r~~ve~iG~~IGvGKEsdVY~~~~~~--g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~  165 (304)
T COG0478          88 KRGIVEAIGTKIGVGKESDVYVAIDPK--GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQR  165 (304)
T ss_pred             HcChHHhhccccccCccceEEEEECCC--CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHH
Confidence            333345667899999999999999864  788898854321          0             113346889999998


Q ss_pred             ccCC-CCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCC
Q psy9091          94 LSQH-SNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQN  172 (176)
Q Consensus        94 l~~h-~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~n  172 (176)
                      +... -.|+..++        .+...+||||++|-.|...= -...+.+.. ...++.-+.-+...|+   ||-|+-.=|
T Consensus       166 L~~~G~~VP~P~~--------~nRHaVvMe~ieG~eL~~~r-~~~en~~~i-l~~il~~~~~~~~~Gi---VHGDlSefN  232 (304)
T COG0478         166 LYPEGVKVPKPIA--------WNRHAVVMEYIEGVELYRLR-LDVENPDEI-LDKILEEVRKAYRRGI---VHGDLSEFN  232 (304)
T ss_pred             hhhcCCCCCCccc--------cccceeeeehcccceeeccc-CcccCHHHH-HHHHHHHHHHHHHcCc---cccCCchhe
Confidence            8222 24444442        36689999999986554321 112222221 1133334555567777   999998888


Q ss_pred             cc
Q psy9091         173 VT  174 (176)
Q Consensus       173 v~  174 (176)
                      |.
T Consensus       233 Il  234 (304)
T COG0478         233 IL  234 (304)
T ss_pred             EE
Confidence            74

>PRK09902 hypothetical protein; Provisional

Probab=95.52  E-value=0.62  Score=34.28  Aligned_cols=120  Identities=10%  Similarity=-0.015  Sum_probs=72.8

Q ss_pred             eecCCeeEEEEEecCCCCeEEEEEEee-c---C---hhhHHHHHHHHHHHHhccC-CCCcceeceeEEeccCCcceEEEE
Q psy9091          49 GSGVCADVYEALDTQNGNKKVSIKVQK-I---N---PEFIDDIKEEYRMLRDLSQ-HSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        49 g~G~~g~v~~~~~~~~~~~~~aik~i~-~---~---~~~~~~~~~e~~~~~~l~~-h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      |+|+.+.|+......   ..+-+|... .   .   +....++.+|...+..+.. .-.++.+...-..+......-+||
T Consensus        27 ~rgG~SgV~r~~~~g---~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVERNG---KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEeCC---cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence            567888888876633   356677654 1   0   2245679999998887631 122444442222222224457899


Q ss_pred             EecCCC-CChhhhcCCCCC---Chh--hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAE-MPPPRALKPDEL---DLD--NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~-g~L~~~l~~~~~---~~~--~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|-++| -+|.+++.....   +..  ......+...++-+|..|+   .|.|+-+-||.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv---~Hgdly~khIl  160 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNR---QHGCCYVRHIY  160 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCC---cCCCCCHhhee
Confidence            996653 577777753222   221  1122255566999999999   99999888873

>PRK10593 hypothetical protein; Provisional

Probab=95.32  E-value=0.2  Score=38.66  Aligned_cols=85  Identities=12%  Similarity=0.104  Sum_probs=56.6

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC--CCcceeceeEEeccCCcceEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..-.+.||.|..+.+|......   ..+.+|..+.. .....+..|...++.+..+  -.++++++.+.... ..+..++
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~---~~~~~k~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~-~~g~~~L   90 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQ---GNPMPLMARSF-STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ-SPGPDVL   90 (297)
T ss_pred             hheeeecCCccceeEEEEEcCC---CCEEEEEeccc-ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCC-cCCCeEE
Confidence            3445789999999999887633   34566764331 1234678899888887433  35677776654310 0355899


Q ss_pred             EEecCCCCChhh
Q psy9091         120 VMQREAEMPPPR  131 (176)
Q Consensus       120 v~e~~~~g~L~~  131 (176)
                      |||+++|+++.+
T Consensus        91 VmE~i~G~~~~~  102 (297)
T PRK10593         91 LLERLRGVSVEA  102 (297)
T ss_pred             EEeccCCEecCC
Confidence            999999988765

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.76  E-value=0.39  Score=35.59  Aligned_cols=77  Identities=18%  Similarity=0.301  Sum_probs=50.0

Q ss_pred             EEeecCC-eeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCC
Q psy9091          47 VIGSGVC-ADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREA  125 (176)
Q Consensus        47 ~lg~G~~-g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~  125 (176)
                      .|..|.. ..||+...   .+..+.+|..+...  ......|+.++..+..+--+.+++.....    .+..++|||+++
T Consensus         5 ~~~~g~~~~~v~~~~~---~~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----~~~~~lv~e~i~   75 (244)
T cd05150           5 RVTEGQSGATVYRLDG---KNPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSD----DGRAWLLTSAVP   75 (244)
T ss_pred             ecCCCCCcCeEEEEcC---CCCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEec----CCccEEEEEeeC
Confidence            4445555 67888865   23567888765542  23466788888777444445566666554    456789999999


Q ss_pred             CCChhhh
Q psy9091         126 EMPPPRA  132 (176)
Q Consensus       126 ~g~L~~~  132 (176)
                      |.++...
T Consensus        76 G~~l~~~   82 (244)
T cd05150          76 GVPAAAL   82 (244)
T ss_pred             CccHhHh
Confidence            8777543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.75  E-value=0.32  Score=36.00  Aligned_cols=72  Identities=15%  Similarity=0.124  Sum_probs=49.0

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCC--cceeceeEEeccCCcceEEEEEec
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN--IPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n--iv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      ..+|.|..+.||+..     +..+++|..+... ......+|..++..+ ...+  +...+.....    .+...++||+
T Consensus         7 ~~i~~G~t~~~y~~~-----~~~~VlR~~~~~~-~~~~i~~E~~~l~~l-~~~glpvP~~~~~~~~----~~~~glv~e~   75 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-----TGKWMLKLYNPGF-DKETIKREFDASRKV-FSLGIPTPHPFDLVED----GGRLGLIYEL   75 (226)
T ss_pred             eeecCCCCcceeEec-----CCCEEEEeCCCCC-CHHHHHHHHHHHHHH-HHcCCCCCceEEEEec----CCeeeeeeee
Confidence            578999999999742     3356778766532 234468888888876 3332  4555666555    5667889999


Q ss_pred             CCCCC
Q psy9091         124 EAEMP  128 (176)
Q Consensus       124 ~~~g~  128 (176)
                      ++|..
T Consensus        76 i~G~~   80 (226)
T TIGR02172        76 IVGKR   80 (226)
T ss_pred             cCCcc
Confidence            99863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1266|consensus

Probab=93.92  E-value=0.018  Score=44.97  Aligned_cols=65  Identities=17%  Similarity=0.172  Sum_probs=47.7

Q ss_pred             CCCCcceeceeEEeccC-CcceEEEEEecCCCCChhhhcCCCCC-----Chhh-Hhhh-hhHHHHHHHHhcCC
Q psy9091          96 QHSNIPDFFGAYMKKHQ-THSEIWFVMQREAEMPPPRALKPDEL-----DLDN-LQDC-GDRYELGYVIGSGV  160 (176)
Q Consensus        96 ~h~niv~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~-~~~~-~~~~~l~~lh~~~i  160 (176)
                      -|.|+++++.++.++.. ......+++||+..|++..||++...     .... .+++ +++-+|.|||++.-
T Consensus       125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            68999999999876542 34568899999999999999973211     1111 2344 77889999998865

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=91.82  E-value=1.3  Score=35.74  Aligned_cols=77  Identities=22%  Similarity=0.229  Sum_probs=51.5

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--------hhhHHHHHHHHHHHHhccCC--CCcceeceeEEeccCCc
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--------PEFIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--------~~~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~~~~  114 (176)
                      .+.+|.|.+..||++.... .+..+.+|.-.+.        +........|...+..+...  ..++.++...      .
T Consensus        31 ~~elggGn~N~VyrV~~~~-g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D------~  103 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTE-GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD------E  103 (401)
T ss_pred             eeEcCCCceEEEEEEEeCC-CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC------C
Confidence            4688999999999999854 3357899975421        12344567777777775332  3455655443      3


Q ss_pred             ceEEEEEecCCCCC
Q psy9091         115 SEIWFVMQREAEMP  128 (176)
Q Consensus       115 ~~~~lv~e~~~~g~  128 (176)
                      ...++|||++++..
T Consensus       104 ~~~~lVME~L~~~~  117 (401)
T PRK09550        104 ELAVTVMEDLSDHK  117 (401)
T ss_pred             CCCEEEEecCCCcc
Confidence            44789999998644

>KOG0606|consensus

Probab=91.56  E-value=0.042  Score=48.76  Aligned_cols=128  Identities=15%  Similarity=0.111  Sum_probs=77.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh----hHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~----~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+.+.+.+.+.+|+++.+....... .+-..+++......+    ..+....+-.++-.. .+|-++.....+..    
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~-sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~----  875 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAG-SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPC----  875 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccc-cccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCC----
Confidence            33457777788899999988776544 443333333222111    111122222222222 45666655555545    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+.+|+++|+.+++|...|. ....+....+..  ..-+++++||..-+   +|+|++|+|..
T Consensus       876 rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r---~h~~~~p~~~l  936 (1205)
T KOG0606|consen  876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLR---KHRDLKPDSLL  936 (1205)
T ss_pred             CCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchh---hcccccccchh
Confidence            688999999999999999987 222222122222  55668999998776   99999999863

>KOG1033|consensus

Probab=90.26  E-value=0.13  Score=42.27  Aligned_cols=55  Identities=11%  Similarity=0.053  Sum_probs=35.9

Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhh-Hhhh----hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDN-LQDC----GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~-~~~~----~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+|+.|++|..++|.++|. +...+... ....    +..-++.|   ++.   +|+|+||.||-
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~---ihrdlkp~nif  388 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGL---IHRDLKPSNIF  388 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccc---hhhhccccccc
Confidence            345999999999999999996 22222211 1111    11222445   777   99999999984

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=90.01  E-value=4.9  Score=30.97  Aligned_cols=77  Identities=12%  Similarity=0.052  Sum_probs=44.4

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc--CCCCcceeceeEEeccCCcceEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      .+..+.++-|....+|....   .+..+-+|.-..  .....+..|..-++.+.  .--.+++.++....    .+..+|
T Consensus        19 i~~~~~v~GG~i~~a~~~~~---~~~~~FvK~~~~--~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~----~~~~fL   89 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDT---DGGSYFVKVNSE--SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY----DDDAFL   89 (288)
T ss_dssp             --EEEEE--SSSSEEEEEET---TS-EEEEEEEEG--GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-----SSCCEE
T ss_pred             eeeeEecCCCChhheEEEEC---CCccEEEEecCh--hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee----cCCceE
Confidence            34557888888899998873   467788887662  22345677777777762  23456677777766    455699


Q ss_pred             EEecCCCC
Q psy9091         120 VMQREAEM  127 (176)
Q Consensus       120 v~e~~~~g  127 (176)
                      +|||++.+
T Consensus        90 lle~l~~~   97 (288)
T PF03881_consen   90 LLEFLEMG   97 (288)
T ss_dssp             EEE-----
T ss_pred             EEEeecCC
Confidence            99999854

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=89.64  E-value=3.1  Score=30.44  Aligned_cols=103  Identities=14%  Similarity=0.066  Sum_probs=54.2

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecC
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQRE  124 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~  124 (176)
                      .+.+..|-...+|++....+.+..+.+|.............+|+.++..+..+.-.+++++.  .    .+  .++|||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~--~----~~--~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYAT--F----QN--GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEE--e----CC--cEEEEee
Confidence            35677787888998865310135788886654322112234677777777333323333332  2    11  3799999


Q ss_pred             CCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         125 AEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       125 ~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      +|-++...-   ..+.  .........|+.+|....
T Consensus        75 ~G~~l~~~~---~~~~--~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          75 PGRTLEPED---LRNP--KIYRLIARELAKLHSIKP  105 (235)
T ss_pred             CCCcCCHHH---ccCh--HHHHHHHHHHHHHhcccc
Confidence            986653220   0010  112234445777776554

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2270|consensus

Probab=88.53  E-value=10  Score=30.85  Aligned_cols=83  Identities=25%  Similarity=0.253  Sum_probs=52.5

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---------------------------hhhHHHHHHHHHHHHhcc
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---------------------------PEFIDDIKEEYRMLRDLS   95 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---------------------------~~~~~~~~~e~~~~~~l~   95 (176)
                      .+--+|..|.-..||.+....  |..+|||+....                           +.-..+...|+.-++++ 
T Consensus       147 ~inGCiSTGKEANVYHat~~d--G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl-  223 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEED--GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL-  223 (520)
T ss_pred             ecccccccCccceeEeeecCC--CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH-
Confidence            344677888888899988754  667999986531                           01133457788888887 


Q ss_pred             CCCCcceeceeEEeccCCcceEEEEEecCCC-CChhhhcC
Q psy9091          96 QHSNIPDFFGAYMKKHQTHSEIWFVMQREAE-MPPPRALK  134 (176)
Q Consensus        96 ~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~  134 (176)
                      ....|...--....      ...|||+|+.+ |.....|+
T Consensus       224 ~~aGIP~PePIlLk------~hVLVM~FlGrdgw~aPkLK  257 (520)
T KOG2270|consen  224 NNAGIPCPEPILLK------NHVLVMEFLGRDGWAAPKLK  257 (520)
T ss_pred             HhcCCCCCCceeee------cceEeeeeccCCCCcCcccc
Confidence            66665544433332      25789999963 33344444

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=88.11  E-value=0.27  Score=32.57  Aligned_cols=30  Identities=27%  Similarity=0.243  Sum_probs=26.2

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecC
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN   77 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~   77 (176)
                      +.++.|+.|+||+|....  |..||+|+.++.
T Consensus        17 ~PlasASiaQVh~a~l~~--g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKD--GEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecc--cchhhhhhcchH
Confidence            578999999999999864  789999998875

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=86.56  E-value=1.9  Score=30.99  Aligned_cols=79  Identities=11%  Similarity=0.024  Sum_probs=46.6

Q ss_pred             HHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChh-------hhcCCCCCChhhHhhhhhHHHHHHHHhc
Q psy9091          86 EEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPP-------RALKPDELDLDNLQDCGDRYELGYVIGS  158 (176)
Q Consensus        86 ~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~-------~~l~~~~~~~~~~~~~~~~~~l~~lh~~  158 (176)
                      .|.-++..+.+.+++++++|.|-.        ++++||.+.+++.       +++ ...+........+.+..+.+++..
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~~~l~~~~-~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAGSLYGIYRPLSQFL-QSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCcccccccccccccc-ccCHHHHHHHHHHHHHHHHHHhcC
Confidence            466777777444699999999832        5689999987664       232 112222111112333345555553


Q ss_pred             CCCccccccCCCCCc
Q psy9091         159 GVCADVYEALDTQNV  173 (176)
Q Consensus       159 ~i~~~v~~~~~~~nv  173 (176)
                      -.-.....|++++|+
T Consensus        79 ~~~~~~lcDv~~~nf   93 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNF   93 (188)
T ss_pred             CCCcEEEeecchHHe
Confidence            333457788888886

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=85.51  E-value=9.6  Score=28.97  Aligned_cols=77  Identities=9%  Similarity=0.000  Sum_probs=45.7

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCC-Ccceecee------EEeccCCcceE
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS-NIPDFFGA------YMKKHQTHSEI  117 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~-niv~~~~~------~~~~~~~~~~~  117 (176)
                      .+.+..|....+|.....   +..+++|.....  .......|+.++..+..+. .++.++..      ...    .+..
T Consensus        19 i~~i~~G~~n~~y~v~~~---~~~~vLr~~~~~--~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~----~~~~   89 (296)
T cd05153          19 FEGISAGIENTNYFVTTD---SGRYVLTLFEKV--SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSEL----AGKP   89 (296)
T ss_pred             eecccCccccceEEEEeC---CCcEEEEEcCCC--ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeee----CCce
Confidence            456677777788987653   346888887642  2234556666666662221 23333321      111    3456


Q ss_pred             EEEEecCCCCChh
Q psy9091         118 WFVMQREAEMPPP  130 (176)
Q Consensus       118 ~lv~e~~~~g~L~  130 (176)
                      +++++|++|..+.
T Consensus        90 ~~l~~~i~G~~~~  102 (296)
T cd05153          90 AALVEFLAGEHLT  102 (296)
T ss_pred             EEEEEeCCCCCCC
Confidence            8999999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1033|consensus

Probab=84.54  E-value=0.21  Score=41.10  Aligned_cols=73  Identities=21%  Similarity=0.363  Sum_probs=56.8

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      .....+.+....++|.|+||.|+.+.... .+..++||.|....  .......++..-+..+ .|++++.+.-.|..
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~-d~~~~avkritlkn~e~s~~rvl~~~~s~a~f-eh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKA-DENKYAVKRITLKNREESRSRVLREVSSLAEF-EHPGIKRYFHAWYE  118 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccc-cchhhHHHHhcccchhhhhhhhhccccchhhh-cccchhhheeceec
Confidence            34555678889999999999999988776 55678999887642  3456678888888888 99999988766654

>TIGR02721 ycfN_thiK thiamine kinase

Probab=83.75  E-value=8.4  Score=28.72  Aligned_cols=72  Identities=14%  Similarity=0.165  Sum_probs=41.4

Q ss_pred             EeecCCeeEEEEEecCCCCeEEEEEEeecChhhH-HHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCC
Q psy9091          48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFI-DDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAE  126 (176)
Q Consensus        48 lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~-~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~  126 (176)
                      +..|..+.+|+...   .+..+.+|......... -....|..+++.+..+.-...++..  .    .  -++||||++|
T Consensus         4 ~~~G~tn~~y~~~~---~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~--~----~--~~~v~e~i~G   72 (256)
T TIGR02721         4 LSGGLTNRSWRIEH---PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILV--N----E--HWLLVEWLEG   72 (256)
T ss_pred             CCCcCcCCeEEEEe---CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEE--e----C--CEEEEEeccC
Confidence            34566677887763   45567788654432111 1346788888887332222333322  2    2  2689999998


Q ss_pred             CChh
Q psy9091         127 MPPP  130 (176)
Q Consensus       127 g~L~  130 (176)
                      ..+.
T Consensus        73 ~~~~   76 (256)
T TIGR02721        73 EVIT   76 (256)
T ss_pred             cccc
Confidence            6654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=82.12  E-value=8.1  Score=29.54  Aligned_cols=102  Identities=16%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             eEEeecCCeeEEEEEecC-----CCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          46 YVIGSGVCADVYEALDTQ-----NGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~-----~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      +.+..|-...+|+.....     ..+..+++|..............|..++..+..+.-..+++..+..        .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--------~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN--------GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC--------Cch
Confidence            455566667788776432     0146788888655432223456777777776333223344444321        358


Q ss_pred             EecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         121 MQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      +||++|..+....   ..+.  ....+....|+.+|....
T Consensus        76 ~e~i~G~~l~~~~---~~~~--~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          76 EEFIPSRTLTTEE---LRDP--DISAEIARRMAKLHSIVV  110 (302)
T ss_pred             hheeCCCcCCHhH---cCCc--HHHHHHHHHHHHhhCCCC
Confidence            9999987654321   0111  112344556888887654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG0576|consensus

Probab=82.12  E-value=0.35  Score=41.30  Aligned_cols=80  Identities=11%  Similarity=0.064  Sum_probs=54.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCC-cceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN-IPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n-iv~~~~~~~~~~~~~~  115 (176)
                      +...-+......++++++++++..... .... ..+.+...    .....++.++.++ +||| .+..++.+..    ..
T Consensus       239 Dk~kws~~fh~fvK~altknpKkRpta-eklL-~h~fvs~~----l~~rl~~eLLdK~-n~P~~~v~~~~d~~~----E~  307 (829)
T KOG0576|consen  239 DKTKWSEFFHNFVKGALTKNPKKRPTA-EKLL-QHPFVSQT----LSRRLAIELLDKV-NNPNPVVRYLEDYDG----ED  307 (829)
T ss_pred             CCccchHHHHHHHHHHhcCCCccCCCh-hhhe-eceeeccc----hhhHHHHHHHHHc-cCCCCcccccccCCc----cc
Confidence            334445555677888999888877654 3222 23433332    3356677889998 9999 6676766666    78


Q ss_pred             eEEEEEecCCCC
Q psy9091         116 EIWFVMQREAEM  127 (176)
Q Consensus       116 ~~~lv~e~~~~g  127 (176)
                      ..++.++++.+|
T Consensus       308 ~~~i~~~i~s~~  319 (829)
T KOG0576|consen  308 YLWIPMRICSTG  319 (829)
T ss_pred             ccchhhhhhcCC
Confidence            899999999887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	176
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-10

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 21  PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
           P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + G +  +IKV  +  + 
Sbjct: 7   PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDE 63
Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEIWFVMQ 122
            ++IK+E  ML+  S H NI  ++GA++KK+      ++W VM+
Sbjct: 64  EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	176
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	9e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-13
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-13
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-13
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-12
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-10
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	8e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	9e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	9e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-04
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-04

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 97.4 bits (243), Expect = 5e-25
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 5/107 (4%)

Query: 17  AEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI 76
           A   P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + G +  +IKV  +
Sbjct: 3   ASDSPARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDV 59

Query: 77  NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEIWFVM 121
             +  ++IK+E  ML+  S H NI  ++GA++KK+      ++W VM
Sbjct: 60  TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 9e-05
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 125 AEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQN 172
           A   P R+L  DE+DL  L+D    +EL  ++G+G    VY+    + 
Sbjct: 3   ASDSPARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKT 48

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 70.1 bits (172), Expect = 5e-15
 Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 14  KREAEMPPPRALKPDELDLDNLQ-DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK 72
               ++  P   +  +LD D+L     + +++   +G G    VY+A+  + G + V+IK
Sbjct: 2   LETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETG-QIVAIK 60

Query: 73  VQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
              +  + + +I +E  +++      ++  ++G+Y K      ++W VM
Sbjct: 61  QVPVESD-LQEIIKEISIMQQ-CDSPHVVKYYGSYFKNT----DLWIVM 103

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.9 bits (156), Expect = 8e-13
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 10/115 (8%)

Query: 10  QEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKV 69
           QE+R ++ +       K   +      + G   +    IG G    VY+ LDT+    +V
Sbjct: 1   QEERNQQQDDIEELETKAVGMS-----NDGRFLKFDIEIGRGSFKTVYKGLDTETT-VEV 54

Query: 70  SIK---VQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +      +K+        KEE  ML+ L QH NI  F+ ++    +    I  V 
Sbjct: 55  AWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVT 108

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 63.9 bits (156), Expect = 9e-13
 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRD 93
            D  + +     IG G   +V++ +D +   K V+IK+  +    + I+DI++E  +L  
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQ-KVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
                 +  ++G+Y+K      ++W +M
Sbjct: 77  C-DSPYVTKYYGSYLKDT----KLWIIM 99

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 64.2 bits (156), Expect = 9e-13
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 26  KPDELDLDNLQDCGDRYELGYVIGSGVC--ADVYEALDTQNGNKKVSIKV---QKINPEF 80
                 + +    G  YEL  VIG G      V  A     G + V+++    +  + E 
Sbjct: 11  NLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTG-EYVTVRRINLEACSNEM 69

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +  ++ E  + +    H NI  +   ++  +    E+W V 
Sbjct: 70  VTFLQGELHVSKLF-NHPNIVPYRATFIADN----ELWVVT 105

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           D YEL  VIGSG  A V  A       +KV+IK    +K     +D++ +E + +     
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKK-EKVAIKRINLEKCQTS-MDELLKEIQAMS-QCH 71

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H NI  ++ +++ K     E+W VM
Sbjct: 72  HPNIVSYYTSFVVKD----ELWLVM 92

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 15  REAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQ 74
             A         PD  +L    D    +     IG G    VY A D +N  + V+IK  
Sbjct: 29  MPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNS-EVVAIKKM 87

Query: 75  KINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
             +     E   DI +E R L+ L +H N   + G Y+++H      W VM
Sbjct: 88  SYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREH----TAWLVM 133

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 61.2 bits (149), Expect = 8e-12
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 31  DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF-IDDIKEEYR 89
            +    D  + +E+   +G G    VY+A + + G    + KV +   E  ++D   E  
Sbjct: 10  HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIE 68

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +L     H  I    GAY    +    +W ++
Sbjct: 69  ILAT-CDHPYIVKLLGAYYHDGK----LWIMI 95

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
            +    +   +   +      + +D   D     +    IG G    V  A +  +G ++
Sbjct: 15  TENLYFQSGVVTHEQFKAALRMVVDQ-GDPRLLLDSYVKIGEGSTGIVCLAREKHSG-RQ 72

Query: 69  VSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           V++K+  +   +  + +  E  ++RD  QH N+ + + +Y+       E+W +M
Sbjct: 73  VAVKMMDLRKQQRRELLFNEVVIMRD-YQHFNVVEMYKSYLVGE----ELWVLM 121

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 34  NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLR 92
           ++ D   +Y     IG G    VY A+D   G ++V+I+   +      + I  E  ++R
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMR 72

Query: 93  DLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           + +++ NI ++  +Y+       E+W VM
Sbjct: 73  E-NKNPNIVNYLDSYLVGD----ELWVVM 96

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
              D Y+L   +G G  ++V+EA++  N  +KV +K   + P     IK E ++L +L  
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNN-EKVVVK--ILKPVKKKKIKREIKILENLRG 89

Query: 97  HSNI 100
             NI
Sbjct: 90  GPNI 93

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 12/121 (9%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNG--- 65
             + +  E         + +  D    ++   +Y+   VIG GV + V   +    G   
Sbjct: 63  DAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEF 122

Query: 66  -----NKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV 120
                         +   E  +  + E  +LR ++ H +I     +Y    ++ S ++ V
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY----ESSSFMFLV 178

Query: 121 M 121
            
Sbjct: 179 F 179

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 53.1 bits (128), Expect = 6e-09
 Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 23  RALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEF 80
           +      +     Q   +  E    +GSG C  V++    + G   +++K   +  N E 
Sbjct: 8   KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTG-HVIAVKQMRRSGNKEE 66

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
              I  +  ++        I   FG ++       +++  M
Sbjct: 67  NKRILMDLDVVLKSHDCPYIVQCFGTFITNT----DVFIAM 103

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRD 93
              +RY +  ++G G   +V +  D     ++ ++KV        +    I  E  +L+ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKK 77

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           L  H NI   F       +  S  + V +
Sbjct: 78  LD-HPNIMKLFEIL----EDSSSFYIVGE 101

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 20  PPPRALKPDELDLDNLQDCGDRYEL-GYVIGSGVCADVYEALDTQNGNK---KVSIKVQK 75
                L  + L   ++++  + Y L    +G G  A V + +    G +   K  +K ++
Sbjct: 8   SSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK-FLKKRR 66

Query: 76  INPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
              +   +I  E  +L        + +    Y    +  SEI  ++
Sbjct: 67  RGQDCRAEILHEIAVLELAKSCPRVINLHEVY----ENTSEIILIL 108

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 22  PRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINP 78
            +  +  E  ++      D Y++   +G G  + V   +    G +   K+ I  +K++ 
Sbjct: 11  QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSA 69

Query: 79  EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
                ++ E R+ R L  H NI     +     Q  S  + V  
Sbjct: 70  RDFQKLEREARICRKLQ-HPNIVRLHDSI----QEESFHYLVFD 108

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 25  LKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKV--SIKVQKINPEFID 82
             P            + Y+    +GSG   +V    D     ++    I+   ++     
Sbjct: 22  ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS 81

Query: 83  DIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            + EE  +L+ L  H NI   +  +    +     + VM+
Sbjct: 82  KLLEEVAVLKLLD-HPNIMKLYDFF----EDKRNYYLVME 116

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 49.5 bits (119), Expect = 7e-08
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 8/89 (8%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKV--SIKVQKINPEFIDDIKEEYRMLRD 93
               D +     +GSG   DV+   +  +G ++V  +I   +     ++ I+ E  +L+ 
Sbjct: 18  GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKS 76

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           L  H NI   F  +    + +  ++ VM+
Sbjct: 77  LD-HPNIIKIFEVF----EDYHNMYIVME 100

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 49.6 bits (119), Expect = 8e-08
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
             +E   V+G G    V +A +  +  +  +IK  +   E +  I  E  +L  L  H  
Sbjct: 6   SDFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILSEVMLLASL-NHQY 63

Query: 100 IPDFFGAYMKKH---------QTHSEIWFVM 121
           +  ++ A++++          +  S ++  M
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQM 94

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 14/95 (14%)

Query: 29  ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKE 86
           +   ++L+D G        IG G    V + +   +G + +++K     ++ +    +  
Sbjct: 18  DFTAEDLKDLG-------EIGRGAYGSVNKMVHKPSG-QIMAVKRIRSTVDEKEQKQLLM 69

Query: 87  EYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +  ++   S    I  F+GA  ++     + W  M
Sbjct: 70  DLDVVMRSSDCPYIVQFYGALFRE----GDCWICM 100

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 12  KRKREAEMPPPRALKPDELDLD---NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
           K+  E E+   +  + +          +   D +E    +G+G    V++     +G   
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSG-LV 60

Query: 69  VSIKV--QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           ++ K+   +I P   + I  E ++L +      I  F+GA+        EI   M
Sbjct: 61  MARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSD----GEISICM 110

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV-QKINPEFIDDIKEEYRMLRDL 94
            D    Y L   IG G   +V  A+       + + K   K   E +D  K+E  +++ L
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTR-IRRAAKKIPKYFVEDVDRFKQEIEIMKSL 63

Query: 95  SQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
             H NI   +  +    + +++I+ VM+
Sbjct: 64  D-HPNIIRLYETF----EDNTDIYLVME 86

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 8/101 (7%)

Query: 25  LKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFI 81
             P      +     DRY+   V+G G   +V    D   G +   KV  K Q       
Sbjct: 11  ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK 70

Query: 82  DDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           + +  E ++L+ L  H NI   +  +    +     + V +
Sbjct: 71  ESLLREVQLLKQLD-HPNIMKLYEFF----EDKGYFYLVGE 106

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 23/116 (19%)

Query: 15  REAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK------- 67
           R+A +P   +               + YE   ++G GV + V   +      +       
Sbjct: 2   RDAALPGSHSTH----------GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID 51

Query: 68  --KVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
                    +   E  +   +E  +LR +S H NI      Y    +T++  + V 
Sbjct: 52  VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY----ETNTFFFLVF 103

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
           D Y++   +G G  + V   +    G +   K+ I  +K++      ++ E R+ R L  
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARICRKLQ- 63

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           H NI     +     Q  S  + V  
Sbjct: 64  HPNIVRLHDSI----QEESFHYLVFD 85

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
           Q   +      ++G G    V     +  G + V++K   +  +F D    E ++L +  
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQG-RPVAVKR--MLIDFCDIALMEIKLLTESD 66

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
            H N+  ++ +      T   ++  +
Sbjct: 67  DHPNVIRYYCSE----TTDRFLYIAL 88

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 34  NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRML 91
           +++   D  E    +G G    V +     +G + +++K     +N +    +  +  + 
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSG-QIMAVKRIRATVNSQEQKRLLMDLDIS 59

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
                      F+GA  ++     ++W  M
Sbjct: 60  MRTVDCPFTVTFYGALFRE----GDVWICM 85

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 20  PPPRALKPDE-LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP 78
           P   +L PD  +D  N     D +E+   +G G  + VY               ++K   
Sbjct: 32  PGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD 91

Query: 79  EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           +    ++ E  +L  LS H NI      +    +T +EI  V++
Sbjct: 92  K--KIVRTEIGVLLRLS-HPNIIKLKEIF----ETPTEISLVLE 128

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 7/98 (7%)

Query: 26  KPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKV--SIKVQKINPEFIDD 83
                +L       +RY +  ++G G   +V +  D     +     I       +    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 84  IKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           I  E  +L+ L  H NI   F       +  S  + V 
Sbjct: 68  ILREVELLKKLD-HPNIMKLFEIL----EDSSSFYIVG 100

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 13/115 (11%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
                  +  +         +          D Y++   +G+G    V+   +   G   
Sbjct: 126 GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATG-NN 184

Query: 69  VSIK-VQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            + K V   +    + +++E + +  L +H  + +   A+    +  +E+  + +
Sbjct: 185 FAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAF----EDDNEMVMIYE 234

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
           ++  ++Y +   +G G    V+  ++T +  K    K  K+       +K+E  +L    
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSK-KTYMAKFVKVKGTDQVLVKKEISILNIA- 58

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +H NI     ++    ++  E+  + 
Sbjct: 59  RHRNILHLHESF----ESMEELVMIF 80

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNI 100
            +    V+G G    +       +  + V++K   I PE       E ++LR+  +H N+
Sbjct: 25  SFCPKDVLGHGAEGTIVYR-GMFDN-RDVAVKR--ILPECFSFADREVQLLRESDEHPNV 80

Query: 101 PDFFGAYMKKHQTHSEIWFVM 121
             +F       +     +  +
Sbjct: 81  IRYFCTE----KDRQFQYIAI 97

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 12/105 (11%)

Query: 24  ALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV------QKIN 77
             +       +L +   +Y L   IG G    V  A++ Q      +IK+      ++IN
Sbjct: 10  GRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTR-AIRAIKIMNKNKIRQIN 68

Query: 78  PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           P+ ++ IK E R+++ L  H NI   +  Y    +    I  VM+
Sbjct: 69  PKDVERIKTEVRLMKKLH-HPNIARLYEVY----EDEQYICLVME 108

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV-QKINPEFIDDIKEEYRMLRDLSQHS 98
             +    V+GSG  ++V+       G K  ++K  +K        ++ E  +L+ +  H 
Sbjct: 9   KTFIFMEVLGSGAFSEVFLVKQRLTG-KLFALKCIKKSPAFRDSSLENEIAVLKKIK-HE 66

Query: 99  NIPDFFGAYMKKHQTHSEIWFVMQ 122
           NI      Y    ++ +  + VMQ
Sbjct: 67  NIVTLEDIY----ESTTHYYLVMQ 86

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 46.9 bits (112), Expect = 9e-07
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 9/90 (10%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFIDDIKEEYRMLR 92
               + Y+L   +G G  + V   +    G +    + I  +K++      ++ E R+ R
Sbjct: 7   TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMI-INTKKLSARDHQKLEREARICR 65

Query: 93  DLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            L  H NI     +           + +  
Sbjct: 66  LLK-HPNIVRLHDSI----SEEGHHYLIFD 90

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 9/116 (7%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGY--VIGSGVCADVYEALDTQNGN 66
           ++       ++P P A     +           Y +    ++G G    V++  +T  G 
Sbjct: 56  SKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATG- 114

Query: 67  KKVSIKV-QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
            K++ K+ +    +  +++K E  ++  L  H+N+   + A+    ++ ++I  VM
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAF----ESKNDIVLVM 165

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK-VQKINPEFIDDIKEEYRMLRDLSQH 97
              Y     +G G  + V       +G    ++K +     +  ++ + E  M R    H
Sbjct: 28  NKHYLFIQKLGEGGFSYVDLVEGLHDG-HFYALKRILCHEQQDREEAQREADMHRLF-NH 85

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI       +++     E W ++
Sbjct: 86  PNILRLVAYCLRERGAKHEAWLLL 109

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIK-VQKINPEFIDDIKEEYRMLRDLSQHS 98
           D      V+G G    VY   D  N   +++IK + + +  +   + EE  + + L +H 
Sbjct: 22  DENGDRVVLGKGTYGIVYAGRDLSNQ-VRIAIKEIPERDSRYSQPLHEEIALHKHL-KHK 79

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
           NI  + G++ +       I   M
Sbjct: 80  NIVQYLGSFSENGF----IKIFM 98

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNG--------NKKVSIKVQKINPEFIDDIKEE 87
           +   D Y +   +GSG C +V  A + +          +K+          +   +++ E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 88  YRMLRDLSQHSNIPDFFGAY 107
             +L+ L+ H  I      +
Sbjct: 191 IEILKKLN-HPCIIKIKNFF 209

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 19/130 (14%)

Query: 6   HELAQEKRKREAEMPPPRALKPDELDLDNLQ------------DCGDRYELGYVIGSGVC 53
           H       K   +   P+    D+   D  +               D Y++   +GSG  
Sbjct: 5   HHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAF 64

Query: 54  ADVYEALDTQNGNKKVSIKV-QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ 112
             V+  ++   G +    K      P     +K E  ++  L  H  + +   A+    +
Sbjct: 65  GVVHRCVEKATG-RVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAF----E 118

Query: 113 THSEIWFVMQ 122
              E+  +++
Sbjct: 119 DKYEMVLILE 128

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKV--SIKVQKINPEFIDDIKEEYRMLRDLSQH 97
           ++Y     IG G          T++G + V   I + +++ +  ++ + E  +L ++ +H
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KH 82

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI  +  ++ +       ++ VM
Sbjct: 83  PNIVQYRESFEEN----GSLYIVM 102

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G+RY LG  IGSG   D+Y   D   G ++V+IK++ +  +    +  E ++ + +    
Sbjct: 8   GNRYRLGRKIGSGSFGDIYLGTDIAAG-EEVAIKLECVKTK-HPQLHIESKIYKMMQGGV 65

Query: 99  NIPDFF 104
            IP   
Sbjct: 66  GIPTIR 71

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 10/85 (11%)

Query: 40  DRYELGY---VIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
             Y+L      +G G  +   + +  ++  +  ++K+  I+     + ++E   L+    
Sbjct: 8   QHYDLDLKDKPLGEGSFSICRKCVHKKSN-QAFAVKI--ISKRMEANTQKEITALKLCEG 64

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H NI      +          + VM
Sbjct: 65  HPNIVKLHEVF----HDQLHTFLVM 85

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 18/110 (16%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQ 96
             +YE+   I  G    +Y ALD     + V +K      + E       E + L ++  
Sbjct: 79  AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV- 137

Query: 97  HSNIP---DFFGAYMKKHQTHSEIWFVMQ----------REAEMPPPRAL 133
           H +I    + F  +  +H      + VM+          +  ++P   A+
Sbjct: 138 HPSIVQIFN-FVEHTDRHGDPV-GYIVMEYVGGQSLKRSKGQKLPVAEAI 185

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G  + +G  IG G   ++    +     + V+IK++ +       +  EYR  + L    
Sbjct: 8   GPNFRVGKKIGCGNFGELRLGKNLYTN-EYVAIKLEPMKSR-APQLHLEYRFYKQLGSGD 65

Query: 99  NIPDFFG 105
            IP  + 
Sbjct: 66  GIPQVYY 72

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 20/131 (15%)

Query: 6   HELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNG 65
           H        RE       A+ P           G+ Y     +GSG   +V    +    
Sbjct: 2   HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61

Query: 66  NKKVSIKV--------------QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH 111
             + +IKV               K   +F ++I  E  +L+ L  H NI   F  +    
Sbjct: 62  -SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVF---- 115

Query: 112 QTHSEIWFVMQ 122
           +     + V +
Sbjct: 116 EDKKYFYLVTE 126

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNG--------NKKVSIKVQKINPEFIDDIKEEYRML 91
           D Y +   +GSG C +V  A + +          +K+          +   +++ E  +L
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69

Query: 92  RDLSQHSNIPDFFGAY 107
           + L+ H  I      +
Sbjct: 70  KKLN-HPCIIKIKNFF 84

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEF---IDDIKEEYRMLRD 93
           D YEL  VIG G  + V   ++ + G +   K+ + V K         +D+K E  +   
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKI-VDVAKFTSSPGLSTEDLKREASICHM 82

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           L  H +I +    Y     +   ++ V 
Sbjct: 83  LK-HPHIVELLETY----SSDGMLYMVF 105

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 9/83 (10%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQHSN 99
                +      ++++      GN  + +KV   +  +     D  EE   LR  S H N
Sbjct: 13  NFLTKLNENHSGELWKG--RWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPN 68

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           +    GA       H     +  
Sbjct: 69  VLPVLGACQSPPAPH--PTLITH 89

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 34  NLQDCGDRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKINPEFIDDIKEEYR 89
             Q       + +++G G  A VYEA      +    +K  +KVQK  P    +     +
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK--PANPWEFYIGTQ 116

Query: 90  MLRDLSQ--HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           ++  L          F+ A+       +    V +
Sbjct: 117 LMERLKPSMQHMFMKFYSAH----LFQNGSVLVGE 147

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G+++ LG  IGSG   ++Y   + Q   ++V+IK++ +  +    +  E ++ R L   +
Sbjct: 6   GNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLENVKTKH-PQLLYESKIYRILQGGT 63

Query: 99  NIPDFFG 105
            IP+   
Sbjct: 64  GIPNVRW 70

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G  Y++G  IG G    ++E  +  N  ++V+IK +    +    +++EYR  + L+  +
Sbjct: 9   GVHYKVGRRIGEGSFGVIFEGTNLLNN-QQVAIKFEPRRSD-APQLRDEYRTYKLLAGCT 66

Query: 99  NIPDFF 104
            IP+ +
Sbjct: 67  GIPNVY 72

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 1   MSKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEAL 60
           M    H  +      E            ++ LD+++  G+++ LG  IGSG    +Y A 
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMPFPEGKV-LDDME--GNQWVLGKKIGSGGFGLIYLAF 57

Query: 61  DTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH 111
            T     K +  V K+  +    +  E +  + +++   I  +       +
Sbjct: 58  PTNKPE-KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY 107

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 10/86 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
             +     IGSG    V++ +   +G     K+   K          +   E      L 
Sbjct: 11  TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVLG 68

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           QHS++  +F A+ +       +    
Sbjct: 69  QHSHVVRYFSAWAEDDH----MLIQN 90

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 40  DRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKV-QKINPEFIDDIKEEYRMLRDLSQH 97
           D Y+L   V+G G  A V   ++     ++ ++K+ +K        +  E  ML     H
Sbjct: 12  DVYQLQEDVLGEGAHARVQTCINLITS-QEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            N+ +    +    +     + V 
Sbjct: 71  RNVLELIEFF----EEEDRFYLVF 90

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 8/83 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
           D YE+   IG G  +     +       + ++K+   +     D  EE  +L    QH N
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATN-MEFAVKIIDKSKR---DPTEEIEILLRYGQHPN 77

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           I      Y         ++ V +
Sbjct: 78  IITLKDVY----DDGKYVYVVTE 96

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
           D      V+G G+   V +  + +   +K ++K+  +        + E  +    SQ  +
Sbjct: 18  DYKVTSQVLGLGINGKVLQIFNKRTQ-EKFALKM--LQD--CPKARREVELHWRASQCPH 72

Query: 100 IPDFFGAYMKKHQTHSEIWFVM 121
           I      Y   +     +  VM
Sbjct: 73  IVRIVDVYENLYAGRKCLLIVM 94

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPD 102
           E+  V+G G    V +A       K V+IK  + +         E R L  +  H NI  
Sbjct: 11  EVEEVVGRGAFGVVCKA--KWRA-KDVAIKQIE-SESERKAFIVELRQLSRV-NHPNIVK 65

Query: 103 FFGAYMKK 110
            +GA +  
Sbjct: 66  LYGACLNP 73

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 20  PPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQK 75
           P P+      L  D   +    + +   IG G  ++VY A    +G     KKV I    
Sbjct: 12  PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF-DL 70

Query: 76  INPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           ++ +   D  +E  +L+ L  H N+  ++ ++++ +    E+  V+
Sbjct: 71  MDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDN----ELNIVL 111

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
             ++  ++ +               +     DRYE+ ++IG+G    V EA D     + 
Sbjct: 22  GSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEK-RV 80

Query: 69  VSIKVQKINPEFIDDIKEEYRMLRDLS-----QHSNI 100
           V+IK  KI   F +D+ +  R+LR+++      H ++
Sbjct: 81  VAIK--KILRVF-EDLIDCKRILREIAILNRLNHDHV 114

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLS 95
           G  Y +   IGSG  + V++ L+ +   +  +IK    ++ + + +D  + E   L  L 
Sbjct: 8   GRIYSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65

Query: 96  QHS-NIPDFFGAYMKKHQTHSEIWFVM 121
           QHS  I   +        T   I+ VM
Sbjct: 66  QHSDKIIRLYDYE----ITDQYIYMVM 88

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 13  RKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK 72
           +K             D+ ++ +      +  +G  IGSG    VY+     +G   V++K
Sbjct: 2   KKGHHHHHHGSRDAADDWEIPD-----GQITVGQRIGSGSFGTVYKG--KWHG--DVAVK 52

Query: 73  V---QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK 109
           +       P+ +   K E  +LR   +H NI  F G    
Sbjct: 53  MLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA 91

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 6/66 (9%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI----NPEFIDDIKEEYRMLRDL 94
            DRYELG ++G G  ++V+ A D ++ ++ V++KV +     +P F    + E +    L
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRD-HRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69

Query: 95  SQHSNI 100
           + H  I
Sbjct: 70  N-HPAI 74

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 11/92 (11%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNK------KVSIKVQKINPEFIDDIKEEYR 89
           ++  D Y+ G  +GSG  A V +  +   G +      K             +DI+ E  
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +L+++  H N+      Y    +  +++  ++
Sbjct: 67  ILKEIQ-HPNVITLHEVY----ENKTDVILIL 93

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
                   A  PP + +    +D         RY  G  +G G  A  +E  D     + 
Sbjct: 14  GVAAPGAPAAAPPAKEIPEVLVD----PRSRRRYVRGRFLGKGGFAKCFEISDADTK-EV 68

Query: 69  VSIKV----QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
            + K+      + P   + +  E  + R L  H ++  F G +    + +  ++ V+
Sbjct: 69  FAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFF----EDNDFVFVVL 120

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 14/59 (23%), Positives = 30/59 (50%)

Query: 39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
           +RYE+   +G G    V E LD   G  +V++K+ +   ++ +  + E  +L+ + + 
Sbjct: 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 76

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 17/89 (19%)

Query: 29  ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--------QKINPEF 80
            L  + +       E    IG G    V++    ++    V+IK         +    E 
Sbjct: 15  TLADNEI-------EYEKQIGKGGFGLVHKGRLVKDK-SVVAIKSLILGDSEGETEMIEK 66

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMK 109
             + + E  ++ +L  H NI   +G    
Sbjct: 67  FQEFQREVFIMSNL-NHPNIVKLYGLMHN 94

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNK------KVSIKVQKINPEFIDDIKEEYR 89
           Q   D Y++G  +GSG  A V +  +   G +      K             ++I+ E  
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +LR +  H N+      Y    +  +++  ++
Sbjct: 68  ILRQVL-HHNVITLHDVY----ENRTDVVLIL 94

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK-VQKINPEFIDDIKEEYRMLRDLSQH 97
             R  +  V+  G  A VYEA D  +G ++ ++K +     E    I +E   ++ LS H
Sbjct: 27  ELRLRVRRVLAEGGFAFVYEAQDVGSG-REYALKRLLSNEEEKNRAIIQEVCFMKKLSGH 85

Query: 98  SNIPDFFGAYMKKHQ---THSEIWFVM 121
            NI  F  A     +   T    + ++
Sbjct: 86  PNIVQFCSAASIGKEESDTGQAEFLLL 112

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK------KVSIKVQKINPEFIDDIKEEYRMLRD 93
           D YE+G  +GSG  A V +      G +      K             ++I+ E  +LR+
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +  H NI      +    +  +++  ++
Sbjct: 65  IR-HPNIITLHDIF----ENKTDVVLIL 87

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 15/59 (25%), Positives = 29/59 (49%)

Query: 39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
            RYE+   +G G    V E +D + G + V++K+ K    + +  + E ++L  L+  
Sbjct: 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT 71

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI----NPEFIDDIKEEYRMLRDL 94
            +RY++   +G G  + VY A DT   N KV+IK   I      E +   + E      L
Sbjct: 10  NERYKIVDKLGGGGMSTVYLAEDTIL-NIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68

Query: 95  SQHSNI 100
           S H NI
Sbjct: 69  S-HQNI 73

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 12/108 (11%)

Query: 6   HELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNG 65
           H ++         +    A+  D++D+           +   IG+G    V+ A    +G
Sbjct: 8   HPMSDYDIPTTENLYFQGAMDGDDMDIPW-----CDLNIKEKIGAGSFGTVHRA--EWHG 60

Query: 66  NKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK 110
              V++K+   Q  + E +++   E  +++ L +H NI  F GA  + 
Sbjct: 61  -SDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQP 106

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 19/109 (17%)

Query: 17  AEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--- 73
           A+  P   + P             RY  G  +G G  A  +E  D     +  + K+   
Sbjct: 1   AKEIPEVLVDPR---------SRRRYVRGRFLGKGGFAKCFEISDADTK-EVFAGKIVPK 50

Query: 74  -QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
              + P   + +  E  + R L  H ++  F G +    + +  ++ V+
Sbjct: 51  SLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFF----EDNDFVFVVL 94

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYR---MLR 92
           D G RY     IG G    V  A D  N   +V+IK  KI+P E     +   R   +L 
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNK-VRVAIK--KISPFEHQTYCQRTLREIKILL 80

Query: 93  DLSQHSNI 100
              +H NI
Sbjct: 81  RF-RHENI 87

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 8/85 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
             ++    +G G   +V++    ++G     K         P+       E      + Q
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQ 115

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H        A+    +    ++   
Sbjct: 116 HPCCVRLEQAW----EEGGILYLQT 136

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNK------KVSIKVQKINPEFIDDIKEEYR 89
           Q   D Y++G  +GSG  A V +  +   G +      K             ++I+ E  
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +LR +  H NI      Y    +  +++  ++
Sbjct: 68  ILRQVL-HPNIITLHDVY----ENRTDVVLIL 94

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQHSN 99
           E+G +IG G    VY      +G  +V+I++   ++ N + +   K E    R   +H N
Sbjct: 36  EIGELIGKGRFGQVYHG--RWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHEN 90

Query: 100 IPDFFGAYMKK 110
           +  F GA M  
Sbjct: 91  VVLFMGACMSP 101

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 2   SKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDC----GDRYELGYVIGSGVCADVY 57
                E A  K +R+    P      D+    +  +C    G  Y +   IGSG  + V+
Sbjct: 14  GSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVF 73

Query: 58  EALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQHS-NIPDFFGAYMKKHQT 113
           + L+ +   +  +IK    ++ + + +D  + E   L  L QHS  I   +        T
Sbjct: 74  QVLNEK--KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE----IT 127

Query: 114 HSEIWFVM 121
              I+ VM
Sbjct: 128 DQYIYMVM 135

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLS 95
           G  Y +   IGSG  + V++ L+ +   +  +IK    ++ + + +D  + E   L  L 
Sbjct: 27  GRIYSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84

Query: 96  QHS-NIPDFFGAYMKKHQTHSEIWFVM 121
           QHS  I   +        T   I+ VM
Sbjct: 85  QHSDKIIRLYDYE----ITDQYIYMVM 107

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 14/121 (11%)

Query: 1   MSKTFHELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEAL 60
            S     L  E    E  +   + LKP + +    ++          +G G   +V+   
Sbjct: 23  GSAKLQRLGPETEDNEGVLLTEK-LKPVDYEY---REEVHWMTHQPRVGRGSFGEVHRMK 78

Query: 61  DTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV 120
           D Q G  + ++K  ++         EE      L     I   +GA  +       +   
Sbjct: 79  DKQTG-FQCAVKKVRLE----VFRVEELVACAGL-SSPRIVPLYGAVREGP----WVNIF 128

Query: 121 M 121
           M
Sbjct: 129 M 129

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKV--SIKVQKINPEFIDDIKEEYRMLRDLSQH 97
           + YE+ Y IG+G      +     +G   V   +    +       +  E  +LR+L  H
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 64

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI  ++   +   +T++ ++ VM
Sbjct: 65  PNIVRYYDRII--DRTNTTLYIVM 86

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPD 102
            L   IG G   +V+     +   ++V++K+   + E     +E       + +H NI  
Sbjct: 45  VLQESIGKGRFGEVWRG---KWRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG 100

Query: 103 FFGAYMKKHQTHSEIWFVMQ 122
           F  A  K + T +++W V  
Sbjct: 101 FIAADNKDNGTWTQLWLVSD 120

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 12/86 (13%)

Query: 40  DRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFID---DIKEEYRMLRDLS 95
           D Y+L   V+G GV   V E    + G +K ++K+       +      ++E       S
Sbjct: 28  DDYQLSKQVLGLGVNGKVLECFHRRTG-QKCALKL-------LYDSPKARQEVDHHWQAS 79

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
              +I      Y   H     +  +M
Sbjct: 80  GGPHIVCILDVYENMHHGKRCLLIIM 105

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQH 97
             +E+   +G+G    V   +    G ++V+IK   Q+++P+  +    E ++++ L  H
Sbjct: 14  GPWEMKERLGTGGFGYVLRWIHQDTG-EQVAIKQCRQELSPKNRERWCLEIQIMKKL-NH 71

Query: 98  SNIPDFFGAY--MKKHQTHSEIWFVM 121
            N+         ++K   +      M
Sbjct: 72  PNVVSAREVPDGLQKLAPNDLPLLAM 97

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
            DRYE+  +IG G    V +A D     + V+IK+ K    F++  + E R+L  +++H
Sbjct: 53  MDRYEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 7/114 (6%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
              +         P+      L +       D      V+G G+   V +  + +   +K
Sbjct: 31  PPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQ-EK 89

Query: 69  VSIKV-QKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
            ++K+ Q          + E  +    SQ  +I      Y   +     +  VM
Sbjct: 90  FALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 6/81 (7%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKE-EYRMLRDLSQHSNIP 101
           ++   IG G   +V+     +   +KV++KV     E     +E E      + +H NI 
Sbjct: 40  QMVKQIGKGRYGEVWMG---KWRGEKVAVKVFF-TTEEASWFRETEIYQTVLM-RHENIL 94

Query: 102 DFFGAYMKKHQTHSEIWFVMQ 122
            F  A +K   + ++++ +  
Sbjct: 95  GFIAADIKGTGSWTQLYLITD 115

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 13/100 (13%), Positives = 27/100 (27%), Gaps = 8/100 (8%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK- 67
           A  +       P       D L    L     + +L   +  G  + V+   D +     
Sbjct: 35  AMVEAVTATVWPQNAETTVDSL----LSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDF 90

Query: 68  --KVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFG 105
             KV     + +   ++ + E       L    +  +   
Sbjct: 91  ALKVFTMGAENSRSELERLHEATFAAARL-LGESPEEARD 129

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFID--DIKEEYR---ML 91
               +YEL   +G G    V++++D + G + V++K  KI   F +  D +  +R   +L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTG-EVVAVK--KIFDAFQNSTDAQRTFREIMIL 62

Query: 92  RDLSQHSNI 100
            +LS H NI
Sbjct: 63  TELSGHENI 71

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 19/91 (20%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKIN--PEFIDDIKEEYRMLRDLS 95
           +Y +G ++G G    V E LD++    + ++K+   +K+   P    ++K+E ++LR L 
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETL-CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64

Query: 96  QHSNIPDFFGAYMKKHQ-----THSEIWFVM 121
            H N+       ++           +++ VM
Sbjct: 65  -HKNV-------IQLVDVLYNEEKQKMYMVM 87

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
             RYE+  VIG G    V +A D +  ++ V++K+ +    F     EE R+L  L + 
Sbjct: 96  AYRYEVLKVIGKGSFGQVVKAYDHKV-HQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ 153

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI--NPEFIDDIKEEYRMLRDLSQH 97
             +E    +G G    V+EA +  +     +IK  ++       + +  E + L  L +H
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDD-CNYAIKRIRLPNRELAREKVMREVKALAKL-EH 62

Query: 98  SNIPDFFGAYMKKHQTHSEI 117
             I  +F A+++K+ T    
Sbjct: 63  PGIVRYFNAWLEKNTTEKLQ 82

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           + ++L   +G G   +V  A++     + V++K+   ++   +  ++IK+E  + + L+ 
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRA-VDCPENIKKEICINKMLN- 63

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H N+  F+G      +  +  +  +
Sbjct: 64  HENVVKFYGHR----REGNIQYLFL 84

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 14/112 (12%)

Query: 7   ELAQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNG- 65
           +L  E    ++      AL    +  D     G +++L           +YEA  T    
Sbjct: 12  DLGTENLYFQSMTTSLEALPTGTVLTDKS---GRQWKLKSFQTRDNQGILYEAAPTSTLT 68

Query: 66  ------NKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH 111
                  +K S+K+   +      +  E    +  ++   +  +   Y    
Sbjct: 69  CDSGPQKQKFSLKLDAKDG----RLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK 68
           AQ  R+  A+          E+ + ++      +++G  IG G    +Y A    + +  
Sbjct: 7   AQAGRQSSAKRHLAEQFAVGEI-ITDM--AAAAWKVGLPIGQGGFGCIYLADMNSSESVG 63

Query: 69  VSIKVQ-KINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH 111
                  K+ P     +  E +  +  ++   I  +      K+
Sbjct: 64  SDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKY 107

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 43  ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPD 102
            L   +G G   +V+         + V++K+   + +     +E       + +H NI  
Sbjct: 11  TLLECVGKGRYGEVWRG---SWQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG 66

Query: 103 FFGAYMKKHQTHSEIWFVM 121
           F  + M    + +++W + 
Sbjct: 67  FIASDMTSRHSSTQLWLIT 85

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRMLRDL 94
           +    Y     +GSG    V  A+D ++G +KV+IK  K++  F      K  YR L  L
Sbjct: 21  ELPKTYVSPTHVGSGAYGSVCSAIDKRSG-EKVAIK--KLSRPFQSEIFAKRAYRELLLL 77

Query: 95  S--QHSNI 100
              QH N+
Sbjct: 78  KHMQHENV 85

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 16/114 (14%)

Query: 17  AEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--- 73
           A   PP+A++ + L     +    +Y     +GSG    V+ A+D +   K+V +K    
Sbjct: 2   ALEEPPKAVELEGLAACEGEYSQ-KYSTMSPLGSGAFGFVWTAVDKEKN-KEVVVKFIKK 59

Query: 74  QKINPEFIDD------IKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +K+  +   +      +  E  +L  + +H+NI      +    +       VM
Sbjct: 60  EKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIF----ENQGFFQLVM 108

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           + +E+G  +G G   +VY A + Q+    +++KV    Q         ++ E  +   L 
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSK-FILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +H NI   +G Y       + ++ ++
Sbjct: 67  RHPNILRLYG-YF---HDATRVYLIL 88

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 9   AQEKRKREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK- 67
           A +     +     +  + +      L +       G V+G        EA D + G   
Sbjct: 46  AADSLVSTSLWNTGQPFRVESE----LGERPRTLVRGTVLGQEDPYAYLEATDQETGESF 101

Query: 68  --KVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPD 102
              V    ++     I  +KEE   LR L    N   
Sbjct: 102 EVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 15/87 (17%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQH 97
            Y L   IG G  A V  A     G ++V+IK+    ++NP  +  +  E R+++ L  H
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTG-REVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NH 73

Query: 98  SNIPDFFGAYMKKHQ---THSEIWFVM 121
            NI       +K  +   T   ++ +M
Sbjct: 74  PNI-------VKLFEVIETEKTLYLIM 93

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
           + + +   +G G    V       N  K  ++KV +   ++    K E  +L+ +   
Sbjct: 34 NNAFLVIRKMGDGTFGRVLLCQHIDN-KKYYAVKVVRNIKKYTRSAKIEADILKKIQND 91

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           + ++L   +G G   +V  A++     + V++K+   ++   +  ++IK+E  + + L+ 
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRA-VDCPENIKKEICINKMLN- 63

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H N+  F+G      +  +  +  +
Sbjct: 64  HENVVKFYGHR----REGNIQYLFL 84

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRMLRDL 94
           +    Y     +GSG    V  A+D + G  KV+IK  K+   F      K  YR LR L
Sbjct: 22  EVRAVYRDLQPVGSGAYGAVCSAVDGRTG-AKVAIK--KLYRPFQSELFAKRAYRELRLL 78

Query: 95  S--QHSNI 100
              +H N+
Sbjct: 79  KHMRHENV 86

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 33  DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRM 90
           D+      RY+    IGSG    V  A D     + V+IK  K++  F      K  YR 
Sbjct: 18  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIK--KLSRPFQNQTHAKRAYRE 74

Query: 91  LRDLS--QHSNI 100
           L  +    H NI
Sbjct: 75  LVLMKCVNHKNI 86

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           + +++G ++G G  A VY A     G  +V+IK+           +  ++ E ++   L 
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTG-LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL- 68

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +H +I + +  Y    +  + ++ V+
Sbjct: 69  KHPSILELYN-YF---EDSNYVYLVL 90

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQH 97
             + L  ++G G  A+V+     + G    +IKV         +D    E+ +L+ L+ H
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRPVDVQMREFEVLKKLN-H 66

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI   F     +  T      +M
Sbjct: 67  KNIVKLFAIE--EETTTRHKVLIM 88

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 33  DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDI--KEEYRM 90
           D+      RY+    IGSG    V  A D     + V+IK  K++  F +    K  YR 
Sbjct: 55  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIK--KLSRPFQNQTHAKRAYRE 111

Query: 91  LRDLS--QHSNI---PDFFGAYMKKHQTHSEIWFVM 121
           L  +    H NI    + F    K  +   +++ VM
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQ-KTLEEFQDVYLVM 146

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 16/88 (18%)

Query: 41  RYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKI-NPEFIDDIKEEYRMLRDLSQ 96
            Y LG  +G G    V        G  KV++K+   QKI + + +  IK E + L+   +
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTG-HKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-R 69

Query: 97  HSNIPDFFGAYMKKHQ---THSEIWFVM 121
           H +I       +K +Q   T ++ + VM
Sbjct: 70  HPHI-------IKLYQVISTPTDFFMVM 90

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 16/86 (18%)

Query: 29  ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----EFIDD 83
           E+D   L        L  +IG G    VY A        +V++K  + +P     + I++
Sbjct: 3   EIDFAEL-------TLEEIIGIGGFGKVYRAF---WIGDEVAVKAARHDPDEDISQTIEN 52

Query: 84  IKEEYRMLRDLSQHSNIPDFFGAYMK 109
           +++E ++   L +H NI    G  +K
Sbjct: 53  VRQEAKLFAML-KHPNIIALRGVCLK 77

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           D +++G  +G G   +VY A + QN    +++KV    Q         ++ E  +   L 
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNK-FIMALKVLFKSQLEKEGVEHQLRREIEIQSHL- 71

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +H NI   +  Y         I+ ++
Sbjct: 72  RHPNILRMYN-YF---HDRKRIYLML 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.7 bits (89), Expect = 7e-04
 Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 43/151 (28%)

Query: 21  PPRALK--PDELDL--DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI 76
           P   L   P  L +  ++++D    +            D ++ ++       +   +  +
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATW------------DNWKHVNCDKLTTIIESSLNVL 366

Query: 77  NPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEM--------- 127
            P    + ++ +  L      ++IP             S IWF + +   M         
Sbjct: 367 EP---AEYRKMFDRLSVFPPSAHIPT---------ILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 128 ------PPPRALKPDELDLDNLQDCGDRYEL 152
                 P    +    + L+      + Y L
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYAL 445

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQH 97
             + L  ++G G  A+V+     + G    +IKV         +D    E+ +L+ L+ H
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRPVDVQMREFEVLKKLN-H 66

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
            NI   F     +  T      +M
Sbjct: 67  KNIVKLFAIE--EETTTRHKVLIM 88

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYR---MLRD 93
           D G RY     +G G    V+ A+D     K+V+IK  KI       +K   R   ++R 
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCD-KRVAIK--KIVLTDPQSVKHALREIKIIRR 64

Query: 94  LSQHSNI 100
           L  H NI
Sbjct: 65  L-DHDNI 70

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDI--KEEYR---ML 91
              D Y + ++IG G    VY A D     K V+IK  K+N  F D I  K   R   +L
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTE-KNVAIK--KVNRMFEDLIDCKRILREITIL 79

Query: 92  RDLSQHSNI 100
             L +   I
Sbjct: 80  NRL-KSDYI 87

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 29  ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDI 84
           +L  +NL       +L  V   G    V++A   Q  N+ V++K+     K + +   ++
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGCVWKA---QLLNEYVAVKIFPIQDKQSWQNEYEV 69

Query: 85  KEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
                M     +H NI  F GA  +      ++W + 
Sbjct: 70  YSLPGM-----KHENILQFIGAEKRGTSVDVDLWLIT 101

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 21/97 (21%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDD----IKEEY---R 89
             Y LG ++G G    V+      +   +V+IKV    ++              E     
Sbjct: 31  AEYRLGPLLGKGGFGTVFAGHRLTDR-LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQ---THSEIWFVMQR 123
            +     H  +       ++      T      V++R
Sbjct: 90  KVGAGGGHPGV-------IRLLDWFETQEGFMLVLER 119

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	176
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.93
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.92
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.89
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.89
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.88
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.88
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.88
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.87
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.87
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.87
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.87
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.87
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.87
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.87
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.87
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.87
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.87
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.87
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.87
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.86
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.86
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.86
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.86
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.86
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.86
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.86
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.86
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.86
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.86
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.86
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.86
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.86
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.86
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.85
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.85
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.85
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.85
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.85
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.85
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.85
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.85
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.85
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.85
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.85
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.85
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.85
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.85
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.84
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.84
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.84
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.84
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.84
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.84
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.84
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.84
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.84
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.84
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.84
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.84
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.84
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.84
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.84
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.84
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.84
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.83
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.83
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.83
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.83
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.83
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.83
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.83
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.83
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.83
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.83
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.83
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.83
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.83
3bhy_A	283	Death-associated protein kinase 3; death associate	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.83
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.83
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.83
3niz_A	311	Rhodanese family protein; structural genomics, str	99.83
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.83
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.83
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.83
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.82
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.82
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.82
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.82
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.82
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.82
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.82
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.82
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.82
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.82
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.82
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.82
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.82
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.82
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.82
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.82
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.82
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.82
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.82
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.82
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.82
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.82
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.81
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.81
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.81
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.81
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.81
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.81
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.81
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.81
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.81
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.81
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.81
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.81
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.81
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.81
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.81
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.8
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.8
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.8
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.8
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.8
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.8
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.8
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.8
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.8
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.8
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.8
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.8
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.8
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.8
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.8
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.79
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.79
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.79
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.79
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.79
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.79
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.79
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.79
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.79
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.79
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.79
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.79
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.79
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.79
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.78
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.78
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.78
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.78
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.78
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.78
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.78
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.77
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.77
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.77
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.77
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.77
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.77
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.77
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.76
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.76
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.76
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.76
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.76
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.76
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.76
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.75
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.75
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.75
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.75
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.75
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.74
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.74
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.72
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.72
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.71
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.62
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.52
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.52
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.83
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.37
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.25
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.34
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.72
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.61
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.52
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.08
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.78
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.5
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.91
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.86
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	88.64
3ats_A	357	Putative uncharacterized protein; hypothetical pro	87.68
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	86.65
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	86.32
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	85.81
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	81.04

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=7.4e-29  Score=189.65  Aligned_cols=126  Identities=14%  Similarity=0.293  Sum_probs=110.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++++.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.|.+    .+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~-~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~----~~  105 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELA-TSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD----DE  105 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SS
T ss_pred             cccEEEEEEecccCeEEEEEEECC-CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe----CC
Confidence            469999999999999999999988 89999999998642    2456789999999999 99999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||++||+|.++|+ ....+.....  ..+++.+|+|+|.+||   |||||||+||.
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~I---iHRDlKPeNIL  164 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI---IHRDLKPENIL  164 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCCHHHeE
Confidence            9999999999999999997 3445544433  3388889999999998   99999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=2.8e-28  Score=189.15  Aligned_cols=126  Identities=16%  Similarity=0.203  Sum_probs=103.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++++.||+|+||.||+|.+.. ++..||+|.+...   ......+.+|+.+++.+ +||||+++++.+.+    .+.
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~----~~~   97 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTE-DGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEE----NGS   97 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETT-TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----TTE
T ss_pred             cceEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEE----CCE
Confidence            579999999999999999999988 8899999999764   34567899999999999 99999999999999    899


Q ss_pred             EEEEEecCCCCChhhhcC-C--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-P--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||||||+||+|.++|. .  ...+....  ...+++.+|+|+|.+||   |||||||+||.
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~I---iHRDlKp~NIL  157 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI---LHRDIKSQNIF  157 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---EETTCCGGGEE
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCCHHHEE
Confidence            999999999999999996 2  23343332  34488889999999999   99999999984

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=1.9e-28  Score=194.24  Aligned_cols=130  Identities=18%  Similarity=0.244  Sum_probs=112.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++...|+++++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+|+.+ +||||++++++|.+    .
T Consensus       147 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~----~  220 (423)
T 4fie_A          147 GDPRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLV----G  220 (423)
T ss_dssp             SCGGGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEE----T
T ss_pred             CChhHhcEeeeEeccCcCcEEEEEEECC-CCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEE----C
Confidence            4556789999999999999999999988 89999999998653 2345688999999999 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|||||||+||+|.++++.........  .+.+++.+|+|||.+||   |||||||+||.
T Consensus       221 ~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~I---iHRDiKp~NIL  279 (423)
T 4fie_A          221 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSIL  279 (423)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSTTTEE
T ss_pred             CEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCe---ecccCCHHHEE
Confidence            99999999999999999998444554443  23388889999999998   99999999984

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=8.5e-29  Score=191.84  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=111.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++...|+++++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+ +||||++++++|.+    .
T Consensus        70 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~----~  143 (346)
T 4fih_A           70 GDPRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLV----G  143 (346)
T ss_dssp             SCGGGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEE----T
T ss_pred             CChhHhcEEeEEeecCcCeEEEEEEECC-CCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----C
Confidence            3455679999999999999999999988 89999999997643 2345688999999999 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|||||||+||+|.+++...........  ..+++.+|+|+|.+||   |||||||+||.
T Consensus       144 ~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~I---iHRDlKp~NIL  202 (346)
T 4fih_A          144 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSIL  202 (346)
T ss_dssp             TEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCCHHHEE
Confidence            999999999999999999975445544432  3388889999999998   99999999984

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=9.1e-27  Score=176.82  Aligned_cols=128  Identities=22%  Similarity=0.228  Sum_probs=106.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      |++.++||+|+||.||+|.+.. ++..||+|.+...   ......+.+|+.+++.+ +||||++++++|.........+|
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~  105 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECC-CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEE
Confidence            4778899999999999999988 8899999998753   34566799999999999 99999999999876322246699


Q ss_pred             EEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                      |||||++||+|.++|. ....+....  ...+++.+|+|+|.++  |   |||||||+||.
T Consensus       106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~I---iHRDlKp~NIL  163 (290)
T 3fpq_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPI---IHRDLKCDNIF  163 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCC---CCCCCCGGGEE
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCE---EecccChhhee
Confidence            9999999999999997 344444443  2338888999999988  7   99999999983

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=6e-27  Score=176.52  Aligned_cols=125  Identities=19%  Similarity=0.251  Sum_probs=104.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++.+.||+|+||.||+|.+.. ++..||+|.++...    .....+.+|+.+++.+ +||||+++++++.+    .+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~----~~   86 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKS----KD   86 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT-TCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----SS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEE----CC
Confidence            469999999999999999999988 88999999997642    2456789999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+ +|+|.++|. ....+......  .+.+.+|+|+|++||   +||||||+||.
T Consensus        87 ~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~I---iHRDiKP~NIL  144 (275)
T 3hyh_A           87 EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI---VHRDLKPENLL  144 (275)
T ss_dssp             EEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCTTTEE
T ss_pred             EEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCChHHeE
Confidence            999999999 689999987 45555544333  388889999999999   99999999984

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.94  E-value=5.3e-27  Score=181.18  Aligned_cols=124  Identities=16%  Similarity=0.078  Sum_probs=106.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ....|.+.++||+|+||.||+|.+.. ++..||+|.++....    ..+|+.+++.+ +||||+++++.+.+    .+.+
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~-~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~----~~~~  125 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQ-TGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVRE----GPWV  125 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEE----TTEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECC-CCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEE----CCEE
Confidence            34568999999999999999999988 899999999986532    24699999999 99999999999999    8899


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||||++||+|.++|+ ...++.....  ..+++.+|+|+|.++|   |||||||+||.
T Consensus       126 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I---iHRDlKp~NIL  182 (336)
T 4g3f_A          126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI---LHGDVKADNVL  182 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECSCCCGGGEE
T ss_pred             EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecccCHHHEE
Confidence            99999999999999997 3445544433  3388889999999998   99999999984

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=1.3e-26  Score=176.86  Aligned_cols=129  Identities=20%  Similarity=0.232  Sum_probs=104.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..++|.+.+.||+|+||.||+|.+..    ..+..||+|.++... ...+.+.+|+.+++.+ +||||+++++++..   
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~---   86 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVE---   86 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS---
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEee---
Confidence            34579999999999999999998742    035689999997653 4567899999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC--------------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP--------------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~--------------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.++|||||+++|+|.++|..              ..++....  ...++..+|+|+|..+|   |||||||+||.
T Consensus        87 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i---iHRDlKp~NIL  160 (299)
T 4asz_A           87 -GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNCL  160 (299)
T ss_dssp             -SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCccCHhhEE
Confidence             7889999999999999999952              12333322  23377888999999998   99999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.94  E-value=3.3e-26  Score=174.57  Aligned_cols=129  Identities=16%  Similarity=0.217  Sum_probs=102.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC------
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ------  112 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~------  112 (176)
                      +|++++.||+|+||.||+|.+.. ++..||+|.++..  ......+.+|+.+++.+ +||||+++++.+...+.      
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKV-DDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETT-TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC-------
T ss_pred             hCEEeeEEecCCCeEEEEEEECC-CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccc
Confidence            58999999999999999999988 8899999998754  33456789999999999 99999999999976321      


Q ss_pred             --CcceEEEEEecCCCCChhhhcCCC-CC---Chhh--HhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 --THSEIWFVMQREAEMPPPRALKPD-EL---DLDN--LQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 --~~~~~~lv~e~~~~g~L~~~l~~~-~~---~~~~--~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....+|++|||+++|+|.+++... ..   +...  ....+++.+|+|+|++||   |||||||+||.
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~I---iHRDlKp~NIL  150 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGL---MHRDLKPSNIF  150 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcC---ccccCcHHHeE
Confidence              123489999999999999999622 11   1111  133478889999999999   99999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=6.9e-26  Score=174.88  Aligned_cols=129  Identities=23%  Similarity=0.271  Sum_probs=105.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..+.|.+.++||+|+||.||+|.+..    .++..||+|.++... ...+.|.+|+.+++.+ +||||+++++++..   
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~---  114 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTE---  114 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS---
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE---
Confidence            34579999999999999999998642    035789999997653 4567899999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+||||||+++|+|.++|...                .+.....  ...++..+|+|+|..+|   |||||||+||.
T Consensus       115 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i---iHRDLKp~NIL  190 (329)
T 4aoj_A          115 -GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCL  190 (329)
T ss_dssp             -SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCe---ecccccHhhEE
Confidence             78899999999999999998521                1232222  23377888999999998   99999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.93  E-value=7.3e-26  Score=173.05  Aligned_cols=129  Identities=21%  Similarity=0.268  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ..|....+.+.+.++||+|+||.||+|.+..    .+|+|.++..   ......+.+|+.+++.+ +||||+++++++..
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~----~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~  103 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG----DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK  103 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS----EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC----cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC
Confidence            3466667789999999999999999998643    5899998753   34567899999999999 99999999998754


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                           +.++||||||++|+|.++|.  ....+....  ...++..+|+|+|..+|   |||||||+||.
T Consensus       104 -----~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~I---iHRDlKp~NIL  164 (307)
T 3omv_A          104 -----DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI---IHRDMKSNNIF  164 (307)
T ss_dssp             -----SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC---BCSCCCSSSEE
T ss_pred             -----CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCccCHHHEE
Confidence                 56899999999999999995  334444333  23377889999999998   99999999984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=3.9e-27  Score=179.84  Aligned_cols=127  Identities=17%  Similarity=0.220  Sum_probs=100.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecC--CCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQ--NGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ++|++++.||+|+||.||+|.+..  .++..||+|.++...   .....+.+|+.+++.+ +||||+++++.+.+    .
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~----~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQT----E   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEE----T
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEE----C
Confidence            469999999999999999998742  146789999997532   2234578899999999 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||++||+|.++|. ....+.....  ..+++.+|+|+|.+||   |||||||+||.
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I---iHRDlKp~NIL  158 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI---IYRDLKPENIL  158 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCCGGGEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---cCCCCCHHHeE
Confidence            99999999999999999997 3444444433  3378889999999999   99999999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.93  E-value=2.1e-25  Score=176.20  Aligned_cols=132  Identities=20%  Similarity=0.230  Sum_probs=108.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--  111 (176)
                      +..++|.+++.||+|+||.||+|.+.. ++..||+|.++..   ......+.+|+.+|+.+ +||||+++++++....  
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~-t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRL-TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCT
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECC-CCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeeccccc
Confidence            345689999999999999999999988 8999999999754   23456788999999999 9999999999886532  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+.+||||||++ |+|.++|. .........  ...+++.+|+|+|.+||   |||||||+||.
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i---iHRDlKP~NIl  190 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV---IHRDLKPSNLL  190 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC---cCCCcCccccc
Confidence            12467999999996 77999987 444554443  33388889999999999   99999999984

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.93  E-value=1.4e-25  Score=171.69  Aligned_cols=129  Identities=18%  Similarity=0.162  Sum_probs=103.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ..+.+++.++||+|+||.||+|.+..    ..+..||+|.++..  ....+.|.+|+.+++.+ +||||+++++++..  
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~--  100 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTK--  100 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECS--
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEE--
Confidence            34568999999999999999998632    03568999998753  23467899999999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCC
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQN  172 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~n  172 (176)
                        .+.++|||||+++|+|.++|...                 .++....  ...++..+|+|+|..++   |||||||+|
T Consensus       101 --~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i---iHRDLK~~N  175 (308)
T 4gt4_A          101 --DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV---VHKDLATRN  175 (308)
T ss_dssp             --SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGG
T ss_pred             --CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCC---CCCCccccc
Confidence              78899999999999999998521                 1222221  23377888999999998   999999999


Q ss_pred             cc
Q psy9091         173 VT  174 (176)
Q Consensus       173 v~  174 (176)
                      |.
T Consensus       176 IL  177 (308)
T 4gt4_A          176 VL  177 (308)
T ss_dssp             EE
T ss_pred             eE
Confidence            84

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=1.6e-25  Score=171.10  Aligned_cols=131  Identities=19%  Similarity=0.148  Sum_probs=100.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      .+|.+.++||+|+||.||+|.+   ++..||+|.+............|+..+..+ +||||+++++.+...+.....+||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~---~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEE
Confidence            4589999999999999999988   468999999876543323334555566677 999999999999874322347899


Q ss_pred             EEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCC-----CccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGV-----CADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i-----~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.++|..........  ...+...+|+|+|..+.     .++|||||||+||.
T Consensus        79 V~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL  140 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred             EecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence            999999999999998444443332  22377788999998732     25599999999984

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=2.2e-25  Score=174.08  Aligned_cols=132  Identities=14%  Similarity=0.090  Sum_probs=107.6

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .+...++|++.+.||+|+||.||+|.+..+  ++..||+|.+.... ....+.+|+.++..+.+||||+++++++..   
T Consensus        16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---   91 (361)
T 4f9c_A           16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---   91 (361)
T ss_dssp             SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE---
T ss_pred             cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEE---
Confidence            345567899999999999999999987421  45789999886643 234578899999987679999999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+|+||||++||+|.+++..-..........+.+.+|+|+|.+||   |||||||+||.
T Consensus        92 -~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gI---iHRDiKPeNiL  149 (361)
T 4f9c_A           92 -NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGI---VHRDVKPSNFL  149 (361)
T ss_dssp             -TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             -CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCcCCHHHeE
Confidence             89999999999999999999542222222334488889999999999   99999999984

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.92  E-value=5.8e-25  Score=171.12  Aligned_cols=134  Identities=19%  Similarity=0.222  Sum_probs=107.0

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCC-----CeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNG-----NKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~-----~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      .|..+.++|++.+.||+|+||.||+|.+.. .     +..||+|.+...  ......+.+|+.++..+.+||||+++++.
T Consensus        58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~-~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEET-SSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccEecHHHeEEeeEEecCCCeEEEEEEEcC-CCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            456777899999999999999999998754 3     257999998764  33566799999999999555999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      |..+   .+.++||||||++|+|.++|+..                 .+.....  ...+++.+|+|+|.+++   ||||
T Consensus       137 ~~~~---~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~i---iHRD  210 (353)
T 4ase_A          137 CTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRD  210 (353)
T ss_dssp             ECCT---TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             EEec---CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCe---ecCc
Confidence            8652   46799999999999999998521                 1222222  22377889999999999   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      |||+||.
T Consensus       211 LK~~NIL  217 (353)
T 4ase_A          211 LAARNIL  217 (353)
T ss_dssp             CSGGGEE
T ss_pred             cCcccee
Confidence            9999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=1e-24  Score=179.44  Aligned_cols=126  Identities=13%  Similarity=0.154  Sum_probs=109.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ++|.+++.||+|+||.||+|.+.. ++..+|+|.+.... .....+.+|+.+|+.+ +||||+++++.|.+    ...+|
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~-tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~----~~~~~  230 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFED----DNEMV  230 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEC----SSEEE
T ss_pred             cccEEEEEEeeccCeEEEEEEECC-CCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEE----CCEEE
Confidence            579999999999999999999988 89999999997653 3566789999999999 99999999999998    89999


Q ss_pred             EEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+|||++||+|.++|..  ..+.....  ...+++.+|.|||.++|   +||||||+||.
T Consensus       231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i---iHRDlKp~Nil  287 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLDLKPENIM  287 (573)
T ss_dssp             EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCChhhcc
Confidence            99999999999999862  33333332  33388889999999998   99999999984

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=1.8e-24  Score=179.32  Aligned_cols=126  Identities=14%  Similarity=0.111  Sum_probs=103.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHH---HHHHHhccCCCCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEE---YRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e---~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ++|.+++.||+|+||.||+|.+.. ++..||+|.+....    .....+..|   +.++..+ +||||+++++.|.+   
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~-tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~---  263 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHT---  263 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEEC---
T ss_pred             HHeEEEEEEecccCeEEEEEEECC-CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEE---
Confidence            469999999999999999999998 89999999997531    112233333   5556666 89999999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+|+||||++||+|.++|. ....+....+.  .+++.+|+|+|.+||   |||||||+||.
T Consensus       264 -~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gI---iHRDLKPeNIL  324 (689)
T 3v5w_A          264 -PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV---VYRDLKPANIL  324 (689)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCSGGGEE
T ss_pred             -CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCchHHeE
Confidence             899999999999999999997 44455544433  388889999999998   99999999984

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=5.4e-23  Score=155.77  Aligned_cols=129  Identities=11%  Similarity=0.071  Sum_probs=109.2

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...++|.+.+.||+|+||.||+|.+.. .+..+|+|.+...    ......+.+|+..+..+ +|+||+++++.+..   
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~---  102 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTA-LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHT---  102 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETT-TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEE---
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecC-CCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEE---
Confidence            345679999999999999999999987 7899999999764    23456789999999998 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH-hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL-QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..|+||||++|++|.++++......... ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus       103 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~gi---vH~Dikp~NIl  161 (286)
T 3uqc_A          103 -RAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGV---ALSIDHPSRVR  161 (286)
T ss_dssp             -TTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             -CCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCC---ccCCCCcccEE
Confidence             788999999999999999997543333222 22377788999999999   99999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.2e-22  Score=153.76  Aligned_cols=128  Identities=15%  Similarity=0.161  Sum_probs=110.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.........+.+|+.++..+ +||||+++++.+..    .+.+
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~----~~~~   76 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFES----MEEL   76 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEE----TTEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECC-CCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEec----CCEE
Confidence            45789999999999999999999988 889999999987655566789999999999 99999999999998    7899


Q ss_pred             EEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|.+++...  ..+....  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gi---vH~Dlkp~NIl  134 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI---GHFDIRPENII  134 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC---CcCCCCHHHEE
Confidence            9999999999999999732  3443332  22377788999999998   99999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.89  E-value=2.4e-22  Score=156.78  Aligned_cols=130  Identities=17%  Similarity=0.146  Sum_probs=110.6

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ....++|.+.+.||+|+||.||++.+.. ++..+|+|.+.........+.+|+.+++.+ +||||+++++.+..    ..
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~----~~   89 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILT----PT   89 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEETT-TCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC----SS
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEECC-CCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEee----CC
Confidence            3445679999999999999999999988 889999999987654456688999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++. .........  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        90 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~i---vH~Dlkp~Nil  148 (361)
T 3uc3_A           90 HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI---CHRDLKLENTL  148 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CSCCCCGGGEE
T ss_pred             EEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            8999999999999999986 334444333  23377888999999998   99999999984

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=6.2e-22  Score=152.67  Aligned_cols=127  Identities=20%  Similarity=0.231  Sum_probs=108.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..+|++.+.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.+++.+ +||||+++++.+..    .+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~~   87 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIET----EK   87 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----SS
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEE----CC
Confidence            3569999999999999999999987 8899999998763   33556788999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. .........  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~NIl  146 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI---VHRDLKAENLL  146 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             EEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eccCCCHHHEE
Confidence            9999999999999999986 333443332  23377889999999998   99999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.88  E-value=2.4e-22  Score=152.77  Aligned_cols=130  Identities=20%  Similarity=0.319  Sum_probs=109.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++..+|++.+.||+|+||.||++.+.. ++..+|+|.+.... .....+.+|+.+++.+ +||||+++++.+..    .
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~   89 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLV----G   89 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTT-TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----T
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECC-CCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEE----C
Confidence            3455679999999999999999999987 88999999987643 2456688999999998 99999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||||+++|+|.+++.....+.....  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~Dlkp~Nil  148 (297)
T 3fxz_A           90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNIL  148 (297)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCc---eeCCCCHHHEE
Confidence            899999999999999999974444443322  2377788999999988   99999999984

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.88  E-value=5.2e-22  Score=155.04  Aligned_cols=130  Identities=18%  Similarity=0.223  Sum_probs=109.5

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-------hHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-------FIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-------~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      ....+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+.....       ....+.+|+.++..+ .||||+++++.+.
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~   85 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYE   85 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECC-CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEE
Confidence            3445679999999999999999999988 889999999976421       356789999999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    ...+++||||+++|+|.+++. .........  ...+++.+|.|+|..|+   +|+||||+||.
T Consensus        86 ~----~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vHrDlkp~NIl  147 (361)
T 2yab_A           86 N----RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI---AHFDLKPENIM  147 (361)
T ss_dssp             C----SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             e----CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            8    789999999999999999997 333443332  22377788999999988   99999999973

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.88  E-value=6.7e-22  Score=153.95  Aligned_cols=128  Identities=20%  Similarity=0.251  Sum_probs=107.7

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      -++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+||||+++++.+..    .
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKE-TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT----P   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----S
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcC-CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe----C
Confidence            3579999999999999999999987 88999999997632    2455678899999887579999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||+++|+|.+++. ....+.....  ..+++.+|+|+|..|+   +||||||+||.
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi---vHrDlkp~NIL  156 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI---IYRDLKLDNVL  156 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC---cccCCCHHHEE
Confidence            89999999999999999986 3444444332  3377889999999998   99999999984

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=7.3e-22  Score=152.88  Aligned_cols=126  Identities=16%  Similarity=0.239  Sum_probs=107.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +||||+++++.+..    .+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~----~~   78 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQT----HD   78 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEEC----SS
T ss_pred             HHeEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEe----CC
Confidence            469999999999999999999987 88999999997632    2456788999999998 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. ..........  ..++..+|+|+|..|+   +||||||+||.
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIl  137 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV---VYRDIKLENLM  137 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCcCCHHHEE
Confidence            9999999999999999986 3334443332  2377889999999998   99999999984

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.87  E-value=2.8e-21  Score=150.82  Aligned_cols=130  Identities=16%  Similarity=0.198  Sum_probs=109.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +||||+++++.+..   
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~---   99 (362)
T 2bdw_A           25 TKFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQE---   99 (362)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEC---
T ss_pred             CCcccCeEEeeEEecCCCeEEEEEEECC-CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe---
Confidence            3445679999999999999999999987 8899999999764   23456789999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..|+||||+++|+|.+++. .........  ...+++.+|.|+|..|+   +|+||||+||.
T Consensus       100 -~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~Dlkp~NIl  160 (362)
T 2bdw_A          100 -ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI---VHRNLKPENLL  160 (362)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCSGGGEE
T ss_pred             -CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCchHHEE
Confidence             789999999999999999986 333443332  22377788999999998   99999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.87  E-value=1.3e-21  Score=151.88  Aligned_cols=128  Identities=20%  Similarity=0.264  Sum_probs=107.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+||||+++++.+.+    .
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~----~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT----K   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----S
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----C
Confidence            4579999999999999999999988 88999999997642    2345678888888875599999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||++||+|.+++. ....+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIl  150 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI---VYRDLKLDNIL  150 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCChhhEE
Confidence            89999999999999999987 3344443332  3377889999999998   99999999984

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.87  E-value=2.1e-21  Score=149.22  Aligned_cols=128  Identities=16%  Similarity=0.259  Sum_probs=106.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.++|++.+.||+|+||.||++.+.. .+..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+..    .+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~----~~   78 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRRE----GN   78 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEEC----SS
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECC-CCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEec----CC
Confidence            34679999999999999999999987 78899999987643  2345688999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||+++|+|.+++.. .........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~gi---vH~Dlkp~NIl  137 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI---THRDIKPENLL  137 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccchHHEE
Confidence            99999999999999999973 344443332  2377788999999998   99999999984

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.87  E-value=3e-21  Score=151.65  Aligned_cols=131  Identities=20%  Similarity=0.258  Sum_probs=110.9

Q ss_pred             CCCCCCCeEEeeEEeec--CCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          35 LQDCGDRYELGYVIGSG--VCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G--~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +.....+|++.+.||+|  +||.||++.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+..
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~   97 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKP-TGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIA   97 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcC-CCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEE
Confidence            45556789999999999  999999999987 8899999999764   33456788899999999 99999999999998


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-C--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-P--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.+++||||+++|+|.+++. .  ...+.....  ..+++.+|+|+|..++   +|+||||+||.
T Consensus        98 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHrDlkp~NIl  160 (389)
T 3gni_B           98 ----DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY---VHRSVKASHIL  160 (389)
T ss_dssp             ----TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ----CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence                789999999999999999986 2  334443322  2277788999999998   99999999984

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.87  E-value=2.3e-21  Score=147.01  Aligned_cols=128  Identities=22%  Similarity=0.212  Sum_probs=108.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..++|++.+.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.++..+ +||||+++++.+..    
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~----   82 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTI-LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEE----   82 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETT-TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEEC----
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECC-CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeee----
Confidence            45679999999999999999999987 7889999998643    23456789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+++||||+++|+|.+++. ....+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~Dlkp~Nil  143 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI---VHRDIKPQNIL  143 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            789999999999999999987 3334443332  2377788999999998   99999999984

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.87  E-value=2.9e-21  Score=147.17  Aligned_cols=127  Identities=15%  Similarity=0.197  Sum_probs=108.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .++|.+.+.||+|+||.||++.+.. ++..+|+|.+... ......+.+|+.++..+ +||||+++++.+..    ....
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~-~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~~~   82 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRE-TGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYK----DKRL   82 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE----TTEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECC-CCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEec----CCee
Confidence            3579999999999999999999987 7889999988654 44667899999999999 99999999999998    7899


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|.+++..  ........  ...+...+|+|+|..++   +|+||||+||.
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~dlkp~Nil  140 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI---IHRDLNSHNCL  140 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSTTSEE
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCCcCeEE
Confidence            999999999999999972  33343332  22377788999999998   99999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.87  E-value=2.1e-21  Score=150.70  Aligned_cols=127  Identities=21%  Similarity=0.292  Sum_probs=107.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||++.+.. ++..+|+|.+...    ......+..|..++..+.+||||+++++.+..    ..
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----~~   83 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKK-TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----ES   83 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----SS
T ss_pred             hheEEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe----CC
Confidence            469999999999999999999988 8899999999753    23456688899999886689999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. ...........  .++..+|+|+|..|+   +||||||+||.
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIl  142 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI---IYRDLKLDNVL  142 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCHHHEE
Confidence            9999999999999999986 33444433322  377889999999998   99999999984

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.87  E-value=1e-21  Score=155.08  Aligned_cols=128  Identities=20%  Similarity=0.273  Sum_probs=106.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+||||+++++++.+    .
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKK-TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----E  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----S
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----C
Confidence            3579999999999999999999988 88999999997642    2334578899988876689999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||+++|+|.+++. ....+......  .+++.+|+|+|..|+   +||||||+||.
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi---vHrDLKp~NIL  185 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI---IYRDLKLDNVL  185 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EeccCCHHHEE
Confidence            89999999999999999987 34444444333  377889999999998   99999999984

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.87  E-value=5.7e-22  Score=157.19  Aligned_cols=129  Identities=14%  Similarity=0.093  Sum_probs=108.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...++|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+ +||||+++++.+.+   
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~---  140 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKS-TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQD---  140 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEEC---
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECC-CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEE---
Confidence            345679999999999999999999988 88999999987532    1223477899999998 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|+||||++||+|.+++............  .++..+|+|+|..|+   +||||||+||.
T Consensus       141 -~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~gi---vHrDLKp~NIL  200 (410)
T 3v8s_A          141 -DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---IHRDVKPDNML  200 (410)
T ss_dssp             -SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             -CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHee
Confidence             78999999999999999999744444433322  377889999999998   99999999984

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.87  E-value=3.7e-21  Score=154.00  Aligned_cols=129  Identities=13%  Similarity=0.107  Sum_probs=107.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ...+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+....   .....+.+|+.+++.+ +||||+++++.+..    
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----   81 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVL-AGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISE----   81 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETT-TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEEC----
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECC-CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEE----
Confidence            345679999999999999999999988 88999999987642   3456789999999999 99999999999998    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..++||||+++|+|.+.+. .........  ...+++.+|.|+|..|+   +|+||||+||.
T Consensus        82 ~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~gi---vHrDlKp~NIl  142 (444)
T 3soa_A           82 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV---VHRNLKPENLL  142 (444)
T ss_dssp             SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCSSTTEE
T ss_pred             CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            889999999999999999986 444444332  23377788999999998   99999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.87  E-value=1.5e-21  Score=149.98  Aligned_cols=126  Identities=16%  Similarity=0.259  Sum_probs=107.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+ +||||+++++.+.+    ..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~----~~   79 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRH-NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQD----AQ   79 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEEC----SS
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEe----CC
Confidence            469999999999999999999987 88999999997642    2355678899999998 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. ....+.....  ..++..+|+|+|..|+   +|+||||+||.
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIl  138 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI---IYRDLKPENIL  138 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCChheEE
Confidence            9999999999999999997 3444444332  2377889999999988   99999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.87  E-value=2.1e-21  Score=157.46  Aligned_cols=130  Identities=19%  Similarity=0.265  Sum_probs=107.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--------------hhHHHHHHHHHHHHhccCCCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--------------EFIDDIKEEYRMLRDLSQHSNIP  101 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--------------~~~~~~~~e~~~~~~l~~h~niv  101 (176)
                      ....+.|.+++.||+|+||.||+|.+.. ++..+|+|.+....              .....+.+|+.+++.+ +||||+
T Consensus        32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv  109 (504)
T 3q5i_A           32 GKIGESYFKVRKLGSGAYGEVLLCKEKN-GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNII  109 (504)
T ss_dssp             SCGGGTEEEEEEEEC--CEEEEEEEETT-TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBC
T ss_pred             CCcccceEEEeEecccCCeEEEEEEECC-CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCC
Confidence            4556789999999999999999999987 88899999987532              2346788999999999 999999


Q ss_pred             eeceeEEeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         102 DFFGAYMKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++.+..    ...+++||||+++|+|.+++. ....+....  ...+++.+|+|+|..|+   +|+||||+||.
T Consensus       110 ~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dlkp~Nil  178 (504)
T 3q5i_A          110 KLFDVFED----KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNI---VHRDIKPENIL  178 (504)
T ss_dssp             CEEEEEEC----SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eEEEEEEc----CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCcHHHEE
Confidence            99999998    789999999999999999886 333443332  23377889999999998   99999999984

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.86  E-value=3.6e-21  Score=143.82  Aligned_cols=130  Identities=18%  Similarity=0.158  Sum_probs=108.5

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      |....+.|++.+.||+|+||.||++.+..  +..+|+|.+.........+.+|+.++..+ +||||+++++.+..    .
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~   77 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLE----Q   77 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECS----S
T ss_pred             EEeChhhceeeheecCCCccEEEEEEecC--CCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEec----C
Confidence            44445679999999999999999999864  66799999987654556789999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++|+|.+++..  ...+.....  ..+...+|+++|..++   +|+|+||+||.
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~dikp~Nil  138 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCL  138 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe---ecCCcchheEE
Confidence            889999999999999999962  334443322  2267778999999998   99999999984

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=2e-21  Score=146.10  Aligned_cols=134  Identities=16%  Similarity=0.146  Sum_probs=108.2

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ....+....++|++.+.||+|+||.||.+.+..  +..+|+|.+.........+.+|+.++..+ .|+||+++++.+.. 
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-   90 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTK-   90 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEETT--TEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECS-
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEcC--CCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEec-
Confidence            345566677789999999999999999998854  67899999987654556789999999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+.++++|||+++|+|.+++..  ...+.....  ..+...+|.++|..++   +|+||||+||.
T Consensus        91 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dikp~Nil  152 (283)
T 3gen_A           91 ---QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCL  152 (283)
T ss_dssp             ---SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCSGGGEE
T ss_pred             ---CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCCCccceEE
Confidence               7889999999999999999863  334433322  2267778999999998   99999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.86  E-value=1.7e-21  Score=155.57  Aligned_cols=130  Identities=16%  Similarity=0.117  Sum_probs=108.6

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh----hHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~----~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....++|.+.+.||+|+||.||++.+.. ++..+|+|.+.....    ....+..|..++..+ +|+||+++++.+.+  
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~--  145 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQD--  145 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEEC--
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcC-CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee--
Confidence            3445679999999999999999999987 889999999975321    223478899999998 99999999999998  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+|+||||+++|+|.+++..  ...+......  .++..+|+|+|..++   |||||||+||.
T Consensus       146 --~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gi---iHrDLKp~NIL  207 (437)
T 4aw2_A          146 --DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---VHRDIKPDNIL  207 (437)
T ss_dssp             --SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             --CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCe---EecccCHHHee
Confidence              7899999999999999999963  3444444333  377889999999998   99999999984

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=5.2e-21  Score=150.64  Aligned_cols=128  Identities=13%  Similarity=0.134  Sum_probs=108.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ..+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .....+.+|+.++..+ +|+||+++++.+..    ...
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~----~~~  122 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFED----KYE  122 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEEC----SSE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECC-CCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEe----CCE
Confidence            34579999999999999999999987 88899999998653 3456789999999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++...  .......  ...+++.+|+|+|..|+   +|+||||+||.
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vHrDlkp~NIl  181 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI---VHLDIKPENIM  181 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccchHHeE
Confidence            99999999999999999732  3333332  22377788999999998   99999999984

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=2.2e-21  Score=150.89  Aligned_cols=126  Identities=14%  Similarity=0.225  Sum_probs=107.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +||||+++++.+.+    ..
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~  114 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKE-SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKD----NS  114 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SS
T ss_pred             HHCEEEEEeecCcCcEEEEEEECC-CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEc----CC
Confidence            579999999999999999999987 88999999987642    2356788999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. ..........  ..++..+|+|+|..|+   +|+||||+||.
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIl  173 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL---IYRDLKPENLL  173 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCccceEE
Confidence            9999999999999999997 3344443332  2377788999999998   99999999984

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.86  E-value=4.5e-21  Score=147.52  Aligned_cols=129  Identities=19%  Similarity=0.216  Sum_probs=108.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ...+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....       .....+.+|+.++..+ +||||+++++.+..
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   85 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN   85 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECC-CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEe
Confidence            344679999999999999999999987 88999999987532       1356789999999999 99999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          ...+++||||+++|+|.+++. ....+....  ...+.+.+|.|+|..++   +|+||||+||.
T Consensus        86 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dlkp~NIl  146 (326)
T 2y0a_A           86 ----KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI---AHFDLKPENIM  146 (326)
T ss_dssp             ----SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             ----CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCe---EcCCCCHHHEE
Confidence                788999999999999999996 333333332  22377788999999998   99999999984

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.86  E-value=2.4e-21  Score=145.91  Aligned_cols=135  Identities=14%  Similarity=0.222  Sum_probs=114.4

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      .++.+....++|++.+.||+|+||.||.+.+.. .+..+|+|.+.........+.+|+.+++.+ +|+||+++++.+.. 
T Consensus         4 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-   80 (288)
T 3kfa_A            4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR-   80 (288)
T ss_dssp             TCCTTBCCGGGEEEEEESGGGTTCSEEEEEEGG-GTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-
T ss_pred             chhcccccccceeEEeecCCCCceeEEEeEecC-CCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcc-
Confidence            445567777889999999999999999999987 788999999987666677899999999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....++||||+++|+|.+++..   .........  ..+...+|.++|..|+   +|+||+|+||.
T Consensus        81 ---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~dikp~Nil  143 (288)
T 3kfa_A           81 ---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCL  143 (288)
T ss_dssp             ---SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTC---CCSCCSGGGEE
T ss_pred             ---CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCc---cCCCCCcceEE
Confidence               7889999999999999999962   223333322  2267778999999998   99999999984

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.86  E-value=5e-21  Score=148.68  Aligned_cols=136  Identities=13%  Similarity=0.202  Sum_probs=113.1

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc----CCCCcceece
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS----QHSNIPDFFG  105 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~----~h~niv~~~~  105 (176)
                      +.+.......++|.+.+.||+|+||.||+|.+.. .+..+|+|.+.........+..|+.++..+.    .|+||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHID-NKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECC-CCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            4455556667889999999999999999999987 7889999999876666677888999999883    3999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..    ...+++||||+ +++|.+++...   ........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus       104 ~~~~----~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~NIl  169 (360)
T 3llt_A          104 KFMY----YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL---THTDLKPENIL  169 (360)
T ss_dssp             EEEE----TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eeeE----CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCcccEE
Confidence            9998    78999999999 89999998722   24433322  2377888999999998   99999999984

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.86  E-value=1.7e-21  Score=153.27  Aligned_cols=127  Identities=13%  Similarity=0.254  Sum_probs=108.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+++.||+|+||.||.+.+.. ++..+|+|.+....    .....+.+|+.++..+ +||||+++++.+.+    .
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~----~   87 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKND-TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQD----E   87 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----S
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEe----C
Confidence            4679999999999999999999988 88999999987542    2356788999999999 99999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||++||+|.+++.. .........  ..+++.+|.|+|..|+   +|+||||+||.
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi---vHrDlkp~NIl  147 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI---IHRDMKPDNIL  147 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCcHHHeE
Confidence            899999999999999999973 344444332  2377889999999998   99999999984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.86  E-value=2.4e-21  Score=156.92  Aligned_cols=134  Identities=14%  Similarity=0.218  Sum_probs=113.5

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .+.+......|.+.+.||+|+||.||+|.+.. .+..+|+|.+.........+.+|+.+++.+ +|+||+++++.+..  
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~--  287 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR--  287 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGG-GTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS--
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcC-CCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEec--
Confidence            45566677889999999999999999999987 788999999987655567899999999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+++||||+++|+|.++++.   .........  ..+++.+|+|+|..++   +|+||||+||.
T Consensus       288 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vHrDlkp~NIl  350 (495)
T 1opk_A          288 --EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRNLAARNCL  350 (495)
T ss_dssp             --SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             --CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChhhEE
Confidence              7889999999999999999962   223332222  2377788999999998   99999999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=2.5e-21  Score=150.78  Aligned_cols=128  Identities=14%  Similarity=0.188  Sum_probs=107.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+..|++|+++++.+..    .
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----~   93 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----M   93 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT-EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC----S
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc----C
Confidence            3569999999999999999999987 78899999997642    2355678899999887689999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||++||+|.+++. ....+.....  ..++..+|.|+|..|+   +||||||+||.
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi---vHrDlkp~NIl  153 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI---IYRDLKLDNVM  153 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EeccCCHHHEE
Confidence            89999999999999999987 3444444332  3377889999999998   99999999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.86  E-value=4.8e-21  Score=148.78  Aligned_cols=130  Identities=18%  Similarity=0.171  Sum_probs=102.9

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .....+.|.+.+.||+|+||.||+|.+.. .+..+|+|.+.... ....+.+|+.++..+ .|+||+++++.+..    .
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~  120 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKG-TQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFET----P  120 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEEC----S
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECC-CCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEec----C
Confidence            34556679999999999999999999987 78899999987643 235678899999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++||||+++|+|.+++.. ........  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus       121 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dikp~NIl  180 (349)
T 2w4o_A          121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI---VHRDLKPENLL  180 (349)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCcccEE
Confidence            889999999999999999873 33343332  22377788999999998   99999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.86  E-value=4.7e-21  Score=148.86  Aligned_cols=128  Identities=16%  Similarity=0.195  Sum_probs=106.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh------hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ..+.|++.+.||+|+||.||+|.+.. ++..+|+|.+....      .....+.+|+.++..+ +||||+++++.+..  
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~--   97 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRE-TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSS--   97 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEE--
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECC-CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEe--
Confidence            34679999999999999999999988 88999999987532      1356789999999999 99999999999998  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+|+||||+++|+|.+++..     ........  ...+++.+|+|+|..++   +|+||||+||.
T Consensus        98 --~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vHrDlkp~NIl  162 (351)
T 3c0i_A           98 --DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI---IHRDVKPHCVL  162 (351)
T ss_dssp             --TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             --CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCChHHeE
Confidence              7899999999999999888751     12333322  23377889999999998   99999999984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.86  E-value=1.7e-21  Score=154.56  Aligned_cols=129  Identities=16%  Similarity=0.135  Sum_probs=108.2

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...++|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+ +|+||+++++.+.+   
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~-~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~---  132 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQ-TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQD---  132 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEEC---
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEee---
Confidence            345679999999999999999999987 88999999997532    1234578899999998 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+|+||||+++|+|.+++..  ...+.....  ..+...+|+|+|..|+   |||||||+||.
T Consensus       133 -~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi---iHrDLKp~NIL  194 (412)
T 2vd5_A          133 -ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY---VHRDIKPDNIL  194 (412)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             -CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecccCHHHee
Confidence             7899999999999999999962  344444333  2377889999999998   99999999984

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.86  E-value=2e-21  Score=150.74  Aligned_cols=100  Identities=22%  Similarity=0.263  Sum_probs=83.5

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEe-----cCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCccee
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALD-----TQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      ....|..+.++|.+.+.||+|+||.||++.+     .. .+..+|+|.+...  ......+.+|+.++..+.+||||+++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA-TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTT-CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccc-cceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            3445667788999999999999999999984     33 4578999999764  23456789999999998788999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcC
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      ++.+...   ...++++|||+++|+|.+++.
T Consensus        92 ~~~~~~~---~~~~~iv~e~~~~g~L~~~l~  119 (359)
T 3vhe_A           92 LGACTKP---GGPLMVIVEFCKFGNLSTYLR  119 (359)
T ss_dssp             EEEECST---TSCCEEEEECCTTEEHHHHHH
T ss_pred             eeeeecC---CCceEEEEEecCCCcHHHHHH
Confidence            9998773   455899999999999999986

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.86  E-value=4.1e-21  Score=150.52  Aligned_cols=134  Identities=20%  Similarity=0.262  Sum_probs=111.1

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      .+.|....+.|.+.+.||+|+||.||+|.+.. .+..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+..
T Consensus       106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~  183 (377)
T 3cbl_A          106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRA-DNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQ  183 (377)
T ss_dssp             CCTTBCCGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             ccccEEchHHeEEeeEeccCCCCeEEEEEEec-CCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEec
Confidence            34566667789999999999999999999987 7889999998754  23445688999999999 99999999999987


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.+++||||+++|+|.++++.  .........  ..++..+|+|+|..++   +|+||||+||.
T Consensus       184 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHrDlkp~Nil  245 (377)
T 3cbl_A          184 ----KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCL  245 (377)
T ss_dssp             ----SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ----CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---CCcccCHHHEE
Confidence                7889999999999999999862  234433322  2267778999999998   99999999984

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.86  E-value=7.1e-21  Score=145.46  Aligned_cols=134  Identities=20%  Similarity=0.226  Sum_probs=108.0

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      ...+.+.....+|.+.+.||+|+||.||++.+   .+..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~  102 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGA  102 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            34555667778999999999999999999987   4678999998764   23456789999999999 99999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCCC----CChhhH--hhhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPDE----LDLDNL--QDCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~--~~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                      +..    ...+++||||+++|+|.+++....    .+....  ...+...+|+|+|..|  +   +|+||||+||.
T Consensus       103 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~i---vH~Dikp~NIl  171 (309)
T 3p86_A          103 VTQ----PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI---VHRNLKSPNLL  171 (309)
T ss_dssp             ECS----TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCC---CCTTCCGGGEE
T ss_pred             EEE----CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCE---ECCCCChhhEE
Confidence            988    788999999999999999996322    333322  2237778899999999  8   99999999984

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.86  E-value=8.3e-21  Score=143.92  Aligned_cols=128  Identities=17%  Similarity=0.220  Sum_probs=102.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---------------------------hHHHHHHHHHHHH
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---------------------------FIDDIKEEYRMLR   92 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---------------------------~~~~~~~e~~~~~   92 (176)
                      ++|++.+.||+|+||.||++.+.. .+..+|+|.+.....                           ....+.+|+.+++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNEN-DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETT-TTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             cceEEEeEEeecCCEEEEEEEECC-CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            579999999999999999999987 889999999875421                           1245789999999


Q ss_pred             hccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCC
Q psy9091          93 DLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDT  170 (176)
Q Consensus        93 ~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~  170 (176)
                      .+ +||||+++++.+....  ...+++||||+++|+|.+++.....+.....  ..+...+|+|+|..++   +|+||||
T Consensus        92 ~l-~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlkp  165 (298)
T 2zv2_A           92 KL-DHPNVVKLVEVLDDPN--EDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKI---IHRDIKP  165 (298)
T ss_dssp             TC-CCTTBCCEEEEEECSS--SSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCG
T ss_pred             hC-CCCCCCeEEEEEEcCC--CCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCH
Confidence            99 9999999999987621  4679999999999999988764444443332  2267788999999998   9999999


Q ss_pred             CCcc
Q psy9091         171 QNVT  174 (176)
Q Consensus       171 ~nv~  174 (176)
                      +||.
T Consensus       166 ~Nil  169 (298)
T 2zv2_A          166 SNLL  169 (298)
T ss_dssp             GGEE
T ss_pred             HHEE
Confidence            9984

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.86  E-value=9.6e-21  Score=145.08  Aligned_cols=144  Identities=26%  Similarity=0.411  Sum_probs=114.6

Q ss_pred             CCcccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          27 PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      ...+++..+....+.|.+.+.||+|+||.||+|.+.. .+..+|+|.+.........+.+|+.++..+.+|+||+++++.
T Consensus        11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   89 (326)
T 2x7f_A           11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA   89 (326)
T ss_dssp             -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred             chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECC-CCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence            3446777788889999999999999999999999987 788999999987654556788999999988689999999999


Q ss_pred             EEecc--CCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         107 YMKKH--QTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       107 ~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +....  .....+++||||+++|+|.+++..   ........  ...+.+.+|.|+|..|+   +|+||+|+||.
T Consensus        90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~dlkp~NIl  161 (326)
T 2x7f_A           90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV---IHRDIKGQNVL  161 (326)
T ss_dssp             EEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             EeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCcHHHEE
Confidence            97632  113579999999999999999862   23333222  22377788999999998   99999999984

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.86  E-value=3.2e-21  Score=147.17  Aligned_cols=134  Identities=19%  Similarity=0.284  Sum_probs=108.6

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....++|++.+.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.++..+ +||||+++++.+....
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAET   85 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECC-CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccC
Confidence            3456789999999999999999999987 8899999999764    23455788999999998 9999999999987633


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+..+|+||||+++|+|.+++. .........  ...+...+|+|+|..++   +|+||||+||.
T Consensus        86 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil  148 (311)
T 3ork_A           86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIM  148 (311)
T ss_dssp             TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---CcCCCCHHHEE
Confidence            22335699999999999999986 333444332  22377788999999998   99999999984

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.86  E-value=5.7e-21  Score=145.74  Aligned_cols=130  Identities=15%  Similarity=0.255  Sum_probs=108.0

Q ss_pred             CCCCCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.+.|.+. +.||+|+||.||++.+.. .+..+|+|.+.... .....+.+|+.++..+.+|+||+++++.+..    .
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~----~   83 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLI-TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE----E   83 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSS-SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE----T
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcC-CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee----C
Confidence            455679986 789999999999999887 78899999997653 3456788999999885489999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||||+++|+|.+++. ....+....  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~dlkp~Nil  143 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI---AHRDLKPENIL  143 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---eeCCCCHHHEE
Confidence            89999999999999999986 333343332  22377788999999998   99999999984

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.86  E-value=5e-21  Score=146.51  Aligned_cols=131  Identities=17%  Similarity=0.191  Sum_probs=107.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ....+|.+.+.||+|+||.||+|.+.. ++..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+....  .
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~--~   81 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKK-TGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT--T   81 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT--T
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCC--C
Confidence            345679999999999999999999987 78999999987643  2456678999999999 9999999999987621  3


Q ss_pred             ceEEEEEecCCCCChhhhcCCC----CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD----ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++||||+++|+|.+++...    ........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  144 (319)
T 4euu_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI---VHRNIKPGNIM  144 (319)
T ss_dssp             CCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEE
Confidence            4789999999999999999631    13433322  2277788999999998   99999999983

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.85  E-value=3.2e-21  Score=149.47  Aligned_cols=127  Identities=19%  Similarity=0.193  Sum_probs=105.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .+.+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+.....   ....|+.++..+.+||||+++++.+.+    ...
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~----~~~   90 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKA-TNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDD----GKY   90 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEEC----SSE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEc----CCE
Confidence            445679999999999999999999988 889999999976532   234577777776589999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++. .........  ...++..+|+|+|..|+   +|+||||+||.
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~gi---vHrDlkp~NIl  148 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNIL  148 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---EeccCCHHHEE
Confidence            999999999999999986 333444333  22377788999999998   99999999984

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.85  E-value=5.9e-21  Score=146.80  Aligned_cols=129  Identities=20%  Similarity=0.182  Sum_probs=106.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....+|.+.+.||+|+||.||.+.+.. .+   ..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+..  
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~--  121 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRV-PGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTR--  121 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECC-TTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECG--
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEec-CCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEe--
Confidence            345689999999999999999999864 33   46999999764  34566789999999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ....++||||+++|+|.+++..  .........  ..+...+|+|+|..++   +|+||||+||.
T Consensus       122 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  183 (325)
T 3kul_A          122 --GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVL  183 (325)
T ss_dssp             --GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             --CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCCCcceEE
Confidence              7889999999999999999962  334443322  2266778999999998   99999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.85  E-value=6.6e-21  Score=145.88  Aligned_cols=130  Identities=15%  Similarity=0.187  Sum_probs=103.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc------
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH------  111 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~------  111 (176)
                      ++|.+.+.||+|+||.||++.+.. ++..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+....      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKV-DDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETT-TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcC-CCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhh
Confidence            469999999999999999999987 7899999998753  23567789999999999 9999999999886521      


Q ss_pred             -----------------------------------------------CCcceEEEEEecCCCCChhhhcCCCCC-C-hh-
Q psy9091         112 -----------------------------------------------QTHSEIWFVMQREAEMPPPRALKPDEL-D-LD-  141 (176)
Q Consensus       112 -----------------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~-~-~~-  141 (176)
                                                                     .....++++|||+++|+|.+++..... . .. 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                           001248999999999999999973211 1 11 


Q ss_pred             ---hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         142 ---NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       142 ---~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .....+.+.+|+|+|..|+   +|+||||+||.
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  196 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGL---MHRDLKPSNIF  196 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCe---eecCCCcccEE
Confidence               1123377888999999998   99999999984

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.85  E-value=8.7e-21  Score=145.99  Aligned_cols=128  Identities=20%  Similarity=0.260  Sum_probs=101.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEec---CCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDT---QNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ..++|.+.+.||+|+||.||++.+.   . .+..+|+|.+....     .....+.+|+.+++.+ +|+||+++++.+..
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   92 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGAN-TGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQT   92 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTT-TTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCC-CCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEc
Confidence            3467999999999999999999874   4 57899999987642     2345678899999999 99999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.+|+||||+++|+|.+++. .........  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        93 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~Dlkp~Nil  153 (327)
T 3a62_A           93 ----GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI---IYRDLKPENIM  153 (327)
T ss_dssp             ----SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCTTTEE
T ss_pred             ----CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE---EcccCCHHHeE
Confidence                788999999999999999986 333343332  23377788999999998   99999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.85  E-value=8.3e-21  Score=141.70  Aligned_cols=129  Identities=17%  Similarity=0.152  Sum_probs=107.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .-..++|++.+.||+|+||.||++.+..  +..+|+|.+.........+.+|+.++..+ +||||+++++.+..    ..
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~   76 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKG--QYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSK----EY   76 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECS----SS
T ss_pred             EechhheeeeeeeccCCCceEEEEEecC--ceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEcc----CC
Confidence            3455689999999999999999998754  66799999987655556789999999999 99999999999987    78


Q ss_pred             eEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||+++|+|.+++..  ...+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dikp~Nil  136 (268)
T 3sxs_A           77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF---IHRDLAARNCL  136 (268)
T ss_dssp             SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---EESSCSGGGEE
T ss_pred             ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCcCcceEE
Confidence            89999999999999999862  223433322  2267778999999998   99999999984

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.85  E-value=3.7e-21  Score=150.82  Aligned_cols=128  Identities=17%  Similarity=0.206  Sum_probs=98.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHH-HhccCCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRML-RDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~-~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++ +.+ +||||+++++.+..   
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~---  110 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKA-EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQT---  110 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETT-TCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEEC---
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEe---
Confidence            34579999999999999999999988 88899999997642    2334566676663 555 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|+||||++||+|.+++. ..........  ..++..+|+|+|..|+   +||||||+||.
T Consensus       111 -~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi---vHrDlkp~NIl  171 (373)
T 2r5t_A          111 -ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI---VYRDLKPENIL  171 (373)
T ss_dssp             -SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             -CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCHHHEE
Confidence             789999999999999999987 3334443332  3377889999999998   99999999984

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.85  E-value=2.1e-20  Score=140.53  Aligned_cols=129  Identities=16%  Similarity=0.199  Sum_probs=108.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ...++|.+.+.||+|+||.||++.+.. .+..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+..    
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   76 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQE----   76 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcC-CCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEc----
Confidence            456789999999999999999999987 7889999998753   23456788999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..+++|||+++|+|.+.+. ....+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dikp~Nil  137 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI---VHRNLKPENLL  137 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---CcCCCCHHHEE
Confidence            788999999999999988876 333343332  22377778999999998   99999999985

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=8.8e-21  Score=152.04  Aligned_cols=133  Identities=18%  Similarity=0.243  Sum_probs=110.8

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ..+.+....+.|.+.+.||+|+||.||+|.+..  +..+|+|.+.........+.+|+.+++.+ +||||+++++.+.. 
T Consensus       179 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~-  254 (454)
T 1qcf_A          179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-  254 (454)
T ss_dssp             CTTCSBCCGGGEEEEEEEECCSSEEEEEEEETT--TEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEECS-
T ss_pred             cccceeechHHeEEEEEcccCCceEEEEEEECC--ccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEeC-
Confidence            345677778899999999999999999999854  67899999987655667899999999999 99999999998754 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          +.+++||||+++|+|.+++...   .......  ...+++.+|+|+|..++   +|+||||+||.
T Consensus       255 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHrDlkp~Nil  316 (454)
T 1qcf_A          255 ----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANIL  316 (454)
T ss_dssp             ----SSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCSGGGEE
T ss_pred             ----CccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCCHHHEE
Confidence                6789999999999999999631   3333332  23377788999999998   99999999984

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.85  E-value=1.3e-20  Score=151.06  Aligned_cols=132  Identities=18%  Similarity=0.217  Sum_probs=109.6

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .+.|....+.|++.+.||+|+||.||+|.+..  +..+|+|.+.........+.+|+.+++.+ +||||+++++.+..  
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--  250 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE--  250 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS--
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECC--CceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC--
Confidence            45677778899999999999999999999865  46799999987554556799999999999 99999999998754  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         +.+++||||+++|+|.+++..   ...+....  ...+++.+|+|+|..++   +|+||||+||.
T Consensus       251 ---~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---vHrDlkp~Nil  312 (452)
T 1fmk_A          251 ---EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANIL  312 (452)
T ss_dssp             ---SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ---CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChhhEE
Confidence               668999999999999999972   22443332  22377788999999998   99999999984

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.85  E-value=6.9e-21  Score=144.08  Aligned_cols=131  Identities=18%  Similarity=0.185  Sum_probs=105.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEe----cCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALD----TQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....+|++.+.||+|+||.||++.+    .. .+..+|+|.+... ......+.+|+.++..+ +|+||+++++.+....
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   84 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG   84 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSS-CCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHH
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCC-CCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence            3456899999999999999999984    44 5789999998765 34566789999999999 9999999999886521


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+++||||+++|+|.+++..  ...+.....  ..+...+|+|+|..++   +|+||||+||.
T Consensus        85 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dikp~Nil  146 (295)
T 3ugc_A           85 --RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNIL  146 (295)
T ss_dssp             --HTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             --CCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCHhhEE
Confidence              3558999999999999999962  224433322  2377788999999998   99999999984

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.85  E-value=1.5e-20  Score=149.29  Aligned_cols=126  Identities=19%  Similarity=0.277  Sum_probs=103.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      .++|.+.+.||+|+||.||+|.+.. ++..+|+|.+....         .....+.+|+.+++.+ +||||+++++.+..
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~  211 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA  211 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEES
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECC-CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            4679999999999999999999988 88999999987532         1122478999999999 99999999999854


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                           +..++||||+++|+|.+++. .........  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus       212 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---vHrDlkp~NIl  271 (419)
T 3i6u_A          212 -----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI---IHRDLKPENVL  271 (419)
T ss_dssp             -----SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             -----CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCChHhEE
Confidence                 56899999999999999987 334444332  22377889999999998   99999999984

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.85  E-value=1.9e-20  Score=143.76  Aligned_cols=126  Identities=17%  Similarity=0.289  Sum_probs=107.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ..|...+.||+|+||.||++.+.. .+..+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+..    .+..+
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~  118 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKH-SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLV----GEELW  118 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEE----TTEEE
T ss_pred             hhhhccEEeccCCCeEEEEEEECC-CCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEE----CCEEE
Confidence            358888999999999999999987 78999999998653 2456788999999999 99999999999998    78999


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++|+|.+++.....+......  .+...+|+|+|..|+   +|+||||+||.
T Consensus       119 lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  173 (321)
T 2c30_A          119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGV---IHRDIKSDSIL  173 (321)
T ss_dssp             EEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            999999999999999754454443322  266778999999988   99999999984

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.85  E-value=7.4e-21  Score=148.80  Aligned_cols=132  Identities=18%  Similarity=0.298  Sum_probs=106.1

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecC------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      ....++|.+.+.||+|+||.||++.+..      ..+..+|+|.+...  ......+.+|+.++..+.+||||+++++.+
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            3445689999999999999999998631      03457999998764  335667899999999986899999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEAL  168 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~  168 (176)
                      ..    .+.+|+||||+++|+|.+++...                 .......  ...++..+|+|+|..|+   +|+||
T Consensus       157 ~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDl  229 (370)
T 2psq_A          157 TQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDL  229 (370)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             cc----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe---ecccc
Confidence            88    78899999999999999998621                 1222222  23377788999999998   99999


Q ss_pred             CCCCcc
Q psy9091         169 DTQNVT  174 (176)
Q Consensus       169 ~~~nv~  174 (176)
                      ||+||.
T Consensus       230 kp~NIl  235 (370)
T 2psq_A          230 AARNVL  235 (370)
T ss_dssp             CGGGEE
T ss_pred             chhhEE
Confidence            999984

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.85  E-value=1.5e-20  Score=145.06  Aligned_cols=130  Identities=18%  Similarity=0.215  Sum_probs=109.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .....+|.+.+.||+|+||.||++.+.. .+..+++|.+...    ......+.+|+.+++.+ +|+||+++++.+..  
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~--  112 (335)
T 2owb_A           37 PRSRRRYVRGRFLGKGGFAKCFEISDAD-TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFED--  112 (335)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEC--
T ss_pred             cccCCceEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec--
Confidence            3456689999999999999999999987 7889999998753    23566789999999999 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.++++|||+++++|.+++. ..........  ..+...+|.|+|..|+   +|+||+|+||.
T Consensus       113 --~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIl  173 (335)
T 2owb_A          113 --NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV---IHRDLKLGNLF  173 (335)
T ss_dssp             --SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             --CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC---EecCCCchhEE
Confidence              789999999999999999986 3334443322  2377788999999988   99999999984

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=8.8e-21  Score=152.97  Aligned_cols=126  Identities=21%  Similarity=0.234  Sum_probs=107.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||.|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+..    ..
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~----~~   89 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVIST----PS   89 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETT-TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SS
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----CC
Confidence            569999999999999999999987 88999999997642    2355789999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++. ....+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vHrDLkp~NIl  148 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV---VHRDLKPENVL  148 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECSCCSGGGEE
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---CcccccHHHEE
Confidence            8999999999999999997 334444332  23377888999999988   99999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.85  E-value=7.5e-21  Score=153.37  Aligned_cols=130  Identities=16%  Similarity=0.182  Sum_probs=109.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....++|.+.+.||+|+||.||+|.+.. ++..+|+|.+...    ......+.+|+.+++.+ +||||+++++.+..  
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~--   97 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFED--   97 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC--
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECC-CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEe--
Confidence            3455689999999999999999999987 8899999998753    23466789999999999 99999999999998  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+++||||+.+|+|.+++. .........  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        98 --~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dlkp~Nil  158 (484)
T 3nyv_A           98 --KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI---VHRDLKPENLL  158 (484)
T ss_dssp             --SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             --CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEE
Confidence              789999999999999999886 333433332  23377788999999998   99999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.85  E-value=4.4e-21  Score=155.23  Aligned_cols=128  Identities=16%  Similarity=0.173  Sum_probs=104.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..+.|.+++.||+|+||.||+|.+.. ++..+|+|.+....   .....+.+|+.+++.+ +||||+++++.+..    .
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~----~  108 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFED----K  108 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETT-TCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEEC----S
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECC-CCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe----C
Confidence            34479999999999999999999987 88899999987642   2356788999999999 99999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||+++|+|.+.+. .........  ...+++.+|+|+|..|+   +|+||||+||.
T Consensus       109 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dlkp~Nil  168 (494)
T 3lij_A          109 RNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI---VHRDLKPENLL  168 (494)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCChhhEE
Confidence            89999999999999998886 333333322  23377889999999998   99999999984

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.85  E-value=8.9e-21  Score=142.89  Aligned_cols=128  Identities=12%  Similarity=0.132  Sum_probs=106.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCC-------eEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGN-------KKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-------~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ..++|.+.+.||+|+||.||++.+.. .+       ..+++|.+.... .....+.+|+.++..+ +|+||+++++.+..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRRE-VGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVC   83 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEE-ECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECC
T ss_pred             chhHeeeeeeeccCCCceEEEEEEec-ccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEe
Confidence            34679999999999999999998865 44       469999987643 4567789999999999 99999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+..++||||+++|+|.+++...  ..+....  ...+...+|.|+|..++   +|+||||+||.
T Consensus        84 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  145 (289)
T 4fvq_A           84 ----GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL---IHGNVCAKNIL  145 (289)
T ss_dssp             ----TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             ----CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe---ECCCcCcceEE
Confidence                78889999999999999999722  2443332  22377788999999998   99999999984

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.85  E-value=5e-21  Score=146.90  Aligned_cols=131  Identities=19%  Similarity=0.189  Sum_probs=105.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      -..++|++.+.||+|+||.||+|.+   .+..+|+|.+............|+.++..+ +||||+++++.+.........
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred             cchhhchhhheecccCceEEEEEEE---CCCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCce
Confidence            3446799999999999999999987   468999999977655555667788889998 999999999999874322345


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhc----------CCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGS----------GVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~----------~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++...........  ..+...+|+|+|..          ++   +|+||||+||.
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~i---vH~Dlkp~Nil  163 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI---SHRDIKSKNVL  163 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEE---ECSCCSGGGEE
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCE---EeCCCChHhEE
Confidence            8999999999999999974444443322  22777789999988          77   99999999984

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.85  E-value=2.4e-20  Score=139.99  Aligned_cols=128  Identities=16%  Similarity=0.131  Sum_probs=107.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .++|.+.+.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+..+..+.+||||+++++.+..    .+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~----~~   84 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE----DD   84 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE----TT
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcC-CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec----CC
Confidence            4579999999999999999999987 7899999998763   23456678899888887689999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++..     ...+....  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dikp~NIl  147 (289)
T 1x8b_A           85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL---VHMDIKPSNIF  147 (289)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCE---eecCCCHHHEE
Confidence            99999999999999999862     33444332  22377788999999998   99999999985

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.84  E-value=9.4e-21  Score=146.59  Aligned_cols=126  Identities=16%  Similarity=0.153  Sum_probs=105.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+..    .
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~   81 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYK-TQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITT----P   81 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEEC----S
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe----C
Confidence            3579999999999999999999987 88999999987532    1235688999999999 99999999999998    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++||||+ +|+|.+++. .........  ...+...+|+|+|..|+   +|+||||+||.
T Consensus        82 ~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vH~Dlkp~NIl  140 (336)
T 3h4j_B           82 TDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI---VHRDLKPENLL  140 (336)
T ss_dssp             SEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCSTTTEE
T ss_pred             CEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCchhhEE
Confidence            8899999999 689999886 333444332  23377888999999998   99999999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.84  E-value=4.9e-20  Score=139.64  Aligned_cols=132  Identities=20%  Similarity=0.188  Sum_probs=104.5

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEe----cCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALD----TQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ......|++.+.||+|+||.||.+.+    .. .+..+|+|.+....  .....+.+|+.++..+ +|+||+++++.+..
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDN-TGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTE   94 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSS-CSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCc-cCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEec
Confidence            33455699999999999999999983    44 67899999987643  3456789999999999 99999999999977


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..  ...++++|||+++|+|.+++.  ....+.....  ..+...+|+++|..++   +|+||||+||.
T Consensus        95 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dikp~Nil  158 (302)
T 4e5w_A           95 DG--GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVL  158 (302)
T ss_dssp             -----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             CC--CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCc---ccCCCchheEE
Confidence            21  366899999999999999995  3344443322  2277788999999998   99999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.1e-20  Score=148.98  Aligned_cols=131  Identities=17%  Similarity=0.193  Sum_probs=107.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ....+|.+.+.||+|+||.||+|.+.. ++..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+....  .
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~--~   81 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKK-TGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT--T   81 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT--T
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCC--C
Confidence            345679999999999999999999987 88999999987643  2456678999999999 9999999999987621  3


Q ss_pred             ceEEEEEecCCCCChhhhcCCCC----CChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDE----LDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++||||+++|+|.+++....    .......  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  144 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI---VHRNIKPGNIM  144 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE---EECCcCHHHEE
Confidence            47899999999999999997321    3433322  2277788999999998   99999999983

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.84  E-value=2.7e-20  Score=139.04  Aligned_cols=128  Identities=22%  Similarity=0.335  Sum_probs=103.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .++|++.+.||+|+||.||++.+   .+..+|+|.+....     .....+.+|+.+++.+ +|+||+++++.+..    
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   77 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLK----   77 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE---TTEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECC----
T ss_pred             hhheeeeeeeccCCCeEEEEEEE---cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEec----
Confidence            45799999999999999999997   46789999987542     2346788999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..+++|||+++|+|.+++.....+.....  ..+...+|+|+|..++.+++|+|+||+||.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil  140 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL  140 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEE
T ss_pred             CCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEE
Confidence            7889999999999999999975545543332  227778899999999666699999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.84  E-value=2e-20  Score=141.43  Aligned_cols=125  Identities=19%  Similarity=0.280  Sum_probs=103.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|+||.||++.+.. ++..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+..    ...
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHS----DKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE----TTE
T ss_pred             CCceeeeEecCCCCeEEEEEEECC-CCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEe----CCE
Confidence            469999999999999999999988 88999999997542   3456788999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++ ++.+.+.  ....+.....  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        76 ~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---vH~dikp~Nil  133 (292)
T 3o0g_A           76 LTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLKPQNLL  133 (292)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            9999999985 5555553  3344443322  2377788999999988   99999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.84  E-value=1.1e-20  Score=152.45  Aligned_cols=129  Identities=17%  Similarity=0.223  Sum_probs=108.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+.++|.+.+.||+|+||.||+|.+.. ++..+|+|.+....   .....+.+|+.+++.+ +||||+++++.+..    
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~----   92 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILED----   92 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETT-TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECC-CCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEc----
Confidence            345689999999999999999999987 78999999986532   2456789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||+++|+|.+.+. .........  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dlkp~Nil  153 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI---VHRDLKPENIL  153 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCchHHEE
Confidence            789999999999999999886 333443332  23377789999999998   99999999984

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.84  E-value=1.5e-20  Score=144.84  Aligned_cols=133  Identities=17%  Similarity=0.196  Sum_probs=108.5

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .+....++|.+.+.||+|+||.||++.+..    ..+..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~  119 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVC  119 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE
Confidence            345667789999999999999999999863    03478999998764  33456789999999999 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCC-------------------------CCCChhhH--hhhhhHHHHHHHHhcCC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKP-------------------------DELDLDNL--QDCGDRYELGYVIGSGV  160 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~-------------------------~~~~~~~~--~~~~~~~~l~~lh~~~i  160 (176)
                      ..    .+.+++||||+++|+|.+++..                         ...+....  ...++..+|.|+|..++
T Consensus       120 ~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i  195 (343)
T 1luf_A          120 AV----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  195 (343)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cc----CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            88    7889999999999999999862                         12333222  22367778999999998


Q ss_pred             CccccccCCCCCcc
Q psy9091         161 CADVYEALDTQNVT  174 (176)
Q Consensus       161 ~~~v~~~~~~~nv~  174 (176)
                         +|+||||+||.
T Consensus       196 ---vH~Dlkp~NIl  206 (343)
T 1luf_A          196 ---VHRDLATRNCL  206 (343)
T ss_dssp             ---CCSCCSGGGEE
T ss_pred             ---ecCCCCcceEE
Confidence               99999999984

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.84  E-value=2.3e-20  Score=139.90  Aligned_cols=129  Identities=19%  Similarity=0.214  Sum_probs=108.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +..++|.+.+.||+|+||.||++.+.. .+..+++|.+.... .....+.+|+.+++.+ +|+||+++++.+..    ..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~   79 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKG-TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFED----NT   79 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----SS
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCC-CCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEec----CC
Confidence            345679999999999999999999987 78899999987642 3456789999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||+++++|.+++. .........  ...+...+|+|+|..|+   +|+|++|+||.
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~dlkp~Nil  138 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV---AHRDLKPENFL  138 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCCCCHHHEE
Confidence            8999999999999999886 333343332  22377788999999998   99999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.84  E-value=7.5e-21  Score=148.60  Aligned_cols=130  Identities=15%  Similarity=0.138  Sum_probs=105.3

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEec-----CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDT-----QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      ....++|.+.+.||+|+||.||+|.+.     . .+..+|+|.++..  ......+.+|+.++..+ +|+||+++++.+.
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~  144 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP-SPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSL  144 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCC-cceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEe
Confidence            344568999999999999999999953     3 4568999998753  34556788999999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCC--------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKP--------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~--------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    ....++||||+++|+|.+++..        ........  ...++..+|+|+|..|+   +|+||||+||.
T Consensus       145 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~NIl  213 (367)
T 3l9p_A          145 Q----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCL  213 (367)
T ss_dssp             S----SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             c----CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChhhEE
Confidence            8    7788999999999999999862        11332222  22377788999999998   99999999984

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.84  E-value=3.3e-20  Score=140.85  Aligned_cols=130  Identities=22%  Similarity=0.410  Sum_probs=110.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+.+.|.+.+.||+|+||.||+|.+.. .+..+|+|.+....  .....+.+|+.++..+ +|+||+++++.+..    
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----   91 (303)
T 3a7i_A           18 ADPEELFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLK----   91 (303)
T ss_dssp             ECGGGTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----
T ss_pred             CChHHHHHHhhhhcccCCeEEEEEEECC-CCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEec----
Confidence            3455679999999999999999999987 78899999997642  3567789999999999 99999999999998    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||+++++|.+++.....+......  .+...+|.++|..|+   +|+||+|+||.
T Consensus        92 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  151 (303)
T 3a7i_A           92 DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVL  151 (303)
T ss_dssp             TTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCChheEE
Confidence            78999999999999999999755555444322  267778999999998   99999999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=1.8e-20  Score=146.81  Aligned_cols=126  Identities=16%  Similarity=0.167  Sum_probs=99.8

Q ss_pred             CCeEE--eeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYEL--GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~--~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.|.+  .+.||+|+||.||+|.+.. ++..+|+|.+.... .....+.+|+.++..+ +|+||+++++.+..    .+.
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~----~~~  160 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETA-TGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFES----KND  160 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SSE
T ss_pred             cceeeecceEEecCcCEEEEEEEEcC-CCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEE----CCE
Confidence            34555  5789999999999999987 78999999998753 3566789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++..  ........  ...+++.+|+|+|..++   +|+||||+||.
T Consensus       161 ~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  219 (373)
T 2x4f_A          161 IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI---LHLDLKPENIL  219 (373)
T ss_dssp             EEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCCHHHEE
Confidence            9999999999999998852  22333222  22377788999999998   99999999984

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.84  E-value=2.7e-20  Score=139.66  Aligned_cols=131  Identities=16%  Similarity=0.237  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +.|..+.+.|++.+.||+|+||.||++.+..  +..+|+|.+.........+.+|+.+++.+ +|+||+++++.+..   
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~---   79 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG--HTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ---   79 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS---
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcC--CcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEcC---
Confidence            4467777899999999999999999999754  67899999887654567789999999999 99999999998754   


Q ss_pred             CcceEEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +..+++|||+++|+|.+++...   ........  ..+.+.+|+++|..|+   +|+||+|+||.
T Consensus        80 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dikp~Nil  141 (279)
T 1qpc_A           80 --EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANIL  141 (279)
T ss_dssp             --SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             --CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHhhEE
Confidence              5689999999999999999632   33433322  2377788999999998   99999999984

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.84  E-value=2.4e-20  Score=152.42  Aligned_cols=133  Identities=18%  Similarity=0.214  Sum_probs=110.2

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ..+.|....+.|++.+.||+|+||.||++.+..  +..||+|.+.........+.+|+.+++.+ +|+||+++++.+.. 
T Consensus       258 ~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-  333 (535)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSEEEEEEEETT--TEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-
T ss_pred             CccceecchhhhhhheecccCCCeEEEEEEECC--CceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-
Confidence            345677778899999999999999999999865  46799999987554556799999999999 99999999998754 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          +.+++||||+++|+|.++|..   ........  ...+++.+|+|||.+++   ||+||||+||.
T Consensus       334 ----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vHrDlkp~NIl  395 (535)
T 2h8h_A          334 ----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANIL  395 (535)
T ss_dssp             ----SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ----ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCHhhEE
Confidence                668999999999999999972   22343332  22377788999999998   99999999984

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.84  E-value=5.3e-20  Score=139.17  Aligned_cols=131  Identities=18%  Similarity=0.188  Sum_probs=107.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----------hhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----------EFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----------~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      ....++|.+.+.||+|+||.||+|.+.. ++..+|+|.+....          .....+.+|+.++..+.+||||+++++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   91 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcC-cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence            4556789999999999999999999987 88999999987531          234567899999999845999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..    ....++||||+++|+|.+++. ....+....  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus        92 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  156 (298)
T 1phk_A           92 TYET----NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI---VHRDLKPENIL  156 (298)
T ss_dssp             EEEC----SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eecc----CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcceEE
Confidence            9988    789999999999999999987 233333332  22377788999999998   99999999984

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.84  E-value=2.2e-20  Score=143.71  Aligned_cols=124  Identities=15%  Similarity=0.196  Sum_probs=103.6

Q ss_pred             CeEEe---eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELG---YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~---~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      +|.+.   +.||+|+||.||+|.+.. ++..+|+|.+...  ....+.+|+.++..+.+||||+++++.+..    ....
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~   81 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKK-SNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHD----QLHT   81 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETT-TCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----SSEE
T ss_pred             ccccccCCCccccCCCeEEEEEEECC-CCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc----CCEE
Confidence            46664   789999999999999987 7899999998754  235677899999998559999999999998    7899


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+||||+++|+|.+++. ....+.....  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---vH~Dlkp~NIl  138 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV---VHRDLKPENLL  138 (325)
T ss_dssp             EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---eecCCCHHHEE
Confidence            99999999999999997 3344443332  2377788999999998   99999999984

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.84  E-value=4.1e-20  Score=140.68  Aligned_cols=126  Identities=14%  Similarity=0.192  Sum_probs=106.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|+||.||+|.+.. ++..+|+|.+....   .....+.+|+.++..+ +|+||+++++.+..    ...
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~   76 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRD-TGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRR----KRR   76 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----TTE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCC-CCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeec----CCe
Confidence            569999999999999999999987 78999999886542   2356688999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++||||+++++|.+++. ....+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~i---vH~dlkp~Nil  134 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC---IHRDVKPENIL  134 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCC---cCCCCChhhEE
Confidence            999999999999998876 333443332  22377778999999998   99999999984

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.84  E-value=2.1e-20  Score=143.88  Aligned_cols=129  Identities=19%  Similarity=0.266  Sum_probs=104.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....++|.+.+.||+|+||.||++.+.. .+..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+..   
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~---  104 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTV-TNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHH---  104 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETT-TTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEE---
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECC-CCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEec---
Confidence            4455689999999999999999999988 88999999997542   2345678999999999 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+++||||++ |+|.+++. .........  ...+++.+|+|+|..++   +|+||||+||.
T Consensus       105 -~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~i---vH~Dlkp~NIl  164 (329)
T 3gbz_A          105 -NHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC---LHRDLKPQNLL  164 (329)
T ss_dssp             -TTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             -CCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ECCCCCHHHEE
Confidence             789999999998 59999987 334444332  23377888999999998   99999999984

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=3.3e-20  Score=138.14  Aligned_cols=128  Identities=18%  Similarity=0.160  Sum_probs=107.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...+.|++.+.||+|+||.||.+.+..  +..+|+|.+.........+.+|+.++..+ +||||+++++.+..    .+.
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   77 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLE----QAP   77 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECS----SSS
T ss_pred             EchhheeeeeEecCCCceeEEEEEecC--CCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcc----CCC
Confidence            344679999999999999999999864  67899999987654556789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++|+|.+++..  ...+.....  ..+...+|.++|..++   +|+|++|+||.
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~Nil  136 (267)
T 3t9t_A           78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCL  136 (267)
T ss_dssp             CEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCCGGGEE
T ss_pred             eEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCchheEE
Confidence            9999999999999999972  334443322  2267778999999998   99999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.84  E-value=2.7e-20  Score=141.10  Aligned_cols=130  Identities=19%  Similarity=0.279  Sum_probs=107.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++.++|.+.+.||+|+||.||.+.+.. ++..+++|.+.... .....+..|+.++..+ +||||+++++.+..    .
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   88 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKE-TGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYH----D   88 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETT-TCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----C
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcC-CCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeee----C
Confidence            4566789999999999999999999987 78899999987643 3466789999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++++|||+++|+|.+++.  ....+.....  ..+...+|.|+|..|+   +|+||+|+||.
T Consensus        89 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil  149 (302)
T 2j7t_A           89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI---IHRDLKAGNVL  149 (302)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCHHHEE
Confidence            88999999999999999876  3334443322  2267778999999998   99999999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.84  E-value=5e-20  Score=144.50  Aligned_cols=134  Identities=21%  Similarity=0.304  Sum_probs=108.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      .+....++|.+.+.||+|+||.||+|.+..      +.+..+|+|.+...  ......+.+|+.++..+.+|+||+++++
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            345666789999999999999999998642      02357999998764  3455678999999999878999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhHh--hhhhHHHHHHHHhcCCCccccc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNLQ--DCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      .+..    .+.+++||||+++|+|.+++...                 ........  ..+++.+|+|+|..++   +|+
T Consensus       143 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~  215 (382)
T 3tt0_A          143 ACTQ----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHR  215 (382)
T ss_dssp             EECS----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             eecc----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCE---ecC
Confidence            9988    78899999999999999998621                 13333322  2277788999999998   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      ||||+||.
T Consensus       216 Dlkp~NIl  223 (382)
T 3tt0_A          216 DLAARNVL  223 (382)
T ss_dssp             CCCGGGEE
T ss_pred             CCCcceEE
Confidence            99999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=2.4e-20  Score=153.20  Aligned_cols=129  Identities=12%  Similarity=0.045  Sum_probs=108.0

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+.+   
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~-tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~---  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYET---  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC---
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEee---
Confidence            344679999999999999999999988 88999999987532    2345678999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC-C--CCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP-D--ELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~-~--~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+|+||||++||+|.+++.. .  ..+......  .++..+|+|+|..|+   |||||||+||.
T Consensus       256 -~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI---vHrDLKPeNIL  318 (576)
T 2acx_A          256 -KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI---VYRDLKPENIL  318 (576)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             -CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eccCCchheEE
Confidence             7899999999999999998862 2  244433322  377788999999998   99999999984

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.84  E-value=8.2e-21  Score=151.81  Aligned_cols=128  Identities=18%  Similarity=0.242  Sum_probs=99.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+.|.+.+.||+|+||.||++.+.. ++..+|+|.+...    ......+..|+.++..+ +||||+.+++.+..    
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~----  219 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKA-TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQT----  219 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEE----
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcC-CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEee----
Confidence            34579999999999999999999988 8899999998753    22345678899999998 99999999999998    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+++||||+++|+|.+++. ....+.....  ..+++.+|+|+|. .|+   ||+||||+||.
T Consensus       220 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~gi---iHrDlkp~NIl  281 (446)
T 4ejn_A          220 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV---VYRDLKLENLM  281 (446)
T ss_dssp             TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCC---CCCCCCGGGEE
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCE---EECCCCHHHEE
Confidence            789999999999999999986 3334443332  2377788999998 888   99999999984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.84  E-value=2.6e-20  Score=142.71  Aligned_cols=129  Identities=17%  Similarity=0.204  Sum_probs=107.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ...+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....       .....+.+|+.++..+ .||||+++++.+..
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   86 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYEN   86 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECC-CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEec
Confidence            344679999999999999999999987 78899999987642       1356789999999999 99999999999988


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCC-CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKP-DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          ...++++|||+++|+|.+++.. ...+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        87 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---vH~dikp~NIl  147 (321)
T 2a2a_A           87 ----RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI---AHFDLKPENIM  147 (321)
T ss_dssp             ----SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ----CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCChHHEE
Confidence                7889999999999999999963 22333222  22267778999999988   99999999984

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.84  E-value=2.7e-20  Score=140.43  Aligned_cols=129  Identities=19%  Similarity=0.228  Sum_probs=108.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ...++|.+.+.||+|+||.||++.+.. .+..+++|.+....  .....+.+|+.+++.+ +||||+++++.+..    .
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~   92 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERS-SGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFED----Y   92 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----S
T ss_pred             ChhhheeecceeccCCCeEEEEEEEcc-CCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheec----C
Confidence            345679999999999999999999987 78899999987643  2457789999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...++||||+++|+|.+++.     .........  ...+...+|+|+|..|+   +|+||||+||.
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~dikp~NIl  156 (285)
T 3is5_A           93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV---VHKDLKPENIL  156 (285)
T ss_dssp             SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCE---EECCCCHHHEE
Confidence            88999999999999999884     133443332  22377788999999998   99999999984

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.84  E-value=8.8e-20  Score=137.66  Aligned_cols=135  Identities=21%  Similarity=0.246  Sum_probs=109.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      .......|.+.+.||+|+||.||+|.+.. .+..+++|.+...   ......+.+|+.+++.+ +||||+++++.+....
T Consensus        21 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           21 MSNDGRFLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTV   98 (290)
T ss_dssp             ECTTSCEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEES
T ss_pred             cccCceeEEeeeeccCCCCeEEEEeEecC-CceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecccc
Confidence            34556679999999999999999999987 7889999998753   34566789999999999 9999999999987633


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                      .....+++||||+++|+|.+++.. .........  ..+...+|.|+|..+  +   +|+||+|+||.
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i---~H~dikp~Nil  163 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPI---IHRDLKCDNIF  163 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCC---CCSCCCGGGEE
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCE---EECCCCHHHEE
Confidence            335679999999999999999972 334443322  237778899999998  7   99999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=4e-20  Score=148.11  Aligned_cols=131  Identities=21%  Similarity=0.230  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +.|....+.|++.+.||+|+||.||++.+   .+..+|+|.++... ....+.+|+.+++.+ +|+||+++++.+...  
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~---~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--  258 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEE--  258 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECT--
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEe---cCCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcC--
Confidence            44566677899999999999999999988   45789999997654 446789999999999 999999999998762  


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+++||||+++|+|.+++..   ........  ...++..+|+|+|..++   +|+||||+||.
T Consensus       259 -~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHrDlkp~Nil  321 (450)
T 1k9a_A          259 -KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVL  321 (450)
T ss_dssp             -TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             -CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCHhhEE
Confidence             3479999999999999999972   12333322  22377788999999998   99999999984

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.83  E-value=2.2e-20  Score=143.10  Aligned_cols=135  Identities=17%  Similarity=0.309  Sum_probs=110.0

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +.+..+....++|.+.+.||+|+||.||++.+.  .+..+|+|.+.... .....+.+|+.+++.+ +||||+++++.+.
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  105 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCD  105 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECC
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEEC--CCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEc
Confidence            445556677788999999999999999999974  47889999887643 3566789999999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCCCC-----CChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKPDE-----LDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+..++||||+++|+|.+++....     ......  ...+...+|+|+|..|+   +|+||||+||.
T Consensus       106 ~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---vH~dlkp~Nil  171 (321)
T 2qkw_B          106 E----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI---IHRDVKSINIL  171 (321)
T ss_dssp             C----TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCSTTEE
T ss_pred             C----CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCe---ecCCCCHHHEE
Confidence            8    788999999999999999996321     232222  22266778999999988   99999999984

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.83  E-value=1.4e-20  Score=147.50  Aligned_cols=127  Identities=19%  Similarity=0.233  Sum_probs=104.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEec---CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDT---QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+|.+.+.||+|+||.||+|.+.   . .+..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+..    
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----  117 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSK-KEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTK----  117 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTS-CBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS----
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCC-CceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEee----
Confidence            347999999999999999999876   3 4567999998764  34566799999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||+++|+|.+++...  .......  ...++..+|+|+|..++   +|+||||+||.
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  179 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNIL  179 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCCCcceEE
Confidence            78899999999999999999732  3333332  22377788999999998   99999999984

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.83  E-value=4.7e-20  Score=139.55  Aligned_cols=129  Identities=16%  Similarity=0.201  Sum_probs=101.5

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHh--ccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRD--LSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~--l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ...++|++.+.||+|+||.||++.+   .+..+|+|.+....  ...+..|..++..  + +||||+++++.+.......
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~~~~   78 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRD--EKSWFRETELYNTVML-RHENILGFIASDMTSRHSS   78 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGGG--HHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEETTE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEecccc--chhhHHHHHHHHHhhc-cCcCeeeEEEeeccccCCC
Confidence            3456799999999999999999987   46889999987543  3445566666665  6 9999999999876633335


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHH--------hcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVI--------GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh--------~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||+++|+|.++++....+.....  ..+...+|+|+|        ..++   +|+||||+||.
T Consensus        79 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i---vH~Dlkp~Nil  145 (301)
T 3q4u_A           79 TQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI---AHRDLKSKNIL  145 (301)
T ss_dssp             EEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEE---ECSCCCGGGEE
T ss_pred             ceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCe---ecCCCChHhEE
Confidence            679999999999999999975555544332  227778899999        7777   99999999984

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.83  E-value=6.1e-20  Score=139.52  Aligned_cols=128  Identities=18%  Similarity=0.216  Sum_probs=105.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ..+.|.+.+.||+|+||.||.+.+.. .+..+|+|.+..... ....+.+|+.++..+ +||||+++++.+..    .+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   80 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYES----TTH   80 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEEC----SSE
T ss_pred             hhccceeeeeccCCCCceEEEEEECC-CCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhccc----CCE
Confidence            34579999999999999999999987 788999999986532 345688999999999 99999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++|+|.+++. .........  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dikp~NIl  138 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI---VHRDLKPENLL  138 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCSCCGGGCE
T ss_pred             EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEE
Confidence            999999999999999986 333333332  22377778999999998   99999999984

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.83  E-value=3.8e-20  Score=140.88  Aligned_cols=133  Identities=19%  Similarity=0.309  Sum_probs=107.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .+.....+|.+.+.||+|+||.||++.+..    ..+..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~   95 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGAC   95 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEE
Confidence            345566789999999999999999998732    03478999998764  34556789999999999 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCC-CC------------------------CChhhH--hhhhhHHHHHHHHhcCC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKP-DE------------------------LDLDNL--QDCGDRYELGYVIGSGV  160 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~------------------------~~~~~~--~~~~~~~~l~~lh~~~i  160 (176)
                      ..    .+.++++|||+++|+|.+++.. ..                        ......  ...+...+|.|+|..++
T Consensus        96 ~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  171 (314)
T 2ivs_A           96 SQ----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL  171 (314)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ec----CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            88    7889999999999999999862 11                        222221  22367778999999998


Q ss_pred             CccccccCCCCCcc
Q psy9091         161 CADVYEALDTQNVT  174 (176)
Q Consensus       161 ~~~v~~~~~~~nv~  174 (176)
                         +|+||||+||.
T Consensus       172 ---vH~dikp~NIl  182 (314)
T 2ivs_A          172 ---VHRDLAARNIL  182 (314)
T ss_dssp             ---ECCCCSGGGEE
T ss_pred             ---cccccchheEE
Confidence               99999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.83  E-value=6.9e-20  Score=138.49  Aligned_cols=129  Identities=18%  Similarity=0.217  Sum_probs=108.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....+|.+.+.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.+++.+ +|+||+++++.+..   
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~---   86 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDAD-TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFED---   86 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECC-CCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeecc---
Confidence            445679999999999999999999987 7889999998753    23456788999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.++++|||+++++|.+++. ....+.....  ..+...+|+|+|..|+   +|+||+|+||.
T Consensus        87 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dl~p~Nil  147 (294)
T 2rku_A           87 -NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV---IHRDLKLGNLF  147 (294)
T ss_dssp             -SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             -CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCChHhEE
Confidence             788999999999999999886 3334433322  2377778999999988   99999999984

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.83  E-value=6.1e-20  Score=141.39  Aligned_cols=136  Identities=18%  Similarity=0.275  Sum_probs=108.4

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecC------CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCccee
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      ...+....++|.+.+.||+|+||.||++.+..      ..+..+|+|.+...  ......+.+|+.++..+.+||||+++
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            34456667889999999999999999998742      03468999998764  34566789999999998789999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADV  164 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v  164 (176)
                      ++.+..    .+.+++||||+++|+|.+++....                 ......  ...+...+|+|+|..|+   +
T Consensus       107 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---v  179 (334)
T 2pvf_A          107 LGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---I  179 (334)
T ss_dssp             EEEECS----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTE---E
T ss_pred             EEEEcc----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe---e
Confidence            999988    788999999999999999986321                 222222  22367778999999998   9


Q ss_pred             cccCCCCCcc
Q psy9091         165 YEALDTQNVT  174 (176)
Q Consensus       165 ~~~~~~~nv~  174 (176)
                      |+||||+||.
T Consensus       180 H~Dlkp~NIl  189 (334)
T 2pvf_A          180 HRDLAARNVL  189 (334)
T ss_dssp             CSCCSGGGEE
T ss_pred             CCCCccceEE
Confidence            9999999984

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.83  E-value=4.2e-20  Score=141.27  Aligned_cols=136  Identities=13%  Similarity=0.185  Sum_probs=109.9

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEec-----CCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcce
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDT-----QNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPD  102 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~  102 (176)
                      ...+.+....++|.+.+.||+|+||.||+|.+.     . .+..+|+|.+....  .....+.+|+.+++.+ +|+||++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~   92 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDE-PETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVR   92 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTE-EEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCC
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCC-CceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEee
Confidence            345566777789999999999999999999875     2 35689999987542  3455688999999999 9999999


Q ss_pred             eceeEEeccCCcceEEEEEecCCCCChhhhcCC-----------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCC
Q psy9091         103 FFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP-----------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALD  169 (176)
Q Consensus       103 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~  169 (176)
                      +++.+..    .+..++||||+++|+|.+++..           ........  ...+...+|.++|..|+   +|+|||
T Consensus        93 ~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dik  165 (322)
T 1p4o_A           93 LLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLA  165 (322)
T ss_dssp             EEEEECS----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC---BCSCCS
T ss_pred             eEEEEcc----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCc
Confidence            9999988    7889999999999999999852           12232222  22367778999999998   999999


Q ss_pred             CCCcc
Q psy9091         170 TQNVT  174 (176)
Q Consensus       170 ~~nv~  174 (176)
                      |+||.
T Consensus       166 p~NIl  170 (322)
T 1p4o_A          166 ARNCM  170 (322)
T ss_dssp             GGGEE
T ss_pred             cceEE
Confidence            99984

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.83  E-value=9.9e-20  Score=136.19  Aligned_cols=126  Identities=17%  Similarity=0.274  Sum_probs=106.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ++|++.+.||+|+||.||.+.+.. .+..+|+|.+....  .....+.+|+.+++.+ +|+||+++++.+..    .+..
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~   80 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRRE----GNIQ   80 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEE----TTEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECC-CCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEc----CCEE
Confidence            469999999999999999999987 78899999987542  3456789999999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+++|+|.+++.. ...+.....  ..+...+|.++|..|+   +|+|++|+||.
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~Nil  137 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI---THRDIKPENLL  137 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCChHHEE
Confidence            999999999999999973 334443322  2277778999999998   99999999984

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.83  E-value=4.4e-20  Score=143.47  Aligned_cols=127  Identities=18%  Similarity=0.269  Sum_probs=107.7

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .++|.+.+.||+|+||.||++.+.. .+..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+..    .+.
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~  105 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS----DGE  105 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEE----TTE
T ss_pred             cccceeeeeecCCCCeEEEEEEECC-CCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEE----CCE
Confidence            4579999999999999999999987 7889999998764  34566789999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++. .........  ...+...+|.|+|.. |+   +|+||||+||.
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i---~H~dlkp~Nil  164 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI---MHRDVKPSNIL  164 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCC---CCSCCSGGGEE
T ss_pred             EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCE---EcCCccHHHEE
Confidence            999999999999999987 333443332  223677789999985 88   99999999984

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.83  E-value=1.9e-20  Score=156.75  Aligned_cols=128  Identities=14%  Similarity=0.177  Sum_probs=108.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++|.+++.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+.+|++|+.+++.+.+    .
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~-~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----~  414 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----M  414 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESS-SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC----S
T ss_pred             ccceEEEEEEccCCCEEEEEEEECC-CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe----C
Confidence            4579999999999999999999988 88899999987531    2345678899999887689999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||+++|+|.+++. ....+......  .+++.+|+|||..+|   |||||||+||.
T Consensus       415 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gI---iHrDLKp~NIL  474 (674)
T 3pfq_A          415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI---IYRDLKLDNVM  474 (674)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSE---ECCCCCSTTEE
T ss_pred             CEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EeccCChhhEE
Confidence            89999999999999999997 34455444333  377889999999998   99999999984

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.83  E-value=4.9e-20  Score=140.19  Aligned_cols=133  Identities=19%  Similarity=0.261  Sum_probs=108.3

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEe-----cCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALD-----TQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      .+..+.++|.+.+.||+|+||.||++.+     .. .+..+|+|.+....  .....+.+|+.++..+.+||||+++++.
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTT-CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccc-hhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            3566677899999999999999999985     23 45789999997642  3456789999999998789999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCC-------------------CCChhhH--hhhhhHHHHHHHHhcCCCcccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPD-------------------ELDLDNL--QDCGDRYELGYVIGSGVCADVY  165 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-------------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~  165 (176)
                      +..    .+..+++|||+++|+|.+++...                   ..+....  ...+.+.+|.|+|..|+   +|
T Consensus        96 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H  168 (313)
T 1t46_A           96 CTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---IH  168 (313)
T ss_dssp             ECS----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC---CC
T ss_pred             Eec----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCe---ec
Confidence            988    78899999999999999998621                   1333222  22266778999999998   99


Q ss_pred             ccCCCCCcc
Q psy9091         166 EALDTQNVT  174 (176)
Q Consensus       166 ~~~~~~nv~  174 (176)
                      +||||+||.
T Consensus       169 ~dlkp~Nil  177 (313)
T 1t46_A          169 RDLAARNIL  177 (313)
T ss_dssp             SCCSGGGEE
T ss_pred             CCCccceEE
Confidence            999999984

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=2e-20  Score=144.35  Aligned_cols=131  Identities=24%  Similarity=0.287  Sum_probs=107.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      .....++|.+.+.||+|+||.||++.+.. .+..+|+|.+...      ......+.+|+.+++.+ +||||+++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~   98 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQ-TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYE   98 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECC-CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhc
Confidence            34556789999999999999999999987 8889999998653      23456789999999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCC---CC--------------------------------------CChhh--Hhh
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKP---DE--------------------------------------LDLDN--LQD  145 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~--------------------------------------~~~~~--~~~  145 (176)
                      .    .+..++||||+++|+|.+++..   ..                                      .+...  ...
T Consensus        99 ~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  174 (345)
T 3hko_A           99 D----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM  174 (345)
T ss_dssp             C----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred             c----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence            8    7899999999999999999841   00                                      00101  122


Q ss_pred             hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         146 CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       146 ~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+.+|+|+|..++   +|+||||+||.
T Consensus       175 ~qi~~~l~~LH~~~i---vH~Dlkp~NIl  200 (345)
T 3hko_A          175 RQIFSALHYLHNQGI---CHRDIKPENFL  200 (345)
T ss_dssp             HHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             HHHHHHHHHHHHCCc---cccCCChhhEE
Confidence            366778999999988   99999999984

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.83  E-value=4.1e-20  Score=151.07  Aligned_cols=128  Identities=14%  Similarity=0.077  Sum_probs=107.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+.|.+.+.||+|+||.||++.+.. ++..+|+|.+....    .....+..|..++..+ +||||+++++.+..    
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~----  256 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKA-TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFET----  256 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC----
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEee----
Confidence            34679999999999999999999987 88999999997542    2345788999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCCC-----CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPD-----ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+|+||||++||+|.+++...     ........  ..++..+|.|+|..|+   +||||||+||.
T Consensus       257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI---vHrDLKP~NIL  321 (543)
T 3c4z_A          257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVL  321 (543)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC---cccCCChHHEE
Confidence            78899999999999999988521     23443332  3377889999999998   99999999984

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.83  E-value=7.2e-20  Score=137.50  Aligned_cols=126  Identities=20%  Similarity=0.240  Sum_probs=106.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ++|.+.+.||+|+||.||++.+.. ++..+|+|.+....       .....+.+|+.++..+ +|+||+++++.+..   
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~---   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFEN---   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC---
T ss_pred             hhhhhHHhhcccCceEEEEEEEcC-CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecC---
Confidence            469999999999999999999987 78899999987531       1356789999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ....+++|||+++++|.+++. ....+....  ...+...+|.++|..++   +|+||+|+||.
T Consensus        80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~Nil  140 (283)
T 3bhy_A           80 -KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI---AHFDLKPENIM  140 (283)
T ss_dssp             -SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             -CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCChHHEE
Confidence             788999999999999999986 233343332  22377788999999988   99999999984

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=2.9e-20  Score=142.95  Aligned_cols=137  Identities=17%  Similarity=0.178  Sum_probs=113.2

Q ss_pred             ccCCCCCCCCCCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          30 LDLDNLQDCGDRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      +.++....+.++|.+. +.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.++..+..|+||+++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKS-TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECC-CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            4556666777889988 899999999999999987 7899999998763   2345678999999999867799999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..    ...+++||||+++|+|.+++..   .........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        97 ~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~gi---vH~Dikp~NIl  163 (327)
T 3lm5_A           97 VYEN----TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI---VHLDLKPQNIL  163 (327)
T ss_dssp             EEEC----SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             EEEe----CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCcCChHHEE
Confidence            9988    7889999999999999999862   333433322  2277788999999998   99999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=4.2e-20  Score=143.97  Aligned_cols=129  Identities=17%  Similarity=0.145  Sum_probs=101.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEE-----ecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc--CCCCcceeceeEE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEAL-----DTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS--QHSNIPDFFGAYM  108 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~-----~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~  108 (176)
                      ....+.|.+.+.||+|+||.||+|.     ... .+..+|+|.+....  ...+..|..++..+.  .|+|++.+++.+.
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAK-NKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC--------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccc-cCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            3455789999999999999999994     444 57889999987653  345677788777772  2899999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC------CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK------PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+..++||||+++|+|.+++.      ....+....  ...+.+.+|+|+|..|+   |||||||+||.
T Consensus       138 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~i---vHrDiKp~NIl  204 (365)
T 3e7e_A          138 F----QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEI---IHGDIKPDNFI  204 (365)
T ss_dssp             C----SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCSGGGEE
T ss_pred             c----CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe---ecCCCCHHHEE
Confidence            8    788999999999999999995      223343332  23377888999999987   99999999984

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.83  E-value=1.9e-19  Score=137.07  Aligned_cols=129  Identities=18%  Similarity=0.235  Sum_probs=105.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....+|++.+.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.+++.+ +|+||+++++.+..   
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~---  103 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLL-DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIE---  103 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETT-TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEE---
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcC-CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEc---
Confidence            344579999999999999999999987 7889999998752    33566789999999999 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..+++|||+++|+|.+++.     ....+....  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus       104 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---~H~dl~p~NIl  168 (310)
T 2wqm_A          104 -DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV---MHRDIKPANVF  168 (310)
T ss_dssp             -TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             -CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe---eCCCCcHHHEE
Confidence             789999999999999999985     122333322  22377778999999998   99999999984

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=6.8e-20  Score=139.84  Aligned_cols=134  Identities=15%  Similarity=0.116  Sum_probs=106.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ....++|++.+.||+|+||.||++.+.. .+..+|+|.+... ......+.+|+.+++.+ +|+||+++++.+.......
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLH-DGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAK  102 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETT-TCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecC-CCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCC
Confidence            3445689999999999999999999987 7899999988654 34567789999999999 9999999999987422225


Q ss_pred             ceEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++|+|.+++..     ........  ...+...+|.|+|..++   +|+||+|+||.
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~dlkp~NIl  166 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY---AHRDLKPTNIL  166 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            689999999999999998852     23333332  22277778999999988   99999999984

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.83  E-value=3e-20  Score=142.85  Aligned_cols=126  Identities=17%  Similarity=0.250  Sum_probs=104.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .++|.+.+.||+|+||.||+|.+.. ++..+|+|.+..... ...+..|+.+++.+.+|+||+.+++.+..    ....+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~----~~~~~   81 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLY-TNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPC----GKYNA   81 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETT-TTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEE----TTEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECC-CCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEec----CCccE
Confidence            4679999999999999999999887 889999999875432 23578899999998789999999999988    78999


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+ +|+|.+++.  ..........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---iHrDlkp~Nil  137 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL---IYRDVKPENFL  137 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHee
Confidence            999999 899999987  3444443332  2277788999999988   99999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.83  E-value=7.5e-20  Score=145.80  Aligned_cols=132  Identities=20%  Similarity=0.238  Sum_probs=107.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-C
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-Q  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~  112 (176)
                      ...++|.+.+.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.... .
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKN-TEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTT
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECC-CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCC
Confidence            445679999999999999999999988 8899999999753   23456789999999999 9999999999987621 1


Q ss_pred             CcceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+|+||||++ |+|.+++.. .........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus       101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi---vHrDlkp~NIL  161 (432)
T 3n9x_A          101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI---IHRDLKPANCL  161 (432)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCHHHeE
Confidence            1267999999987 699999873 334443332  2377889999999998   99999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.83  E-value=4.2e-20  Score=138.71  Aligned_cols=126  Identities=18%  Similarity=0.313  Sum_probs=106.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|.+.+.||+|+||.||++.+.. .+..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+..    ..
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   82 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD----AT   82 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SS
T ss_pred             ccEEEeeEEecCCCeEEEEEEEcc-CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEec----CC
Confidence            569999999999999999999987 78899999986532    2345688999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++|+|.+++. ....+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---~H~dlkp~Nil  141 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHRDIKPENLL  141 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTC---EECCCCGGGEE
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecccCChHhEE
Confidence            8999999999999999986 233443332  22377788999999998   99999999984

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.83  E-value=5.7e-20  Score=140.43  Aligned_cols=128  Identities=17%  Similarity=0.215  Sum_probs=103.5

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +...++|++++.||+|+||.||++.+.  .+..+|+|.+....   .....+.+|+.+++.+ +||||+++++.+..   
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~---   90 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHS---   90 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECC---
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEcc---
Confidence            455678999999999999999999985  47889999987542   2346788999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+++||||++ |+|.+++..  .........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        91 -~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~Dikp~NIl  151 (311)
T 3niz_A           91 -ERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI---LHRDLKPQNLL  151 (311)
T ss_dssp             -SSCEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             -CCEEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCchHhEE
Confidence             788999999998 578777753  223333322  2377788999999998   99999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.83  E-value=7.4e-20  Score=138.26  Aligned_cols=130  Identities=18%  Similarity=0.272  Sum_probs=106.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--------
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--------  111 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--------  111 (176)
                      ++|.+.+.||+|+||.||.+.+.. .+..+|+|.+.........+.+|+.+++.+ +|||++++++.+....        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC----
T ss_pred             ccchhhheeccCCcEEEEEEEEcC-CCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcc
Confidence            469999999999999999999987 788999999987666667889999999999 9999999999875421        


Q ss_pred             -CCcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -QTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .....++++|||+++|+|.+++...  ..+....  ...+...+|+|+|..++   +|+||+|+||.
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---~H~dlkp~Nil  148 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI---IHRDLKPMNIF  148 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCe---ecccCCHHhEE
Confidence             1146799999999999999999622  2222221  23377788999999998   99999999984

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.83  E-value=7.4e-20  Score=137.22  Aligned_cols=127  Identities=17%  Similarity=0.305  Sum_probs=106.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+.+.||+|+||.||++.+.. .+..+|+|.+....    .....+.+|+.++..+ +||||+++++.+..    .
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   83 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIH-TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFED----S   83 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEEC----S
T ss_pred             cccceeeeeecCCCceEEEEEEEcc-CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEcc----C
Confidence            3569999999999999999999977 78899999987542    1246788999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..+++|||+++++|.+++..  ...+.....  ..+...+|.|+|..++   +|+||+|+||.
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  144 (278)
T 3cok_A           84 NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI---LHRDLTLSNLL  144 (278)
T ss_dssp             SEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSSCCGGGEE
T ss_pred             CeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            889999999999999999873  233433322  2277788999999998   99999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.83  E-value=7.9e-20  Score=137.98  Aligned_cols=124  Identities=19%  Similarity=0.242  Sum_probs=102.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++++.||+|+||.||++.+ . .+..+|+|.+....   .....+.+|+.+++.+ +||||+++++.+..    .+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~   74 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-N-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHT----KKR   74 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-T-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEEC----SSC
T ss_pred             ccchhhhhcccCCCEEEEEEEc-C-CCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEcc----CCe
Confidence            4699999999999999999998 4 57899999987542   2345688999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++++|||+++ +|.+++..  ...+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  132 (288)
T 1ob3_A           75 LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKPQNLL  132 (288)
T ss_dssp             EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEE
Confidence            9999999985 88888762  33333332  22377788999999998   99999999984

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.83  E-value=7e-20  Score=137.71  Aligned_cols=131  Identities=23%  Similarity=0.286  Sum_probs=105.1

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      +....++|++.+.||+|+||.||+|.+...  .+..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+.  
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~--   86 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT--   86 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC--
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc--
Confidence            455567899999999999999999998540  2356999988753  23456789999999999 9999999999874  


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+..++||||+++|+|.+++..  ...+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        87 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  148 (281)
T 1mp8_A           87 ---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---VHRDIAARNVL  148 (281)
T ss_dssp             ---SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ---cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccccHHHEE
Confidence               4678999999999999999972  234443322  2377788999999998   99999999984

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=5.3e-20  Score=142.01  Aligned_cols=133  Identities=20%  Similarity=0.265  Sum_probs=105.3

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      +..+.+.|.+.+.||+|+||.||+|.+..    ..+..+|+|.+....  .....+.+|+.++..+.+||||+++++.+.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            45566789999999999999999999721    034689999987542  345678999999999878999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCCCC------------------------CChhhH--hhhhhHHHHHHHHhcCCCc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKPDE------------------------LDLDNL--QDCGDRYELGYVIGSGVCA  162 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------------~~~~~~--~~~~~~~~l~~lh~~~i~~  162 (176)
                      .    .+.+++||||+++|+|.+++....                        .+....  ...+...+|+|+|..|+  
T Consensus       120 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i--  193 (344)
T 1rjb_A          120 L----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--  193 (344)
T ss_dssp             S----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE--
T ss_pred             e----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc--
Confidence            8    788999999999999999996321                        222221  22367778999999988  


Q ss_pred             cccccCCCCCcc
Q psy9091         163 DVYEALDTQNVT  174 (176)
Q Consensus       163 ~v~~~~~~~nv~  174 (176)
                       +|+||||+||.
T Consensus       194 -vH~Dikp~NIl  204 (344)
T 1rjb_A          194 -VHRDLAARNVL  204 (344)
T ss_dssp             -EETTCSGGGEE
T ss_pred             -ccCCCChhhEE
Confidence             99999999984

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.82  E-value=3.7e-20  Score=148.36  Aligned_cols=131  Identities=22%  Similarity=0.283  Sum_probs=97.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-CC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-QT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~~  113 (176)
                      ..++|.+.+.||+|+||.||+|.+.. ++..||+|.+...   ......+.+|+.++..+ +|+||+++++++.... ..
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKL-EKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC---CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTT
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECC-CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCccc
Confidence            44679999999999999999999987 8899999998653   23456789999999999 9999999999986532 22


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+|+||||++ |+|.+++. ..........  ..+++.+|+|+|..|+   |||||||+||.
T Consensus       129 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---iHrDlKp~NIL  188 (458)
T 3rp9_A          129 FDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGI---LHRDLKPANCL  188 (458)
T ss_dssp             CCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCc---CCCCCChhhEE
Confidence            467999999985 78998887 3334443332  3377889999999998   99999999984

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.82  E-value=3.6e-20  Score=138.00  Aligned_cols=128  Identities=13%  Similarity=0.119  Sum_probs=104.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..++|.+.+.||+|+||.||++.+   .+..+|+|.+...   ......+.+|+.++..+ +||||+++++.+....  .
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~--~   81 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPP--A   81 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTT--S
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEE---CCeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCC--C
Confidence            345799999999999999999998   4678999998764   23456789999999999 9999999999987721  2


Q ss_pred             ceEEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||+++|+|.+++...   ..+.....  ..+...+|+|+|..+  +   +|+|+||+||.
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i---~H~dikp~Nil  145 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLI---PRHALNSRSVM  145 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCC---TTCCCSGGGEE
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCce---ecCCCccceEE
Confidence            6789999999999999999732   23433322  227778899999988  7   99999999984

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.82  E-value=2e-19  Score=139.65  Aligned_cols=128  Identities=24%  Similarity=0.344  Sum_probs=105.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ++...|...+.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.++..+ +||||+++++.+..   
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~---  125 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLR---  125 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE---
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEcc-CCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEE---
Confidence            444579999999999999999999987 78999999987532    2345788999999999 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..++||||++ |+|.+++.  ....+....  ...+.+.+|+|+|..++   +|+||||+||.
T Consensus       126 -~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  186 (348)
T 1u5q_A          126 -EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNIL  186 (348)
T ss_dssp             -TTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCSGGGEE
T ss_pred             -CCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEE
Confidence             789999999998 68888775  333443332  22267778999999998   99999999984

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1.2e-19  Score=138.32  Aligned_cols=129  Identities=19%  Similarity=0.203  Sum_probs=107.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ...+.|.+.+.||+|+||.||++.+.. .+..+|+|.+...    ......+.+|+.++..+ +||||+++++.+..   
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~---  105 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTV-RERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEI---  105 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETT-TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE---
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcC-CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEee---
Confidence            344679999999999999999999987 7889999998754    22356788999999999 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.++++|||+++++|.+++. ....+....  ...+...+|+|+|..++   +|+||+|+||.
T Consensus       106 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dlkp~NIl  166 (309)
T 2h34_A          106 -DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA---THRDVKPENIL  166 (309)
T ss_dssp             -TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             -CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC---CcCCCChHHEE
Confidence             789999999999999999987 333443332  22377778999999998   99999999984

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.82  E-value=1.1e-19  Score=135.97  Aligned_cols=127  Identities=18%  Similarity=0.194  Sum_probs=106.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++|.+.+.||+|+||.||.+.+.. .+..+++|.+....    .....+.+|+.+++.+ +|+||+++++.+..    .
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   83 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVIST----P   83 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----S
T ss_pred             eccEEEEeeecCCCCeEEEEEEECC-CCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEec----C
Confidence            3579999999999999999999987 78899999987542    2355788999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+++++|.+++. .........  ...+...+|+++|..|+   +|+|++|+||.
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  143 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV---VHRDLKPENVL  143 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCS---SCCCCCGGGEE
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCChhhEE
Confidence            88999999999999999986 233333322  22377778999999998   99999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.82  E-value=9.5e-20  Score=143.47  Aligned_cols=126  Identities=21%  Similarity=0.259  Sum_probs=103.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccC-CCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQ-HSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~-h~niv~~~~~~~~~~~~~  114 (176)
                      ...|.+.+.||+|+||.||++.+..  +..+|+|.+...   ......+.+|+.++..+.. |+||+++++.+..    .
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~----~  128 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----D  128 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----S
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC--CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec----C
Confidence            4569999999999999999998753  778999998754   3356778999999999843 5999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||| +.+|+|.+++. ....+....  ...+++.+|.|+|..++   +||||||+||.
T Consensus       129 ~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---vHrDlkp~NIl  187 (390)
T 2zmd_A          129 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI---VHSDLKPANFL  187 (390)
T ss_dssp             SEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTC---CCCCCCGGGEE
T ss_pred             CEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHEE
Confidence            88999999 67899999987 333443222  23377888999999998   99999999984

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.82  E-value=1.1e-19  Score=139.36  Aligned_cols=128  Identities=20%  Similarity=0.212  Sum_probs=104.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .++|++.+.||+|+||.||++.+.. .+..+|+|.+....  ...+.+|+.++..+.+|+||+++++.+..+.  ....+
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--~~~~~  109 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINIT-NNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPV--SRTPA  109 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECSCC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTT--TCCEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECC-CCcEEEEEEecccc--hHHHHHHHHHHHHcCCCCCEEEeeeeeccCC--CCceE
Confidence            4579999999999999999999987 78899999987543  3568899999999945999999999997632  45689


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++|||+++++|.++++.-..........+.+.+|+|+|..|+   +|+||||+||.
T Consensus       110 lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dikp~Nil  162 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI---MHRDVKPHNVM  162 (330)
T ss_dssp             EEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEE
Confidence            999999999999998531111111223377889999999998   99999999984

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.82  E-value=9.6e-20  Score=139.54  Aligned_cols=126  Identities=20%  Similarity=0.279  Sum_probs=101.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      .++|.+.+.||+|+||.||++.+.. ++..+|+|.+....         .....+.+|+.+++.+ +|+||+++++.+..
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEES
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcC-CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcC
Confidence            3579999999999999999999987 88999999986532         1223478899999999 99999999999866


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                           +..++||||+++|+|.+++. .........  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        87 -----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~NIl  146 (322)
T 2ycf_A           87 -----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI---IHRDLKPENVL  146 (322)
T ss_dssp             -----SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             -----CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEE
Confidence                 44899999999999999986 333443332  22377788999999998   99999999984

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.82  E-value=6e-20  Score=140.55  Aligned_cols=136  Identities=17%  Similarity=0.241  Sum_probs=98.5

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCe---EEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~---~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      ......++|.+.+.||+|+||.||+|.+.. .+.   .+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   94 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQ-EDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVS   94 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC--------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEE
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcc-cCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhcee
Confidence            345566789999999999999999999865 443   7999998764   23566789999999999 999999999999


Q ss_pred             Eecc--CCcceEEEEEecCCCCChhhhcCCC-------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKH--QTHSEIWFVMQREAEMPPPRALKPD-------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~--~~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....  +.....+++|||+++|+|.+++...       ..+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i---vH~Dikp~NIl  169 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCM  169 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCc---ccCCCCcceEE
Confidence            7721  0011239999999999999998511       2333332  22377778999999998   99999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.82  E-value=1.3e-19  Score=139.10  Aligned_cols=129  Identities=16%  Similarity=0.129  Sum_probs=105.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEe----cCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALD----TQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .++|++.+.||+|+||.||++.+    .. .+..+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+....  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--   97 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDN-TGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPG--   97 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSS-CSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS--
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCC-cceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC--
Confidence            35799999999999999999984    44 67899999987653 4556789999999999 9999999999886421  


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||+++|+|.+++..  ...+......  .+.+.+|+|+|..|+   +|+||||+||.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dikp~NIl  159 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNIL  159 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCChhhEE
Confidence            5779999999999999999862  3344433322  277788999999988   99999999984

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.82  E-value=1.9e-19  Score=138.27  Aligned_cols=133  Identities=17%  Similarity=0.229  Sum_probs=107.8

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCC-----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGN-----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      .+....++|.+.+.||+|+||.||.+.+.. .+     ..+|+|.+...  ......+.+|+.++..+.+||||+++++.
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETT-CSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecC-CCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            456667889999999999999999999865 43     37999998764  23566789999999998689999999999


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCC---------------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCC
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKP---------------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALD  169 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---------------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~  169 (176)
                      +..    .+.+++||||+++|+|.+++..               ...+....  ...+...+|+|+|..++   +|+|||
T Consensus       119 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlk  191 (333)
T 2i1m_A          119 CTH----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC---IHRDVA  191 (333)
T ss_dssp             ECS----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCS
T ss_pred             Eec----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCc---ccCCcc
Confidence            988    7889999999999999999851               11222222  22367778999999988   999999


Q ss_pred             CCCcc
Q psy9091         170 TQNVT  174 (176)
Q Consensus       170 ~~nv~  174 (176)
                      |+||.
T Consensus       192 p~NIl  196 (333)
T 2i1m_A          192 ARNVL  196 (333)
T ss_dssp             GGGCE
T ss_pred             cceEE
Confidence            99984

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.82  E-value=1.1e-19  Score=139.87  Aligned_cols=127  Identities=17%  Similarity=0.222  Sum_probs=106.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .++|++.+.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.++..+ +|+||+++++.+..    ..
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~   97 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKD-TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKK----KK   97 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETT-TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----TT
T ss_pred             hhhheeeeEEeecCCEEEEEEEECC-CCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeec----CC
Confidence            4579999999999999999999987 7899999988654   23455678999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++++|.+++. ....+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~Nil  156 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNI---IHRDIKPENIL  156 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             EEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCE---EccCcChheEE
Confidence            9999999999999988865 3444443332  2277788999999998   99999999984

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=6.2e-20  Score=144.14  Aligned_cols=128  Identities=16%  Similarity=0.242  Sum_probs=97.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|.+++.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.++..+.+|+||+++++.+...+  ...
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--~~~   85 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRR-TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--DRD   85 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETT-TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT--SSC
T ss_pred             CceEEEEEeeeCCCeEEEEEEECC-CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC--CCE
Confidence            579999999999999999999988 8899999998643   3455678899999999845999999999997621  347


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||++ |+|.+++..........  ...+.+.+|+|+|..|+   +||||||+||.
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vHrDlkp~NIl  141 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL---LHRDMKPSNIL  141 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCCCHHHeE
Confidence            999999998 68998887444443332  22377889999999998   99999999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.82  E-value=1.2e-19  Score=145.84  Aligned_cols=129  Identities=18%  Similarity=0.252  Sum_probs=103.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      .++|.+++.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+....  ..
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETT-TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTT
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCcccc
Confidence            4679999999999999999999988 8899999999753   33566788999999999 9999999999996532  11


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+|+||||+++ +|.+.+... .+....  ...+.+.+|+|+|..|+   +||||||+||.
T Consensus       139 ~~~~~lv~E~~~~-~l~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~i---iHrDlkp~NIl  196 (464)
T 3ttj_A          139 FQDVYLVMELMDA-NLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  196 (464)
T ss_dssp             CCEEEEEEECCSE-EHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CCeEEEEEeCCCC-CHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChHhEE
Confidence            3568999999985 466666432 333322  23377889999999998   99999999984

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.82  E-value=2.7e-19  Score=134.07  Aligned_cols=130  Identities=18%  Similarity=0.229  Sum_probs=105.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ..++|++.+.||+|+||.||++.+.. .+..+++|.+...   ......+.+|+.+++.+ +|+||+++++.+....  .
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~--~   79 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRT--N   79 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGG--G
T ss_pred             chhheeeehhccCCCCcEEEEEEECC-CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCC--C
Confidence            34679999999999999999999987 7889999999764   33566789999999999 9999999999875421  5


Q ss_pred             ceEEEEEecCCCCChhhhcCC-----CCCChhhH--hhhhhHHHHHHHHhcC-----CCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP-----DELDLDNL--QDCGDRYELGYVIGSG-----VCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~--~~~~~~~~l~~lh~~~-----i~~~v~~~~~~~nv~  174 (176)
                      ..++++|||+++|+|.+++..     ...+....  ...+...+|+|+|..+     +   +|+||+|+||.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~i---vH~dl~p~NIl  148 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV---LHRDLKPANVF  148 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC---------CCCCCSGGGEE
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCee---EEeccchhhEE
Confidence            789999999999999999862     12333332  2227777899999999     7   99999999984

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.82  E-value=1.7e-19  Score=137.32  Aligned_cols=132  Identities=21%  Similarity=0.268  Sum_probs=102.2

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEecc----
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH----  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~----  111 (176)
                      ...++|.+.+.||+|+||.||++.+.. .+..+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+....    
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~   85 (320)
T 2i6l_A            8 DLGSRYMDLKPLGCGGNGLVFSAVDND-CDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLT   85 (320)
T ss_dssp             EETTTEEEEEECC-----CEEEEEETT-TTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCC
T ss_pred             ccCCceeEEEEeccCCCeEEEEEEECC-CCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccccc
Confidence            345679999999999999999999987 78999999987653 4567789999999999 9999999998874311    


Q ss_pred             ------CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 ------QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                            .....++++|||++ |+|.+++...........  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  152 (320)
T 2i6l_A           86 DDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANV---LHRDLKPANLF  152 (320)
T ss_dssp             C----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCSGGGEE
T ss_pred             cccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence                  11478999999998 699999975444443332  2377788999999998   99999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.82  E-value=1.3e-19  Score=143.22  Aligned_cols=127  Identities=14%  Similarity=0.180  Sum_probs=100.1

Q ss_pred             CCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +.|.+. +.||+|+||.||++.+.. ++..+|+|.+....    .+.+|+.++..+.+|+||+++++.+.........+|
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~----~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECC-CCCEEEEEEeCcch----hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            457776 789999999999999987 88999999997543    456777777555599999999998864222246799


Q ss_pred             EEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+++|+|.+++...   ..+....  ...++..+|.|+|..|+   +|+||||+||.
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~Nil  193 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPENLL  193 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCcCcceEE
Confidence            999999999999999632   2333332  23377788999999988   99999999984

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.82  E-value=2.9e-19  Score=136.47  Aligned_cols=126  Identities=11%  Similarity=0.086  Sum_probs=100.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|+||.||+|.+.. .+..+|+|.+...   .........|+..+..+.+|+||+++++.+..    ...
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~----~~~  131 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKE-DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE----GGI  131 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----TTE
T ss_pred             hheeeeheeccCCCeEEEEEEECC-CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe----CCE
Confidence            579999999999999999999987 7899999987653   23334455666666555599999999999998    899


Q ss_pred             EEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+ +|+|.+++.  ....+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~NIl  189 (311)
T 3p1a_A          132 LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL---VHLDVKPANIF  189 (311)
T ss_dssp             EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEE
Confidence            99999999 678988876  3334443332  2377788999999987   99999999984

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.82  E-value=2e-19  Score=140.43  Aligned_cols=127  Identities=17%  Similarity=0.263  Sum_probs=105.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ++|.+.+.||+|+||.||+|.+.. ++..||+|.++...         .....+.+|+.++..+.+||||+.+++.+.. 
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-  171 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRA-TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES-  171 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB-
T ss_pred             hhcccceEEecCCCEEEEEEEECC-CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee-
Confidence            579999999999999999999987 78899999987532         1245678899999987679999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ....++||||+++|+|.+++. .........  ...++..+|.|+|..|+   +|+|+||+||.
T Consensus       172 ---~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi---~H~Dlkp~NIl  232 (365)
T 2y7j_A          172 ---SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI---VHRDLKPENIL  232 (365)
T ss_dssp             ---SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ---CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence               789999999999999999986 233333332  23377788999999988   99999999984

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=2.4e-19  Score=138.15  Aligned_cols=129  Identities=19%  Similarity=0.194  Sum_probs=104.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ....+|.+.+.||+|+||.||+|.+.. .+    ..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+.. 
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~-  117 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKT-SSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISK-  117 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS-
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEec-CCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEec-
Confidence            345679999999999999999998764 32    36999998764  33456789999999999 99999999999987 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+..++||||+++|+|.+++..  ...+.....  ..+...+|.|+|..|+   +|+||||+||.
T Consensus       118 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~NIl  179 (333)
T 1mqb_A          118 ---YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAARNIL  179 (333)
T ss_dssp             ---SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             ---CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChheEE
Confidence               7889999999999999999962  334433322  2267778999999998   99999999984

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.82  E-value=1.2e-19  Score=136.62  Aligned_cols=127  Identities=17%  Similarity=0.262  Sum_probs=106.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+.+.||+|+||.||.+.+.. .+..+|+|.+....    .....+.+|+.++..+ +|+||+++++.+..    .
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~   86 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQ-NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHD----R   86 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----S
T ss_pred             hhhceeeheecCCCCeEEEEEEEcC-CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEc----C
Confidence            3579999999999999999999987 78899999987532    1245688999999999 99999999999988    7


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++++|||+++|+|.+++. ....+....  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  146 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV---IHRDIKPENLL  146 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCSGGGEE
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCHHHEE
Confidence            89999999999999999986 333443332  22377778999999988   99999999984

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.82  E-value=2.6e-20  Score=142.59  Aligned_cols=125  Identities=17%  Similarity=0.275  Sum_probs=91.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ++|++++.||+|+||.||+|.+.. ++..+|+|.+....  .....+.+|+.+++.+ +||||+++++.+..    .+.+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~----~~~~   78 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKT-TGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHT----ENKL   78 (317)
T ss_dssp             --------------CEEEEEECSS-SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECC----TTEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECC-CCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEE----CCeE
Confidence            569999999999999999999987 78999999987642  2345688999999999 99999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcCC-------CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP-------DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~-------~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||++ |+|.+++..       ...+.....  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus        79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---vH~Dlkp~NIl  140 (317)
T 2pmi_A           79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI---LHRDLKPQNLL  140 (317)
T ss_dssp             EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCChHHeE
Confidence            99999998 699888751       123333222  2277788999999988   99999999984

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.81  E-value=6.3e-20  Score=139.75  Aligned_cols=135  Identities=19%  Similarity=0.243  Sum_probs=107.1

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEec-----CCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDT-----QNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      ..+....++|.+.+.||+|+||.||++.+.     . .+..+|+|.+...  ......+.+|+.++..+.+||||+++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA-TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTT-CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccc-cceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            345566788999999999999999999852     3 4578999998764  2345678999999999867899999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCCC-----------------CChhhH--hhhhhHHHHHHHHhcCCCccccc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPDE-----------------LDLDNL--QDCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      .+...   ...++++|||+++|+|.+++....                 ......  ...+...+|.|+|..++   +|+
T Consensus        99 ~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~  172 (316)
T 2xir_A           99 ACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHR  172 (316)
T ss_dssp             EECCT---TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             EEecC---CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCc---ccc
Confidence            98763   456999999999999999996322                 222221  12267778999999998   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      ||||+||.
T Consensus       173 dikp~Nil  180 (316)
T 2xir_A          173 DLAARNIL  180 (316)
T ss_dssp             CCSGGGEE
T ss_pred             cCccceEE
Confidence            99999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=1.5e-19  Score=137.80  Aligned_cols=129  Identities=16%  Similarity=0.343  Sum_probs=101.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ..+.+.|.+.+.||+|+||.||.+.+.. ++..+|+|.+.... ....+.+|+.++..+ +|+||+++++.+..    .+
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   97 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKE-TGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFK----NT   97 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETT-TCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEE----TT
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECC-CCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEe----CC
Confidence            4566789999999999999999999987 78899999987643 235688899999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++.  ....+.....  ..+...+|.|+|..|+   +|+||+|+||.
T Consensus        98 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~dl~p~Nil  157 (314)
T 3com_A           98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNIL  157 (314)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC---cCCCcCHHHEE
Confidence            8999999999999999986  3344443322  2367778999999998   99999999984

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.81  E-value=2.3e-19  Score=140.52  Aligned_cols=133  Identities=17%  Similarity=0.227  Sum_probs=105.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc-------CCCCcceeceeEEe
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS-------QHSNIPDFFGAYMK  109 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~-------~h~niv~~~~~~~~  109 (176)
                      ....+|.+.+.||+|+||.||++.+.. .+..+|+|.+.........+.+|+.+++.+.       .|+||+++++.+..
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQ-GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecC-CCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            345789999999999999999999987 8899999999877666778899999999873       17889999999873


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-C--CCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-P--DELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~--~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      .......+++||||+ +|++.+.+. .  ........  ...+.+.+|+|+|.. |+   +|+||||+||.
T Consensus       113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~gi---vHrDikp~NIl  179 (397)
T 1wak_A          113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRI---IHTDIKPENIL  179 (397)
T ss_dssp             EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE---ECCCCSGGGEE
T ss_pred             cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHee
Confidence            221267899999999 566666654 2  23444333  223778889999998 88   99999999984

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=4.2e-19  Score=138.31  Aligned_cols=134  Identities=21%  Similarity=0.234  Sum_probs=108.6

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-  111 (176)
                      ..+...+|++++.||+|+||.||++.+.. ++..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+..+. 
T Consensus        22 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTI   99 (364)
T ss_dssp             BCCCTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSST
T ss_pred             eccccccEEEEEEeecCCCeEEEEEEECC-CCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCc
Confidence            34556789999999999999999999987 8889999998754  33456789999999999 9999999999987632 


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....++++|||++ |+|.+++...........  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus       100 ~~~~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~NIl  160 (364)
T 3qyz_A          100 EQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LHRDLKPSNLL  160 (364)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             cccceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCChHhEE
Confidence            11246899999998 589998874444443332  2377888999999998   99999999984

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.81  E-value=1e-19  Score=140.28  Aligned_cols=130  Identities=15%  Similarity=0.162  Sum_probs=98.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhcc--------CCCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLS--------QHSNIP  101 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~--------~h~niv  101 (176)
                      .++|.+.+.||+|+||.||+|.+   ++..+|+|.+....         .....+.+|+.+++.+.        .|+|++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             cccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            35699999999999999999998   46899999997542         13467889999998873        377777


Q ss_pred             eeceeEEecc--------------------------CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHH
Q psy9091         102 DFFGAYMKKH--------------------------QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELG  153 (176)
Q Consensus       102 ~~~~~~~~~~--------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~  153 (176)
                      ++.+.+....                          .....+|+||||+++|++.+.+.....+.....  ..+++.+|+
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            7766653210                          014779999999999987777754444443332  337788999


Q ss_pred             HHH-hcCCCccccccCCCCCcc
Q psy9091         154 YVI-GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       154 ~lh-~~~i~~~v~~~~~~~nv~  174 (176)
                      |+| ..++   |||||||+||.
T Consensus       176 ~lH~~~~i---vHrDlKp~NIL  194 (336)
T 2vuw_A          176 VAEASLRF---EHRDLHWGNVL  194 (336)
T ss_dssp             HHHHHHCC---BCSCCCGGGEE
T ss_pred             HHHHhCCE---eECCCCHHHEE
Confidence            999 9999   99999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.81  E-value=3e-19  Score=134.66  Aligned_cols=127  Identities=17%  Similarity=0.228  Sum_probs=107.0

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .++|++.+.||+|+||.||++.+.. .+..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+..    ..
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~   94 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILED----SS   94 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----SS
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcC-CCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeC----CC
Confidence            3579999999999999999999987 78899999987532   3456789999999999 99999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+++++|.+++. ....+....  ...+...+|.++|..|+   +|+||+|+||.
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---~H~dl~p~NIl  153 (287)
T 2wei_A           95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI---VHRDLKPENIL  153 (287)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             eEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCChhhEE
Confidence            8999999999999998886 333343332  22377788999999998   99999999984

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.81  E-value=2e-19  Score=138.24  Aligned_cols=126  Identities=18%  Similarity=0.222  Sum_probs=98.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .++|++.+.||+|+||.||+|.+.. .+.    .+++|.+...  ......+.+|+.++..+ +|+||+++++.+..   
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~---   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLT---   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEES---
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcC-CCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEec---
Confidence            3569999999999999999999865 544    4688877543  23456789999999999 99999999999977   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +..++++||+++|+|.+++.  ..........  ..+.+.+|.|+|..++   +|+||||+||.
T Consensus        89 --~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~Dikp~NIl  149 (327)
T 3poz_A           89 --STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVL  149 (327)
T ss_dssp             --SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             --CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe---eCCCCChheEE
Confidence              44789999999999999986  2334433322  2377788999999998   99999999984

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.81  E-value=4.2e-20  Score=139.85  Aligned_cols=131  Identities=24%  Similarity=0.335  Sum_probs=91.1

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +....+.|.+.+.||+|+||.||.+.+.. .+..+|+|.+....  .....+.+|+.++..+ +||||+++++.+..   
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~---   84 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAP-KKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVV---   84 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEES---
T ss_pred             cccchhhhhhhheeccccceEEEEEEECC-CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEee---
Confidence            45556789999999999999999999877 78899999887542  3455678899999998 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..++||||+++|+|.+++..         ...+....  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus        85 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dl~p~Nil  153 (303)
T 2vwi_A           85 -KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNIL  153 (303)
T ss_dssp             -SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             -cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCC---CCCCCChhhEE
Confidence             7889999999999999999851         22333322  22267778999999998   99999999984

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=8.7e-20  Score=142.58  Aligned_cols=133  Identities=20%  Similarity=0.300  Sum_probs=101.1

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-  111 (176)
                      ....++|.+.+.||+|+||.||.+.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.... 
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~   98 (367)
T 1cm8_A           21 WEVRAVYRDLQPVGSGAYGAVCSAVDGR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDET   98 (367)
T ss_dssp             ECCBSSEEEEEEC------CEEEEEETT-TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSS
T ss_pred             eeecceEEEeEEeeecCCeEEEEEEECC-CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCc
Confidence            3456789999999999999999999987 8899999998653   23456789999999999 9999999999997631 


Q ss_pred             -CCcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -QTHSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .....+|+||||+ +++|.+++..........  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  160 (367)
T 1cm8_A           99 LDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI---IHRDLKPGNLA  160 (367)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             cccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCcCHHHEE
Confidence             1124579999999 789999987444444332  22377888999999998   99999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=4.8e-20  Score=143.35  Aligned_cols=127  Identities=16%  Similarity=0.236  Sum_probs=103.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEec---CCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDT---QNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ++|.+.+.||+|+||.||++.+.   . .+..+|+|.+....     .....+.+|+.++..+.+|+||+.+++.+..  
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--  130 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHD-TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--  130 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTT-TTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCC-CCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence            57999999999999999999884   3 57899999986421     2334567788889888679999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+++||||+++|+|.+++. ..........  ..+++.+|.|+|..++   +|+||||+||.
T Consensus       131 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  191 (355)
T 1vzo_A          131 --ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI---IYRDIKLENIL  191 (355)
T ss_dssp             --TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             --CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence              789999999999999999986 3334433322  2267788999999998   99999999984

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.81  E-value=7.3e-20  Score=140.49  Aligned_cols=130  Identities=16%  Similarity=0.137  Sum_probs=102.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEe-----cCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALD-----TQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      .....+|.+.+.||+|+||.||++.+     .. .+..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  103 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP-SPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSL  103 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC---------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCC-ccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEc
Confidence            34557899999999999999999984     33 4668999998653  34556788999999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcCCC--------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALKPD--------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    ....++||||+++|+|.+++...        .......  ...+.+.+|.|+|..|+   +|+||+|+||.
T Consensus       104 ~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i---~H~dlkp~NIl  172 (327)
T 2yfx_A          104 Q----SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCL  172 (327)
T ss_dssp             S----SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             C----CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe---ecCcCCHhHEE
Confidence            8    67889999999999999999621        1232222  22367778999999998   99999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.81  E-value=1.9e-19  Score=135.54  Aligned_cols=126  Identities=17%  Similarity=0.170  Sum_probs=102.3

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--------hHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--------FIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--------~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      ..++|.+.+.||+|+||.||++.+.. .+..+|+|.+.....        ....+.+|+.++..+ +|+||+++++.+..
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVK-DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHN   94 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETT-TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETT
T ss_pred             hhccceehhccccCCceeEEEEEEcC-CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecC
Confidence            34679999999999999999999987 788999999865321        116789999999999 99999999999865


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                          ..  +++|||+++|+|.+++..  ...+....  ...+...+|+|+|..+  +   +|+||||+||.
T Consensus        95 ----~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i---vH~dikp~Nil  156 (287)
T 4f0f_A           95 ----PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI---VHRDLRSPNIF  156 (287)
T ss_dssp             ----TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC---BCSCCSGGGEE
T ss_pred             ----CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe---ecCCCCcceEE
Confidence                33  799999999999988852  23333332  2237777899999998  8   99999999984

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.81  E-value=2e-19  Score=138.04  Aligned_cols=127  Identities=19%  Similarity=0.244  Sum_probs=103.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeE--EEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKK--VSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~--~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+.+.||+|+||.||++.+.. .+..  +++|.+...  ......+.+|+.++..+.+||||+++++.+..    .+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----~~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RG   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE-TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----TT
T ss_pred             HHccceeeeecCCCceEEEEEEcc-CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee----CC
Confidence            579999999999999999999876 6664  489988753  23455688999999998789999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++|+|.+++...                 .......  ...+...+|+|+|..|+   +|+||||+||.
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIl  174 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNIL  174 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCccceEE
Confidence            999999999999999998632                 2333332  22267778999999998   99999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.81  E-value=3.4e-19  Score=137.77  Aligned_cols=127  Identities=20%  Similarity=0.238  Sum_probs=104.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCC--CCcceeceeEEecc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKH  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~  111 (176)
                      .....|.+.+.||+|+||.||++.+.  .+..+|+|.+...   ......+.+|+.++..+ .|  +||+++++.+..  
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~~~iv~~~~~~~~--   80 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEIT--   80 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHH-TTTCTTBCCEEEEEEC--
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccchHHHHHHHHHHHHHHhh-hhcCCceEEEeeeEee--
Confidence            34567999999999999999999884  4788999998754   23456789999999998 55  999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+.+++||| +.+|+|.+++. ....+....  ...+.+.+|.|+|..++   +|+||||+||.
T Consensus        81 --~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---iHrDikp~NIl  140 (343)
T 3dbq_A           81 --DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI---VHSDLKPANFL  140 (343)
T ss_dssp             --SSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             --CCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCcceEE
Confidence              789999999 56789999997 333443332  23377889999999998   99999999984

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.81  E-value=5.4e-20  Score=141.27  Aligned_cols=125  Identities=20%  Similarity=0.236  Sum_probs=101.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ++|.+++.||+|+||.||++.+.. ++..+|+|.+.....  ....+.+|+.+++.+ +|+||+++++.+..    .+.+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~   75 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL-TDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHT----EKSL   75 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEEC----SSCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC-CCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEee----CCEE
Confidence            469999999999999999999987 788999999876432  112355799999999 99999999999988    7889


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||++ |+|.+++.  ....+.....  ..+.+.+|.|+|..|+   +|+||||+||.
T Consensus        76 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dikp~NIl  132 (324)
T 3mtl_A           76 TLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV---LHRDLKPQNLL  132 (324)
T ss_dssp             EEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---EESSCCGGGEE
T ss_pred             EEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCCcCHHHEE
Confidence            99999998 68888886  2334443322  2377788999999998   99999999984

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.81  E-value=2.8e-19  Score=136.86  Aligned_cols=128  Identities=19%  Similarity=0.167  Sum_probs=103.9

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCC---CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQN---GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~---~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .|++++.||+|+||.||.+.+...   .+..+|+|.+...  ......+.+|+.+++.+ +|+||+++++.+....  ..
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~--~~  108 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAG--AA  108 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT--TT
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCC--Cc
Confidence            349999999999999998865320   4678999999864  34566789999999999 9999999999998731  46


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++............  .+...+|+++|..|+   +|+||||+||.
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~i---vH~Dikp~Nil  166 (318)
T 3lxp_A          109 SLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVL  166 (318)
T ss_dssp             EEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCchheEE
Confidence            799999999999999999754444433322  267778999999998   99999999984

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.81  E-value=4.4e-19  Score=133.25  Aligned_cols=131  Identities=18%  Similarity=0.273  Sum_probs=104.7

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      +....++|.+.+.||+|+||.||+|.+...  .+..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+.. 
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-   84 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-   84 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-
Confidence            344556899999999999999999987531  2346999998764  34567789999999999 99999999999865 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          +..+++|||+++|+|.+++.  ....+.....  ..+...+|+|+|..|+   +|+|+||+||.
T Consensus        85 ----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil  145 (281)
T 3cc6_A           85 ----EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC---VHRDIAVRNIL  145 (281)
T ss_dssp             ----SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSGGGEE
T ss_pred             ----CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCccceEE
Confidence                45689999999999999996  2334443322  2267778999999998   99999999984

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.81  E-value=5.6e-20  Score=141.99  Aligned_cols=128  Identities=19%  Similarity=0.240  Sum_probs=106.1

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh---------hHHHHHHHHHHHHhccCCCCcceeceeEE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---------FIDDIKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~---------~~~~~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      ..++|.+.+.||+|+||.||++.+.. .+..+|+|.+.....         ....+.+|+.++..+ +|+||+++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~   99 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKE-KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFE   99 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETT-TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             cccceEEEeEEEecCCEEEEEEEECC-CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence            44679999999999999999999988 889999999876421         233567899999999 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCC-ChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEM-PPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g-~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+.+++||||+.+| +|.+++.. ...+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus       100 ~----~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  162 (335)
T 3dls_A          100 N----QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI---IHRDIKDENIV  162 (335)
T ss_dssp             C----SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             e----CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---EEeccCHHHEE
Confidence            8    78999999999777 99999873 344443332  2377788999999998   99999999984

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.81  E-value=7.5e-19  Score=145.66  Aligned_cols=128  Identities=19%  Similarity=0.242  Sum_probs=102.2

Q ss_pred             CCCCeEEee-EEeecCCeeEEEEEecCC-CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGY-VIGSGVCADVYEALDTQN-GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~-~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ..+.+.+.+ .||+|+||.||+|.+... .+..||+|.+...  ......+.+|+.+++.+ +|+||+++++.+..    
T Consensus       333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~----  407 (613)
T 2ozo_A          333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA----  407 (613)
T ss_dssp             CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES----
T ss_pred             cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc----
Confidence            344566666 899999999999987531 3457999999764  23567899999999999 99999999999865    


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +.+++||||+++|+|.+++..  .........  ..++..+|+|+|..++   +|+||||+||.
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---iHrDlkp~NIL  468 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVL  468 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE---EcCcCCHHHEE
Confidence             569999999999999999962  233433322  2277788999999998   99999999984

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.81  E-value=4.4e-19  Score=133.92  Aligned_cols=129  Identities=21%  Similarity=0.315  Sum_probs=102.5

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +......++|++.+.||+|+||.||++.+..    .+|+|.+...   ......+.+|+.+++.+ +|+||+.+++.. .
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~   90 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-T   90 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSS----EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-C
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcC----ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-c
Confidence            3356667789999999999999999998743    4899998753   34566789999999999 999999999865 4


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          ....+++|||+++++|.+++.  ....+....  ...+...+|+|+|..++   +|+||||+||.
T Consensus        91 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i---~H~Dlkp~Nil  152 (289)
T 3og7_A           91 ----APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI---IHRDLKSNNIF  152 (289)
T ss_dssp             ----SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             ----CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccccCccceEE
Confidence                466899999999999999996  233443332  22377778999999998   99999999984

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.81  E-value=5.6e-19  Score=133.59  Aligned_cols=125  Identities=17%  Similarity=0.245  Sum_probs=101.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++.+.||+|+||.||.+.+.. .+..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+..    .+.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~   76 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHT----ENK   76 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEE----TTE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcC-CCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEec----CCc
Confidence            469999999999999999999987 78899999987542   2235688999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-C--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-P--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||++ |+|.+++. .  ........  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus        77 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil  135 (299)
T 2r3i_A           77 LYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLL  135 (299)
T ss_dssp             EEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             eEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCCCCHHHeE
Confidence            999999998 69999886 2  23333332  22377778999999998   99999999984

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.81  E-value=4.7e-19  Score=134.04  Aligned_cols=130  Identities=15%  Similarity=0.165  Sum_probs=101.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ....|.+.+.||+|+||.||+|.+..+  ....+++|.+...  ......+.+|+.+++.+ +|+||+++++.+...   
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~---   98 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS---   98 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCS---
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcC---
Confidence            345699999999999999999987541  1236889988753  33556789999999999 999999999986542   


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..+++|||+++|+|.+++..  .........  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i---~H~dikp~Nil  160 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF---VHRDLAARNCM  160 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCchheEE
Confidence            5678999999999999999963  223333222  2267788999999998   99999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.80  E-value=4.9e-19  Score=135.70  Aligned_cols=129  Identities=18%  Similarity=0.318  Sum_probs=105.1

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEe-cCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCC------CcceeceeEE
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALD-TQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS------NIPDFFGAYM  108 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~------niv~~~~~~~  108 (176)
                      ....++|++.+.||+|+||.||++.+ .. .+..+|+|.+.........+.+|+.++..+ .|+      +++.+++.+.
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A           10 DVLSARYEIVDTLGEGAFGKVVECIDHKA-GGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEE
T ss_pred             CCccCceEEEEEEecCCCeEEEEEEecCC-CCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccc
Confidence            34456899999999999999999998 44 678999999987766667788899988887 554      5899999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC-CC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK-PD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~-~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .    .+.+++||||+ +++|.+++. ..  .......  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        88 ~----~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlkp~Nil  150 (339)
T 1z57_A           88 H----HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL---THTDLKPENIL  150 (339)
T ss_dssp             E----TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             c----CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC---cCCCCCHHHEE
Confidence            8    78999999999 899999987 22  2333322  22377788999999998   99999999984

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.80  E-value=1.2e-19  Score=139.33  Aligned_cols=126  Identities=20%  Similarity=0.188  Sum_probs=99.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeE----EEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKK----VSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~----~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      .++|++.+.||+|+||.||+|.+.. .+..    +++|.+....  .....+..|+.++..+ +|+||+++++.+..   
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~---   86 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCPG---   86 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECC-TTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEECB---
T ss_pred             HhHceeeeeeeecCCceEEEEEEcC-CCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC---
Confidence            4579999999999999999999876 5543    7788775432  2234567889999998 99999999998854   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...++||||+++|+|.+++..  ........  ...+...+|+|+|..|+   +|+||||+||.
T Consensus        87 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dikp~Nil  147 (325)
T 3kex_A           87 --SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM---VHRNLAARNVL  147 (325)
T ss_dssp             --SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC---CCSCCSSTTEE
T ss_pred             --CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC---CCCccchheEE
Confidence              668999999999999999863  23333222  22377888999999998   99999999984

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.80  E-value=3.4e-19  Score=136.77  Aligned_cols=132  Identities=18%  Similarity=0.192  Sum_probs=104.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEe----cCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALD----TQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ......|++.+.||+|+||.||++.+    .. .+..+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+...
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSA  114 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSS-CCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC-
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCC-CceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEec
Confidence            33456799999999999999999984    34 57899999987643 4566789999999999 999999999988652


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .  ...+++||||+++|+|.+++..  ...+.....  ..+...+|+++|..++   +|+||||+||.
T Consensus       115 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dikp~NIl  177 (326)
T 2w1i_A          115 G--RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNIL  177 (326)
T ss_dssp             -----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             C--CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE---eccCCCcceEE
Confidence            1  3468999999999999999972  234433322  2277778999999988   99999999984

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.80  E-value=4.8e-19  Score=133.80  Aligned_cols=127  Identities=17%  Similarity=0.259  Sum_probs=105.2

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..++|.+.+.||+|+||.||+|.+.. .+..+|+|.+.... ....+.+|+.++..+.+|+|++++++.+..    ....
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----~~~~   81 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLL-NNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE----GLHN   81 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETT-TTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE----TTEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECC-CCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCC----Ccee
Confidence            35679999999999999999999877 88999999987543 223477889999988789999999999988    7899


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++|||+ +|+|.+++.  ....+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus        82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dlkp~NIl  138 (298)
T 1csn_A           82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL---VYRDIKPDNFL  138 (298)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEE
Confidence            9999999 899999997  2234443322  2277788999999988   99999999985

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=8.5e-19  Score=132.15  Aligned_cols=130  Identities=18%  Similarity=0.222  Sum_probs=103.4

Q ss_pred             CCCCCCeEEee-EEeecCCeeEEEEEecC-CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGY-VIGSGVCADVYEALDTQ-NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~-~lg~G~~g~v~~~~~~~-~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....++|.+.. .||+|+||.||+|.+.. +.+..+|+|.+...  ......+.+|+.++..+ +||||+++++.+.   
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~---   80 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQ---   80 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE---
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEec---
Confidence            33445688776 99999999999998642 14578999999864  34567789999999999 9999999999984   


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        .+..++||||+++|+|.+++..  ...+.....  ..+...+|.++|..++   +|+||+|+||.
T Consensus        81 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  142 (287)
T 1u59_A           81 --AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRDLAARNVL  142 (287)
T ss_dssp             --SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             --CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCE---eeCCCchheEE
Confidence              4669999999999999999862  334433322  2267778999999998   99999999984

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.80  E-value=7.3e-19  Score=133.39  Aligned_cols=128  Identities=14%  Similarity=0.173  Sum_probs=100.7

Q ss_pred             CCCeEEe-eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          39 GDRYELG-YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+.|.+. +.||+|+||.||.+.+.. ++..+|+|.+....    .+.+|+.++..+.+|+||+++++.+.........+
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcC-CCcEEEEEEecccH----HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3457777 789999999999999987 88999999997643    45678887755449999999999986522224679


Q ss_pred             EEEEecCCCCChhhhcC-CC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|.+++. ..  ........  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dlkp~Nil  149 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPENLL  149 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEE
Confidence            99999999999999997 22  23433322  2267778999999998   99999999984

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.80  E-value=5.6e-19  Score=133.40  Aligned_cols=128  Identities=20%  Similarity=0.205  Sum_probs=102.3

Q ss_pred             CCCCCeEEee-EEeecCCeeEEEEEec--CCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGY-VIGSGVCADVYEALDT--QNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~-~lg~G~~g~v~~~~~~--~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ....+|.+.+ .||+|+||.||++.+.  . .+..+|+|.+....   .....+.+|+.+++.+ +|+||+++++.+ . 
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~-   88 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-E-   88 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-E-
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCC-ceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-C-
Confidence            3446799998 9999999999999653  3 45789999987642   2356789999999999 999999999998 4 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+..+++|||+++|+|.+++. ....+....  ...+...+|+|+|..++   +|+||+|+||.
T Consensus        89 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---~H~dikp~Nil  149 (291)
T 1xbb_A           89 ---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF---VHRDLAARNVL  149 (291)
T ss_dssp             ---SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ---CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCe---EcCCCCcceEE
Confidence               477899999999999999997 333443332  22277788999999998   99999999984

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.7e-19  Score=137.35  Aligned_cols=130  Identities=18%  Similarity=0.227  Sum_probs=98.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhc-cCCCCcceeceeEEeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDL-SQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l-~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ...++|++.+.||+|+||.||++.+   .+..+|+|.+.....  .....|..++... .+|+||+++++.+........
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccccceEEEeEeecCCCeEEEEEEE---CCceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            3446899999999999999999987   468999999875433  2334444444432 289999999999987321127


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhc--------CCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGS--------GVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~--------~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.++++.........  ...+...+|.|+|..        ++   +|+||||+||.
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i---vH~Dikp~Nil  174 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI---AHRDLKSKNIL  174 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCE---ECSCCCGGGEE
T ss_pred             ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCE---EecccchHHEE
Confidence            8999999999999999997444444332  223777889999988        66   99999999984

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.80  E-value=7.6e-19  Score=137.31  Aligned_cols=129  Identities=19%  Similarity=0.244  Sum_probs=103.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~  113 (176)
                      .++|.+.+.||+|+||.||+|.+.. .+..+|+|.+...   ......+.+|+.+++.+ +||||+++++.+....  ..
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAI-LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTT
T ss_pred             hhheeEeeeeEecCCEEEEEEEECC-CCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeecccccccc
Confidence            4679999999999999999999987 8899999998753   23456788999999999 9999999999987621  11


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++||||++ |+|.+++.. ..+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus       102 ~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dlkp~NIl  159 (371)
T 2xrw_A          102 FQDVYIVMELMD-ANLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  159 (371)
T ss_dssp             CCEEEEEEECCS-EEHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             ccceEEEEEcCC-CCHHHHHhh-ccCHHHHHHHHHHHHHHHHHHHHCCe---ecccCCHHHEE
Confidence            237899999998 578888753 2333222  23377888999999998   99999999984

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.80  E-value=7.4e-19  Score=135.93  Aligned_cols=133  Identities=20%  Similarity=0.274  Sum_probs=106.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-C
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-Q  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~  112 (176)
                      ....++|.+.+.||+|+||.||++.+.. ++..+|+|.+...  ......+.+|+.++..+ +|+||+++++.+.... .
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKP-TGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECC-CCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence            3456789999999999999999999987 7899999998753  33456788999999999 9999999999876521 1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....+++|||++ |+|.+++.....+.....  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        85 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---vH~Dlkp~Nil  144 (353)
T 2b9h_A           85 NFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV---IHRDLKPSNLL  144 (353)
T ss_dssp             TCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             ccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence            1367999999997 689988864444443322  2377788999999988   99999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.80  E-value=3.9e-19  Score=138.94  Aligned_cols=132  Identities=19%  Similarity=0.295  Sum_probs=98.6

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--  111 (176)
                      ...++|.+++.||+|+||.||++.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+....  
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~  103 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL  103 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETT-TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECC-CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCcc
Confidence            344679999999999999999999987 8899999998653   23456788999999999 9999999999986521  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....++++||++ +++|.+++...........  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus       104 ~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vH~Dlkp~NIl  164 (367)
T 2fst_X          104 EEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA  164 (367)
T ss_dssp             GGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             ccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHhhEE
Confidence            1125689999999 6899998875444443332  2377888999999998   99999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.80  E-value=5.8e-19  Score=135.69  Aligned_cols=127  Identities=20%  Similarity=0.224  Sum_probs=95.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHH--HHhccCCCCcceeceeEEecc-CCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRM--LRDLSQHSNIPDFFGAYMKKH-QTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~--~~~l~~h~niv~~~~~~~~~~-~~~~  115 (176)
                      .++|++.+.||+|+||.||++.+   .+..+|+|.+.....  ..+..|..+  +..+ .|+||+++++.+.... ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~--~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANR--QNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGGH--HHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCE
T ss_pred             hHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccch--hhHHHHHHHHHHHhc-cCcchhhheecccccccCCCc
Confidence            45799999999999999999976   568999999876543  233344444  4446 9999999997654322 2245


Q ss_pred             eEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhc---------CCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGS---------GVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~---------~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++..........  ...++..+|+|+|..         ++   +|+||||+||.
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~i---vH~Dikp~Nil  152 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI---SHRDLNSRNVL  152 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCE---ECSSCSGGGEE
T ss_pred             eEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccce---eecccccceEE
Confidence            6899999999999999997333333222  233777889999998         77   99999999984

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.80  E-value=1.5e-18  Score=144.41  Aligned_cols=125  Identities=20%  Similarity=0.220  Sum_probs=99.7

Q ss_pred             CeEEe-eEEeecCCeeEEEEEecCC-CCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          41 RYELG-YVIGSGVCADVYEALDTQN-GNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        41 ~~~~~-~~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      .+.+. +.||+|+||.||+|.+... .+..+|+|.+....   .....+.+|+.++..+ +|+||+++++.+..     +
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-----~  442 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-----E  442 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-----S
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-----C
Confidence            34443 4899999999999966420 45789999987642   3467899999999999 99999999998865     5


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.+++. .........  ...++..+|+|||..++   |||||||+||.
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~i---iHrDLkp~NIL  501 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF---VHRDLAARNVL  501 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eCCCCChHhEE
Confidence            5899999999999999997 333444332  22377888999999998   99999999984

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.80  E-value=1.1e-18  Score=131.38  Aligned_cols=129  Identities=15%  Similarity=0.179  Sum_probs=98.9

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHH-HHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDI-KEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~-~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ....++|++.+.||+|+||.||++.+.. ++..+|+|.+...  ....... ..+...++.+ +||||+++++.+..   
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~---   77 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVP-SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFR---   77 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEC---
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecC-CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeec---
Confidence            4455789999999999999999999987 8899999998764  2222333 3344446666 99999999999988   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                       .+..++||||++ |+|.+++.     ....+....  ...+.+.+|+|+|.. |+   +|+||||+||.
T Consensus        78 -~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i---~H~dlkp~Nil  142 (290)
T 3fme_A           78 -EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV---IHRDVKPSNVL  142 (290)
T ss_dssp             -SSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC---CCCCCSGGGCE
T ss_pred             -cCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe---ecCCCCHHHEE
Confidence             788999999998 58877764     223443332  223777889999997 88   99999999984

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.80  E-value=7.5e-19  Score=133.71  Aligned_cols=131  Identities=19%  Similarity=0.255  Sum_probs=99.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh------hhHHHHHHHHHHHHhcc--CCCCcceeceeEEec
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP------EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKK  110 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~------~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~  110 (176)
                      .++|++.+.||+|+||.||++.+.. ++..+|+|.+....      .....+.+|+.+++.+.  .|+||+++++.+...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPH-SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTT-TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4679999999999999999999987 88999999987421      12345667777777652  599999999999873


Q ss_pred             c-CCcceEEEEEecCCCCChhhhcCCCC---CChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 H-QTHSEIWFVMQREAEMPPPRALKPDE---LDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~-~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      . .....++++|||++ |+|.+++....   .+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~Dlkp~Nil  152 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENIL  152 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCTTTEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence            2 11226899999997 69999987321   3433322  2377788999999998   99999999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=3.6e-19  Score=137.82  Aligned_cols=128  Identities=24%  Similarity=0.285  Sum_probs=98.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh------hHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE------FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~------~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      ....+|.+.+.||+|+||.||.+.+.. ++..+|+|.+.....      ....+.+|+.++..+ +|+||+++++.+.. 
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~-   83 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKN-TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGH-   83 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSS-CCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECC-
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECC-CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEee-
Confidence            345679999999999999999999987 788999999875321      123578899999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ...+++||||+++ +|.+++...  .......  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        84 ---~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlkp~Nil  144 (346)
T 1ua2_A           84 ---KSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI---LHRDLKPNNLL  144 (346)
T ss_dssp             ---TTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             ---CCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCE---ECCCCCHHHEE
Confidence               7889999999985 888888632  2332222  23377788999999998   99999999984

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.80  E-value=6.8e-19  Score=134.92  Aligned_cols=137  Identities=20%  Similarity=0.174  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      +.+.....+|++.+.||+|+||.||++.+.. .+..+|+|.+... ......+.+|+.++..+.+|+||+++++.+....
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVG-SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK   99 (337)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred             ceeeccCceEEEEEEEccCCceEEEEEEECC-CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence            3444555689999999999999999999987 7889999988654 3456678999999999845999999999985311


Q ss_pred             ----CCcceEEEEEecCCCCChhhhcC----CCCCChhhHh--hhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         112 ----QTHSEIWFVMQREAEMPPPRALK----PDELDLDNLQ--DCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       112 ----~~~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~--~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                          .....++++|||++ |+|.+++.    ..........  ..++..+|+|+|..+  +   +|+||||+||.
T Consensus       100 ~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~i---vH~Dikp~NIl  170 (337)
T 3ll6_A          100 EESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPI---IHRDLKVENLL  170 (337)
T ss_dssp             TTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCC---BCCCCCGGGCE
T ss_pred             cccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCE---EEccCCcccEE
Confidence                12566999999996 78988875    2334433322  227778899999998  8   99999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.79  E-value=3.7e-19  Score=134.24  Aligned_cols=124  Identities=19%  Similarity=0.261  Sum_probs=101.1

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      |.....||+|+||.||+|.+.. ++..+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+..    .+.++++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv   97 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLS-NQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSE----NGFIKIF   97 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETT-TCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEE----TTEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECC-CCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEe----CCcEEEE
Confidence            4444589999999999999987 78899999987653 3456789999999999 99999999999988    7899999


Q ss_pred             EecCCCCChhhhcCCC----CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         121 MQREAEMPPPRALKPD----ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~~----~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |||+++|+|.+++...    .......  ...+...+|.|+|..|+   +|+||+|+||.
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~Nil  154 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI---VHRDIKGDNVL  154 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE---EccCCChhhEE
Confidence            9999999999998621    2223222  22377788999999988   99999999984

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.1e-18  Score=131.94  Aligned_cols=127  Identities=15%  Similarity=0.142  Sum_probs=100.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      -.|...+.||+|+||.||+|.+.. .+   ..+|+|.+...  ......+.+|+.+++.+ +|+||+++++.+...   .
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~---~   95 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYID-QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPP---E   95 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEC-SSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCS---S
T ss_pred             eEEccCceeccCCCceEEEEEEec-CCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecC---C
Confidence            357788999999999999998754 33   37999998754  23566789999999999 999999999999762   3


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|||+.+|+|.+++..  ........  ...+...+|+|+|..|+   +|+|+||+||.
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---~H~dikp~Nil  156 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF---VHRDLAARNCM  156 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCcceEE
Confidence            345899999999999999973  22333222  22267788999999998   99999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.79  E-value=6.8e-19  Score=135.38  Aligned_cols=126  Identities=18%  Similarity=0.222  Sum_probs=101.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ..+|++.+.||+|+||.||+|.+.. .+.    .+++|.+...  ......+.+|+.++..+ +||||+++++.+..   
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~---   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLT---   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC-TTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEES---
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcC-CCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEec---
Confidence            4569999999999999999999876 554    3577777543  23567789999999999 99999999999977   


Q ss_pred             CcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +..+++++|+++|+|.+++.  ..........  ..+.+.+|.|+|..++   +|+||||+||.
T Consensus        89 --~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~NIl  149 (327)
T 3lzb_A           89 --STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVL  149 (327)
T ss_dssp             --SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             --CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCC---cCCCCCHHHEE
Confidence              44889999999999999986  2334443322  2377788999999998   99999999984

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.79  E-value=5.3e-20  Score=141.05  Aligned_cols=135  Identities=20%  Similarity=0.233  Sum_probs=107.6

Q ss_pred             ccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--hHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          30 LDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--FIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      +.+..+....++|.+.+.||+|+||.||++...  .+..+|+|.+.....  ....+.+|+.++..+ .|+||+++++.+
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~   96 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC   96 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEE
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEE
Confidence            445556677788999999999999999999854  477899999876431  223588999999998 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCCCC-----CChhhH--hhhhhHHHHHHHHhc---CCCccccccCCCCCcc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKPDE-----LDLDNL--QDCGDRYELGYVIGS---GVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~--~~~~~~~~l~~lh~~---~i~~~v~~~~~~~nv~  174 (176)
                      ..    ....++||||+++|+|.+++....     ......  ...+...+|+|+|..   |+   +|+||||+||.
T Consensus        97 ~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i---vH~Dlkp~Nil  166 (326)
T 3uim_A           97 MT----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI---IHRDVKAANIL  166 (326)
T ss_dssp             CC----SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCE---ECCCCSGGGEE
T ss_pred             ec----CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe---EeCCCchhhEE
Confidence            88    788999999999999999986321     333222  223667789999999   76   99999999984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.79  E-value=5.1e-19  Score=148.19  Aligned_cols=132  Identities=20%  Similarity=0.227  Sum_probs=101.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC-c
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT-H  114 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~-~  114 (176)
                      ..++|.+.+.||+|+||.||++.+...++..+++|.+...  ......+..|+.++..+ +||||+++++.+...... .
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSC
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCC
Confidence            3468999999999999999999986314688999988653  34456788999999999 999999999999873211 1


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...|+||||++|++|.+++.. ..+.....  ..++..+|.|+|..|+   ||+||||+||.
T Consensus       157 ~~~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~gi---iHrDlkp~NIl  214 (681)
T 2pzi_A          157 PVGYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIGL---VYNDLKPENIM  214 (681)
T ss_dssp             EEEEEEEECCCCEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ceeEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCC---eecccChHHeE
Confidence            127999999999999988754 34433322  2377778999999998   99999999984

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.79  E-value=3.8e-19  Score=139.46  Aligned_cols=129  Identities=18%  Similarity=0.320  Sum_probs=98.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-----
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-----  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-----  111 (176)
                      ....+|.+.+.||+|+||.||+|.+.. ++..+|+|.+......   ..+|+.+++.+ +|+||+++++.+....     
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~~~~~~~~---~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIE-SGKRFALKKVLQDPRY---KNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETT-TCCEEEEEEEECCTTS---CCHHHHHHTTC-CCTTBCCEEEEEEEC------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECC-CCCEEEEEEEecCcch---HHHHHHHHHHc-CCCCccchhheeeecCccccc
Confidence            345679999999999999999999988 8899999998765321   24689999999 9999999999985521     


Q ss_pred             -----------------------------CCcceEEEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHH
Q psy9091         112 -----------------------------QTHSEIWFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYV  155 (176)
Q Consensus       112 -----------------------------~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~l  155 (176)
                                                   .....+++||||++ |+|.+.+.     .........  ...+.+.+|+|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                         01345899999998 57776664     233333332  233778889999


Q ss_pred             HhcCCCccccccCCCCCcc
Q psy9091         156 IGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       156 h~~~i~~~v~~~~~~~nv~  174 (176)
                      |..|+   +|+||||+||.
T Consensus       158 H~~gi---~H~Dikp~Nil  173 (383)
T 3eb0_A          158 HSLGI---CHRDIKPQNLL  173 (383)
T ss_dssp             HTTTE---ECSCCCGGGEE
T ss_pred             HHCcC---ccCccCHHHEE
Confidence            99988   99999999984

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=7.7e-20  Score=143.15  Aligned_cols=135  Identities=16%  Similarity=0.096  Sum_probs=99.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhcc--CCCCcceec----
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLS--QHSNIPDFF----  104 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~--~h~niv~~~----  104 (176)
                      +..+.+.|.+.+.||+|+||.||+|.+.. ++..+|+|.+...    ......+.+|+.++..+.  +||||++++    
T Consensus        68 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~  146 (377)
T 3byv_A           68 LGERPRTLVRGTVLGQEDPYAYLEATDQE-TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  146 (377)
T ss_dssp             SSCCCEEEEEEEEEEEETTEEEEEEEC-C-CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred             cCCCCceEEEcceeecCCCEEEEEEEECC-CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhh
Confidence            45566789999999999999999999877 7899999998742    235567889995444432  899999998    


Q ss_pred             ---eeEEeccC--------Ccc-----eEEEEEecCCCCChhhhcCC-CCCCh-------hhH--hhhhhHHHHHHHHhc
Q psy9091         105 ---GAYMKKHQ--------THS-----EIWFVMQREAEMPPPRALKP-DELDL-------DNL--QDCGDRYELGYVIGS  158 (176)
Q Consensus       105 ---~~~~~~~~--------~~~-----~~~lv~e~~~~g~L~~~l~~-~~~~~-------~~~--~~~~~~~~l~~lh~~  158 (176)
                         +.+...+.        ..+     ..+++|||+ +|+|.+++.. .....       ...  ...+++.+|+|+|..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  225 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  225 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence               55444100        001     388999999 5899999862 11111       121  233778889999999


Q ss_pred             CCCccccccCCCCCcc
Q psy9091         159 GVCADVYEALDTQNVT  174 (176)
Q Consensus       159 ~i~~~v~~~~~~~nv~  174 (176)
                      |+   +|+||||+||.
T Consensus       226 ~i---vHrDikp~NIl  238 (377)
T 3byv_A          226 GL---VHTYLRPVDIV  238 (377)
T ss_dssp             TE---ECSCCCGGGEE
T ss_pred             Ce---ecCCCCHHHEE
Confidence            98   99999999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.79  E-value=1.4e-18  Score=138.34  Aligned_cols=128  Identities=20%  Similarity=0.257  Sum_probs=105.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc-----CCCCcceeceeEEeccC
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS-----QHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~-----~h~niv~~~~~~~~~~~  112 (176)
                      ...+|.+.+.||+|+||.||+|.+.. .+..+|+|.+.........+..|+.++..+.     .|+||+.+++.+..   
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---  170 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHK-VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---  170 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETT-TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE---
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECC-CCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc---
Confidence            44579999999999999999999988 8899999999887666667788888888762     56799999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++|||++ |+|.+++..   ........  ...+++.+|+|+|..++   ||+||||+||.
T Consensus       171 -~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlKp~NIL  232 (429)
T 3kvw_A          171 -RNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI---IHCDLKPENIL  232 (429)
T ss_dssp             -TTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTE---ECSCCSGGGEE
T ss_pred             -CCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeE
Confidence             789999999996 689998862   22343332  23377788999999988   99999999984

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.79  E-value=2.1e-18  Score=131.39  Aligned_cols=140  Identities=19%  Similarity=0.250  Sum_probs=104.1

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      .+..+....+.|.+.+.||+|+||.||+|.+..+  .+..+|+|.+...   ......+.+|+.+++.+ +||||+++++
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~  103 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLG  103 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeE
Confidence            4555666677899999999999999999987541  2347999998753   33456789999999999 9999999999


Q ss_pred             eEEecc-CCcceEEEEEecCCCCChhhhcC-------CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKH-QTHSEIWFVMQREAEMPPPRALK-------PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~-------~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.... ......+++|||+++|+|.+++.       ....+.....  ..+.+.+|.|+|..++   +|+||||+||.
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dikp~NIl  179 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF---LHRDLAARNCM  179 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTC---CCCCCSGGGEE
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCcceEE
Confidence            987632 11124699999999999999983       1223333322  2277778999999998   99999999984

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.79  E-value=9e-19  Score=135.21  Aligned_cols=125  Identities=12%  Similarity=0.135  Sum_probs=103.4

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhh------------------HHHHHHHHHHHHhccCCCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF------------------IDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~------------------~~~~~~e~~~~~~l~~h~ni  100 (176)
                      .++|.+.+.||+|+||.||.+.+   .+..+|+|.+......                  ...+.+|+.++..+ +|+||
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i  105 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYC  105 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTB
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCc
Confidence            46799999999999999999998   4789999998754211                  17789999999999 99999


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhh------cCC---CCCChhhH--hhhhhHHHHHHHHh-cCCCccccccC
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRA------LKP---DELDLDNL--QDCGDRYELGYVIG-SGVCADVYEAL  168 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~---~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~  168 (176)
                      +++++.+..    .+.+++||||+++|+|.++      +..   ...+....  ...+...+|.|+|. .|+   +|+||
T Consensus       106 ~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i---~H~dl  178 (348)
T 2pml_X          106 LTCEGIITN----YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI---CHRDV  178 (348)
T ss_dssp             CCCSEEEES----SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCE---ECCCC
T ss_pred             ceEEEEEee----CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCE---eecCC
Confidence            999999988    7899999999999999999      542   22333322  22367778999998 888   99999


Q ss_pred             CCCCcc
Q psy9091         169 DTQNVT  174 (176)
Q Consensus       169 ~~~nv~  174 (176)
                      +|+||.
T Consensus       179 ~p~Nil  184 (348)
T 2pml_X          179 KPSNIL  184 (348)
T ss_dssp             CGGGEE
T ss_pred             ChHhEE
Confidence            999984

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.79  E-value=6.1e-19  Score=132.29  Aligned_cols=128  Identities=20%  Similarity=0.211  Sum_probs=102.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-------
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-------  111 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-------  111 (176)
                      ..+|++.+.||+|+||.||++.+.. .+..+|+|.+....   ..+.+|+.++..+ +||||+++++.+....       
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~---~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRI-DGKTYVIKRVKYNN---EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETT-TCCEEEEEEEECCS---GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC-----
T ss_pred             ccccceeeeeccCCceEEEEEEEcC-CCeEEEEEEecccc---HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCccccc
Confidence            3569999999999999999999987 78899999997654   2467899999999 9999999999875310       


Q ss_pred             -----CCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -----QTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -----~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                           .....++++|||+++|+|.+++..   ...+....  ...+...+|.|+|..++   +|+||+|+||.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dlkp~Nil  154 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL---INRDLKPSNIF  154 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCCHHHEE
Confidence                 013558999999999999999951   23333222  22377778999999988   99999999984

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=5.1e-19  Score=138.62  Aligned_cols=129  Identities=14%  Similarity=0.168  Sum_probs=101.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCC--CeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNG--NKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ...|.+.+.||+|+||.||+|.+..+.  ...+|+|.+...  ......+.+|+.+++.+ +||||+++++.+...   .
T Consensus        88 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~---~  163 (373)
T 3c1x_A           88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS---E  163 (373)
T ss_dssp             TEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCC---S
T ss_pred             hceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC---C
Confidence            345888999999999999999875312  246899988753  23567789999999999 999999999987542   4


Q ss_pred             ceEEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +..++||||+++|+|.+++...  ........  ..++..+|+|+|..++   +|+||||+||.
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~NIl  224 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF---VHRDLAARNCM  224 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCccchheEE
Confidence            6789999999999999999732  23332222  2377788999999998   99999999984

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.79  E-value=3.4e-19  Score=133.69  Aligned_cols=129  Identities=22%  Similarity=0.229  Sum_probs=102.3

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +....+.|++.+.||+|+||.||++.+   .+..+|+|.+.... ....+.+|+.++..+ +|+|++++++.+...   .
T Consensus        16 ~~~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~---~   87 (278)
T 1byg_A           16 WALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEE---K   87 (278)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC----
T ss_pred             ccCChhhceEEeEEecCCCceEEEEEE---cCCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcC---C
Confidence            445567899999999999999999987   46789999987643 346788999999999 999999999987552   4


Q ss_pred             ceEEEEEecCCCCChhhhcCCC---CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD---ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.++++|||+++|+|.+++...   ..+....  ...+...+|+++|..|+   +|+||+|+||.
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil  149 (278)
T 1byg_A           88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVL  149 (278)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc---cccCCCcceEE
Confidence            5789999999999999998621   1333222  22367778999999998   99999999984

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.79  E-value=1.4e-18  Score=135.73  Aligned_cols=130  Identities=20%  Similarity=0.289  Sum_probs=103.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC--
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~--  112 (176)
                      ..++|.+.+.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.....  
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~  117 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLR  117 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSST
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECC-CCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcc
Confidence            34679999999999999999999988 8899999998763   23466788999999999 99999999999977210  


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....+++|||++ |+|.+++... .+....  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus       118 ~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~NIl  176 (371)
T 4exu_A          118 NFYDFYLVMPFMQ-TDLQKIMGME-FSEEKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNLA  176 (371)
T ss_dssp             TCCCCEEEEECCC-EEHHHHTTSC-CCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             cceeEEEEEcccc-ccHHHHhhcC-CCHHHHHHHHHHHHHHHHHHHHCCC---cCCCcCHHHeE
Confidence            0112499999998 6888887532 333332  22377788999999998   99999999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.79  E-value=2e-18  Score=133.26  Aligned_cols=129  Identities=14%  Similarity=0.184  Sum_probs=98.7

Q ss_pred             CCCCCeEEee-EEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHH-HHHhccCCCCcceeceeEEeccCCc
Q psy9091          37 DCGDRYELGY-VIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYR-MLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        37 ~~~~~~~~~~-~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~-~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      ...++|.+.+ .||+|+||.||++.+.. ++..+|+|.+.......    .++. .+..+ +|+|++++++.+.......
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~----~e~~~~~~~~-~h~~i~~~~~~~~~~~~~~   98 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRR-TGQKCALKLLYDSPKAR----QEVDHHWQAS-GGPHIVCILDVYENMHHGK   98 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEESSHHHH----HHHHHHHHHT-TSTTBCCEEEEEEEEETTE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECC-CCCEEEEEEecCcHHHH----HHHHHHHHhc-CCCChHHHHHHHhhccCCC
Confidence            3456799865 69999999999999987 78999999997754322    2333 24445 9999999999987633334


Q ss_pred             ceEEEEEecCCCCChhhhcCCC---CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPD---ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++||||+++|+|.+++...   ..+.....  ..+.+.+|.|+|..|+   +|+||||+||.
T Consensus        99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i---vH~dlkp~NIl  160 (336)
T 3fhr_A           99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI---AHRDVKPENLL  160 (336)
T ss_dssp             EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEE
Confidence            5689999999999999999732   23333322  2277778999999988   99999999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.79  E-value=1.3e-18  Score=132.74  Aligned_cols=137  Identities=20%  Similarity=0.246  Sum_probs=109.1

Q ss_pred             CcccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccC-CCCccee
Q psy9091          28 DELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQ-HSNIPDF  103 (176)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~-h~niv~~  103 (176)
                      ....++.+.....+|.+.+.||+|+||.||++.+.  .+..+|+|.+...   ......+.+|+.++..+.. |+|++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   93 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   93 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence            44566777777888999999999999999999885  4778999998753   3456678999999999843 6999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++.+..    .+.++++|| +.+++|.+++. ....+....  ...+.+.+|.|+|..++   +|+||+|+||.
T Consensus        94 ~~~~~~----~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIl  159 (313)
T 3cek_A           94 YDYEIT----DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI---VHSDLKPANFL  159 (313)
T ss_dssp             EEEEEC----SSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             EEEeec----CCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCcccEE
Confidence            999988    788999999 66799999987 334443332  22377788999999998   99999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.78  E-value=7.5e-19  Score=133.27  Aligned_cols=128  Identities=20%  Similarity=0.318  Sum_probs=100.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .++|.+.+.||+|+||.||.+.+.. ++..+|+|.+....     .....+.+|+.+++.+ +|+||+++++.+....  
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--   79 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSE-TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEE--   79 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTT-TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---
T ss_pred             ccceeEeeEEecCCCeEEEEEEECC-CCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCC--
Confidence            3579999999999999999999987 78899999987532     2456789999999999 9999999999984311  


Q ss_pred             cceEEEEEecCCCCChhhhcC---CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK---PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....++||||+++| |.+++.   ....+....  ...+...+|.|+|..++   +|+||+|+||.
T Consensus        80 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---~H~dlkp~NIl  141 (305)
T 2wtk_C           80 KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI---VHKDIKPGNLL  141 (305)
T ss_dssp             --CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCcccEE
Confidence            56799999999976 666654   233333332  22377788999999998   99999999984

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.78  E-value=1.6e-18  Score=132.13  Aligned_cols=124  Identities=21%  Similarity=0.193  Sum_probs=97.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      +.|.+.+.||+|+||.||++.+   .+..+|+|.+.... ....+.+|+.++..+ +||||+++++.+..      ..++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~------~~~l   76 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKW---RAKDVAIKQIESES-ERKAFIVELRQLSRV-NHPNIVKLYGACLN------PVCL   76 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE---TTEEEEEEECSSTT-HHHHHHHHHHHHHHC-CCTTBCCEEEBCTT------TTEE
T ss_pred             hHeeeeeEeecCCCceEEEEEE---CCeeEEEEEecChh-HHHHHHHHHHHHhcC-CCCCcCeEEEEEcC------CcEE
Confidence            5699999999999999999987   45789999987543 356789999999999 99999999998743      3789


Q ss_pred             EEecCCCCChhhhcCCCC----CChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPDE----LDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~----~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.+++....    .......  ..+...+|+|+|..+-.+++|+||||+||.
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIl  137 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL  137 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEE
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEE
Confidence            999999999999996321    2222221  226677899999933223399999999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.7e-19  Score=137.43  Aligned_cols=133  Identities=16%  Similarity=0.145  Sum_probs=96.5

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-------hHHHHHHHHHHHHhcc---CCCCccee
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-------FIDDIKEEYRMLRDLS---QHSNIPDF  103 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-------~~~~~~~e~~~~~~l~---~h~niv~~  103 (176)
                      ......++|.+.+.||+|+||.||++.+.. .+..+|+|.+.....       ....+..|+.++..+.   +|+||+++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLT-DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTT-TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEcc-CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            345567789999999999999999999987 788999999875421       1223556888777764   79999999


Q ss_pred             ceeEEeccCCcceEEEEEec-CCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQR-EAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++.+..    .+..+++||+ +.+++|.+++. .........  ...+...+|+|+|..++   +|+||+|+||.
T Consensus       104 ~~~~~~----~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil  171 (312)
T 2iwi_A          104 LDWFET----QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGV---VHRDIKDENIL  171 (312)
T ss_dssp             EEEC---------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTE---ECCCCSGGGEE
T ss_pred             EEEEec----CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChhhEE
Confidence            999988    7889999999 78999999986 333443332  22377788999999998   99999999984

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.78  E-value=1.1e-18  Score=135.85  Aligned_cols=132  Identities=14%  Similarity=0.200  Sum_probs=98.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCC-----CeEEEEEEeecChhh------------HHHHHHHHHHHHhccCCCC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNG-----NKKVSIKVQKINPEF------------IDDIKEEYRMLRDLSQHSN   99 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~-----~~~~aik~i~~~~~~------------~~~~~~e~~~~~~l~~h~n   99 (176)
                      ...+.|.+.+.||+|+||.||+|.+.. .     +..+|+|.+......            ...+..|+..+..+ .|+|
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~  109 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNS-SESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLG  109 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECC-SSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecC-ccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCC
Confidence            345689999999999999999998865 3     368999998764210            11233455556666 8999


Q ss_pred             cceeceeEEeccCCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         100 IPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       100 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+++++.+.........+++||||+ +|+|.+++..  ...+.....  ..+++.+|+|+|..++   +|+||||+||.
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i---iHrDlkp~Nil  184 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEY---VHGDIKASNLL  184 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---EEecCCHHHEE
Confidence            9999999877322235689999999 9999999962  344443332  2277788999999988   99999999984

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.78  E-value=2.1e-18  Score=134.21  Aligned_cols=132  Identities=17%  Similarity=0.236  Sum_probs=105.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc----------CCCCcceeceeE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS----------QHSNIPDFFGAY  107 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~----------~h~niv~~~~~~  107 (176)
                      ...+|.+.+.||+|+||.||++.+.. .+..+|+|.+.........+..|+.++..+.          .|+||+++++.+
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMV-NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecC-CCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            34679999999999999999999987 8899999999877666677888999888872          278999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      .........++++|||+ +++|.+++..   ...+....  ...+++.+|+|+|.. |+   +|+||||+||.
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~i---vH~Dikp~NIl  164 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI---IHTDIKPENVL  164 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE---ECSCCSGGGEE
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCE---EecCCChHHeE
Confidence            86322234799999999 8999999862   22343332  223777889999997 88   99999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.78  E-value=2.8e-18  Score=133.04  Aligned_cols=129  Identities=20%  Similarity=0.291  Sum_probs=102.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC--C
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ--T  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~--~  113 (176)
                      ..+|.+.+.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|+||+++++.+.....  .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGG
T ss_pred             CceEEEeeeEecCCCeEEEEEEECC-CCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEeccccccc
Confidence            3579999999999999999999987 8899999998753   23456788999999999 99999999999976210  0


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+++|||++ |+|.+++.. ..+....  ...+.+.+|+|+|..|+   +|+||+|+||.
T Consensus       101 ~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~~i---vH~dlkp~NIl  158 (353)
T 3coi_A          101 FYDFYLVMPFMQ-TDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNLA  158 (353)
T ss_dssp             CCCCEEEEECCS-EEGGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCCGGGEE
T ss_pred             ceeEEEEecccc-CCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEe
Confidence            123599999998 688888753 2333332  22377788999999998   99999999984

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.78  E-value=4.1e-18  Score=131.42  Aligned_cols=128  Identities=16%  Similarity=0.203  Sum_probs=102.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCC-eEEEEEEeecChhhHHHHHHHHHHHHhccCCCC------cceeceeEEe
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGN-KKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN------IPDFFGAYMK  109 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n------iv~~~~~~~~  109 (176)
                      ...++|.+.+.||+|+||.||++.+.. .+ ..+|+|.+.........+..|+.+++.+ .|++      ++.+.+.+..
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHA-RGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETT-TTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEE
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecC-CCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeee
Confidence            345689999999999999999999876 55 6899999987766667788899999887 6554      8888888888


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-C--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-P--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.++++|||+ +|++.+++. .  ...+.....  ..+++.+|+|+|..|+   +|+||||+||.
T Consensus        94 ----~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i---vH~Dlkp~NIl  155 (355)
T 2eu9_A           94 ----HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL---THTDLKPENIL  155 (355)
T ss_dssp             ----TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             ----CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEE
Confidence                78999999999 567777765 2  234443322  2377788999999988   99999999984

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.78  E-value=8.7e-19  Score=136.84  Aligned_cols=133  Identities=11%  Similarity=0.015  Sum_probs=91.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhcc-CCCCcceec-------
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLS-QHSNIPDFF-------  104 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~-~h~niv~~~-------  104 (176)
                      .....|.+.+.||+|+||.||+|.+.. ++..+|+|.+....    .....+..|+.++..+. .|||+++++       
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~  137 (371)
T 3q60_A           59 QGERKLKLVEPLRVGDRSVVFLVRDVE-RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS  137 (371)
T ss_dssp             CCEEEEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCC
T ss_pred             CCceeeeeeeeccCCCCEEEEEEEECC-CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee
Confidence            334459999999999999999999987 88999999998742    34556788877666663 499988755       


Q ss_pred             eeEEeccC-------------CcceEEEEEecCCCCChhhhcCC---CCCChhh------Hhh-hhhHHHHHHHHhcCCC
Q psy9091         105 GAYMKKHQ-------------THSEIWFVMQREAEMPPPRALKP---DELDLDN------LQD-CGDRYELGYVIGSGVC  161 (176)
Q Consensus       105 ~~~~~~~~-------------~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~------~~~-~~~~~~l~~lh~~~i~  161 (176)
                      +.+..+..             ....+|+||||++ |+|.+++..   .......      ... .+++.+|+|+|..|+ 
T Consensus       138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i-  215 (371)
T 3q60_A          138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGL-  215 (371)
T ss_dssp             EEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE-
T ss_pred             hheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC-
Confidence            33332110             0155899999999 899999972   1222212      133 477889999999998 


Q ss_pred             ccccccCCCCCcc
Q psy9091         162 ADVYEALDTQNVT  174 (176)
Q Consensus       162 ~~v~~~~~~~nv~  174 (176)
                        |||||||+||.
T Consensus       216 --vHrDikp~NIl  226 (371)
T 3q60_A          216 --VHGHFTPDNLF  226 (371)
T ss_dssp             --EETTCSGGGEE
T ss_pred             --ccCcCCHHHEE
Confidence              99999999984

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.77  E-value=2.4e-18  Score=143.67  Aligned_cols=130  Identities=23%  Similarity=0.287  Sum_probs=104.3

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ....++|.+.+.||+|+||.||+|.+...  .+..+|+|.+...  ......+.+|+.+++.+ +||||+++++.+..  
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~--  462 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVITE--  462 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS--
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec--
Confidence            34456799999999999999999988540  2357899988753  33456789999999999 99999999998844  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         +.+|+||||+++|+|.++++.  ...+.....  ..+...+|+|+|..|+   +|+||||+||.
T Consensus       463 ---~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vHrDikp~NIL  523 (656)
T 2j0j_A          463 ---NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---VHRDIAARNVL  523 (656)
T ss_dssp             ---SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ---CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccchHhEE
Confidence               668999999999999999972  234443322  2377788999999998   99999999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.77  E-value=1.9e-18  Score=133.02  Aligned_cols=127  Identities=17%  Similarity=0.229  Sum_probs=100.6

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHh--ccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRD--LSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~--l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .++|.+.+.||+|+||.||++.+   .+..+|+|.+....  ...+..|..++..  + +|+||+++++.+.........
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l-~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECGGG--HHHHHHHHHHHHHSCC-CCTTBCCEEEEEECCCSSCCC
T ss_pred             cccEEEEeeecCCCCcEEEEEEE---cCccEEEEEeCchh--HHHHHHHHHHHHHhhc-CCCcEEEEEeeecccCCccce
Confidence            35799999999999999999988   46899999986543  3557788888877  5 999999999999873211137


Q ss_pred             EEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHH--------hcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVI--------GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh--------~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||+++|+|.+++..........  ...+...+|+|+|        ..++   +|+||||+||.
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i---vH~Dlkp~NIl  179 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI---AHRDLKSKNIL  179 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEE---ECSCCSGGGEE
T ss_pred             eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCe---eeCCCCHHHEE
Confidence            999999999999999997433443332  2227777899999        7777   99999999984

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.77  E-value=1.5e-18  Score=134.42  Aligned_cols=132  Identities=20%  Similarity=0.238  Sum_probs=102.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc--
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--  111 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--  111 (176)
                      +..++|.+.+.||+|+||.||++.+.. ++..+|+|.+....   .....+.+|+.++..+ +|+||+++++.+....  
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   91 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRK-TGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASP   91 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETT-TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC---
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECC-CCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccc
Confidence            445689999999999999999999987 88999999886532   2345678899999999 9999999999987632  


Q ss_pred             --CCcceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 --QTHSEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 --~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        ...+.+++||||+++ +|.+.+..  ........  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus        92 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---vH~Dlkp~NIl  156 (351)
T 3mi9_A           92 YNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI---LHRDMKAANVL  156 (351)
T ss_dssp             -----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             cccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCCCHHHEE
Confidence              013468999999984 77666652  33443332  22377788999999998   99999999984

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.77  E-value=6.7e-18  Score=132.33  Aligned_cols=130  Identities=21%  Similarity=0.278  Sum_probs=104.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCC-----CcceeceeEEec
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS-----NIPDFFGAYMKK  110 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~-----niv~~~~~~~~~  110 (176)
                      ....++|.+.+.||+|+||.||+|.+.. .+..+|+|.+.........+..|+.++..+..|+     +++.+.+.+.. 
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  127 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRV-EQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-  127 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcC-CCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-
Confidence            4445789999999999999999999987 7889999999877656677888888888874455     48999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHH--hcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVI--GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh--~~~i~~~v~~~~~~~nv~  174 (176)
                         .+.+++||||++ |+|.+++..   ........  ...+.+.+|.|+|  ..|+   ||+||||+||.
T Consensus       128 ---~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~i---vHrDlkp~NIl  191 (382)
T 2vx3_A          128 ---RNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSI---IHCDLKPENIL  191 (382)
T ss_dssp             ---TTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCE---ECCCCSGGGEE
T ss_pred             ---CCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCE---EcCCCCcccEE
Confidence               789999999996 599999862   22343332  2237777899999  4566   99999999984

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.77  E-value=2.5e-18  Score=133.57  Aligned_cols=131  Identities=17%  Similarity=0.208  Sum_probs=102.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC------------hhhHHHHHHHHHHHHhccCCCCcceec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------------PEFIDDIKEEYRMLRDLSQHSNIPDFF  104 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~------------~~~~~~~~~e~~~~~~l~~h~niv~~~  104 (176)
                      ...++|.+.+.||+|+||.||++.+.  .+..+|+|.+...            ......+.+|+.++..+ +||||++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~   95 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLR   95 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCS
T ss_pred             HhccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCcccee
Confidence            34567999999999999999999885  4788999988542            11246789999999999 999999999


Q ss_pred             eeEEecc-CCcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         105 GAYMKKH-QTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       105 ~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+.... .....+++||||++ |+|.+++...  ..+....  ...+.+.+|.|+|..|+   +|+||||+||.
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlkp~NIl  166 (362)
T 3pg1_A           96 DIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNIL  166 (362)
T ss_dssp             EEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             eeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcC---EecCCChHHEE
Confidence            9986532 22457999999998 6888887632  3343332  22377788999999998   99999999984

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.77  E-value=2.3e-18  Score=130.74  Aligned_cols=122  Identities=16%  Similarity=0.198  Sum_probs=99.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC-----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN-----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~-----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      |...+.||+|+||.||+|.+   .+..+|+|.+...     ......+.+|+.+++.+ +||||+++++.+..    .+.
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~  104 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSD----GDD  104 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECS----SSS
T ss_pred             cccCCccccCCCeEEEEEEE---CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEec----CCc
Confidence            44558999999999999987   4678999988653     23456789999999999 99999999999988    788


Q ss_pred             EEEEEecCCCCChhhhcCC----CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP----DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+++|+|.+++..    ...+....  ...+...+|+|+|..|+   +|+||+|+||.
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~dlkp~Nil  165 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANIL  165 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe---ecCCCCHHHEE
Confidence            9999999999999999852    22333222  22266778999999998   99999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.77  E-value=5.8e-18  Score=127.73  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=99.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeE-EeccCCcce
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAY-MKKHQTHSE  116 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~-~~~~~~~~~  116 (176)
                      ..++|++.+.||+|+||.||++.+.. .+..+|+|.+..... ...+.+|+.++..+ .|++++..+..+ ..    ...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~----~~~   79 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIA-AGEEVAIKLECVKTK-HPQLHIESKIYKMM-QGGVGIPTIRWCGAE----GDY   79 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEEESCSS-CCHHHHHHHHHHHH-TTSTTCCCEEEEEEE----TTE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcC-CCcEEEEEEecCCcc-hhHHHHHHHHHHHh-hcCCCCCccccccCC----CCc
Confidence            35679999999999999999999987 889999999876432 23578899999999 776655555554 44    678


Q ss_pred             EEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++|||+ +|+|.+++.  ....+....  ...+...+|+|+|..++   +|+||||+||.
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~dlkp~NIl  137 (296)
T 3uzp_A           80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF---IHRDVKPDNFL  137 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHeE
Confidence            99999999 899999986  333444332  22277788999999998   99999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.77  E-value=3.1e-19  Score=136.19  Aligned_cols=134  Identities=21%  Similarity=0.290  Sum_probs=108.5

Q ss_pred             cccCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          29 ELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      ......+....+.|++.+.||+|+||.||++.+..    .+++|.+....   .....+.+|+.++..+ +|+||+++++
T Consensus        22 ~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~----~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~   96 (319)
T 2y4i_B           22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG----EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMG   96 (319)
T ss_dssp             CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS----SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCE
T ss_pred             ccccccccCCHHHeEEeeEeccCCceEEEEEEEcC----eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEE
Confidence            34566777778899999999999999999998744    48899887532   2234567888999998 9999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCC--CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPD--ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..    ...++++|||+++++|.+++...  ..+....  ...++..+|+|+|..|+   +|+||+|+||.
T Consensus        97 ~~~~----~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---~H~dlkp~NIl  162 (319)
T 2y4i_B           97 ACMS----PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI---LHKDLKSKNVF  162 (319)
T ss_dssp             EEEC----SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTC---CCCCCCSTTEE
T ss_pred             EEec----CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccCCChhhEE
Confidence            9988    78899999999999999999732  2333332  22377788999999998   99999999984

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.76  E-value=5.3e-18  Score=127.85  Aligned_cols=127  Identities=17%  Similarity=0.228  Sum_probs=95.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeE-EeccCCcc
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAY-MKKHQTHS  115 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~-~~~~~~~~  115 (176)
                      ...++|++.+.||+|+||.||++.+.. .+..+|+|.+..... ...+..|+.++..+ .|++++..+..+ ..    ..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~----~~   78 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIA-AGEEVAIKLECVKTK-HPQLHIESKIYKMM-QGGVGIPTIRWCGAE----GD   78 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEE----TT
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcC-CCceEEEEeeccccc-chHHHHHHHHHHHh-cCCCCCCeeeeecCC----CC
Confidence            345679999999999999999999987 889999998765432 23477899999998 666655555554 45    78


Q ss_pred             eEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+++|||+ +|+|.+++.  ....+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus        79 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i---vH~Dlkp~NIl  137 (296)
T 4hgt_A           79 YNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF---IHRDVKPDNFL  137 (296)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHee
Confidence            899999999 899999986  3344443332  2277788999999998   99999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.76  E-value=1.4e-18  Score=142.80  Aligned_cols=101  Identities=14%  Similarity=0.116  Sum_probs=85.0

Q ss_pred             CeEEEEEEeecC-----------hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcC
Q psy9091          66 NKKVSIKVQKIN-----------PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALK  134 (176)
Q Consensus        66 ~~~~aik~i~~~-----------~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  134 (176)
                      +..+++|.+...           ......+.+|+.+|+.+..|+||+++++.+.+    .+.+||||||++||+|.++|+
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed----~~~~yLVMEyv~G~~L~d~i~  334 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN----AQSGWLVMEKLPGRLLSDMLA  334 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC----SSEEEEEEECCCSEEHHHHHH
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE----CCEEEEEEecCCCCcHHHHHH
Confidence            456899998653           12355799999999999889999999999999    899999999999999999998


Q ss_pred             -CCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         135 -PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       135 -~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+..+... ...+++.+|+|+|++||   |||||||+||.
T Consensus       335 ~~~~l~~~~-I~~QIl~AL~ylH~~GI---IHRDIKPeNIL  371 (569)
T 4azs_A          335 AGEEIDREK-ILGSLLRSLAALEKQGF---WHDDVRPWNVM  371 (569)
T ss_dssp             TTCCCCHHH-HHHHHHHHHHHHHHTTC---EESCCCGGGEE
T ss_pred             hCCCCCHHH-HHHHHHHHHHHHHHCCc---eeccCchHhEE
Confidence             34444432 45588889999999999   99999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.76  E-value=6.4e-18  Score=134.74  Aligned_cols=126  Identities=12%  Similarity=0.104  Sum_probs=97.9

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...+.|...+.||+|+||.||.+.. . .+..||+|.+....  ...+.+|+.++..+.+||||+++++.+..    ...
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~~~-~-~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~----~~~   83 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQGS-F-QGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETT----DRF   83 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEEEE-S-SSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEEC----SSE
T ss_pred             hhhheeeccCeEeeCCCeEEEEEEE-E-CCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec----CCe
Confidence            3445577789999999999986544 3 57899999987542  34578899999876589999999999988    789


Q ss_pred             EEEEEecCCCCChhhhcCCCCC-Chh---------hHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPDEL-DLD---------NLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~~~-~~~---------~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||++ |+|.+++..... ...         .....+++.+|+|+|..++   +|+||||+||.
T Consensus        84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDLkp~NIL  147 (434)
T 2rio_A           84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNIL  147 (434)
T ss_dssp             EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCc---cccCCChHhEE
Confidence            999999996 699999862211 110         1134477889999999988   99999999984

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.76  E-value=2.6e-18  Score=133.19  Aligned_cols=130  Identities=17%  Similarity=0.144  Sum_probs=87.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc---CCcc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH---QTHS  115 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~---~~~~  115 (176)
                      .++|.+.+.||+|+||.||++.+.. ++..+|+|.+............++..+..+ +|+||+++++.+....   ....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKS-TGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             HTTEEEC----------CEEEEETT-TCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccce
Confidence            3579999999999999999999987 788999999876544444566777888888 9999999999997632   1123


Q ss_pred             eEEEEEecCCCCChhhhc----C-CCCCChhhH--hhhhhHHHHHHHH--hcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRAL----K-PDELDLDNL--QDCGDRYELGYVI--GSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l----~-~~~~~~~~~--~~~~~~~~l~~lh--~~~i~~~v~~~~~~~nv~  174 (176)
                      .++++|||+++ +|.+.+    . .........  ...+.+.+|.|+|  ..|+   +|+||||+||.
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~i---vH~Dlkp~NIl  163 (360)
T 3e3p_A          100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV---CHRDIKPHNVL  163 (360)
T ss_dssp             EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCC---BCSCCCGGGEE
T ss_pred             eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCe---ecCcCCHHHEE
Confidence            48999999986 444333    2 222333222  2236777899999  8888   99999999984

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.76  E-value=2.6e-18  Score=133.25  Aligned_cols=123  Identities=15%  Similarity=0.173  Sum_probs=96.9

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCC--------CeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcce--------
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNG--------NKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPD--------  102 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~--------~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~--------  102 (176)
                      .++|.+.+.||+|+||.||++.+.. +        +..+|+|.+...    ..+.+|+.++..+ .|+|+++        
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~-t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~  114 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTS-TLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYST  114 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC------------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecC-CccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccC
Confidence            5689999999999999999999865 3        568999998765    3477899999998 8998887        


Q ss_pred             -------eceeEEeccCCcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCC
Q psy9091         103 -------FFGAYMKKHQTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDT  170 (176)
Q Consensus       103 -------~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~  170 (176)
                             +++.+...   ...+++||||+ +|+|.+++..   ...+.....  ..++..+|+|+|..++   +|+||||
T Consensus       115 ~~~~i~~~~~~~~~~---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dikp  187 (352)
T 2jii_A          115 PLLAIPTCMGFGVHQ---DKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY---VHGNVTA  187 (352)
T ss_dssp             TTCSCCCCCEEEEET---TTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC---BCSCCCG
T ss_pred             CccCccchhhccccC---CcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCCH
Confidence                   45555432   57899999999 9999999972   334443332  2377788999999998   9999999


Q ss_pred             CCcc
Q psy9091         171 QNVT  174 (176)
Q Consensus       171 ~nv~  174 (176)
                      +||.
T Consensus       188 ~NIl  191 (352)
T 2jii_A          188 ENIF  191 (352)
T ss_dssp             GGEE
T ss_pred             HHEE
Confidence            9984

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.76  E-value=1.1e-17  Score=128.24  Aligned_cols=130  Identities=13%  Similarity=0.203  Sum_probs=101.0

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHH-HHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYR-MLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~-~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      +.-..+.|++.+.||+|+||.||++.+.. ++..+|+|.+...  ......+..|+. +++.+ +|+||+++++.+..  
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~--   92 (327)
T 3aln_A           17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKP-SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFR--   92 (327)
T ss_dssp             ECCCSCSEEC-CEEEECSSEEEEEEEETT-TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEEC--
T ss_pred             cccCHHHhhehheeccCCCEEEEEEEEcC-CCCEEEEEEeecccCchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEe--
Confidence            34455789999999999999999999987 7899999999764  234445666666 55555 99999999999988  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC------CCCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK------PDELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                        .+..+++|||+++ +|.+++.      .........  ...+...+|.|+|.. |+   +|+||+|+||.
T Consensus        93 --~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~i---vH~dlkp~NIl  158 (327)
T 3aln_A           93 --EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKI---IHRDIKPSNIL  158 (327)
T ss_dssp             --SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSC---CCSCCCGGGEE
T ss_pred             --CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCE---eECCCCHHHEE
Confidence              7899999999984 7777764      233333222  223667789999998 88   99999999984

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.76  E-value=3.2e-18  Score=135.92  Aligned_cols=126  Identities=21%  Similarity=0.207  Sum_probs=97.1

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcceE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEI  117 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~~~  117 (176)
                      ..|.+.+.||+|+||.||+|.+.. ++..||+|.+.....   ...+|+.+++.+ +|+||+++++.+....  .....+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~vaiK~~~~~~~---~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCD-SGELVAIKKVLQDKR---FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECCTT---SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECC-CCcEEEEEEecccch---hHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeE
Confidence            369999999999999999999987 789999999876432   234689999999 9999999999886532  113457


Q ss_pred             EEEEecCCCCChhhhcC-----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++ ++.+++.     .........  ...+++.+|+|+|..|+   +||||||+||.
T Consensus       129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~NIL  188 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLL  188 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE---ECSCCSGGGEE
T ss_pred             Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCChhhEE
Confidence            899999985 5665543     223333222  23377888999999988   99999999984

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.75  E-value=3.8e-18  Score=137.81  Aligned_cols=127  Identities=19%  Similarity=0.259  Sum_probs=101.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..++|.+.+.||+|+||.||+|.+.. .+..||+|.+..... ...+..|+.++..+..++++..+..++..    ....
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~----~~~~   78 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVE----GDYN   78 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETT-TCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEE----TTEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECC-CCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEee----CCEE
Confidence            45679999999999999999999987 789999998775432 23478899999998444666666666666    7889


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+ +++|.+++.  ...........  .+++.+|+|||..++   ||+||||+||.
T Consensus        79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI---vHrDIKP~NIL  135 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF---LHRDIKPDNFL  135 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccCcceEE
Confidence            9999999 899999986  34444444322  277788999999998   99999999985

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.75  E-value=8.4e-18  Score=128.57  Aligned_cols=133  Identities=20%  Similarity=0.282  Sum_probs=99.3

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEec-CCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhcc--CCCCcceeceeEEec
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDT-QNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKK  110 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~  110 (176)
                      ...++|++.+.||+|+||.||++.+. . .+..+|+|.+....   .....+.+|+.+++.+.  .||||+++++.+...
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCC-CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence            34467999999999999999999985 4 57889999886431   11224556766666543  899999999998721


Q ss_pred             c-CCcceEEEEEecCCCCChhhhcCC---CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 H-QTHSEIWFVMQREAEMPPPRALKP---DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~-~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      . .....++++|||++ |+|.+++..   .........  ..+...+|.|+|..|+   +|+||+|+||.
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi---~H~dlkp~Nil  152 (326)
T 1blx_A           87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNIL  152 (326)
T ss_dssp             ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCCHHHeE
Confidence            1 11678999999998 699999862   223333322  2277778999999998   99999999984

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.75  E-value=2.4e-18  Score=129.54  Aligned_cols=128  Identities=19%  Similarity=0.231  Sum_probs=95.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCC--eEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGN--KKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      ..++|++.+.||+|+||.||++.+....+  ..+|+|.+...    ......+.+|+.++..+ +|+||+++++.+..  
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~--   92 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT--   92 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS--
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcc--
Confidence            34579999999999999999998643122  36899988753    23456789999999999 99999999999876  


Q ss_pred             CCcceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         ...+++|||+++|+|.+++..  ........  ...+...+|.++|..++   +|+||+|+||.
T Consensus        93 ---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dikp~Nil  153 (291)
T 1u46_A           93 ---PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF---IHRDLAARNLL  153 (291)
T ss_dssp             ---SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             ---CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCchheEE
Confidence               348999999999999999862  23333332  22377778999999988   99999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.75  E-value=1.8e-18  Score=132.53  Aligned_cols=133  Identities=15%  Similarity=0.182  Sum_probs=105.6

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh-------hHHHHHHHHHHHHhcc-CCCCcceece
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE-------FIDDIKEEYRMLRDLS-QHSNIPDFFG  105 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~-------~~~~~~~e~~~~~~l~-~h~niv~~~~  105 (176)
                      ......++|++.+.||+|+||.||++.+.. .+..+|+|.+.....       ....+..|+.++..+. .|+|++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETT-TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            345567789999999999999999999987 889999999875421       1234667888999884 3699999999


Q ss_pred             eEEeccCCcceEEEEEecCCC-CChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAE-MPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+..    .+..+++||++.+ ++|.+++. .........  ...+++.+|+|+|..++   +|+||||+||.
T Consensus       116 ~~~~----~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp~NIl  181 (320)
T 3a99_A          116 WFER----PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENIL  181 (320)
T ss_dssp             EEEC----SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEec----CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc---EeCCCCHHHEE
Confidence            9988    7889999999976 89999986 333443332  22377788999999998   99999999984

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.75  E-value=4.5e-18  Score=135.64  Aligned_cols=127  Identities=13%  Similarity=0.061  Sum_probs=98.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ......|.+.+.||+|+||.|+.... . .+..||+|.+.....  ..+.+|+.+++.+.+||||+++++.+..    ..
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~-~-~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~----~~   91 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGM-F-DNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKD----RQ   91 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEE-S-SSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEE----TT
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEE-e-CCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEec----CC
Confidence            33445699999999999999664333 2 578899999865421  2246788999987679999999999988    78


Q ss_pred             eEEEEEecCCCCChhhhcCCCC--C-C-hhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPDE--L-D-LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~~--~-~-~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|++|||++ |+|.+++....  . . .......+++.+|+|+|..++   +|+||||+||.
T Consensus        92 ~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlKp~NIl  150 (432)
T 3p23_A           92 FQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI---VHRDLKPHNIL  150 (432)
T ss_dssp             EEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC---CCCCCSTTSEE
T ss_pred             EEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC---EeCCCCHHHEE
Confidence            9999999997 69999986221  1 1 111233477889999999998   99999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.74  E-value=6.4e-18  Score=130.72  Aligned_cols=132  Identities=20%  Similarity=0.254  Sum_probs=96.0

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecChh------------hHHHHHHHHHHHHhccCCCCccee
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKINPE------------FIDDIKEEYRMLRDLSQHSNIPDF  103 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~~~------------~~~~~~~e~~~~~~l~~h~niv~~  103 (176)
                      ..++|.+.+.||+|+||.||+|.+...  .+..+|+|.+.....            ....+..|+..+..+ +|+||+++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~  113 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLF  113 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCE
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCccee
Confidence            346799999999999999999998530  246799999876421            112356788888888 99999999


Q ss_pred             ceeEEeccCCcceEEEEEecCCCCChhhhcCC-CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         104 FGAYMKKHQTHSEIWFVMQREAEMPPPRALKP-DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       104 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++.+.........+++||||+ +++|.+++.. ...+.....  ..+.+.+|+|+|..++   +|+||||+||.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dlkp~NIl  183 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEY---VHGDIKAANLL  183 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCcCHHHEE
Confidence            999876333347799999999 9999999972 334443332  2277788999999988   99999999984

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.74  E-value=2.7e-17  Score=124.28  Aligned_cols=117  Identities=18%  Similarity=0.157  Sum_probs=91.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------------------hhHHHHHHHHHHHHhccCCCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------------------EFIDDIKEEYRMLRDLSQHSNI  100 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------------------~~~~~~~~e~~~~~~l~~h~ni  100 (176)
                      ..|.+.+.||+|+||.||.|.+ . ++..+|+|.++...                   .....+.+|+.++..+ .  | 
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~-~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~--~-  163 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-E-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-Q--G-  163 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-T-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-T--T-
T ss_pred             eEEEecCEeccCCCceEEEEEe-C-CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-c--C-
Confidence            3455669999999999999999 6 78999999986431                   1345689999999998 5  5 


Q ss_pred             ceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         101 PDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       101 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++.+.+..     +..|+||||++||+|.+ +..   ........+...+|.++|..|+   +|+||||+||.
T Consensus       164 ~~v~~~~~~-----~~~~lvmE~~~g~~L~~-l~~---~~~~~i~~qi~~~l~~lH~~gi---iHrDlkp~NIL  225 (282)
T 1zar_A          164 LAVPKVYAW-----EGNAVLMELIDAKELYR-VRV---ENPDEVLDMILEEVAKFYHRGI---VHGDLSQYNVL  225 (282)
T ss_dssp             SSSCCEEEE-----ETTEEEEECCCCEEGGG-CCC---SCHHHHHHHHHHHHHHHHHTTE---ECSCCSTTSEE
T ss_pred             CCcCeEEec-----cceEEEEEecCCCcHHH-cch---hhHHHHHHHHHHHHHHHHHCCC---EeCCCCHHHEE
Confidence            666666544     55799999999999998 532   2222334578889999999998   99999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=3.8e-17  Score=124.41  Aligned_cols=133  Identities=16%  Similarity=0.194  Sum_probs=93.8

Q ss_pred             CCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHH-HHHHHHHHHhccCCCCcceeceeEE
Q psy9091          32 LDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDD-IKEEYRMLRDLSQHSNIPDFFGAYM  108 (176)
Q Consensus        32 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~-~~~e~~~~~~l~~h~niv~~~~~~~  108 (176)
                      ...+....+.|++.+.||+|+||.||++.+.. ++..+|+|.+....  ..... +..+..++..+ +|+||+++++.+.
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~   94 (318)
T 2dyl_A           17 GQRYQAEINDLENLGEMGSGTCGQVWKMRFRK-TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFI   94 (318)
T ss_dssp             SSEEECCGGGEEEEEEC------CEEEEEETT-TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEE
T ss_pred             chhhhhhhccccccceeeecCCeeEEEEEEec-CCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEe
Confidence            33445556789999999999999999999987 78899999997642  22233 34444466666 9999999999998


Q ss_pred             eccCCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhc-CCCccccccCCCCCcc
Q psy9091         109 KKHQTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGS-GVCADVYEALDTQNVT  174 (176)
Q Consensus       109 ~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~-~i~~~v~~~~~~~nv~  174 (176)
                      .    .+.++++|||+ ++.+..+..  .........  ...+...+|.|+|.. |+   +|+||+|+||.
T Consensus        95 ~----~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i---~H~dlkp~Nil  157 (318)
T 2dyl_A           95 T----NTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV---IHRDVKPSNIL  157 (318)
T ss_dssp             C----SSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCGGGEE
T ss_pred             c----CCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCE---EeCCCCHHHEE
Confidence            8    78999999999 445544443  233443332  223677789999985 88   99999999984

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.72  E-value=1.6e-17  Score=130.86  Aligned_cols=128  Identities=17%  Similarity=0.187  Sum_probs=93.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcc
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHS  115 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~  115 (176)
                      ...+|.+.+.||+|+||.||++.+.. .+ .+|+|.+.....   ...+|+.+++.+ +|+||+++++.+....  ....
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~-~~aikk~~~~~~---~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~  111 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVE-SD-EVAIKKVLQDKR---FKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEV  111 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETT-TE-EEEEEEEECCTT---SCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECC-CC-eEEEEEEecCcc---hHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCce
Confidence            34579999999999999999999876 44 488887755432   123689999999 9999999999996632  1133


Q ss_pred             eEEEEEecCCCCChhhhcC----CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK----PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~----~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||++++.+.....    .........  ...+.+.+|+|+|..|+   +|+||||+||.
T Consensus       112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~Nil  173 (394)
T 4e7w_A          112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI---CHRDIKPQNLL  173 (394)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cCCCCCHHHEE
Confidence            4889999998653332221    233333322  23377889999999998   99999999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.72  E-value=7.6e-18  Score=132.97  Aligned_cols=126  Identities=18%  Similarity=0.270  Sum_probs=92.3

Q ss_pred             CCeEE-eeEEeecCCeeEEEEEec--CCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYEL-GYVIGSGVCADVYEALDT--QNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~-~~~lg~G~~g~v~~~~~~--~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.|.+ .+.||+|+||.||+|.+.  . .+..+|+|.+.... ....+.+|+.+++.+ +|+||+++++.+....  ...
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~--~~~   94 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGK-DDKDYALKQIEGTG-ISMSACREIALLREL-KHPNVISLQKVFLSHA--DRK   94 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSS-CCCCEEEEECSSSS-CCHHHHHHHHHHHHC-CCTTBCCCCEEEEETT--TTE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCC-CCeEEEEEEECCCC-CCHHHHHHHHHHHhc-CCCCeeeEeeEEecCC--CCe
Confidence            45776 458999999999999965  3 46789999987543 224578899999999 9999999999996521  678


Q ss_pred             EEEEEecCCCCChhhhcCC----------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP----------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~----------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +++||||++ |+|.+++..          ........  ...+++.+|+|||..|+   +|+||||+||.
T Consensus        95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i---vH~Dlkp~NIl  160 (405)
T 3rgf_A           95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV---LHRDLKPANIL  160 (405)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCE---eCCCcCHHHeE
Confidence            999999997 578877741          01333222  23377888999999998   99999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=5.6e-17  Score=132.63  Aligned_cols=116  Identities=16%  Similarity=0.037  Sum_probs=85.2

Q ss_pred             EEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          43 ELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        43 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ...+.||+|+||.||++..   .+..+++|......         ...+.+.+|+.+++.+ +|+||+.+...+..    
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~----  410 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY---LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVD----  410 (540)
T ss_dssp             ---------CCEEEEEEEC---SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEE----
T ss_pred             CCCCEEeeCCCEEEEEEEE---CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEe----
Confidence            3457999999999999955   45678888754321         1234589999999999 99999966666656    


Q ss_pred             cceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....|+||||+++|+|.+++..   .  .....+...+|+|+|..++   +||||||+||.
T Consensus       411 ~~~~~lVmE~~~ggsL~~~l~~---~--~~i~~qi~~aL~~LH~~gI---iHrDiKp~NIL  463 (540)
T 3en9_A          411 LDNKRIMMSYINGKLAKDVIED---N--LDIAYKIGEIVGKLHKNDV---IHNDLTTSNFI  463 (540)
T ss_dssp             TTTTEEEEECCCSEEHHHHSTT---C--THHHHHHHHHHHHHHHTTE---ECTTCCTTSEE
T ss_pred             CCccEEEEECCCCCCHHHHHHH---H--HHHHHHHHHHHHHHHHCcC---ccCCCCHHHEE
Confidence            5667999999999999999955   1  1234588889999999998   99999999984

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.71  E-value=3.5e-18  Score=142.18  Aligned_cols=130  Identities=15%  Similarity=0.141  Sum_probs=102.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~  115 (176)
                      ++|.+.+.||+|+||.||++.+.. .+..+|+|.+...  ......+.+|+.++..+ +||||+++++.+....  ....
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~-tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQD-TGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTT-TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCC
Confidence            579999999999999999999887 7889999998753  34566789999999999 9999999988864311  1156


Q ss_pred             eEEEEEecCCCCChhhhcCCC----CCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKPD----ELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..++||||+++|+|.+++...    .......  ...+.+.+|+|+|..|+   +|+||+|+||.
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gI---VHrDLKP~NIL  153 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI---IHRDLKPENIV  153 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTB---CCCCCCSTTEE
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCCHHHeE
Confidence            689999999999999998621    2332222  23377788999999998   99999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.62  E-value=2.1e-15  Score=112.44  Aligned_cols=126  Identities=16%  Similarity=0.064  Sum_probs=86.8

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeE--EEEEEeecChh-------------------------hHHHHHHHHHH
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKK--VSIKVQKINPE-------------------------FIDDIKEEYRM   90 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~--~aik~i~~~~~-------------------------~~~~~~~e~~~   90 (176)
                      ....|.+...||+|+||.||+|.+.. .+..  +|+|.++....                         ....+..|+.+
T Consensus        45 ~~~~~~i~~~ig~G~~g~Vy~a~~~~-~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  123 (258)
T 1zth_A           45 KGYITAMGGVISTGKEANVFYADGVF-DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRN  123 (258)
T ss_dssp             TTSEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHH
T ss_pred             CCCchhhCCEEeecceEEEEEEEEcC-CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHH
Confidence            34458899999999999999999855 6778  99998754310                         11367889999


Q ss_pred             HHhccCCCCcceeceeEEeccCCcceEEEEEecCCC-C----ChhhhcCCCCCChhhHhhhhhHHHHHHHH-hcCCCccc
Q psy9091          91 LRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAE-M----PPPRALKPDELDLDNLQDCGDRYELGYVI-GSGVCADV  164 (176)
Q Consensus        91 ~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~l~~lh-~~~i~~~v  164 (176)
                      +..+ .|+++... ..+..     ...++||||+++ |    +|.++..............+...+|.++| ..|+   |
T Consensus       124 l~~l-~~~~i~~p-~~~~~-----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~gi---v  193 (258)
T 1zth_A          124 LERA-KEAGVSVP-QPYTY-----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAEL---V  193 (258)
T ss_dssp             HHHH-HHTTCCCC-CEEEE-----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCE---E
T ss_pred             HHHH-HhCCCCCC-eEEEc-----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCE---E
Confidence            9998 77764222 22222     346899999953 4    55555422111121223447778899999 9998   9


Q ss_pred             cccCCCCCcc
Q psy9091         165 YEALDTQNVT  174 (176)
Q Consensus       165 ~~~~~~~nv~  174 (176)
                      |+|+||+||.
T Consensus       194 HrDlkp~NIL  203 (258)
T 1zth_A          194 HADLSEYNIM  203 (258)
T ss_dssp             CSSCSTTSEE
T ss_pred             eCCCCHHHEE
Confidence            9999999984

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.52  E-value=2e-14  Score=112.67  Aligned_cols=124  Identities=15%  Similarity=0.160  Sum_probs=83.7

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---------------hhHH--------HHHHHHHHHH
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---------------EFID--------DIKEEYRMLR   92 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---------------~~~~--------~~~~e~~~~~   92 (176)
                      ......|.+..+||+|+||.||.|.+.  .|..+|+|+++...               ....        +...|...+.
T Consensus        91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~  168 (397)
T 4gyi_A           91 AARKDVYSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK  168 (397)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCEEEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence            344456999999999999999999985  47899999875310               0011        2234556666


Q ss_pred             hccCCCCcceeceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCC
Q psy9091          93 DLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQN  172 (176)
Q Consensus        93 ~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~n  172 (176)
                      .+ .+.++.. ...+..     ...+|||||++|++|.++...   +.......++..+|.++|..|+   ||+||||.|
T Consensus       169 rL-~~~gv~v-p~p~~~-----~~~~LVME~i~G~~L~~l~~~---~~~~~l~~qll~~l~~lH~~gI---VHrDLKp~N  235 (397)
T 4gyi_A          169 AL-YEEGFPV-PEPIAQ-----SRHTIVMSLVDALPMRQVSSV---PDPASLYADLIALILRLAKHGL---IHGDFNEFN  235 (397)
T ss_dssp             HH-HHTTCSC-CCEEEE-----ETTEEEEECCSCEEGGGCCCC---SCHHHHHHHHHHHHHHHHHTTE---ECSCCSTTS
T ss_pred             HH-HhcCCCC-Ceeeec-----cCceEEEEecCCccHhhhccc---HHHHHHHHHHHHHHHHHHHCCC---cCCCCCHHH
Confidence            65 3333322 222222     223799999999988776531   2222334577888999999988   999999999


Q ss_pred             cc
Q psy9091         173 VT  174 (176)
Q Consensus       173 v~  174 (176)
                      |.
T Consensus       236 IL  237 (397)
T 4gyi_A          236 IL  237 (397)
T ss_dssp             EE
T ss_pred             EE
Confidence            84

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.52  E-value=1.8e-14  Score=114.18  Aligned_cols=132  Identities=18%  Similarity=0.109  Sum_probs=87.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCC-CCccee--------
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQH-SNIPDF--------  103 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h-~niv~~--------  103 (176)
                      .....|...+.||+|+||.||+|.+.. ++..||+|.+....    .....+.+|+.++..+ .| .|....        
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~  152 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQE-TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIF  152 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCC
T ss_pred             CCceeEEEecccccCCCEEEEEEEecC-CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhccccc
Confidence            344458899999999999999999987 88999999987431    2356688899988887 55 221111        


Q ss_pred             -cee------------EEecc-CCcceEEEEEecCCCCChhhhcC------CCC--CChhhH-hh-hhhHHHHHHHHhcC
Q psy9091         104 -FGA------------YMKKH-QTHSEIWFVMQREAEMPPPRALK------PDE--LDLDNL-QD-CGDRYELGYVIGSG  159 (176)
Q Consensus       104 -~~~------------~~~~~-~~~~~~~lv~e~~~~g~L~~~l~------~~~--~~~~~~-~~-~~~~~~l~~lh~~~  159 (176)
                       ...            +.... ......+++|+++ +++|.++++      ...  ...... .. .+.+.+|+|+|..+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  231 (413)
T 3dzo_A          153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  231 (413)
T ss_dssp             CCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             111            11100 0023467777765 589998884      111  111111 12 37777899999999


Q ss_pred             CCccccccCCCCCcc
Q psy9091         160 VCADVYEALDTQNVT  174 (176)
Q Consensus       160 i~~~v~~~~~~~nv~  174 (176)
                      +   |||||||+||.
T Consensus       232 i---iHrDiKp~NIL  243 (413)
T 3dzo_A          232 L---VHTYLRPVDIV  243 (413)
T ss_dssp             E---ECSCCCGGGEE
T ss_pred             c---ccCCcccceEE
Confidence            8   99999999984

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.83  E-value=2.1e-08  Score=74.12  Aligned_cols=108  Identities=13%  Similarity=0.021  Sum_probs=78.0

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      .|.+...++.|+.+.||++..   .+..+++|..+... .....+.+|..++..+..+..+.++++.+..    .+..|+
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~---~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----~~~~~l   87 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----DGWSNL   87 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC---SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE----TTEEEE
T ss_pred             cceeEeeccCCCCCeEEEEEC---CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec----CCceEE
Confidence            478888888888999999875   35789999987521 1223578899999988556778888888877    678999


Q ss_pred             EEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHh
Q psy9091         120 VMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIG  157 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~  157 (176)
                      +|||++|.+|.+.+. ...+. .....+....++.+|.
T Consensus        88 v~e~i~G~~l~~~~~-~~~~~-~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-DEQSP-EKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEECCSSEEHHHHCC-TTTCH-HHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeehhhccC-CcccH-HHHHHHHHHHHHHHhC
Confidence            999999999887642 11121 1112245556888888

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.37  E-value=1.9e-06  Score=63.06  Aligned_cols=83  Identities=11%  Similarity=0.115  Sum_probs=56.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCC-CcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS-NIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~-niv~~~~~~~~~~~~~~~~~  118 (176)
                      ..+.+....+.|..+.||++...  .+..+++|.....  ....+..|..++..+..+. .+.++++....    .+..+
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~--~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----~~~~~   91 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQ--GRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTE----AGRDW   91 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECT--TSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC----SSCEE
T ss_pred             CCCceEecccCCCCceEEEEecC--CCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccC----CCCCE
Confidence            34555444346666999998653  3567999987654  1234677888888874442 25567777666    56789


Q ss_pred             EEEecCCCCChh
Q psy9091         119 FVMQREAEMPPP  130 (176)
Q Consensus       119 lv~e~~~~g~L~  130 (176)
                      ++|||++|.++.
T Consensus        92 ~v~e~i~G~~l~  103 (264)
T 1nd4_A           92 LLLGEVPGQDLL  103 (264)
T ss_dssp             EEEECCSSEETT
T ss_pred             EEEEecCCcccC
Confidence            999999998874

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.25  E-value=4.7e-06  Score=64.32  Aligned_cols=111  Identities=7%  Similarity=0.071  Sum_probs=66.1

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEee--cCh--hhHHHHHHHHHHHHhccC-CCCcceeceeEEeccCCcceEE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQK--INP--EFIDDIKEEYRMLRDLSQ-HSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~--~~~--~~~~~~~~e~~~~~~l~~-h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ..+.++.|.++.+|.....   +..+++|..+  ...  .....+.+|..++..+.. +..+++++..+.... ..+..|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~---~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~-~~g~~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP---GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES-VIGRAF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS---SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-TTSSCE
T ss_pred             eEEEcCCcccceEEEEEEC---CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-ccCCeE
Confidence            4678899999999998763   4578888776  332  123467889999998832 345677777765510 013478


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHh-hhhhHHHHHHHHhc
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQ-DCGDRYELGYVIGS  158 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~l~~lh~~  158 (176)
                      +||||++|..+.+............. ..+....|+.+|..
T Consensus       118 ~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~  158 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTV  158 (359)
T ss_dssp             EEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998887543212211111111 12444558888874

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.72  E-value=0.018  Score=42.02  Aligned_cols=80  Identities=14%  Similarity=0.174  Sum_probs=57.1

Q ss_pred             EEeecCCe-eEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEecCC
Q psy9091          47 VIGSGVCA-DVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQREA  125 (176)
Q Consensus        47 ~lg~G~~g-~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~~~  125 (176)
                      .+..|..+ .||+..... .+..+.+|.-+...  ...+..|..+++.+..+-.|.+++..+..    .+..|++||+++
T Consensus        31 ~~~~G~S~~~v~rl~~~~-~~~~~~lk~~~~~~--~~~~~~E~~~l~~l~~~vPVP~v~~~~~~----~~~~~lvme~l~  103 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKP-NAPELFLKHGKGSV--ANDVTDEMVRLNWLTAFMPLPTIKHFIRT----PDDAWLLTTAIP  103 (272)
T ss_dssp             EEECSSSSCEEEEEECCT-TCCCEEEEEEETHH--HHHHHHHHHHHHHHTTTSCCCCEEEEEEE----TTEEEEEEECCC
T ss_pred             EccCCCcCCeEEEEEecC-CCeEEEEEECCCCC--HhHHHHHHHHHHHhccCCCcCeEEEEEEE----CCeEEEEEEeeC
Confidence            34455555 588877665 55678889766432  34577888888887555457777888777    678999999999


Q ss_pred             CCChhhhc
Q psy9091         126 EMPPPRAL  133 (176)
Q Consensus       126 ~g~L~~~l  133 (176)
                      |.++.+..
T Consensus       104 G~~~~~~~  111 (272)
T 4gkh_A          104 GKTAFQVL  111 (272)
T ss_dssp             SEEHHHHH
T ss_pred             Cccccccc
Confidence            88876654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.61  E-value=0.037  Score=41.89  Aligned_cols=97  Identities=11%  Similarity=0.075  Sum_probs=67.3

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC--CCcceeceeEEeccCCcceEEEEE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKHQTHSEIWFVM  121 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~~~~~~~~lv~  121 (176)
                      -.+.++.|....+|+...   .+..+.+|..+..  ....+..|...++.+...  ..+++.+.....    .+..+++|
T Consensus        40 ~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~----~g~~~lvm  110 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND---EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNS----QGHSFLLL  110 (312)
T ss_dssp             EEEEECCSSSSEEEEEES---SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC----SSEEEEEE
T ss_pred             eeEEeCCccceeeeEEEE---CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec----CCceEEEE
Confidence            457789999999999875   3467888876643  245678888888776332  456777777665    57799999


Q ss_pred             ecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         122 QREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       122 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      ||+++..+..        .   ...+....|+.+|....
T Consensus       111 e~l~G~~~~~--------~---~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          111 EALNKSKNKQ--------S---SFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             ECCCCCCCCT--------T---HHHHHHHHHHHHHHCCC
T ss_pred             EeccCCCCCc--------h---hHHHHHHHHHHHHcCCC
Confidence            9999875421        1   12244456899998754

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.08  E-value=0.022  Score=42.57  Aligned_cols=79  Identities=16%  Similarity=0.148  Sum_probs=48.4

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCC--cceeceeEEeccCCcceEEEEEe
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN--IPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n--iv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      .+.++.|....+|...      ..+++|..+. ......+.+|..++..+..+..  +...+...... ......|+||+
T Consensus        25 i~~~~~G~~n~v~~v~------~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~-~~~~~~~~vm~   96 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN------RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS-ETYQMSFAGFT   96 (304)
T ss_dssp             CCEEEECSSEEEEEST------TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-SSCSCSCEEEE
T ss_pred             eEecCCCCcceEEEEC------CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-CCCCcceEEEc
Confidence            3458899999888752      3477887543 2345668889999887733333  23333332220 00123588999


Q ss_pred             cCCCCChhh
Q psy9091         123 REAEMPPPR  131 (176)
Q Consensus       123 ~~~~g~L~~  131 (176)
                      +++|.++.+
T Consensus        97 ~i~G~~l~~  105 (304)
T 3sg8_A           97 KIKGVPLTP  105 (304)
T ss_dssp             CCCCEECCH
T ss_pred             ccCCeECCc
Confidence            999987764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.78  E-value=0.15  Score=37.62  Aligned_cols=101  Identities=13%  Similarity=-0.016  Sum_probs=61.8

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ...-++.+|.|..+.||+.....  |+.+.+|..+... .....+..|...++.+.....+. ....+..     +.-++
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~D--G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vp-vP~v~~~-----~~~~l   87 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELAD--GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSP-VPQVAGW-----DDRTL   87 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETT--SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCC-SCCEEEE-----ETTEE
T ss_pred             CeEEEEecCCCCCeEEEEEEECC--CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCC-cceEEec-----cCceE
Confidence            45667899999999999998753  6789999865432 22345778999888873322222 2222222     12378


Q ss_pred             EEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         120 VMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      +|||++++....-         .  .....-.++.+|....
T Consensus        88 v~e~l~~~~~~~~---------~--~~~lg~~La~lH~~~~  117 (288)
T 3f7w_A           88 AMEWVDERPPTPE---------A--AERFGHQLAAMHLAGA  117 (288)
T ss_dssp             EEECCCCCCCCHH---------H--HHHHHHHHHHHHHTCC
T ss_pred             EEEeecccCCChH---------H--HHHHHHHHHhhhhccc
Confidence            9999986543211         0  1123345788886654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.91  E-value=0.06  Score=41.73  Aligned_cols=76  Identities=21%  Similarity=0.237  Sum_probs=47.2

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh--------hHHHHHHHHHHHHhccCC-C-CcceeceeEEeccCCc
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE--------FIDDIKEEYRMLRDLSQH-S-NIPDFFGAYMKKHQTH  114 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~--------~~~~~~~e~~~~~~l~~h-~-niv~~~~~~~~~~~~~  114 (176)
                      .+.+|.|.++.||++.... .+..+++|.......        ....+..|..++..+... + .+..++..  +    .
T Consensus        35 ~~~lg~G~~n~vyrv~~~~-~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d----~  107 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQE-HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--D----T  107 (397)
T ss_dssp             EEECCSSSSEEEEEEEC-----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--E----T
T ss_pred             EEECCCCceEEEEEEEECC-CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--c----C
Confidence            5688999999999997654 457899997654211        123457788888776332 2 33344432  3    3


Q ss_pred             ceEEEEEecCCCC
Q psy9091         115 SEIWFVMQREAEM  127 (176)
Q Consensus       115 ~~~~lv~e~~~~g  127 (176)
                      ...++|||++++.
T Consensus       108 ~~~~lvmE~l~g~  120 (397)
T 2olc_A          108 EMAVTVMEDLSHL  120 (397)
T ss_dssp             TTTEEEECCCTTS
T ss_pred             CccEEEEEeCCCc
Confidence            4458999999864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.86  E-value=0.49  Score=35.31  Aligned_cols=106  Identities=10%  Similarity=-0.033  Sum_probs=61.7

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCC--CcceeceeEEeccCCcceEEEEEe
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS--NIPDFFGAYMKKHQTHSEIWFVMQ  122 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~--niv~~~~~~~~~~~~~~~~~lv~e  122 (176)
                      .+.++.|....+|..   .   ..+++|.. ........+..|..++..+..+.  .+...+......   .+..+++||
T Consensus        24 v~~l~~G~~n~v~~v---g---~~~VlR~~-~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~---~g~~~~v~e   93 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---N---GDWVFRFP-KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS---DGNPFVGYR   93 (306)
T ss_dssp             EEEEEECSSEEEEEE---T---TTEEEEEE-SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT---TSCEEEEEE
T ss_pred             eeecCCCcceeEEEE---C---CEEEEEec-CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC---CCceEEEEe
Confidence            345788888888877   2   34677774 33334567889999999983332  244544444321   445789999


Q ss_pred             cCCCCChhhhcCCCCCChhhH-hhhhhHHHHHHHHhcCC
Q psy9091         123 REAEMPPPRALKPDELDLDNL-QDCGDRYELGYVIGSGV  160 (176)
Q Consensus       123 ~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~l~~lh~~~i  160 (176)
                      +++|..+.+............ ...+....|+.+|....
T Consensus        94 ~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A           94 KVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             CCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             ccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999888765321211111111 11133445777776543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=88.64  E-value=5.9  Score=29.28  Aligned_cols=75  Identities=16%  Similarity=0.046  Sum_probs=40.6

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccC-CCCcceece------eEEeccCCcceE
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ-HSNIPDFFG------AYMKKHQTHSEI  117 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~-h~niv~~~~------~~~~~~~~~~~~  117 (176)
                      .+.++.|..+.+|++...   +..+++|..+....   .+..|..++..+.. .-.++.++.      ....    .+..
T Consensus        37 ~~~l~gG~~n~~~~v~~~---~~~~vlk~~~~~~~---~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~----~~~~  106 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD---SGAVCLKRIHRPEK---KALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKH----GSFL  106 (346)
T ss_dssp             EEECC----CEEEEEEET---TEEEEEEEECSCHH---HHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEE----TTEE
T ss_pred             eeeccccccCcEEEEEeC---CCCEEEEecCCCHH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEE----CCEE
Confidence            345666778899998763   34588998876432   23334444443311 112333332      1123    4668


Q ss_pred             EEEEecCCCCCh
Q psy9091         118 WFVMQREAEMPP  129 (176)
Q Consensus       118 ~lv~e~~~~g~L  129 (176)
                      +++|+|++|..+
T Consensus       107 ~~l~~~i~G~~~  118 (346)
T 2q83_A          107 FVVYDWIEGRPF  118 (346)
T ss_dssp             EEEEECCCCBCC
T ss_pred             EEEEEeecCccC
Confidence            999999998655

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=87.68  E-value=0.56  Score=35.52  Aligned_cols=89  Identities=11%  Similarity=0.166  Sum_probs=53.8

Q ss_pred             eEEeeEE-eecCCeeEEEEEec--CC---CCeEEEEEEeecCh---h-hHHHHHHHHHHHHhccCC--CCcceeceeEEe
Q psy9091          42 YELGYVI-GSGVCADVYEALDT--QN---GNKKVSIKVQKINP---E-FIDDIKEEYRMLRDLSQH--SNIPDFFGAYMK  109 (176)
Q Consensus        42 ~~~~~~l-g~G~~g~v~~~~~~--~~---~~~~~aik~i~~~~---~-~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~  109 (176)
                      ....+.| +.|..+.+|.....  .+   .+..+++|..+...   . ....+..|..++..+..+  -.+.+++.....
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3445677 78888899987653  00   04578888765432   0 113467788888776433  245666665543


Q ss_pred             ccCCcceEEEEEecCCCCChhh
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPR  131 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~  131 (176)
                      .. ..+..+++|||++|..+.+
T Consensus       102 ~~-~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          102 GD-VLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             ST-TTSSCEEEEECCCCBCCCB
T ss_pred             CC-ccCCceEEEEecCCCChhh
Confidence            10 0134688999999877654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=86.65  E-value=2.2  Score=33.06  Aligned_cols=103  Identities=13%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             eeEEeecCCeeEEEEEecC------CCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          45 GYVIGSGVCADVYEALDTQ------NGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~------~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .+.+.-|....+|++....      +.+..+.+|.............+|..+++.+..+.-..++++.+.      +  .
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~------~--g  126 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP------E--G  126 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET------T--E
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC------C--c
Confidence            3566677778889887631      013578888753322233455688888887744333345555442      2  2


Q ss_pred             EEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         119 FVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      +||||++|..|..-   ...+ + .........|+.+|...+
T Consensus       127 ~v~e~i~G~~l~~~---~l~~-p-~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          127 RLEQYIPSRPLKTQ---ELRE-P-VLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             EEEECCSEEECCGG---GGGC-H-HHHHHHHHHHHHHHTCCC
T ss_pred             cEEEEecCccCChh---HhCC-H-HHHHHHHHHHHHHhCCCC
Confidence            89999997554311   1111 1 112244556899997654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=86.32  E-value=4.4  Score=32.21  Aligned_cols=104  Identities=11%  Similarity=-0.026  Sum_probs=58.2

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEEEec
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQR  123 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv~e~  123 (176)
                      -.+.|+.|....+|++.... .+..+.+|+........-.-.+|..++..+..+.-..++++.+.      +  .+||||
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~------~--G~v~e~  182 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMS-KQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT------N--GRIEEF  182 (458)
T ss_dssp             EEEEECC--CEEEEEEEETT-TTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET------T--EEEEEC
T ss_pred             EEEEcCCCeEeEEEEEEECC-CCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC------C--eEEEEe
Confidence            35678888889999998743 34778888764421111112578888888743333345555542      2  249999


Q ss_pred             CCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCC
Q psy9091         124 EAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVC  161 (176)
Q Consensus       124 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~  161 (176)
                      ++|..|..   ....+.  .....+...|+.+|.....
T Consensus       183 I~G~~l~~---~~l~~~--~~~~~ia~~La~LH~~~~~  215 (458)
T 2qg7_A          183 MDGYALSR---EDIKNP--KFQKLIAKNLKLLHDIKLN  215 (458)
T ss_dssp             CCSEECCT---TTTTSH--HHHHHHHHHHHHHHTCCCC
T ss_pred             eCCccCCh---hhcCCH--HHHHHHHHHHHHHhcCCcc
Confidence            99754421   111111  1123455569999976654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=85.81  E-value=8.3  Score=28.46  Aligned_cols=77  Identities=13%  Similarity=0.082  Sum_probs=45.6

Q ss_pred             eEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-CCcceecee-----EEeccCCcceEEE
Q psy9091          46 YVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-SNIPDFFGA-----YMKKHQTHSEIWF  119 (176)
Q Consensus        46 ~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-~niv~~~~~-----~~~~~~~~~~~~l  119 (176)
                      ..++ |....+|......  +..+++|..+........+..|..++..+..+ -.++.++..     ...    .+..++
T Consensus        32 ~~l~-g~~n~~y~v~~~~--g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~----~g~~~~  104 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDED--RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH----QGFYFA  104 (328)
T ss_dssp             EEEC-CSSSEEEEECCTT--CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEE----TTEEEE
T ss_pred             Eeec-CcccceEEEEcCC--CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEE----CCEEEE
Confidence            3455 7778899876532  45789999874322234556677777665322 123333332     112    356788


Q ss_pred             EEecCCCCCh
Q psy9091         120 VMQREAEMPP  129 (176)
Q Consensus       120 v~e~~~~g~L  129 (176)
                      +|++++|..+
T Consensus       105 l~~~i~G~~~  114 (328)
T 1zyl_A          105 VFPSVGGRQF  114 (328)
T ss_dssp             EEECCCCEEC
T ss_pred             EEEecCCCCC
Confidence            9999987543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=81.04  E-value=7.1  Score=30.55  Aligned_cols=103  Identities=13%  Similarity=-0.003  Sum_probs=58.3

Q ss_pred             EeeEEeecCCeeEEEEEecCC------CCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          44 LGYVIGSGVCADVYEALDTQN------GNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~------~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..+.++.|....+|++.....      .+..+.+|+..... ....+..|..++..+..+.-.+++++.+.      +  
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~li~E~~~l~~L~~~g~~P~l~~~~~------~--  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFS------G--  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEET------T--
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-cHHHHHHHHHHHHHHHhCCCCCcEEEEeC------C--
Confidence            456788888899999986420      13578888874311 11345578888887743333355555442      2  


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      .+|+||++|-++..-   ...+.  .....+...|+.+|...+
T Consensus       148 g~v~e~l~G~~l~~~---~l~~~--~~~~~ia~~La~LH~~~~  185 (429)
T 1nw1_A          148 GRLEEYIPSRPLSCH---EISLA--HMSTKIAKRVAKVHQLEV  185 (429)
T ss_dssp             EEEECCCCEEECCTT---GGGSH--HHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEEeCCcccChh---hcCCH--HHHHHHHHHHHHHhCCcc
Confidence            289999986444211   00111  112244455888887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	176
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.002

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.1 bits (145), Expect = 6e-12
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI----NPEFIDDIKEEYRMLRDL 94
            DRYELG ++G G  ++V+ A D +   + V++KV +     +P F    + E +    L
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLH-RDVAVKVLRADLARDPSFYLRFRREAQNAAAL 64

Query: 95  SQHSNIPDFFGAYMKKHQTHSEIWFVM 121
             H  I   +     +       + VM
Sbjct: 65  -NHPAIVAVYDTGEAETPAGPLPYIVM 90

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 59.1 bits (142), Expect = 2e-11
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
           D Y+L   +G G  ++V+EA++  N  +KV +K+  + P     IK E ++L +L    N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNN-EKVVVKI--LKPVKKKKIKREIKILENLRGGPN 91

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           I         K         V +
Sbjct: 92  IITLADIV--KDPVSRTPALVFE 112

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 3e-10
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 37  DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKI--NPEFIDDIKEEYRMLRDL 94
           D G RY     IG G    V  A D  N   +V+IK      +  +      E ++L   
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNK-VRVAIKKISPFEHQTYCQRTLREIKILLRF 63

Query: 95  SQHSNIPDFFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNL 143
            +H NI               +  +++         + LK   L  D++
Sbjct: 64  -RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI 111

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 6e-10
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 13/102 (12%)

Query: 28  DELDLDNLQ------DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV-QKINPEF 80
           DE  L+ L+      D   +Y     IG G    VY A+D   G ++V+I+         
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPK 60

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            + I  E  ++R+  ++ NI ++  +Y        E+W VM+
Sbjct: 61  KELIINEILVMREN-KNPNIVNYLDSY----LVGDELWVVME 97

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.3 bits (130), Expect = 7e-10
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD----IKEEYRML 91
           +D  D Y+   V+G+G  ++V  A D +   K V+IK   I  + ++     ++ E  +L
Sbjct: 5   EDIRDIYDFRDVLGTGAFSEVILAEDKRTQ-KLVAIKC--IAKKALEGKEGSMENEIAVL 61

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
             + +H NI      Y    ++   ++ +MQ
Sbjct: 62  HKI-KHPNIVALDDIY----ESGGHLYLIMQ 87

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 8e-10
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
           ++Y +   +G G    V+  ++T +  K    K  K+       +K+E  +L    +H N
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSK-KTYMAKFVKVKGTDQVLVKKEISILNIA-RHRN 62

Query: 100 IPDFFGAYMKKHQTHSEIWFVM 121
           I     ++    ++  E+  + 
Sbjct: 63  ILHLHESF----ESMEELVMIF 80

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 1e-09
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV------QKINPEFIDDIKEEYRMLRD 93
           +  E G V+GSG    V  A         VSI+V      +K +    + +  E +M+  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           L  H NI +  GA          I+ + +
Sbjct: 97  LGSHENIVNLLGAC----TLSGPIYLIFE 121

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 13/94 (13%)

Query: 36  QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV-------QKINPEFIDDIKEEY 88
           ++  D Y+ G  +GSG  A V +  +   G  + + K                +DI+ E 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTG-LQYAAKFIKKRRTKSSRRGVSREDIEREV 64

Query: 89  RMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            +L+++ QH N+      Y    +  +++  +++
Sbjct: 65  SILKEI-QHPNVITLHEVY----ENKTDVILILE 93

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 19  MPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK-VQKIN 77
            P P  +K D +         D Y++   +G+G    V+   +   G    + K V   +
Sbjct: 13  YPQPVEIKHDHVL--------DHYDIHEELGTGAFGVVHRVTERATG-NNFAAKFVMTPH 63

Query: 78  PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
               + +++E + +  L +H  + +   A+    +  +E+  + 
Sbjct: 64  ESDKETVRKEIQTMSVL-RHPTLVNLHDAF----EDDNEMVMIY 102

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 40  DRYE-LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           D Y+    V+G G+   V +  + +   +K ++K+ +  P+     + E  +    SQ  
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQ-EKFALKMLQDCPKA----RREVELHWRASQCP 65

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
           +I      Y   +     +  VM
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVM 88

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQH 97
           D +E    +G+G    V++     +G   ++ K+   +I P   + I  E ++L +    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHEC-NS 63

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVM 121
             I  F+GA+     +  EI   M
Sbjct: 64  PYIVGFYGAF----YSDGEISICM 83

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 11/85 (12%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD---IKEEYRMLRDLSQ 96
           D Y++   +GSG    V+  ++   G +    K   IN  +  D   +K E  ++  L  
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATG-RVFVAKF--INTPYPLDKYTVKNEISIMNQL-H 84

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H  + +   A+    +   E+  ++
Sbjct: 85  HPKLINLHDAF----EDKYEMVLIL 105

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 4e-09
 Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 10/86 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           + ++ G ++G G  + V  A +     ++ +IK+      I    +  +  E  ++  L 
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATS-REYAIKILEKRHIIKENKVPYVTRERDVMSRL- 65

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
            H      +  +    Q   +++F +
Sbjct: 66  DHPFFVKLYFTF----QDDEKLYFGL 87

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 4e-09
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
           +  +L   +G+G   +V+      NG+ KV++K  K      D    E  +++ L QH  
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQR 69

Query: 100 IPDFFGAYMKKHQTHSEIWFVM 121
           +   +        T   I+ + 
Sbjct: 70  LVRLYAVV-----TQEPIYIIT 86

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 4e-09
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 10/89 (11%)

Query: 40  DRYELGYVIGSGVCADVYEA----LDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRD 93
           +R   G  +G+G    V EA    L   +    V++K+     +    + +  E ++L  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           L  H NI +  GA             + +
Sbjct: 83  LGNHMNIVNLLGAC----TIGGPTLVITE 107

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 5e-09
 Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 13/103 (12%)

Query: 20  PPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE 79
           P  + L  D  ++       +   L   +G G   +V+      NG  +V+IK  K    
Sbjct: 2   PQTQGLAKDAWEIPR-----ESLRLEVKLGQGCFGEVWMGTW--NGTTRVAIKTLKPGTM 54

Query: 80  FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
             +   +E ++++ L +H  +   +        +   I+ V +
Sbjct: 55  SPEAFLQEAQVMKKL-RHEKLVQLYAVV-----SEEPIYIVTE 91

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 5e-09
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLS- 95
            +YE    IG G    V++A D +NG + V++K    Q            E  +LR L  
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 96  -QHSNIPDFFGAYM-KKHQTHSEIWFVMQ 122
            +H N+   F      +    +++  V +
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFE 95

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 6e-09
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           + YE+ Y IG+G      +     +G K +  K      +       +  E  +LR+L +
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDG-KILVWKELDYGSMTEAEKQMLVSEVNLLREL-K 61

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           H NI  ++   +   +T++ ++ VM+
Sbjct: 62  HPNIVRYYDRII--DRTNTTLYIVME 85

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.5 bits (123), Expect = 7e-09
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 27  PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFID 82
           PD  +L    D    +     IG G    VY A D +N  + V+IK      K + E   
Sbjct: 2   PDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNS-EVVAIKKMSYSGKQSNEKWQ 60

Query: 83  DIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           DI +E R L+ L +H N   + G Y+++H      W VM
Sbjct: 61  DIIKEVRFLQKL-RHPNTIQYRGCYLREH----TAWLVM 94

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (122), Expect = 7e-09
 Identities = 15/99 (15%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 22  PRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFI 81
           P +   D+ +++          + + +G G   +VYE +  +     V++K  K +   +
Sbjct: 4   PSSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEV 57

Query: 82  DDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV 120
           ++  +E  +++++ +H N+    G   ++   +    F+
Sbjct: 58  EEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFM 95

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 8e-09
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV-QKINPEFIDDIKEEYRMLRDLSQHS 98
           D +E+   +G G    VY+A + +      + KV    + E ++D   E  +L     H 
Sbjct: 12  DFWEIIGELGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASC-DHP 69

Query: 99  NIPDFFGAYMKKHQTHSEIWFVMQ 122
           NI     A+       + +W +++
Sbjct: 70  NIVKLLDAF----YYENNLWILIE 89

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G+RY LG  IGSG   D+Y   D   G ++V+IK++ +  +    +  E ++ + +    
Sbjct: 6   GNRYRLGRKIGSGSFGDIYLGTDIAAG-EEVAIKLECVKTKH-PQLHIESKIYKMMQGGV 63

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
            IP        +   +  +  ++
Sbjct: 64  GIP-TIRWCGAEGDYNVMVMELL 85

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 1e-08
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLS 95
           +R ELG  IG G   DV++ +     N  +++ ++           +   +E   +R   
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 65

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            H +I    G       T + +W +M+
Sbjct: 66  DHPHIVKLIGVI-----TENPVWIIME 87

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
           G  Y++G  IG G    ++E  +  N  ++V+IK +    +    +++EYR  + L+  +
Sbjct: 4   GVHYKVGRRIGEGSFGVIFEGTNLLNN-QQVAIKFEPRRSD-APQLRDEYRTYKLLAGCT 61

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
            IP+ +       Q       V+
Sbjct: 62  GIPNVYYFG----QEGLHNVLVI 80

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 5/88 (5%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
             Y     +GSG    V  A+D + G  KV+IK       +  F      E R+L+ + +
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTG-AKVAIKKLYRPFQSELFAKRAYRELRLLKHM-R 75

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQRE 124
           H N+      +           F +   
Sbjct: 76  HENVIGLLDVFTPDETLDDFTDFYLVMP 103

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLS 95
           G   +    IG G    VY+ LDT+    +V+      +K+        KEE  ML+ L 
Sbjct: 8   GRFLKFDIEIGRGSFKTVYKGLDTETT-VEVAWCELQDRKLTKSERQRFKEEAEMLKGL- 65

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           QH NI  F+ ++    +    I  V 
Sbjct: 66  QHPNIVRFYDSWESTVKGKKCIVLVT 91

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 3e-08
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV--QKINPEFIDDIKEEYRMLRDLSQH 97
           + ++L   +G G   +V  A++     + V++K+   K   +  ++IK+E  + + L  H
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTE-EAVAVKIVDMKRAVDCPENIKKEICINKML-NH 62

Query: 98  SNIPDFFGAYMKKHQTHSEIWFVMQ 122
            N+  F+G   + +      +  ++
Sbjct: 63  ENVVKFYGHRREGN----IQYLFLE 83

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 3e-08
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLS 95
            +RY+    +GSG    V  A DT+ G  +V++K       +         E R+L+ + 
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM- 74

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVMQRE 124
           +H N+      +             +   
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTH 103

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 6e-08
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 39  GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHS 98
                L   IG G   +V+         ++V++K+     E     + E      L +H 
Sbjct: 2   ARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSREERSWFREAEIYQTVML-RHE 57

Query: 99  NIPDFFGAYMKKHQTHSEIWFVM 121
           NI  F  A  K + T +++W V 
Sbjct: 58  NILGFIAADNKDNGTWTQLWLVS 80

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 7e-08
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
           + +E+G  +G G   +VY A + Q+      KV  K Q         ++ E  +   L +
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-R 64

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           H NI   +G +       + ++ +++
Sbjct: 65  HPNILRLYGYF----HDATRVYLILE 86

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.5 bits (115), Expect = 7e-08
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----------QKINPEFIDDIKEEYR 89
           + YE   ++G GV + V   +      K+ ++K+           +   E  +   +E  
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTC-KEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 61

Query: 90  MLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +LR +S H NI      Y    +T++  + V 
Sbjct: 62  ILRKVSGHPNIIQLKDTY----ETNTFFFLVF 89

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 8e-08
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK-KVSIKV--QKINPEFIDDIKEEYRMLRDLSQ 96
           +  +   VIG G    V +A   ++G +   +IK   +  + +   D   E  +L  L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFV 120
           H NI +  GA   +   +  I + 
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYA 93

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 1e-07
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
            +YE    IG G    V++A + +   + V++K       +         E  +L++L +
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETH-EIVALKRVRLDDDDEGVPSSALREICLLKEL-K 59

Query: 97  HSNIPDFFGAYMKKHQTH 114
           H NI           +  
Sbjct: 60  HKNIVRLHDVLHSDKKLT 77

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 9/86 (10%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK----INPEFIDDIKEEYRMLRDLS 95
           + + L  ++G G    V+ A   +   +  +IK  K    +  + ++    E R+L    
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTN-QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +H  +   F  +    QT   ++FVM
Sbjct: 61  EHPFLTHMFCTF----QTKENLFFVM 82

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 7/83 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
                   IGSG    V+          KV+IK  +      +D  EE  ++  L  H  
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPK 61

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           +   +G         + I  V +
Sbjct: 62  LVQLYGVC----LEQAPICLVFE 80

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
            +  +G  IGSG    VY+     +   K+ + V    P+ +   K E  +LR   +H N
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKM-LNVTAPTPQQLQAFKNEVGVLRKT-RHVN 65

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           I  F G     + T  ++  V Q
Sbjct: 66  ILLFMG-----YSTAPQLAIVTQ 83

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
            +YE    IG G   +V++A   + G +KV++K    +     F      E ++L+ L +
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTG-QKVALKKVLMENEKEGFPITALREIKILQLL-K 67

Query: 97  HSNIPDFFGAYMKKHQTHSE----IWFVM 121
           H N+ +       K   ++     I+ V 
Sbjct: 68  HENVVNLIEICRTKASPYNRCKGSIYLVF 96

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
              +L   IG G   DV           KV++K  K N         E  ++  L +HSN
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIK-NDATAQAFLAEASVMTQL-RHSN 61

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           +    G  +   +    ++ V +
Sbjct: 62  LVQLLGVIV---EEKGGLYIVTE 81

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK----INPEFIDDIKEEYRMLRDLS 95
             +++   +G+G    V+      NG +  ++KV K    +  + ++   +E  ML  + 
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNG-RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV- 61

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVM 121
            H  I   +G +    Q    + ++ 
Sbjct: 62  THPFIIRMWGTFQDAQQIFMIMDYIE 87

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 3e-07
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
             Y    VIG+G    VY+A    +G + V+IK    +  F +    E +++R L  H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSG-ELVAIKKVLQDKRFKN---RELQIMRKL-DHCN 74

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQRE 124
           I      +    +   E++  +  +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLD 99

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
                   +G+G    V        G   V+IK+ K      D+  EE +++ +L  H  
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEK 60

Query: 100 IPDFFGAYMKKHQTHSEIWFVMQ 122
           +   +G           I+ + +
Sbjct: 61  LVQLYGVC----TKQRPIFIITE 79

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.0 bits (108), Expect = 5e-07
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           ++Y     IG G    VY+A +  N  +  ++K    +K +         E  +L++L +
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-K 58

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           HSNI   +     K +       + Q
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQ 84

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 5e-07
 Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 12/88 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN------PEFIDDIKEEYRMLRD 93
               L   +G G    V          K VS+ V+ +       PE +DD   E   +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           L  H N+   +G  +        +  V 
Sbjct: 68  L-DHRNLIRLYGVVLTPP-----MKMVT 89

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 5e-07
 Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 12/90 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNG------NKKVSIKV--QKINPEFIDDIKEEYRML 91
           DR  LG  +G G    V  A              KV++K+       + + D+  E  M+
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           + + +H NI +  GA          ++ ++
Sbjct: 73  KMIGKHKNIINLLGAC----TQDGPLYVIV 98

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 6e-07
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 9/87 (10%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFID----DIKEEYRMLRDLS 95
              ++  VIG+G   +V        G +++ + ++ +   + +    D   E  ++    
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF- 84

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
            H N+    G         + +  + +
Sbjct: 85  DHPNVIHLEGVV----TKSTPVMIITE 107

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.8 bits (107), Expect = 6e-07
 Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 33  DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLR 92
           +  +D   RY L   +G G  + V+ A D  N    V++K+ + +  + +  ++E ++L+
Sbjct: 8   EPYKD--ARYILVRKLGWGHFSTVWLAKDMVNN-THVAMKIVRGDKVYTEAAEDEIKLLQ 64

Query: 93  DLSQHSNI 100
            ++   N 
Sbjct: 65  RVNDADNT 72

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 8e-07
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
           + ++    IG G    VY+A +   G + V++K                 E  +L++L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTG-EVVALKKIRLDTETEGVPSTAIREISLLKEL-N 59

Query: 97  HSNIPDFFGAYMKKHQTHSEIWFVM 121
           H NI            T ++++ V 
Sbjct: 60  HPNIVKLLDV----IHTENKLYLVF 80

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.5 bits (107), Expect = 8e-07
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 11/88 (12%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           + + +  +IG G   +VY       G K  ++K     +    +       E  ML  +S
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTG-KMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 96  Q--HSNIPDFFGAYMKKHQTHSEIWFVM 121
                 I     A+     T  ++ F++
Sbjct: 63  TGDCPFIVCMSYAF----HTPDKLSFIL 86

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 9e-07
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQ 96
            RY+    IGSG    V  A D     + V+IK       N         E  +++ +  
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-N 74

Query: 97  HSNIPDFFGAYM--KKHQTHSEIWFVMQ 122
           H NI      +   K  +   +++ VM+
Sbjct: 75  HKNIISLLNVFTPQKTLEEFQDVYLVME 102

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           D+++    +G+G    V      ++G    ++K+    + +  + I+    E R+L+ + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESG-NHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98

Query: 96  QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
               +     ++      +  + +V  
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAG 125

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 13/83 (15%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKE---------EYRM 90
            +Y++G ++GSG    VY  +   +    V+IK   +  + I D  E         E  +
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDN-LPVAIKH--VEKDRISDWGELPNGTRVPMEVVL 60

Query: 91  LRDLS-QHSNIPDFFGAYMKKHQ 112
           L+ +S   S +      + +   
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDS 83

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNG--NKKVSIKVQKI-----NPEFIDDIKEEYRMLR 92
           + +EL  V+G+G    V+           K  ++KV K        +  +  + E ++L 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 93  DLSQHSNIPDFFGAYMKKHQTH 114
            + Q   +     A+  + + H
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLH 105

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 4e-06
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 47  VIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPD 102
           VIG G    VY      N  KK+   V+ +N       +     E  +++D   H N+  
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLS 92

Query: 103 FFGAYMKKHQTHSEIWFVMQ 122
             G  +   ++      V+ 
Sbjct: 93  LLGICL---RSEGSPLVVLP 109

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 8e-06
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKV--QKINPEFIDDIKEEYRMLRD 93
           DR +LG  +G G    V EA           + V++K+  +         +  E ++L  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 94  LSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
           +  H N+ +  GA  K       I    +
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCK 101

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKV----QKINPEFIDDIKEEYRMLRDLS 95
           + ++   ++G G    V    +   G +  ++K+      I  + +     E R+L++  
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVLQNT- 62

Query: 96  QHSNIPDFFGAYMKK--------HQTHSEIWFVMQREAEMPPPRA 132
           +H  +     A+           +    E++F + RE      RA
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA 107

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 40  DRYELGYVIGSGVCADVYEA-LDTQNGNKKVSIKVQKINPEFID----DIKEEYRMLRDL 94
                  VIG+G   +VY+  L T +G K+V + ++ +   + +    D   E  ++   
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 95  SQHSNIPDFFGAYMKKHQTHSEIWFVM 121
             H NI    G        +  +  + 
Sbjct: 67  -SHHNIIRLEGVIS----KYKPMMIIT 88

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 40  DRYELGYVIGSGVCADVYEALDTQNGNK---KVSIKV--QKINPEFIDDIKEEYRMLRDL 94
             ++   V+GSG    VY+ L    G K    V+IK   +  +P+   +I +E  ++  +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 95  SQHSNIPDFFGAYMKKH 111
             + ++    G  +   
Sbjct: 69  -DNPHVCRLLGICLTST 84

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 6e-05
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 31  DLDNLQDCGDRYELGYVIGSGVCADVYEA----LDTQNGNKKVSIKV--QKINPEFIDDI 84
            L +L+   +  E    IG G    V++A    L        V++K+  ++ + +   D 
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 85  KEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           + E  ++ +   + NI    G           +  + 
Sbjct: 64  QREAALMAEF-DNPNIVKLLGV----CAVGKPMCLLF 95

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 12/81 (14%)

Query: 47  VIGSGVCADVYEALDTQNGNKKVSIKV------QKINPEFIDDIKEEYRMLRDLSQHSNI 100
            +G G  A VY+A D     + V+IK        +           E ++L++L  H NI
Sbjct: 5   FLGEGQFATVYKARDKNTN-QIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62

Query: 101 PDFFGAYMKKHQTHSEIWFVM 121
                A        S I  V 
Sbjct: 63  IGLLDA----FGHKSNISLVF 79

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 16/101 (15%)

Query: 27  PDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNG----NKKVSIKV--QKINPEF 80
           PDE ++       ++  +   +G G    VYE +           +V+IK   +  +   
Sbjct: 12  PDEWEVAR-----EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 66

Query: 81  IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
             +   E  ++++     ++    G              +M
Sbjct: 67  RIEFLNEASVMKEF-NCHHVVRLLGVV----SQGQPTLVIM 102

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 10/79 (12%)

Query: 47  VIGSGVCADVYEALDTQNG-NKKVSIKV---QKINPEFIDDIKEEYRMLRDLSQHSNIPD 102
            +GSG    V +         K V++K+   +  +P   D++  E  +++ L  +  I  
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVR 72

Query: 103 FFGAYMKKHQTHSEIWFVM 121
             G              VM
Sbjct: 73  MIGICE-----AESWMLVM 86

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 20/100 (20%)

Query: 25  LKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKK-VSIKV--QKINPEFI 81
           LK D L + +++           +G G    V + +      +  V+IKV  Q       
Sbjct: 5   LKRDNLLIADIE-----------LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT 53

Query: 82  DDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFVM 121
           +++  E +++  L  +  I    G           +  VM
Sbjct: 54  EEMMREAQIMHQL-DNPYIVRLIGVC-----QAEALMLVM 87

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 12/91 (13%)

Query: 42  YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRM----------L 91
             +G ++G G  + V+     +    +  +K  K+       +KE+              
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEK--FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIR 59

Query: 92  RDLSQHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
              ++   +    G  + K         +M+
Sbjct: 60  SARNEFRALQKLQGLAVPKVYAWEGNAVLME 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	176
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.93
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.92
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.91
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.91
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.91
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.9
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.9
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.9
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.9
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.9
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.89
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.89
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.89
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.89
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.87
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.87
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.87
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.87
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.87
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.86
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.86
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.75
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.7
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.36
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	92.91
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	91.5

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-27  Score=180.78  Aligned_cols=129  Identities=15%  Similarity=0.167  Sum_probs=112.4

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +..++|.+++.||+|+||.||+|.+.. ++..+|+|.++........+.+|+.+++.+ +||||+++++.+.+    .+.
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~-~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~----~~~   75 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFES----MEE   75 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEE----TTE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEcCCcccHHHHHHHHHHHHhC-CCCCCCeEEEEEEE----CCE
Confidence            356789999999999999999999988 889999999988765566788999999999 99999999999999    899


Q ss_pred             EEEEEecCCCCChhhhcCCC--CCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKPD--ELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||++||+|.++|...  ..+.....  ..+.+.+|+|+|..|+   +||||||+||.
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~i---iHrDlKp~NIl  134 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI---GHFDIRPENII  134 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC---Cccccccccee
Confidence            99999999999999999732  34544432  3378889999999998   99999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-27  Score=178.20  Aligned_cols=127  Identities=15%  Similarity=0.228  Sum_probs=107.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      -++|++++.||+|+||.||+|.+.. ++..+|+|.++...  .....+.+|+.+++.+ +||||+++++.+.+    .+.
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~----~~~   77 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRRE----GNI   77 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECC-------CHHHHHHHHHTC-CCTTBCCEEEEEEE----TTE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-CCCCEeeEeeeecc----Cce
Confidence            3569999999999999999999988 88999999997653  2345689999999999 99999999999999    899


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.++|. ....+....  ...+.+.+|+|+|.+|+   |||||||+||.
T Consensus        78 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~I---iHrDiKp~NIL  135 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI---THRDIKPENLL  135 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             eEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC---ccCcccHHHEE
Confidence            999999999999999997 344555443  23388889999999998   99999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.7e-28  Score=181.66  Aligned_cols=130  Identities=20%  Similarity=0.319  Sum_probs=111.8

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++..+|++.+.||+|+||.||+|.+.. ++..||+|.+.... ...+.+.+|+.+++.+ +||||+++++.+..    .
T Consensus        16 ~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~----~   89 (293)
T d1yhwa1          16 GDPKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLV----G   89 (293)
T ss_dssp             SCTTTTBCSCEECCCSSSCEEEEEEBTT-TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEE----T
T ss_pred             CCcccccEEEEEEecCcCcEEEEEEECC-CCCEEEEEEEecccChHHHHHHHHHHHHHhC-CCCCEeeEeEEEEE----C
Confidence            3455679999999999999999999988 88999999987643 2456789999999999 99999999999999    7


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||++||+|.+++.....+.....  ..+++.+|+|+|.+|+   |||||||+||.
T Consensus        90 ~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~i---iHrDiKp~NIL  148 (293)
T d1yhwa1          90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNIL  148 (293)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCC---cccCCcHHHeE
Confidence            899999999999999999875555554433  3388889999999998   99999999984

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=9.4e-28  Score=180.42  Aligned_cols=135  Identities=14%  Similarity=0.216  Sum_probs=114.8

Q ss_pred             cCCCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        31 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      .++.|....+.|++.+.||+|+||.||+|.+.. ++..||+|.++......+.+.+|+.+++.+ +||||+++++.+.. 
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~-   84 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR-   84 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGG-GTEEEEEEECCTTCSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECC-CCeEEEEEEECCccchHHHHHHHHHHHHhC-CCCCEecCCccEee-
Confidence            445576667789999999999999999999987 788999999987655667899999999999 99999999999988 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC-C--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK-P--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~-~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+.++++|||+++|+|.+++. .  ...+.....  ..+++.+|+|+|.+++   |||||||+||.
T Consensus        85 ---~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~i---iHrDlKp~NIL  147 (287)
T d1opja_          85 ---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCL  147 (287)
T ss_dssp             ---SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ---CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCc---ccCccccCeEE
Confidence               788999999999999999985 2  233433322  2377889999999998   99999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-27  Score=179.17  Aligned_cols=130  Identities=18%  Similarity=0.266  Sum_probs=111.0

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++.+.|++++.||+|+||.||+|.+.. ++..+|+|.++... ...+.+.+|+.+++.+ +||||+++++.+.+    .
T Consensus         8 ~~p~d~Y~i~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~----~   81 (288)
T d2jfla1           8 LNPEDFWEIIGELGDGAFGKVYKAQNKE-TSVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYY----E   81 (288)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEE----T
T ss_pred             CCcccCeEEeEEEeeCCCcEEEEEEECC-CCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEee----C
Confidence            3455679999999999999999999988 88999999997643 3456788999999999 99999999999999    7


Q ss_pred             ceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||+++|+|.+++.  ....+....  ...+.+.+|.|+|.+|+   |||||||+||.
T Consensus        82 ~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~i---vHrDiKp~NIl  142 (288)
T d2jfla1          82 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI---IHRDLKAGNIL  142 (288)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---EEeecChhhee
Confidence            99999999999999999975  334454433  23388889999999998   99999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-27  Score=176.14  Aligned_cols=129  Identities=19%  Similarity=0.222  Sum_probs=110.8

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhccCCCCcceeceeEEe
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMK  109 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~  109 (176)
                      +..++|.+.+.||+|+||.||+|.+.. ++..+|+|.+....       ...+.+.+|+.+++.+ +||||+++++++.+
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~-~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   84 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN   84 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            345679999999999999999999987 88999999987531       2357799999999999 99999999999999


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          .+.+|+||||+++|+|.++|. ....+.....  ..+.+.+|+|+|..++   |||||||+||.
T Consensus        85 ----~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~i---vHrDiKp~Nil  145 (293)
T d1jksa_          85 ----KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI---AHFDLKPENIM  145 (293)
T ss_dssp             ----SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ----CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcce---eecccccceEE
Confidence                899999999999999999997 3445544433  3377889999999998   99999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.9e-27  Score=173.30  Aligned_cols=126  Identities=18%  Similarity=0.317  Sum_probs=108.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++.+.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+.+    .+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~----~~   79 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD----AT   79 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC----SS
T ss_pred             hHeEEEEEEecCCCcEEEEEEECC-CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEE----CC
Confidence            369999999999999999999988 88999999987532    2356788999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||+++|+|.+++. ....+.....  ..+.+.+|+|+|..|+   |||||||+||.
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~i---vHrDiKp~Nil  138 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHRDIKPENLL  138 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             EEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeeeeccccce
Confidence            9999999999999999997 3445544433  3388889999999998   99999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=4.2e-27  Score=178.38  Aligned_cols=130  Identities=20%  Similarity=0.236  Sum_probs=107.1

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+..+.|++.+.||+|+||.||+|.+.. ++..+|+|.+....  .....+.+|+.+++.+ +||||+++++.+.+    
T Consensus         5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----   78 (307)
T d1a06a_           5 EDIRDIYDFRDVLGTGAFSEVILAEDKR-TQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYES----   78 (307)
T ss_dssp             SCGGGTEEEEEESBSGGGGGEEEEEETT-TCCEEEEEEEEC----------CHHHHHHHTC-CCTTBCCEEEEEEC----
T ss_pred             CCCccceEEEEEEeeccCeEEEEEEECC-CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----
Confidence            3456779999999999999999999987 88999999998643  2345678999999999 99999999999998    


Q ss_pred             cceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+|+||||++||+|.++|. ....+....  ...+.+.+|+|+|..|+   |||||||+||.
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~i---iHrDiKp~Nil  139 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLL  139 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhcee---eeEEeccccee
Confidence            889999999999999999996 444554443  23388889999999999   99999999984

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=1.8e-26  Score=177.80  Aligned_cols=127  Identities=13%  Similarity=0.120  Sum_probs=109.3

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .+.|++++.||+|+||.||+|.+.. ++..||+|.++... .....+.+|+.+++.+ +||||+++++++..    .+.+
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~----~~~~  101 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFED----KYEM  101 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEEC----SSEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-CCCEEEEEEECCcchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----CCEE
Confidence            4579999999999999999999988 88999999998753 3456788999999999 99999999999998    8999


Q ss_pred             EEEEecCCCCChhhhcCC--CCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKP--DELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+||||++||+|.+++..  ..++.....  ..+++.+|+|+|.+|+   |||||||+||.
T Consensus       102 ~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i---iHRDiKp~NIL  159 (352)
T d1koba_         102 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI---VHLDIKPENIM  159 (352)
T ss_dssp             EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccccccccc
Confidence            999999999999998763  234444432  3388889999999998   99999999984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=1.8e-26  Score=177.67  Aligned_cols=126  Identities=13%  Similarity=0.169  Sum_probs=109.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ...+.+.+|+.+++.+ +||||+++++++..    .+.+|
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~-~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~----~~~~~   99 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFED----DNEMV   99 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEE----TTEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEcccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----CCEEE
Confidence            469999999999999999999988 89999999997653 3556789999999999 99999999999999    89999


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||++||+|.++|.  ....+......  .+++.+|+|+|.+|+   |||||||+||.
T Consensus       100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i---iHrDiKp~NIl  156 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLDLKPENIM  156 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eeeeechhHee
Confidence            9999999999999985  23445444333  388889999999999   99999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.94  E-value=3.4e-26  Score=171.05  Aligned_cols=129  Identities=18%  Similarity=0.205  Sum_probs=109.6

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----------hhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----------EFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----------~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      +.++|++.+.||+|+||.||+|.+.. ++..+|+|.++...          .....+.+|+.+++.+..||||+++++++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~-~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECC-CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec
Confidence            35689999999999999999999987 88999999987631          12346889999999995599999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+    .+.+|+||||+++|+|.++|+ ....+....+.  .+++.+|+|+|.+|+   |||||||+||-
T Consensus        80 ~~----~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~Nil  142 (277)
T d1phka_          80 ET----NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI---VHRDLKPENIL  142 (277)
T ss_dssp             EC----SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             cc----CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCC---cccccccceEE
Confidence            98    899999999999999999997 44455444333  388899999999998   99999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.7e-27  Score=177.41  Aligned_cols=127  Identities=18%  Similarity=0.268  Sum_probs=109.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .++|++++.||+|+||.||+|.+.. ++..+|+|.++..  ......+.+|+.+++.+ +||||+++++.|.+    .+.
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~~~   78 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS----DGE   78 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETT-TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEEC----SSE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE----CCE
Confidence            4679999999999999999999988 8899999999764  33456789999999999 99999999999998    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||++||+|.+++. .........  ...+.+.+|.|+|. +||   +||||||+||.
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~I---iHRDiKP~NIL  137 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI---MHRDVKPSNIL  137 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCC---CCSCCSGGGEE
T ss_pred             EEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCE---EccccCHHHee
Confidence            999999999999999997 344444433  33388889999996 588   99999999984

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=174.36  Aligned_cols=126  Identities=14%  Similarity=0.281  Sum_probs=108.9

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++.+.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+.+    .+
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~----~~   81 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELA-TSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD----DE   81 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEEC----SS
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEE----CC
Confidence            469999999999999999999988 88999999997532    2456789999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||++||+|.+++. ....+......  .+.+.+|+|+|..++   |||||||+||.
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i---iHrDiKp~NIl  140 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI---IHRDLKPENIL  140 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             EEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccE---EcCcCCccccc
Confidence            9999999999999999987 44555544333  377889999999998   99999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.4e-26  Score=175.63  Aligned_cols=129  Identities=23%  Similarity=0.312  Sum_probs=109.1

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ++...|+.++.||+|+||.||+|.+.. ++..||+|.+....    .....+.+|+.+++.+ +||||+++++++.+   
T Consensus        12 dp~~~y~~l~~lG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~---   86 (309)
T d1u5ra_          12 DPEKLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLR---   86 (309)
T ss_dssp             CHHHHEEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE---
T ss_pred             CcHHhcEeeEEEecCCCeEEEEEEECC-CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEE---
Confidence            345579999999999999999999988 88999999997642    2456789999999999 99999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+|+||||+++|+|..++. ....+....  ...+++.+|.|+|.+|+   |||||||+||.
T Consensus        87 -~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i---iHrDiKp~NIL  147 (309)
T d1u5ra_          87 -EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNIL  147 (309)
T ss_dssp             -TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCSGGGEE
T ss_pred             -CCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eccCCCcceEE
Confidence             789999999999999977665 444554443  23388889999999998   99999999984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.1e-26  Score=168.10  Aligned_cols=129  Identities=22%  Similarity=0.229  Sum_probs=106.5

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .|++.++||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +||||+++++.+.........+
T Consensus        10 y~~~~~~iG~G~fg~Vy~~~~~~-~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~~   87 (270)
T d1t4ha_          10 FLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCI   87 (270)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEE
T ss_pred             EEEeeeEEecCcCcEEEEEEECC-CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCCEE
Confidence            35777899999999999999988 8889999998753   33566789999999999 9999999999987643335679


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcC--CCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSG--VCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~--i~~~v~~~~~~~nv~  174 (176)
                      |+||||+++|+|.+++. ....+.....  ..+.+.+|+|+|.++  +   |||||||+||.
T Consensus        88 ~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~I---iHrDiKp~NIL  146 (270)
T d1t4ha_          88 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPI---IHRDLKCDNIF  146 (270)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCC---CCSCCCGGGEE
T ss_pred             EEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCE---EeCCcChhhce
Confidence            99999999999999997 3344444432  338888999999988  7   99999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.3e-26  Score=174.75  Aligned_cols=126  Identities=16%  Similarity=0.239  Sum_probs=109.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|.+++.||+|+||.||+|.+.. ++..+|+|.++...    .....+.+|+.+++.+ +||||+++++.+.+    .+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~----~~   78 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQT----HD   78 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEEC----SS
T ss_pred             HhcEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeecc----cc
Confidence            469999999999999999999988 89999999998642    2456789999999999 99999999999999    89


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+|+||||++||+|.+++. ....+....+  ..+.+.+|+|+|++|+   |||||||+||.
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~i---iHRDlKP~NIL  137 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV---VYRDIKLENLM  137 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             ccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCc---cccccCHHHeE
Confidence            9999999999999999987 3444444333  3388889999999999   99999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=8.8e-26  Score=168.64  Aligned_cols=131  Identities=19%  Similarity=0.281  Sum_probs=109.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .++|++.+.||+|+||.||+|.+.. ++..||+|.++..    ......+.+|+.+++.+ +||||+++++.+.......
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLR-LHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSSS
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECC-CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCCC
Confidence            4679999999999999999999988 8999999999753    23456789999999998 9999999999998743323


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||++||+|.+++. ....+....  ...+.+.+|+|+|..|+   |||||||+||.
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---iHrDiKP~NIl  143 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIM  143 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCccccCcccc
Confidence            45899999999999999886 334444433  23388889999999998   99999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-26  Score=169.80  Aligned_cols=131  Identities=16%  Similarity=0.231  Sum_probs=108.1

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +.|..+.+.|++.+.||+|+||.||+|.+..  +..||+|.++........+.+|+.++..+ +||||+++++.+..   
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~---   79 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG--HTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ---   79 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS---
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEECC--CCEEEEEEEccCcCCHHHHHHHHHHHHhC-CCCCEeEEEeeecc---
Confidence            3455667789999999999999999999853  67899999987655567799999999999 99999999998754   


Q ss_pred             CcceEEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                        +.+++||||+++|+|.+++..   ...+....  ...++..+|.|+|..++   +||||||+||.
T Consensus        80 --~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~i---vHrDiKp~NIl  141 (272)
T d1qpca_          80 --EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANIL  141 (272)
T ss_dssp             --SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             --CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCccchhhee
Confidence              567999999999999998762   12443332  23377888999999988   99999999984

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.2e-26  Score=168.02  Aligned_cols=131  Identities=18%  Similarity=0.206  Sum_probs=100.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.|++++.||+|+||.||+|.+.. ++..||+|.+...   ....+.+.+|+.+++.+ +||||+++++.+.+..  .+.
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~--~~~   79 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRT--NTT   79 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC------C
T ss_pred             hhCEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCC--CCE
Confidence            569999999999999999999988 8899999998764   33566789999999999 9999999999986421  466


Q ss_pred             EEEEEecCCCCChhhhcC-----CCCCChhhHh--hhhhHHHHHHHHhcCC--CccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-----PDELDLDNLQ--DCGDRYELGYVIGSGV--CADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~--~~~~~~~l~~lh~~~i--~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.+++.     ....+.....  ..+.+.+|+|+|..+.  ..+|||||||+||.
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIl  146 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF  146 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEE
T ss_pred             EEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcC
Confidence            899999999999999985     2334443332  3377889999999872  23499999999984

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-25  Score=166.76  Aligned_cols=125  Identities=18%  Similarity=0.194  Sum_probs=106.3

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      +.|++.+.||+|+||.||+|.+..  +..||+|.++......+.+.+|+.+++.+ +||||+++++++..    .+.+++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~i~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~----~~~~~l   77 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLE----QAPICL   77 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT--TEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS----SSSCEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC--CCEEEEEEECCCcCcHHHHHHHHHHHHhc-CCCCcccccceecc----CCceEE
Confidence            459999999999999999999864  57899999987655567899999999999 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.+++..  ........  ...++..+|+|+|..++   +||||||+||.
T Consensus        78 v~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i---iHrDlKp~Nil  133 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRDLAARNCL  133 (263)
T ss_dssp             EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCTTCSGGGEE
T ss_pred             EEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce---eecccchhhee
Confidence            9999999999999862  33333332  23377888999999998   99999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.1e-25  Score=171.10  Aligned_cols=125  Identities=16%  Similarity=0.250  Sum_probs=108.1

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      .|++++.||+|+||.||+|.+.. ++..||+|.++...    .....+.+|+.+++.+ +||||+++++++.+    .+.
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~----~~~   78 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRH-NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQD----AQQ   78 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEEC----SSE
T ss_pred             HeEEEEEEecCcCcEEEEEEECC-CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEee----CCe
Confidence            59999999999999999999988 88999999997532    2456789999999999 99999999999998    899


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||++||+|..++. .........  ...+++.+|+|+|.+|+   |||||||+||.
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---iHrDiKp~NIL  136 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI---IYRDLKPENIL  136 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             eeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcE---EccccCchhee
Confidence            999999999999999987 444444333  33388889999999998   99999999984

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-25  Score=167.05  Aligned_cols=127  Identities=20%  Similarity=0.290  Sum_probs=104.5

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH  111 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~  111 (176)
                      |..+.+.|.+.+.||+|+||.||+|.+.    ..+|+|.++..   ......+.+|+.++..+ +||||+++++++..  
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~--   75 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA--   75 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS----SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS--
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC----CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec--
Confidence            5556678999999999999999999763    25999998753   34567899999999999 99999999997644  


Q ss_pred             CCcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         +.+++||||+++|+|.++|.  ....+.....  ..+++.+|+|+|..++   |||||||+||.
T Consensus        76 ---~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i---vHrDlKp~NiL  136 (276)
T d1uwha_          76 ---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRDLKSNNIF  136 (276)
T ss_dssp             ---SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             ---cEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCE---eccccCHHHEE
Confidence               56899999999999999995  3344444332  2377889999999998   99999999984

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.5e-25  Score=167.52  Aligned_cols=126  Identities=20%  Similarity=0.295  Sum_probs=105.5

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHH-hccCCCCcceeceeEEeccCCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLR-DLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~-~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      +.|.+++.||+|+||.||+|.+.. ++..||+|.++...    .....+..|..++. .+ +||||+++++++.+    .
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~-t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~-~hp~Iv~~~~~~~~----~   75 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTHMFCTFQT----K   75 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-TCTTBCCEEEEEEC----S
T ss_pred             CCeEEeeEEecCCCcEEEEEEECC-CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC-CCCcEEEEEEEEcc----C
Confidence            469999999999999999999988 89999999997532    23455677777665 56 99999999999999    8


Q ss_pred             ceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||+++|+|.+++. ....+....  ...+++.+|+|+|.+++   +||||||+||.
T Consensus        76 ~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~i---iHrDikp~NiL  135 (320)
T d1xjda_          76 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI---VYRDLKLDNIL  135 (320)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCCCGGGEE
T ss_pred             CceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCccccee
Confidence            99999999999999999997 344444333  33388889999999998   99999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.7e-25  Score=166.43  Aligned_cols=127  Identities=17%  Similarity=0.173  Sum_probs=104.5

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .++|++.+.||+|+||.||+|.+.. ++   ..+|+|.+...  ......+.+|+.+++.+ +||||+++++++..    
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~----   98 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTK----   98 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS----
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeC-CCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCCccEEEEEee----
Confidence            3579999999999999999999865 44   35888987653  34566799999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.+++||||+++|+|.+++..  ...+....  ...++..+|+|+|..++   |||||||+||.
T Consensus        99 ~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i---iHrDlKp~NIL  160 (299)
T d1jpaa_          99 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY---VHRDLAARNIL  160 (299)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCC---ccCccccceEE
Confidence            7889999999999999998863  23444332  22377889999999998   99999999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-24  Score=163.60  Aligned_cols=127  Identities=19%  Similarity=0.247  Sum_probs=102.3

Q ss_pred             CCCeEEee-EEeecCCeeEEEEEecCC-CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          39 GDRYELGY-VIGSGVCADVYEALDTQN-GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        39 ~~~~~~~~-~lg~G~~g~v~~~~~~~~-~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      .+.|.+.+ +||+|+||.||+|.++.. .+..||+|.++..  ......+.+|+.++..+ +||||+++++++..     
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-----   80 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-----   80 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-----
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-----
Confidence            45688888 499999999999987541 3457999998764  34567899999999999 99999999998865     


Q ss_pred             ceEEEEEecCCCCChhhhcCC--CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKP--DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+|+||||+++|+|.+++..  ...+....  ...+++.+|+|+|.+++   |||||||+||.
T Consensus        81 ~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~i---iHrDlKp~Nil  141 (285)
T d1u59a_          81 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRDLAARNVL  141 (285)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCcCchhhee
Confidence            568999999999999999762  33444333  23378889999999998   99999999983

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.2e-25  Score=163.78  Aligned_cols=129  Identities=18%  Similarity=0.216  Sum_probs=107.2

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCc
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~  114 (176)
                      |....++|++.+.||+|+||.||+|.+..  +..||+|.+.......+.+.+|+.++..+ +|+||+++++.+..     
T Consensus        12 ~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~--~~~vAiK~l~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-----   83 (285)
T d1fmka3          12 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-----   83 (285)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-----
T ss_pred             eEcCHHHEEEeeEEeeCCCeEEEEEEECC--CCEEEEEEECcccCCHHHHHHHHHHHHhc-ccCCEeEEEEEEec-----
Confidence            44456789999999999999999999865  46799999987655557799999999999 99999999998854     


Q ss_pred             ceEEEEEecCCCCChhhhcC---CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALK---PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +.+++||||+++|+|..++.   ....+...+  ...++..+|+|+|..++   +|+||||+||.
T Consensus        84 ~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i---vH~DlKp~NIl  145 (285)
T d1fmka3          84 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANIL  145 (285)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe---ecccccceEEE
Confidence            56899999999999999886   233444333  23377889999999998   99999999984

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.1e-25  Score=163.51  Aligned_cols=125  Identities=18%  Similarity=0.193  Sum_probs=106.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      +.|++.++||+|+||.||+|.++  .+..||+|.++........+.+|+.++..+ +||||+++++++..    .+.+++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~----~~~~~i   76 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTK----QRPIFI   76 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET--TTEEEEEEEEESSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEECC----SSSEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC--CCCEEEEEEECcCcCCHHHHHHHHHHHHhc-CCCceeeEEEEEee----CCceEE
Confidence            45899999999999999999985  467899999987655567899999999999 99999999999988    788999


Q ss_pred             EEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.+++.  ......+.+.  ..+.+.+|+|+|..|+   +|+||||+||.
T Consensus        77 v~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~i---iH~dlk~~Nil  132 (258)
T d1k2pa_          77 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCL  132 (258)
T ss_dssp             EEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTB---CCSCCSGGGEE
T ss_pred             EEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCc---ccccccceeEE
Confidence            999999999999975  2334333332  2277889999999998   99999999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=9.2e-25  Score=168.12  Aligned_cols=126  Identities=14%  Similarity=0.217  Sum_probs=108.6

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      ++|++++.||+|+||.||+|.+.. ++..+|+|.+....    .....+.+|+.+++.+ +||||+++++.+..    ..
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~-~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~----~~  114 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKE-SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKD----NS  114 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SS
T ss_pred             cCeEEEEEeecCcCcEEEEEEECC-CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeeccccccc----cc
Confidence            479999999999999999999988 88999999987532    2456789999999999 99999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+.+|+|.+++. ....+....  ...+++.+|.|+|.+++   |||||||+||.
T Consensus       115 ~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i---iHRDIKP~NIL  173 (350)
T d1rdqe_         115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL---IYRDLKPENLL  173 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             ccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCcCCHHHcc
Confidence            9999999999999999986 344554443  23378889999999998   99999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.1e-25  Score=166.60  Aligned_cols=132  Identities=20%  Similarity=0.257  Sum_probs=104.6

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCC-----eEEEEEEeecCh--hhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGN-----KKVSIKVQKINP--EFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~~aik~i~~~~--~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      |..+.++|++.+.||+|+||.||+|.+.. .+     ..||+|.+....  .....+.+|+.++..+.+||||+++++.+
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYG-ISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEES-CSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcC-CCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            34556789999999999999999998764 33     368999886542  34557889999998876899999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCCC------------------------CCChhhH--hhhhhHHHHHHHHhcCCC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKPD------------------------ELDLDNL--QDCGDRYELGYVIGSGVC  161 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~--~~~~~~~~l~~lh~~~i~  161 (176)
                      ..    .+.+++||||+++|+|.++|+..                        .++....  ...++..+|+|||.++| 
T Consensus       111 ~~----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I-  185 (325)
T d1rjba_         111 TL----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-  185 (325)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE-
T ss_pred             ee----CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe-
Confidence            88    78899999999999999998622                        1222222  23377889999999998 


Q ss_pred             ccccccCCCCCcc
Q psy9091         162 ADVYEALDTQNVT  174 (176)
Q Consensus       162 ~~v~~~~~~~nv~  174 (176)
                        |||||||+||.
T Consensus       186 --iHRDlKp~Nil  196 (325)
T d1rjba_         186 --VHRDLAARNVL  196 (325)
T ss_dssp             --EETTCSGGGEE
T ss_pred             --eeccCchhccc
Confidence              99999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=163.79  Aligned_cols=125  Identities=17%  Similarity=0.247  Sum_probs=101.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++++.||+|+||.||+|.+.. ++..||+|.++...   .....+.+|+.+++.+ +||||+++++.+.+    .+.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~----~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHT----ENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEC-------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEE----TTE
T ss_pred             CCCEeccEEecCcCeEEEEEEECC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEEecccccc----ccc
Confidence            469999999999999999999988 88999999997542   2356789999999999 99999999999999    789


Q ss_pred             EEEEEecCCCCChhhhcC---CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK---PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+.++ +.+++.   ....+.....  ..+.+.+|+|+|..||   |||||||+||.
T Consensus        76 ~~iv~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~I---iHrDiKpeNIl  134 (298)
T d1gz8a_          76 LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLL  134 (298)
T ss_dssp             EEEEEECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             eeEEEeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCE---EccccCchhee
Confidence            99999999855 444442   2334444432  3378889999999998   99999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=1.2e-24  Score=168.26  Aligned_cols=126  Identities=14%  Similarity=0.114  Sum_probs=102.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh----hhHHHHHHH---HHHHHhccCCCCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP----EFIDDIKEE---YRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~----~~~~~~~~e---~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      +.|.+.+.||+|+||.||+|.+.. ++..||+|.+....    .....+.+|   +.+++.+ +||||+++++++..   
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~-t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~---   78 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHT---   78 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEEC---
T ss_pred             HhCeeeeEEecCCCeEEEEEEECC-CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEE---
Confidence            469999999999999999999988 88999999987532    122334444   5566666 89999999999998   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       .+.+|+||||++||+|.++|. .........  ...+++.+|.|+|..|+   |||||||+||.
T Consensus        79 -~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~i---iHrDlKP~NIL  139 (364)
T d1omwa3          79 -PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV---VYRDLKPANIL  139 (364)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             -CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCc---cceeeccceeE
Confidence             789999999999999999997 334443333  23378889999999999   99999999984

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-24  Score=165.92  Aligned_cols=127  Identities=14%  Similarity=0.182  Sum_probs=102.1

Q ss_pred             CCeEEee-EEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          40 DRYELGY-VIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        40 ~~~~~~~-~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      +.|.++. .||+|+||.||+|.+.. ++..||+|.++...    .+.+|+.++..+.+||||++++++|.+.......+|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~----~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECC-CCCEEEEEEECCcH----HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            4688875 59999999999999988 88999999997643    466788887655589999999999875322247799


Q ss_pred             EEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|||||+||+|.++|..   ...+....  ...+.+.+|+|+|..|+   +||||||+||.
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~i---iHRDiKp~NIl  143 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPENLL  143 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCC---ccccccccccc
Confidence            99999999999999963   22333333  23378889999999998   99999999984

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.91  E-value=2.4e-24  Score=164.24  Aligned_cols=127  Identities=21%  Similarity=0.258  Sum_probs=105.7

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      ..++|++++.||+|+||.||+|.+.. ++..||+|.++...  ...+.+|+.++..+.+||||+++++.+....  ...+
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~--~~~~  107 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINIT-NNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPV--SRTP  107 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTT--TCSE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCCcEEEEEEEecC--CCce
Confidence            34679999999999999999999988 88999999987643  3567899999999856999999999997521  4569


Q ss_pred             EEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ++||||+++|+|..+.+.  ......  ...+++.+|+|||.+||   |||||||+||.
T Consensus       108 ~~v~e~~~~~~L~~~~~~--l~e~~i~~i~~qil~aL~~LH~~gI---vHrDiKp~NIL  161 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGI---MHRDVKPHNVM  161 (328)
T ss_dssp             EEEEECCCSCBGGGTTTS--CCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             eEEEeecCCCcHHHHhcC--CCHHHHHHHHHHHHHHHHHHhhccc---ccccccccceE
Confidence            999999999999888643  333322  33388889999999998   99999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.3e-24  Score=159.48  Aligned_cols=124  Identities=21%  Similarity=0.247  Sum_probs=98.4

Q ss_pred             eEEe-eEEeecCCeeEEEEEecC-CCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          42 YELG-YVIGSGVCADVYEALDTQ-NGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        42 ~~~~-~~lg~G~~g~v~~~~~~~-~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      +.+. ++||+|+||.||+|.+.. +.+..||+|.++..   ......+.+|+.+++.+ +||||+++++++..     +.
T Consensus         8 ~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~-----~~   81 (277)
T d1xbba_           8 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-----ES   81 (277)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEES-----SS
T ss_pred             CeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-CCCCCceEEEEecc-----CC
Confidence            3443 479999999999998753 13468999998653   23456799999999999 99999999999865     55


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++||||+++|+|.+++. ....+.....  ..+++.+|+|+|..++   |||||||+||-
T Consensus        82 ~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i---iHrDlKp~Nil  139 (277)
T d1xbba_          82 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF---VHRDLAARNVL  139 (277)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             EEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCc---ccCCCcchhhc
Confidence            789999999999999997 4445544332  2378889999999998   99999999984

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.1e-24  Score=158.29  Aligned_cols=126  Identities=19%  Similarity=0.231  Sum_probs=107.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++++.||+|+||.||+|.+.. ++..||+|.++..   ......+.+|+.+++.+ +|+||+++++.+..    ...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~----~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHS----DKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEC----SSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECC-CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-CcCCEEeecccccc----ccc
Confidence            479999999999999999999988 8899999998754   23567889999999998 99999999999999    789


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++++++.++++..++. .........  ...+.+.+|+|+|.++|   |||||||+||-
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~I---vHrDiKP~NIl  133 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLKPQNLL  133 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGGEE
T ss_pred             eeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCE---eeecccCcccc
Confidence            999999999999988876 334443332  23377889999999998   99999999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.2e-24  Score=157.87  Aligned_cols=131  Identities=23%  Similarity=0.291  Sum_probs=105.5

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEec
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKK  110 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~  110 (176)
                      |..+.++|++.+.||+|+||.||+|.+..+  .+..+|+|.++..  ......+.+|+.+++.+ +||||+++++.+.. 
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~-   79 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVITE-   79 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS-
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-
Confidence            344567899999999999999999988641  2346888888653  33466799999999999 99999999999854 


Q ss_pred             cCCcceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                          +.+|+||||+++|+|.+++.  ....+.....  ..+++.+|.|+|..++   |||||||+||.
T Consensus        80 ----~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i---iHrDlKp~NIl  140 (273)
T d1mp8a_          80 ----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---VHRDIAARNVL  140 (273)
T ss_dssp             ----SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             ----CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCe---eccccchhhee
Confidence                67899999999999999876  3334443332  3377889999999999   99999999984

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.4e-24  Score=160.39  Aligned_cols=122  Identities=22%  Similarity=0.211  Sum_probs=98.8

Q ss_pred             EeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChh------hHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE------FIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~------~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~  117 (176)
                      .++.||+|+||.||+|.+.. ++..||+|.++....      ....+.+|+.+++.+ +||||+++++++..    .+.+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~----~~~~   75 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKN-TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGH----KSNI   75 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSS-CCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECC----TTCC
T ss_pred             cceEeccCcCeEEEEEEECC-CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeecc----CCce
Confidence            46789999999999999988 889999999875421      134688999999999 99999999999998    7889


Q ss_pred             EEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         118 WFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      |+||||++++.+..++. ....+....  ...+.+.+|+|+|.+|+   +||||||+||.
T Consensus        76 ~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i---iHrDiKp~NIl  132 (299)
T d1ua2a_          76 SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI---LHRDLKPNNLL  132 (299)
T ss_dssp             EEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             eehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccce---ecccCCcceEE
Confidence            99999999888877765 333333332  33388889999999999   99999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.5e-24  Score=162.33  Aligned_cols=133  Identities=21%  Similarity=0.235  Sum_probs=103.4

Q ss_pred             CCCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc-C
Q psy9091          36 QDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH-Q  112 (176)
Q Consensus        36 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~-~  112 (176)
                      -+.+++|.+++.||+|+||.||+|.+.. ++..+|+|.++..  ......+.+|+.+++.+ +|||++++++.+.... .
T Consensus         4 ~~i~~rY~~~~~LG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           4 FDVGPRYTNLSYIGEGAYGMVCSAYDNV-NKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             CCCCTTEEEEEECC---CCCEEEEEETT-TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTT
T ss_pred             cCcCCCeEEEEEEeeccCeEEEEEEECC-CCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeecccc
Confidence            3456789999999999999999999988 8899999999764  34566789999999999 9999999999987632 1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....++++ +++.+|+|.+++.....+....  ...+.+.+|+|+|.+|+   |||||||+||.
T Consensus        82 ~~~~~~l~-~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~i---iHRDIKp~NIL  141 (345)
T d1pmea_          82 QMKDVYLV-THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LHRDLKPSNLL  141 (345)
T ss_dssp             TCCCEEEE-EECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             ccceEEEE-EeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---cCCCCCcceEE
Confidence            12335555 5567899999997444554443  23388889999999998   99999999984

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-23  Score=155.53  Aligned_cols=126  Identities=20%  Similarity=0.217  Sum_probs=103.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC----eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN----KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      ++|+..+.||+|+||.||+|.+.. .+    ..||+|.+...  ......+.+|+.++..+ +||||+++++.+..    
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~-~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~----   80 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKT-SSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISK----   80 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS----
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeC-CCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEec----
Confidence            469999999999999999998865 33    47999998753  34556789999999999 99999999999988    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+.++++|||+.+|++.+++.  .........  ...++..+|+|+|..++   +||||||+||.
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i---iHrDlKp~NIL  142 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAARNIL  142 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc---ccCccccceEE
Confidence            788999999999999998876  233443332  22277788999999998   99999999984

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-23  Score=158.70  Aligned_cols=134  Identities=19%  Similarity=0.244  Sum_probs=108.7

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .|..+.+.|++.+.||+|+||.||+|.+..    ..+..+|+|.++..  ......+.+|+.++..+.+||||+++++.+
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            466667889999999999999999998632    14568999999764  335567899999999986799999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCCC-------------------CCChhhH--hhhhhHHHHHHHHhcCCCccccc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKPD-------------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-------------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      ..    ...++++|||+++|+|.++|+..                   ..+....  ...++..+|+|||..++   |||
T Consensus        97 ~~----~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~i---vHr  169 (311)
T d1t46a_          97 TI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHR  169 (311)
T ss_dssp             CS----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             ee----CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCe---eec
Confidence            88    78899999999999999998621                   1222222  23377888999999999   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      ||||+||.
T Consensus       170 DLKp~NIl  177 (311)
T d1t46a_         170 DLAARNIL  177 (311)
T ss_dssp             CCSGGGEE
T ss_pred             cccccccc
Confidence            99999984

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.90  E-value=1.4e-23  Score=157.19  Aligned_cols=125  Identities=18%  Similarity=0.218  Sum_probs=105.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ++|++++.||+|+||.||+|.+.  .+..||+|.+....   .....+.+|+.+++.+ +||||+++++.+..    .+.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~----~~~   74 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHT----KKR   74 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET--TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEEC----SSC
T ss_pred             CCceeccEEecCCCcEEEEEEeC--CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEeeeeeccc----CCc
Confidence            47999999999999999999985  47899999997642   2356789999999999 99999999999998    889


Q ss_pred             EEEEEecCCCCChhhhcC-CCCCChhhHhh--hhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALK-PDELDLDNLQD--CGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~--~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||++.++.+..+.+ ....+......  .+++.+|+|+|..+|   |||||||+||-
T Consensus        75 ~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~I---vHrDiKp~NIl  132 (286)
T d1ob3a_          75 LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKPQNLL  132 (286)
T ss_dssp             EEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             eeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcE---EecCCCCceee
Confidence            999999999887777766 44455544322  277889999999998   99999999984

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.9e-24  Score=161.92  Aligned_cols=131  Identities=21%  Similarity=0.315  Sum_probs=101.4

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--C
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--Q  112 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~  112 (176)
                      +.++|++++.||+|+||.||+|.+.. ++..+|+|.+...   ......+.+|+.+++.+ +|||+++++++|....  .
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~~   93 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLD   93 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETT-TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTT
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCcccc
Confidence            56789999999999999999999988 8899999999753   34566789999999999 9999999999997632  1


Q ss_pred             CcceEEEEEecCCCCChhhhcCCCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALKPDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ....+|+||||+ +++|..+++....+.....  ..+.+.+|+|+|.+||   |||||||+||.
T Consensus        94 ~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~I---iHrDiKp~NIL  153 (346)
T d1cm8a_          94 DFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI---IHRDLKPGNLA  153 (346)
T ss_dssp             TCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             ccceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCC---cccccCcchhh
Confidence            234689999999 5677777764445544432  3378889999999998   99999999985

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-23  Score=160.46  Aligned_cols=128  Identities=19%  Similarity=0.235  Sum_probs=101.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTH  114 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~  114 (176)
                      ++|++++.||+|+||+||+|.+.. ++..||+|.++..   ......+.+|+.+++.+ +||||++++++|....  ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~-t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETT-TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECC-CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecccccccC
Confidence            579999999999999999999988 8999999999864   33456789999999999 9999999999996532  125


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..+|+||||+.++.+..+.  ...+....  ...+++.+|+|+|+.|+   +|||+||+||-
T Consensus        95 ~~~~iv~Ey~~~~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~gi---iHrDlKP~Nil  151 (355)
T d2b1pa1          95 QDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIV  151 (355)
T ss_dssp             CEEEEEEECCSEEHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             ceeEEEEeccchHHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhccc---ccccCCccccc
Confidence            7899999999865554443  22333332  33388889999999999   99999999984

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2e-23  Score=157.39  Aligned_cols=132  Identities=20%  Similarity=0.299  Sum_probs=101.8

Q ss_pred             CCCCCCCeEEeeEEeecCCeeEEEEEecCCCC-------eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceece
Q psy9091          35 LQDCGDRYELGYVIGSGVCADVYEALDTQNGN-------KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFG  105 (176)
Q Consensus        35 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-------~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~  105 (176)
                      |..+.++|.+.+.||+|+||.||+|.+.. .+       ..||+|.++..  ......+.+|...+..+.+||||+++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~-~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~   86 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG   86 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEEC-C----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcC-CCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence            55667889999999999999999998754 32       47999998764  3455678889888888768999999999


Q ss_pred             eEEeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCccccc
Q psy9091         106 AYMKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYE  166 (176)
Q Consensus       106 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~  166 (176)
                      ++..    ...+++||||+++|+|.++|...                 ..+....  ...+...+|+|+|..++   |||
T Consensus        87 ~~~~----~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~i---vHr  159 (299)
T d1fgka_          87 ACTQ----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHR  159 (299)
T ss_dssp             EECS----SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             cccc----CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCE---Eee
Confidence            9988    78899999999999999999621                 1222222  22277888999999999   999


Q ss_pred             cCCCCCcc
Q psy9091         167 ALDTQNVT  174 (176)
Q Consensus       167 ~~~~~nv~  174 (176)
                      ||||+||-
T Consensus       160 DiKp~NiL  167 (299)
T d1fgka_         160 DLAARNVL  167 (299)
T ss_dssp             CCSGGGEE
T ss_pred             eeccccee
Confidence            99999984

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.4e-23  Score=157.05  Aligned_cols=133  Identities=17%  Similarity=0.199  Sum_probs=108.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .+..+.++|++.+.||+|+||.||+|.+..    ..+..||+|.+...  ......+.+|+.+++.+ +|+|++.+++.+
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~   85 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVC   85 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-CCCCcccceeee
Confidence            356677889999999999999999998742    03468999998764  33466799999999999 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCC-C------------------------CCChhhH--hhhhhHHHHHHHHhcCC
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKP-D------------------------ELDLDNL--QDCGDRYELGYVIGSGV  160 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~------------------------~~~~~~~--~~~~~~~~l~~lh~~~i  160 (176)
                      ..    ....+++|||+++|+|.++|.. .                        .+.....  ...++..+|+|+|..++
T Consensus        86 ~~----~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i  161 (301)
T d1lufa_          86 AV----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  161 (301)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cc----CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCe
Confidence            88    7889999999999999999851 1                        1222222  22377788999999999


Q ss_pred             CccccccCCCCCcc
Q psy9091         161 CADVYEALDTQNVT  174 (176)
Q Consensus       161 ~~~v~~~~~~~nv~  174 (176)
                         |||||||+||-
T Consensus       162 ---vHrDlKp~NIL  172 (301)
T d1lufa_         162 ---VHRDLATRNCL  172 (301)
T ss_dssp             ---CCSCCSGGGEE
T ss_pred             ---EeeEEcccceE
Confidence               99999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-23  Score=160.40  Aligned_cols=131  Identities=18%  Similarity=0.245  Sum_probs=106.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC-Cc
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ-TH  114 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~-~~  114 (176)
                      .++|++++.||+|+||.||+|.+.. ++..||+|.++..   ......+.+|+.+++.+ +|+|++++++++..... ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETT-TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTTT
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECC-CCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeecccccc
Confidence            4679999999999999999999988 8999999999764   23456788999999999 99999999999865220 12


Q ss_pred             ceEEEEEecCCCCChhhhcCCCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         115 SEIWFVMQREAEMPPPRALKPDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ...+++|+|+.+|+|.+++.....+....+..  +++.+|+|+|.+|+   +||||||+||.
T Consensus        95 ~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~gi---iHrDiKp~NIL  153 (348)
T d2gfsa1          95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA  153 (348)
T ss_dssp             CCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             CceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCC---cccccCCcccc
Confidence            23455677788999999997555655444333  78889999999999   99999999984

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.8e-23  Score=157.28  Aligned_cols=127  Identities=19%  Similarity=0.238  Sum_probs=102.7

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe--EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcc
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK--KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHS  115 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~  115 (176)
                      +.|++.++||+|+||.||+|.+.. ++.  .+|+|.+...  ....+.+.+|+.++..+.+||||+++++++..    .+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~----~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE-TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----TT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECC-CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec----CC
Confidence            569999999999999999999876 665  4778877643  23456799999999997579999999999998    78


Q ss_pred             eEEEEEecCCCCChhhhcCC-----------------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         116 EIWFVMQREAEMPPPRALKP-----------------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       116 ~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .+++||||+++|+|.++|..                 ..++....  ...++..+|.|+|..++   |||||||+||-
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~i---iHrDlkp~NIL  159 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNIL  159 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCc---cccccccceEE
Confidence            99999999999999999852                 22333222  23377889999999998   99999999984

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-23  Score=156.20  Aligned_cols=127  Identities=22%  Similarity=0.237  Sum_probs=101.7

Q ss_pred             CCCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcce
Q psy9091          37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSE  116 (176)
Q Consensus        37 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~  116 (176)
                      ...+.|++.+.||+|+||.||+|.+   .+..||+|.++... ..+.+.+|+.+++.+ +||||+++++++...   .+.
T Consensus         4 i~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~i~~~~-~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~---~~~   75 (262)
T d1byga_           4 LNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEE---KGG   75 (262)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC-----C
T ss_pred             cCHHHeEEeEEEecCCCeEEEEEEE---CCeEEEEEEECcHH-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEec---CCc
Confidence            3445799999999999999999998   45789999997543 346789999999999 999999999988542   456


Q ss_pred             EEEEEecCCCCChhhhcCC---CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         117 IWFVMQREAEMPPPRALKP---DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       117 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +|+||||+++|+|.++|..   ...+....  ...+++.+|.|+|..++   ||+||+|+||.
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i---vH~dlkp~Nil  135 (262)
T d1byga_          76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVL  135 (262)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce---eccccchHhhe
Confidence            8999999999999999862   12333322  23377889999999998   99999999984

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.1e-23  Score=154.90  Aligned_cols=125  Identities=18%  Similarity=0.223  Sum_probs=100.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCe----EEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNK----KVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      +.|++++.||+|+||.||+|.+.. ++.    .+|+|.+...  ......+.+|+.+++.+ +||||+++++++..    
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~----   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLT----   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC-----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-CCTTBCCEEEEEES----
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcC-CCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec----
Confidence            359999999999999999999876 553    5888887653  23567899999999999 99999999999876    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +..++++||+.+|+|.+++.  ....+....  ...+++.+|+|+|.+++   |||||||+||.
T Consensus        83 -~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i---iHrDlKp~NIl  143 (317)
T d1xkka_          83 -STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVL  143 (317)
T ss_dssp             -SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCCCGGGEE
T ss_pred             -CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCc---ccCcchhhcce
Confidence             55788999999999999886  334444332  23378889999999998   99999999984

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-23  Score=155.85  Aligned_cols=131  Identities=19%  Similarity=0.148  Sum_probs=99.4

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEE
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWF  119 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~l  119 (176)
                      ..|.+.+.||+|+||.||+|.+   ++..||+|.++...........|+..+..+ +||||+++++.+.........+|+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~---~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccchhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcceEEEE
Confidence            4689999999999999999987   568999999876543322233444445566 999999999999874333457999


Q ss_pred             EEecCCCCChhhhcCCCCCChhhH--hhhhhHHHHHHHHhcCC-----CccccccCCCCCcc
Q psy9091         120 VMQREAEMPPPRALKPDELDLDNL--QDCGDRYELGYVIGSGV-----CADVYEALDTQNVT  174 (176)
Q Consensus       120 v~e~~~~g~L~~~l~~~~~~~~~~--~~~~~~~~l~~lh~~~i-----~~~v~~~~~~~nv~  174 (176)
                      ||||+++|+|.++|+....+....  ...+...+|.|+|..++     .++|||||||+||.
T Consensus        79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NIL  140 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEE
T ss_pred             EEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceE
Confidence            999999999999998444444332  22277788999997532     45599999999984

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.7e-23  Score=155.80  Aligned_cols=136  Identities=18%  Similarity=0.222  Sum_probs=103.4

Q ss_pred             CCCCCCCCCeEEeeEEeecCCeeEEEEEecCC----CCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceecee
Q psy9091          33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQN----GNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGA  106 (176)
Q Consensus        33 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~  106 (176)
                      +.|..+.++|++.+.||+|+||.||+|.+...    ++..||+|.+...  ......+..|..++..+.+|+||+.+++.
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   85 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   85 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeee
Confidence            34555667899999999999999999987530    2357999998754  33456678888888887689999999988


Q ss_pred             EEeccCCcceEEEEEecCCCCChhhhcCCC-----------------CCChhhH--hhhhhHHHHHHHHhcCCCcccccc
Q psy9091         107 YMKKHQTHSEIWFVMQREAEMPPPRALKPD-----------------ELDLDNL--QDCGDRYELGYVIGSGVCADVYEA  167 (176)
Q Consensus       107 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~  167 (176)
                      +...   ...++++|||+++|+|.++|...                 ..+....  ...+++.+|.|+|.+++   ||||
T Consensus        86 ~~~~---~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i---vHrD  159 (299)
T d1ywna1          86 CTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRD  159 (299)
T ss_dssp             ECST---TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             eccC---CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCC---cCCc
Confidence            7653   45789999999999999998511                 1222222  23377889999999998   9999


Q ss_pred             CCCCCcc
Q psy9091         168 LDTQNVT  174 (176)
Q Consensus       168 ~~~~nv~  174 (176)
                      |||+||.
T Consensus       160 lKp~NIL  166 (299)
T d1ywna1         160 LAARNIL  166 (299)
T ss_dssp             CCGGGEE
T ss_pred             CCcccee
Confidence            9999984

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.9e-23  Score=155.60  Aligned_cols=128  Identities=16%  Similarity=0.210  Sum_probs=104.2

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------hhHHHHHHHHHHHHhcc-CCCCcceeceeEEec
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------EFIDDIKEEYRMLRDLS-QHSNIPDFFGAYMKK  110 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------~~~~~~~~e~~~~~~l~-~h~niv~~~~~~~~~  110 (176)
                      .++|++.+.||+|+||.||+|.+.. ++..+|+|.+....       .....+.+|+.+++.+. .||||+++++.+.+ 
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~-   80 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-   80 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECC-CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee-
Confidence            4579999999999999999999988 88999999987531       11233678999999883 38999999999998 


Q ss_pred             cCCcceEEEEEecCCC-CChhhhcC-CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         111 HQTHSEIWFVMQREAE-MPPPRALK-PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       111 ~~~~~~~~lv~e~~~~-g~L~~~l~-~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                         .+.+++||||+.+ +++.+++. ....+.....  ..+.+.+|+|+|..++   |||||||+||.
T Consensus        81 ---~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~i---iHrDiKp~NIl  142 (273)
T d1xwsa_          81 ---PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENIL  142 (273)
T ss_dssp             ---SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCSGGGEE
T ss_pred             ---CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccccCcccceE
Confidence               7899999999976 67778876 3445544432  3388889999999998   99999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1e-22  Score=156.50  Aligned_cols=126  Identities=21%  Similarity=0.197  Sum_probs=98.3

Q ss_pred             CeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEecc--CCcceEE
Q psy9091          41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEIW  118 (176)
Q Consensus        41 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~--~~~~~~~  118 (176)
                      .|+.++.||+|+||.||+|.+.. ++..||+|.+.....   ...+|+.+++.+ +|+||+++++.|....  .+..++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~---~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~   95 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCD-SGELVAIKKVLQDKR---FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN   95 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSS---SCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECC-CCCEEEEEEECccch---HHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCceEEE
Confidence            59999999999999999999988 889999999976542   234699999999 9999999999986532  2245689


Q ss_pred             EEEecCCCCChhhhc---C-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRAL---K-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l---~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+++|.+..+.   . ....+....  ...+++.+|+|+|.+||   |||||||+||.
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~I---iHrDiKp~NIL  154 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLL  154 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCC---cccCCCcceEE
Confidence            999999866433332   1 233444332  23388889999999988   99999999984

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.5e-23  Score=152.40  Aligned_cols=126  Identities=19%  Similarity=0.248  Sum_probs=95.2

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCC--eEEEEEEeecC----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGN--KKVSIKVQKIN----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQT  113 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~~aik~i~~~----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~  113 (176)
                      .+|++.+.||+|+||.||+|.+....+  ..||+|.+...    ....+.+.+|+.+++.+ +||||+++++++.+    
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~----   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT----   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS----
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee----
Confidence            459999999999999999998753122  47899988753    23456799999999999 99999999999965    


Q ss_pred             cceEEEEEecCCCCChhhhcC--CCCCChhhHh--hhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         114 HSEIWFVMQREAEMPPPRALK--PDELDLDNLQ--DCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       114 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~--~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       +.+++||||+++|++.+.+.  ..........  ..+...+|.|+|.+++   +||||||+||.
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i---iHrDikp~NIl  143 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF---IHRDLAARNLL  143 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGEE
T ss_pred             -cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCE---eeeeecHHHhc
Confidence             45789999999999998876  3334443332  2377888999999988   99999999984

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1e-22  Score=154.10  Aligned_cols=133  Identities=13%  Similarity=0.179  Sum_probs=106.1

Q ss_pred             CCCCCCCCeEEeeEEeecCCeeEEEEEecC----CCCeEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeE
Q psy9091          34 NLQDCGDRYELGYVIGSGVCADVYEALDTQ----NGNKKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAY  107 (176)
Q Consensus        34 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~  107 (176)
                      .|....++|++.+.||+|+||.||+|.+..    ..+..||+|.++..  ......+.+|+.+++.+ +|+||+++++.+
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~   92 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVV   92 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEE
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-CCCCEeeeeeEE
Confidence            355566789999999999999999998742    02468999999754  23455789999999999 999999999999


Q ss_pred             EeccCCcceEEEEEecCCCCChhhhcCC-----------CCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         108 MKKHQTHSEIWFVMQREAEMPPPRALKP-----------DELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       108 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      ..    .+..++||||+++|+|.+++..           ........  ...+.+.+|.|+|.+++   |||||||+||.
T Consensus        93 ~~----~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~i---vHrDlk~~NiL  165 (308)
T d1p4oa_          93 SQ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM  165 (308)
T ss_dssp             CS----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC---BCSCCSGGGEE
T ss_pred             ec----CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCe---eeceEcCCcee
Confidence            88    7889999999999999998741           11122222  23377788999999998   99999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.1e-22  Score=151.81  Aligned_cols=132  Identities=18%  Similarity=0.196  Sum_probs=100.9

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh---hhHHHHHHHHHHHHhccCCCCcceeceeEEecc---
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP---EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH---  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~---~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~---  111 (176)
                      .-++|++++.||+|+||.||+|.+.. ++..||+|.+....   .....+.+|+.+++.+ +|+|++++++.+....   
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~   85 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRK-TGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPY   85 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-----
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccc
Confidence            34789999999999999999999987 88999999986542   2456688999999999 9999999999886522   


Q ss_pred             -CCcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 -QTHSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 -~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...+.+|++|||++++.+..+.. .........  ...+.+.+|.|+|.+||   +||||||+||.
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~i---vHrDlKp~NIL  149 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI---LHRDMKAANVL  149 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCCGGGEE
T ss_pred             cccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCE---EecCcCchhee
Confidence             11346899999999877665554 233333332  23377889999999998   99999999985

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.3e-21  Score=148.19  Aligned_cols=123  Identities=13%  Similarity=0.181  Sum_probs=98.3

Q ss_pred             EeeEEeecCCeeEEEEEecCCCC---eEEEEEEeecC--hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          44 LGYVIGSGVCADVYEALDTQNGN---KKVSIKVQKIN--PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        44 ~~~~lg~G~~g~v~~~~~~~~~~---~~~aik~i~~~--~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      ..+.||+|+||.||+|.+.. ++   ..+|+|.++..  ......+.+|+.++..+ +||||+++++.+...   .+.++
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~-~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~---~~~~~  105 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLD-NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS---EGSPL  105 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC-----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEET---TTEEE
T ss_pred             cceEEeecCCeEEEEEEEEC-CCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEec---CCceE
Confidence            35789999999999999865 32   36899998753  34567899999999999 999999999998762   46799


Q ss_pred             EEEecCCCCChhhhcCCCC--CChhh-H-hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALKPDE--LDLDN-L-QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~~~~--~~~~~-~-~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+++|+|.+++....  ..... . ...+.+.+|.|+|..++   +||||||+||.
T Consensus       106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i---iHrDLK~~NIL  162 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF---VHRDLAARNCM  162 (311)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC---CCSCCSGGGEE
T ss_pred             EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc---ccCCccHHhEe
Confidence            9999999999999987322  22222 1 22377888999999998   99999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.7e-22  Score=150.45  Aligned_cols=134  Identities=20%  Similarity=0.272  Sum_probs=99.5

Q ss_pred             CCCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecC---hhhHHHHHHHHHHHHhcc--CCCCcceeceeEEecc-
Q psy9091          38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN---PEFIDDIKEEYRMLRDLS--QHSNIPDFFGAYMKKH-  111 (176)
Q Consensus        38 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~---~~~~~~~~~e~~~~~~l~--~h~niv~~~~~~~~~~-  111 (176)
                      ..++|++++.||+|+||.||+|.+....+..||+|.++..   ......+.+|+.+++.+.  +||||+++++.+.... 
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            3468999999999999999999986513567999998653   112234567777766543  7999999999986532 


Q ss_pred             CCcceEEEEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         112 QTHSEIWFVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       112 ~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .....++++|||+++|.+.....  ....+....  ...+.+.+|+|+|..++   |||||||+||.
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i---vHrDiKp~NIL  148 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNIL  148 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE---EecCCCccEEE
Confidence            22567999999999877654433  333444332  23388889999999998   99999999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.1e-22  Score=153.22  Aligned_cols=128  Identities=15%  Similarity=0.223  Sum_probs=103.8

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCC--CCeEEEEEEeecC-----hhhHHHHHHHHHHHHhccCCCCcceeceeEEeccC
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQN--GNKKVSIKVQKIN-----PEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQ  112 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aik~i~~~-----~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~  112 (176)
                      ++|++++.||+|+||.||+|.+..+  ++..+|+|.++..     ......+.+|+.+++.+.+||||+++++.+.+   
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~---  100 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---  100 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE---
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc---
Confidence            5699999999999999999987321  4679999998642     12345678999999999455899999999999   


Q ss_pred             CcceEEEEEecCCCCChhhhcC-CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         113 THSEIWFVMQREAEMPPPRALK-PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       113 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                       ...++++|||+.+|+|.+++. .........  .+.+...+|.|+|..++   |||||||+||.
T Consensus       101 -~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~i---vHrDiKp~Nil  161 (322)
T d1vzoa_         101 -ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI---IYRDIKLENIL  161 (322)
T ss_dssp             -TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCCCGGGEE
T ss_pred             -CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCE---EeccCCcccee
Confidence             789999999999999999987 223332222  23377889999999999   99999999984

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.86  E-value=1.2e-21  Score=147.12  Aligned_cols=126  Identities=17%  Similarity=0.280  Sum_probs=102.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIW  118 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~  118 (176)
                      .++|++.+.||+|+||.||+|.+.. ++..+|+|.++.... ...+..|+..+..+.+|+|++.+++.+..    ....+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~-~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----~~~~~   77 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLL-NNQQVAIKFEPRRSD-APQLRDEYRTYKLLAGCTGIPNVYYFGQE----GLHNV   77 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETT-TTEEEEEEEEECCTT-SCCHHHHHHHHHHTTTCTTCCCEEEEEEE----TTEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEccccC-cHHHHHHHHHHHHhcCCCCCCEEEEEeec----CCccE
Confidence            4679999999999999999999988 889999999876432 23467788889988566999999999988    78999


Q ss_pred             EEEecCCCCChhhhcC--CCCCChhhH--hhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         119 FVMQREAEMPPPRALK--PDELDLDNL--QDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       119 lv~e~~~~g~L~~~l~--~~~~~~~~~--~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      +||||+ +|+|.+++.  .........  ...+.+.+|.|+|++|+   |||||||+||.
T Consensus        78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~gi---iHrDiKp~Nil  133 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL---VYRDIKPDNFL  133 (293)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCCGGGEE
T ss_pred             EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCc---eeccCCcccee
Confidence            999999 689999886  233444332  22366778999999998   99999999984

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=2.1e-21  Score=146.01  Aligned_cols=124  Identities=19%  Similarity=0.279  Sum_probs=96.8

Q ss_pred             CCCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCCCC-cceeceeEEeccCCcceE
Q psy9091          39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN-IPDFFGAYMKKHQTHSEI  117 (176)
Q Consensus        39 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h~n-iv~~~~~~~~~~~~~~~~  117 (176)
                      +++|++.+.||+|+||.||+|.+.. ++..||+|.+..... ...+..|+.+++.+ .|+| |+.+...+..    ....
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~-~~~~~~E~~i~~~l-~~~~~i~~~~~~~~~----~~~~   78 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIA-AGEEVAIKLECVKTK-HPQLHIESKIYKMM-QGGVGIPTIRWCGAE----GDYN   78 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEESCTT-SCCHHHHHHHHHHS-TTSTTCCCEEEEEEE----TTEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECC-CCCEEEEEEEchhcc-CHHHHHHHHHHHHc-cCCCcccEEEEEEec----CCEE
Confidence            4679999999999999999999987 889999999876432 23477899999998 5554 5555666666    7889


Q ss_pred             EEEEecCCCCChhhhcC--CCCCChhhHhhh--hhHHHHHHHHhcCCCccccccCCCCCc
Q psy9091         118 WFVMQREAEMPPPRALK--PDELDLDNLQDC--GDRYELGYVIGSGVCADVYEALDTQNV  173 (176)
Q Consensus       118 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~--~~~~~l~~lh~~~i~~~v~~~~~~~nv  173 (176)
                      ++||||++ |++.+.+.  ....+.......  +.+.+|+|+|.+|+   |||||||+||
T Consensus        79 ~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---iHrDiKp~NI  134 (299)
T d1ckia_          79 VMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF---IHRDVKPDNF  134 (299)
T ss_dssp             EEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCCCGGGE
T ss_pred             EEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCe---eeccCCHhhc
Confidence            99999995 56666554  334444443333  77888999999998   9999999998

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=7.7e-18  Score=129.13  Aligned_cols=129  Identities=20%  Similarity=0.253  Sum_probs=96.0

Q ss_pred             CCeEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhcc----------CCCCcceeceeEEe
Q psy9091          40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS----------QHSNIPDFFGAYMK  109 (176)
Q Consensus        40 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~----------~h~niv~~~~~~~~  109 (176)
                      .+|++++.||+|+||.||+|.+.. ++..||+|.++........+.+|+.+++.+.          .|+||+++++.+..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~-~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMV-NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            469999999999999999999988 8999999999887656667788888887762          35789999988865


Q ss_pred             ccCCcceEEEEEecCCCCChhhhcC----CCCCChhhH--hhhhhHHHHHHHHh-cCCCccccccCCCCCcc
Q psy9091         110 KHQTHSEIWFVMQREAEMPPPRALK----PDELDLDNL--QDCGDRYELGYVIG-SGVCADVYEALDTQNVT  174 (176)
Q Consensus       110 ~~~~~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~--~~~~~~~~l~~lh~-~~i~~~v~~~~~~~nv~  174 (176)
                      ..  ....+++++++..+.......    .........  ...+++.+|.|+|+ .||   +||||||+||.
T Consensus        92 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~I---vHrDlKp~NIl  158 (362)
T d1q8ya_          92 KG--PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI---IHTDIKPENVL  158 (362)
T ss_dssp             EE--TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE---ECSCCSGGGEE
T ss_pred             cc--ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCc---ccccCChhHee
Confidence            22  455677777665544322221    223333222  23377889999997 878   99999999984

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.70  E-value=8.3e-17  Score=113.20  Aligned_cols=115  Identities=18%  Similarity=0.177  Sum_probs=84.3

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-------------------hhHHHHHHHHHHHHhccCCCCcce
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-------------------EFIDDIKEEYRMLRDLSQHSNIPD  102 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-------------------~~~~~~~~e~~~~~~l~~h~niv~  102 (176)
                      +.+.+.||+|+||.||+|.+.  ++..+|+|.++...                   ........|...+..+ .|.+++.
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~--~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~   78 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE--KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPK   78 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET--TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCC
T ss_pred             chhCCEeeeCcceEEEEEECC--CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcce
Confidence            467899999999999999875  47899999875310                   1123446678888888 8888887


Q ss_pred             eceeEEeccCCcceEEEEEecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCCCccccccCCCCCcc
Q psy9091         103 FFGAYMKKHQTHSEIWFVMQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNVT  174 (176)
Q Consensus       103 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i~~~v~~~~~~~nv~  174 (176)
                      .++..      .  .+++|||++++.+.++-    .........+.+.++.++|.+|+   +|+|+||+||.
T Consensus        79 ~~~~~------~--~~lvme~~~~~~~~~l~----~~~~~~i~~ql~~~l~~lH~~gi---iHrDiKP~NIL  135 (191)
T d1zara2          79 VYAWE------G--NAVLMELIDAKELYRVR----VENPDEVLDMILEEVAKFYHRGI---VHGDLSQYNVL  135 (191)
T ss_dssp             EEEEE------T--TEEEEECCCCEEGGGCC----CSCHHHHHHHHHHHHHHHHHTTE---ECSCCSTTSEE
T ss_pred             EEEec------C--CEEEEEeeccccccchh----hHHHHHHHHHHHHHHHHHhhCCE---EEccCChhhee
Confidence            66432      2  27899999987665432    12222234577889999999998   99999999984

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.36  E-value=0.019  Score=39.93  Aligned_cols=110  Identities=12%  Similarity=0.014  Sum_probs=66.5

Q ss_pred             eEEeeEEeecCCeeEEEEEecCCCCeEEEEEEeecCh-hhHHHHHHHHHHHHhccCCCCcceeceeEEeccCCcceEEEE
Q psy9091          42 YELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINP-EFIDDIKEEYRMLRDLSQHSNIPDFFGAYMKKHQTHSEIWFV  120 (176)
Q Consensus        42 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~~-~~~~~~~~e~~~~~~l~~h~niv~~~~~~~~~~~~~~~~~lv  120 (176)
                      |.+.+..+-++.+.||+...   .+..+.+|...... .....+.+|..++..+..+--+..++.....    ++..++|
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~---~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~----~~~~~lv   88 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----DGWSNLL   88 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEEC---SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE----TTEEEEE
T ss_pred             eEEEEcCCCCCCCcEEEEEe---CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEec----CCceEEE
Confidence            45554433334467898765   34567788765532 2233467788887776445456677777766    6788999


Q ss_pred             EecCCCCChhhhcCCCCCChhhHhhhhhHHHHHHHHhcCC
Q psy9091         121 MQREAEMPPPRALKPDELDLDNLQDCGDRYELGYVIGSGV  160 (176)
Q Consensus       121 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~l~~lh~~~i  160 (176)
                      |++++|..+.+.... ...... ...+....++.+|....
T Consensus        89 ~~~l~G~~~~~~~~~-~~~~~~-~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          89 MSEADGVLCSEEYED-EQSPEK-IIELYAECIRLFHSIDI  126 (263)
T ss_dssp             EECCSSEEHHHHTTT-CSCHHH-HHHHHHHHHHHHHTSCC
T ss_pred             EEecccccccccccc-cccHHH-HHHHHHHHHHHHhccCc
Confidence            999998888665422 222211 11233345778886544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=92.91  E-value=0.52  Score=31.96  Aligned_cols=76  Identities=11%  Similarity=0.116  Sum_probs=47.8

Q ss_pred             EEeecCC-eeEEEEEecCCCCeEEEEEEeecChhhHHHHHHHHHHHHhccCC-CCcceeceeEEeccCCcceEEEEEecC
Q psy9091          47 VIGSGVC-ADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH-SNIPDFFGAYMKKHQTHSEIWFVMQRE  124 (176)
Q Consensus        47 ~lg~G~~-g~v~~~~~~~~~~~~~aik~i~~~~~~~~~~~~e~~~~~~l~~h-~niv~~~~~~~~~~~~~~~~~lv~e~~  124 (176)
                      .+..|.. ..||+.....  +..+.+|..+....  ..+..|...++.+..+ -.+.+++.....    .+..+++|+++
T Consensus        17 ~~~~G~s~~~v~r~~~~~--~~~~vlK~~~~~~~--~~l~~E~~~l~~L~~~gvpvP~v~~~~~~----~~~~~~v~~~i   88 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG--RPVLFVKTDLSGAL--NELQDEAARLSWLATTGVPCAAVLDVVTE----AGRDWLLLGEV   88 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT--SCCEEEEEECSCTT--SCHHHHHHHHHHHHTTTCCBCCEEEEEEC----SSCEEEEEECC
T ss_pred             EcCCcccCCeEEEEEeCC--CCEEEEEeCCccCH--hHHHHHHHHHHHHHhcCCCCCceeeeccc----ccceEEEEEee
Confidence            3445543 5688887643  55678887665431  2356666666655322 235566666666    67789999999


Q ss_pred             CCCChh
Q psy9091         125 AEMPPP  130 (176)
Q Consensus       125 ~~g~L~  130 (176)
                      +|-++.
T Consensus        89 ~G~~~~   94 (255)
T d1nd4a_          89 PGQDLL   94 (255)
T ss_dssp             SSEETT
T ss_pred             eccccc
Confidence            976654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=91.50  E-value=0.16  Score=37.62  Aligned_cols=78  Identities=22%  Similarity=0.229  Sum_probs=47.2

Q ss_pred             eeEEeecCCeeEEEEEecCCCCeEEEEEEeecC--------hhhHHHHHHHHHHHHhccCC--CCcceeceeEEeccCCc
Q psy9091          45 GYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN--------PEFIDDIKEEYRMLRDLSQH--SNIPDFFGAYMKKHQTH  114 (176)
Q Consensus        45 ~~~lg~G~~g~v~~~~~~~~~~~~~aik~i~~~--------~~~~~~~~~e~~~~~~l~~h--~niv~~~~~~~~~~~~~  114 (176)
                      .+.+|.|....||++.... .+..+++|.-.+.        +........|...+..+..+  ..++.++..  +    .
T Consensus        31 ~~eig~G~~N~vfrV~~~~-~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d----~  103 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQE-HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--D----T  103 (392)
T ss_dssp             EEECCSSSSEEEEEEEC-----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--E----T
T ss_pred             EEEeCCCceEeEEEEEeCC-CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--c----C
Confidence            4578999999999998765 5678888875431        11223345677777765333  234444433  3    3


Q ss_pred             ceEEEEEecCCCCCh
Q psy9091         115 SEIWFVMQREAEMPP  129 (176)
Q Consensus       115 ~~~~lv~e~~~~g~L  129 (176)
                      ...+++||++++..+
T Consensus       104 ~~~~lvmE~L~~~~~  118 (392)
T d2pula1         104 EMAVTVMEDLSHLKI  118 (392)
T ss_dssp             TTTEEEECCCTTSEE
T ss_pred             CCCEEEEeccCCccc
Confidence            445789999986543