Psyllid ID: psy9139

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
Protein Sequence
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTTLNVA
Secondary Structure (PSIPRED)
ccEEEEEEEEcccccEEEEEEEEEEccccccEEEEEEEEcccEEEEEEccccccccccEEEEEEEccccccEEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEcEEcccccccccccccccccccccccEEEcccccccEEEEEEEEEcccccccccEEEEEEEcccccccccccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEcccccccEEEEEEccccccccEEEEEccccEEEEEEcccccccccEEEEEEEEEcccccEEEEEcccccEEEEEcccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEEEEccccccccccccEEEcccccccccccccEEEEEEEcc
Coil and Loop (DISEMBL)
mvgnytcladnifgkddiyYQVTilsppgvpnillqsttthsisilwkpsydggaiITHYIVSYrdrtedwqsvHVDAEYREFTLtqlkcgthyKINIKLVnsigeskpsktiaastkgedqtdwiniplsnldealemPLVIENLLPATRYELTISakndagstnkNYVFATLSvnggkafhswspiqvhttlnva
Flexible Loop (DISEMBL)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTltqlkcgthYKINIKLvnsigeskpsktiaastkgedqtdwINIPLSNLDEALEMPLVIENLLPATRYELTIsakndagstnKNYVFATLSVNGgkafhswspiqvhttlnva
Low Complexity Region (SEG)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTTLNVA
Disordered region (IsUnstruct)
***NYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI******************TDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTT****
Disordered Region (DISOPRED)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK***************************ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHT*L***
Disordered Region (DISEMBL)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE*************EDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTTLNVA
Disordered Region (DISPRO)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK*********DQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTTLNVA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPIQVHTTLNVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	197	2.2.26 [Sep-21-2011]
Q8TD84	2053	Down syndrome cell adhesi	yes	N/A	0.893	0.085	0.293	2e-18
Q4VA61	2053	Down syndrome cell adhesi	yes	N/A	0.893	0.085	0.302	3e-18
O60469	2012	Down syndrome cell adhesi	no	N/A	0.893	0.087	0.287	6e-18
Q9ERC8	2013	Down syndrome cell adhesi	no	N/A	0.893	0.087	0.287	7e-18
Q8VHZ8	2013	Down syndrome cell adhesi	no	N/A	0.893	0.087	0.287	7e-18
Q9VS29	2074	Down syndrome cell adhesi	no	N/A	0.888	0.084	0.255	2e-13
Q8WZ42	34350	Titin OS=Homo sapiens GN=	no	N/A	0.436	0.002	0.413	2e-10
A2ASS6	35213	Titin OS=Mus musculus GN=	no	N/A	0.436	0.002	0.402	3e-09
Q23551	7158	Twitchin OS=Caenorhabditi	no	N/A	0.527	0.014	0.353	2e-07
Q9R044	1252	Nephrin OS=Rattus norvegi	no	N/A	0.588	0.092	0.312	2e-07

>sp|Q8TD84|DSCL1_HUMAN Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens GN=DSCAML1 PE=1 SV=2

 Score = 92.4 bits (228), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 39/215 (18%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            G YTC A N  G D I   + +  PP  P + +  T+  SI++ W P  +GG+ I  +++
Sbjct: 1359 GYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVL 1418

Query: 63   SYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
             Y  D +E+W+ V + +  R F L  LKCGT YK+ +   NS+G  + S+ I A T G +
Sbjct: 1419 QYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGRE 1478

Query: 122  QT---------------------DWIN--IPLS---------------NLDEALEMPLVI 143
             +                      W N   P++                L       + +
Sbjct: 1479 PSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFL 1538

Query: 144  ENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
              L  AT YEL + A N AG  N+   FATL  +G
Sbjct: 1539 TELREATWYELRMRACNSAGCGNETAQFATLDYDG 1573

Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Promotes both isoneuronal self-avoidance for creating an orderly neurite arborization in retinal rod bipolar cells and heteroneuronal self-avoidance to maintain mosaic spacing between AII amacrine cells.
Homo sapiens (taxid: 9606)

>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus musculus GN=Dscaml1 PE=1 SV=2

 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 39/215 (18%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            G YTC A N  G D I   + +  PP  P + +  T+  SI++ W P  +GG+ I  +++
Sbjct: 1359 GYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVL 1418

Query: 63   SYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-- 119
             Y  D +E+W+ V + +  R F L  LKCGT YK+ +   NS+G  + S+ I A T G  
Sbjct: 1419 QYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGRE 1478

Query: 120  ----EDQTDWINIPLSNLDEALE---------MPLVIE---------------------- 144
                +DQ  + +I  ++    L+           +V+E                      
Sbjct: 1479 PSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGVRANSSTEVFL 1538

Query: 145  -NLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
              L  AT YEL + A N AG  N+   FATL  +G
Sbjct: 1539 TELREATWYELRMRACNSAGCGNETAQFATLDYDG 1573

Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Promotes both isoneuronal self-avoidance for creating an orderly neurite arborization in retinal rod bipolar cells and heteroneuronal self-avoidance to maintain mosaic spacing between AII amacrine cells.

Mus musculus (taxid: 10090)

>sp|O60469|DSCAM_HUMAN Down syndrome cell adhesion molecule OS=Homo sapiens GN=DSCAM PE=1 SV=2

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 40/216 (18%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct: 1355 GYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query: 63   SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-- 119
             Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G  
Sbjct: 1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

Query: 120  ----EDQTDWINI-----------------PLSNL----------------DEALEMPLV 142
                ++Q  + +I                 P+++                   +L    +
Sbjct: 1475 PQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYI 1534

Query: 143  IENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
            + +L  AT YEL +   N AG   K   FATL+ +G
Sbjct: 1535 LYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDG 1570

Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38.

Homo sapiens (taxid: 9606)

>sp|Q9ERC8|DSCAM_MOUSE Down syndrome cell adhesion molecule homolog OS=Mus musculus GN=Dscam PE=1 SV=1

 Score = 90.5 bits (223), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 40/216 (18%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct: 1355 GYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query: 63   SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-- 119
             Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G  
Sbjct: 1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

Query: 120  ----EDQTDWINI-----------------PLSNL----------------DEALEMPLV 142
                ++Q  + +I                 P+++                   +L    +
Sbjct: 1475 PQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYI 1534

Query: 143  IENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
            + +L  AT YEL +   N AG   K   FATL+ +G
Sbjct: 1535 LYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDG 1570

Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38.

Mus musculus (taxid: 10090)

>sp|Q8VHZ8|DSCAM_RAT Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus GN=Dscam PE=1 SV=1

 Score = 90.5 bits (223), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 40/216 (18%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct: 1355 GYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query: 63   SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-- 119
             Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G  
Sbjct: 1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

Query: 120  ----EDQTDWINI-----------------PLSNL----------------DEALEMPLV 142
                ++Q  + +I                 P+++                   +L    +
Sbjct: 1475 PQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYI 1534

Query: 143  IENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
            + +L  AT YEL +   N AG   K   FATL+ +G
Sbjct: 1535 LYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDG 1570

Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.

Rattus norvegicus (taxid: 10116)

>sp|Q9VS29|DSCL_DROME Down syndrome cell adhesion molecule-like protein Dscam2 OS=Drosophila melanogaster GN=Dscam2 PE=2 SV=3

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 44/219 (20%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
            GNY+C  DN  G D + + + +  PP  P + + S T+ SI + WK  + G A IT Y +
Sbjct: 1378 GNYSCQVDNGIGTDRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGFTGNAPITGYTL 1437

Query: 63   SYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE-- 120
             YR    +   + +        L  L CG+ Y+I++   N +G S  S  +   T+G+  
Sbjct: 1438 FYRRANGNTDEMQLSRHASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSP 1497

Query: 121  -----------------------------------------DQTDWINIPLSNLDEALEM 139
                                                     D  D   + +SN  +  + 
Sbjct: 1498 GHPASTALLAPNSTSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKP-QR 1556

Query: 140  PLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             +VI NL P+T Y+L + A N AG +   + F TL+ +G
Sbjct: 1557 RIVINNLQPSTLYQLRMEAHNVAGISQAEFNFVTLTKDG 1595

Cell adhesion molecule.

Drosophila melanogaster (taxid: 7227)

>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 27    PPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR--E 82
             PP  P ++   TT HSIS+ W KP YDGG  I  Y++  +++ T+ W  VH +A  R  E
Sbjct: 30271 PPSAPRVV--DTTKHSISLAWTKPMYDGGTDIVGYVLEMQEKDTDQWYRVHTNATIRNTE 30328

Query: 83    FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
             FT+  LK G  Y   +  VN  G S+ S++IA
Sbjct: 30329 FTVPDLKMGQKYSFRVAAVNVKGMSEYSESIA 30360

Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 27    PPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR--E 82
             PP  P ++   TT  SIS+ W KP YDGG  I  Y++  +++ T+ W  VH +A  R  E
Sbjct: 31133 PPSAPRVV--DTTKRSISLAWTKPMYDGGTDIIGYVLEMQEKDTDQWCRVHTNATIRNNE 31190

Query: 83    FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
             FT+  LK G  Y   +  VN+ G S  S+T A
Sbjct: 31191 FTVPDLKMGQKYSFRVAAVNAKGMSDYSETTA 31222

Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q23551|UNC22_CAEEL Twitchin OS=Caenorhabditis elegans GN=unc-22 PE=1 SV=3

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 3    GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTH--SISILWKPSYD-GGAIITH 59
            G Y  + +N  GKD     VT+L  PG P   L+    H    ++ WKP  D GG  + H
Sbjct: 3926 GVYKIIVENEHGKDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWKPPTDNGGTDVLH 3985

Query: 60   YIVSYRDRTED-WQSVHVDAEYREFT--LTQLKCGTHYKINIKLVNSIGESKP 109
            YIV   D +   WQ V     + + T  + +L  G  Y   +K VN  GESKP
Sbjct: 3986 YIVEKMDTSRGTWQEVGT---FPDCTAKVNKLVPGKEYAFRVKAVNLQGESKP 4035

Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9R044|NPHN_RAT Nephrin OS=Rattus norvegicus GN=Nphs1 PE=1 SV=2

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 9/125 (7%)

Query: 5    YTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVS 63
            + C A N  G D    Q+  +S P  P  + + S + HS+ + WKP +DGG +   + + 
Sbjct: 932  FKCTATNALGSDHTNIQLVSISRPDPPLGLKVVSISPHSVGLEWKPGFDGG-LPQRFQIR 990

Query: 64   YRDRTEDWQSVHVD---AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK---TIAAST 117
            Y +  E    +HVD    +   FTLT LK  T Y+I +   N++G+S  +     ++ +T
Sbjct: 991  Y-EALETPGFLHVDVLPTQATTFTLTGLKPSTRYRIWLLASNALGDSGLTDKGIQVSVTT 1049

Query: 118  KGEDQ 122
             G DQ
Sbjct: 1050 PGPDQ 1054

Seems to play a role in the development or function of the kidney glomerular filtration barrier. Regulates glomerular vascular permeability. May anchor the podocyte slit diaphragm to the actin cytoskeleton. Plays a role in skeletal muscle formation through regulation of myoblast fusion.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
195055999	2029	GH17490 [Drosophila grimshawi] gi|193892	0.898	0.087	0.328	2e-24
195144188	2078	GL23930 [Drosophila persimilis] gi|19410	0.898	0.085	0.337	3e-24
198451327	2077	GA16078 [Drosophila pseudoobscura pseudo	0.898	0.085	0.337	4e-24
270016876	1656	hypothetical protein TcasGA2_TC006845 [T	0.893	0.106	0.324	6e-24
189242122	1700	PREDICTED: similar to CG31190 CG31190-PC	0.893	0.103	0.324	6e-24
195391526	2064	GJ22820 [Drosophila virilis] gi|19415249	0.898	0.085	0.328	2e-23
195497385	2214	GE25266 [Drosophila yakuba] gi|194182177	0.898	0.079	0.333	2e-23
194745280	2078	GF18608 [Drosophila ananassae] gi|190628	0.898	0.085	0.328	2e-23
161078374	2007	down syndrome cell adhesion molecule 3,	0.898	0.088	0.328	2e-23
442619604	2077	down syndrome cell adhesion molecule 3,	0.898	0.085	0.328	3e-23

>gi|195055999|ref|XP_001994900.1| GH17490 [Drosophila grimshawi] gi|193892663|gb|EDV91529.1| GH17490 [Drosophila grimshawi]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1387 LSGNYTCTANNLFGSDEIQYQVIAMKPPAAPQIIVQYASADSIRVSWDAPEDGGAPLQGY 1446

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    + W    +  E   +T+T LKCG  Y I +   N +G+  PS+ I   TKG+
Sbjct: 1447 TISYHTAGDTWAQTELLPENNAYTMTGLKCGNQYIIKMSAHNLVGDGAPSEEINVWTKGK 1506

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1507 ASQAPNGNELIATNATCVNLKLSSWHNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1566

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LP+  Y+L ISA NDAG T ++Y F+T S++G
Sbjct: 1567 REN-LIFCDFLPSKWYQLRISATNDAGKTTEHYHFSTTSLDG 1607

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195144188|ref|XP_002013078.1| GL23930 [Drosophila persimilis] gi|194102021|gb|EDW24064.1| GL23930 [Drosophila persimilis]

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 104/222 (46%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PPG P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1421 LSGNYTCTANNLFGSDEIQYQVIAMKPPGAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1480

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +S+    E W S  +  E   +T+T LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1481 SISHHTAGESWFSTELLPENNAYTITSLKCGNQYIIKMSAHNMVGSGVSSEEINVWTKGK 1540

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1541 ASQAPNGNELIATNATCVNLKLSSWNNGGCGIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1600

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T S++G
Sbjct: 1601 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTSIDG 1641

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198451327|ref|XP_001358324.2| GA16078 [Drosophila pseudoobscura pseudoobscura] gi|198131438|gb|EAL27462.2| GA16078 [Drosophila pseudoobscura pseudoobscura]

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 104/222 (46%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PPG P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1420 LSGNYTCTANNLFGSDEIQYQVIAMKPPGAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1479

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +S+    E W S  +  E   +T+T LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1480 SISHHTAGESWFSTELLPENNAYTITSLKCGNQYIIKMSAHNMVGSGVSSEEINVWTKGK 1539

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1540 ASQAPNGNELIATNATCVNLKLSSWNNGGCGIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1599

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T S++G
Sbjct: 1600 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTSIDG 1640

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270016876|gb|EFA13322.1| hypothetical protein TcasGA2_TC006845 [Tribolium castaneum]

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 46/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A N+FG D+I Y + +L PP  P + +Q +T+ SI + W    DGG+II  Y
Sbjct: 1118 LSGNYTCSAKNLFGDDNITYTLMVLMPPSAPILEVQFSTSRSIRLHWTQPEDGGSIIQGY 1177

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG- 119
             ++ +  T+DW S+ +  E+  + L  L+CG+ Y I +   N +G   PS  +  +TKG 
Sbjct: 1178 TLNTKHETDDWTSLELSPEHSVYNLDNLRCGSIYHIYLLAHNRVGNGSPSPILTVNTKGG 1237

Query: 120  ------EDQ-----------------------------------TDWINIPLSNLDEALE 138
                  E++                                     W  I  S LDE   
Sbjct: 1238 APLLPKEEELISTNATTLQLNLYNWPDGGCPILQFSIEYRIYGTKKWNLISNSILDEK-- 1295

Query: 139  MPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK 180
              ++I+NL PAT Y+L I+AKNDAG    ++  AT ++ GGK
Sbjct: 1296 --ILIQNLSPATWYQLKITAKNDAGKMTGHFNCATTTLGGGK 1335

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189242122|ref|XP_968319.2| PREDICTED: similar to CG31190 CG31190-PC [Tribolium castaneum]

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 46/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A N+FG D+I Y + +L PP  P + +Q +T+ SI + W    DGG+II  Y
Sbjct: 1158 LSGNYTCSAKNLFGDDNITYTLMVLMPPSAPILEVQFSTSRSIRLHWTQPEDGGSIIQGY 1217

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG- 119
             ++ +  T+DW S+ +  E+  + L  L+CG+ Y I +   N +G   PS  +  +TKG 
Sbjct: 1218 TLNTKHETDDWTSLELSPEHSVYNLDNLRCGSIYHIYLLAHNRVGNGSPSPILTVNTKGG 1277

Query: 120  ------EDQ-----------------------------------TDWINIPLSNLDEALE 138
                  E++                                     W  I  S LDE   
Sbjct: 1278 APLLPKEEELISTNATTLQLNLYNWPDGGCPILQFSIEYRIYGTKKWNLISNSILDEK-- 1335

Query: 139  MPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK 180
              ++I+NL PAT Y+L I+AKNDAG    ++  AT ++ GGK
Sbjct: 1336 --ILIQNLSPATWYQLKITAKNDAGKMTGHFNCATTTLGGGK 1375

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195391526|ref|XP_002054411.1| GJ22820 [Drosophila virilis] gi|194152497|gb|EDW67931.1| GJ22820 [Drosophila virilis]

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PPG P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1422 LSGNYTCTANNLFGSDEIQYQVIAMKPPGAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1481

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    + W    +  E   +T+T LKCG  Y I +   N +G+   S+ I   TKG+
Sbjct: 1482 TISYHTVGDSWSQTELLPENNAYTMTGLKCGNQYIIKMSAHNLVGDGAASEEINVWTKGK 1541

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1542 ASQAPNGNELIATNATCVNLKLSSWHNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1601

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDA  T ++Y F+T S++G
Sbjct: 1602 REN-LIFCDFLPAKWYQLRISATNDAAKTTEHYHFSTTSLDG 1642

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497385|ref|XP_002096076.1| GE25266 [Drosophila yakuba] gi|194182177|gb|EDW95788.1| GE25266 [Drosophila yakuba]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 102/222 (45%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI I W    DGGA +  Y
Sbjct: 1538 LSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRISWDAPDDGGAPLQGY 1597

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    E W    +  E   FT++ LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1598 TISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1657

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1658 ASQAPNANELIATNATCVNLKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1717

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T +++G
Sbjct: 1718 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDG 1758

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194745280|ref|XP_001955116.1| GF18608 [Drosophila ananassae] gi|190628153|gb|EDV43677.1| GF18608 [Drosophila ananassae]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1409 LSGNYTCTANNLFGSDEIQYQVIAMKPPAAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1468

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    E W +  +  E   +T++ LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1469 SISYHTAGESWSNTELLPENNAYTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1528

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1529 ASQAPNGNELIATNATCVNLKLSSWHNGGCGIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1588

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T S++G
Sbjct: 1589 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTSIDG 1629

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161078374|ref|NP_001097825.1| down syndrome cell adhesion molecule 3, isoform C [Drosophila melanogaster] gi|158030291|gb|ABW08696.1| down syndrome cell adhesion molecule 3, isoform C [Drosophila melanogaster]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1438 LSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1497

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    E W    +  E   FT++ LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1498 TISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1557

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1558 ASQAPNANELIATNATCVNLKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1617

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T +++G
Sbjct: 1618 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDG 1658

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442619604|ref|NP_732242.2| down syndrome cell adhesion molecule 3, isoform F [Drosophila melanogaster] gi|440217538|gb|AAF55426.3| down syndrome cell adhesion molecule 3, isoform F [Drosophila melanogaster]

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 45/222 (20%)

Query: 1    MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
            + GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI + W    DGGA +  Y
Sbjct: 1414 LSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGY 1473

Query: 61   IVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +SY    E W    +  E   FT++ LKCG  Y I +   N +G    S+ I   TKG+
Sbjct: 1474 TISYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1533

Query: 121  DQ--------------------TDWIN------------IPL------------SNLDEA 136
                                  + W N             PL            SN +E 
Sbjct: 1534 ASQAPNANELIATNATCVNLKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEEN 1593

Query: 137  LEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG 178
             E  L+  + LPA  Y+L ISA NDAG T ++Y F+T +++G
Sbjct: 1594 REN-LIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDG 1634

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
FB|FBgn0261046	2046	Dscam3 "Down syndrome cell adh	0.598	0.057	0.398	1.3e-26
FB|FBgn0263219	1918	Dscam4 "Down syndrome cell adh	0.593	0.061	0.358	8.5e-25
UNIPROTKB|F1MKB9	1859	DSCAM "Uncharacterized protein	0.604	0.064	0.358	4.6e-21
UNIPROTKB|O60469	2012	DSCAM "Down syndrome cell adhe	0.604	0.059	0.358	5.5e-21
MGI|MGI:1196281	2013	Dscam "Down syndrome cell adhe	0.604	0.059	0.358	7.1e-21
RGD|619992	2013	Dscam "Down syndrome cell adhe	0.604	0.059	0.358	7.1e-21
FB|FBgn0033159	2037	Dscam "Down syndrome cell adhe	0.593	0.057	0.294	7.7e-21
UNIPROTKB|F1NY98	1994	DSCAM "Uncharacterized protein	0.604	0.059	0.358	1.1e-20
ZFIN|ZDB-GENE-050310-7	2024	dscama "Down syndrome cell adh	0.604	0.058	0.366	3.7e-18
UNIPROTKB|E1BZF3	1870	E1BZF3 "Uncharacterized protei	0.604	0.063	0.358	1.5e-17

FB|FBgn0261046 Dscam3 "Down syndrome cell adhesion molecule 3" [Drosophila melanogaster (taxid:7227)]

 Score = 246 (91.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
 Identities = 47/118 (39%), Positives = 64/118 (54%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             GNYTC A+N+FG D+I YQV  + PP  P I++Q  +  SI + W    DGGA +  Y +
Sbjct:  1375 GNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQGYTI 1434

Query:    63 SYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             SY    E W    +  E   FT++ LKCG  Y I +   N +G    S+ I   TKG+
Sbjct:  1435 SYHTAGESWSITELLPENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1492

GO:0007155 "cell adhesion" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007156 "homophilic cell adhesion" evidence=IC

GO:0042802 "identical protein binding" evidence=IPI

GO:0005887 "integral to plasma membrane" evidence=ISM

FB|FBgn0263219 Dscam4 "Down syndrome cell adhesion molecule 4" [Drosophila melanogaster (taxid:7227)]

 Score = 234 (87.4 bits), Expect = 8.5e-25, Sum P(2) = 8.5e-25
 Identities = 42/117 (35%), Positives = 66/117 (56%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             GNYTC  +N +GKD+I Y + +  PP  PN+ + +  T S+ + W  +  GG+ I  Y++
Sbjct:  1386 GNYTCSVENTWGKDEIVYNIVVKVPPEAPNLTVINAYTDSLLLEWMDNSHGGSPILGYVI 1445

Query:    63 SYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
             +Y+    DW+ + VD++     LT L CGT Y++ I   N IG   P   + + TKG
Sbjct:  1446 NYKRDNGDWEELQVDSKTTSHLLTNLWCGTRYQLYITAYNKIGTGLPCDIVNSYTKG 1502

GO:0005887 "integral to plasma membrane" evidence=ISM

GO:0007155 "cell adhesion" evidence=ISS

GO:0042802 "identical protein binding" evidence=ISS

UNIPROTKB|F1MKB9 DSCAM "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 227 (85.0 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
 Identities = 43/120 (35%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct:  1200 GYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1259

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G++
Sbjct:  1260 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1319

GO:0070593 "dendrite self-avoidance" evidence=IEA

GO:0060060 "post-embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0048842 "positive regulation of axon extension involved in axon guidance" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0042327 "positive regulation of phosphorylation" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0007162 "negative regulation of cell adhesion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|O60469 DSCAM "Down syndrome cell adhesion molecule" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 43/120 (35%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct:  1355 GYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G++
Sbjct:  1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

GO:0007155 "cell adhesion" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0060060 "post-embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0042327 "positive regulation of phosphorylation" evidence=IDA

GO:0007162 "negative regulation of cell adhesion" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS;TAS

GO:0030426 "growth cone" evidence=ISS

GO:0048842 "positive regulation of axon extension involved in axon guidance" evidence=IDA

GO:0070593 "dendrite self-avoidance" evidence=ISS

GO:0030424 "axon" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007399 "nervous system development" evidence=TAS

MGI|MGI:1196281 Dscam "Down syndrome cell adhesion molecule" [Mus musculus (taxid:10090)]

 Score = 226 (84.6 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
 Identities = 43/120 (35%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct:  1355 GYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G++
Sbjct:  1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007162 "negative regulation of cell adhesion" evidence=IMP

GO:0007399 "nervous system development" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030424 "axon" evidence=IDA

GO:0030426 "growth cone" evidence=IDA

GO:0042327 "positive regulation of phosphorylation" evidence=ISO

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0048842 "positive regulation of axon extension involved in axon guidance" evidence=ISO;IDA

GO:0060060 "post-embryonic retina morphogenesis in camera-type eye" evidence=IMP

GO:0070593 "dendrite self-avoidance" evidence=IMP

RGD|619992 Dscam "Down syndrome cell adhesion molecule" [Rattus norvegicus (taxid:10116)]

 Score = 226 (84.6 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
 Identities = 43/120 (35%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G Y+C+A+N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct:  1355 GYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYIL 1414

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G++
Sbjct:  1415 QYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1474

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0007155 "cell adhesion" evidence=IEA

GO:0007162 "negative regulation of cell adhesion" evidence=ISO;ISS

GO:0007626 "locomotory behavior" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030424 "axon" evidence=ISO;ISS

GO:0030426 "growth cone" evidence=ISO;ISS

GO:0042327 "positive regulation of phosphorylation" evidence=ISO;ISS

GO:0048813 "dendrite morphogenesis" evidence=ISO

GO:0048842 "positive regulation of axon extension involved in axon guidance" evidence=ISO;IMP

GO:0060060 "post-embryonic retina morphogenesis in camera-type eye" evidence=ISO

GO:0070593 "dendrite self-avoidance" evidence=ISO;ISS

FB|FBgn0033159 Dscam "Down syndrome cell adhesion molecule" [Drosophila melanogaster (taxid:7227)]

 Score = 186 (70.5 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
 Identities = 35/119 (29%), Positives = 68/119 (57%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITH-YI 61
             G+Y+C A+N   KD I +++ +L+PP  P++ L +TTT ++++  KP ++G     H Y 
Sbjct:  1384 GDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKP-HEGDTAPLHGYT 1442

Query:    62 VSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             + Y+    +W++  V  + ++  +  L CG+ Y++     N+IG  + S  +   TKG+
Sbjct:  1443 LHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQ 1501

GO:0005887 "integral to plasma membrane" evidence=ISM;ISS

GO:0007411 "axon guidance" evidence=IGI;IMP;TAS

GO:0008046 "axon guidance receptor activity" evidence=IMP;NAS

GO:0007422 "peripheral nervous system development" evidence=IMP

GO:0016319 "mushroom body development" evidence=IMP

GO:0007413 "axonal fasciculation" evidence=IMP

GO:0006909 "phagocytosis" evidence=IMP

GO:0051635 "bacterial cell surface binding" evidence=IDA

GO:0048666 "neuron development" evidence=IMP

GO:0030424 "axon" evidence=IDA

GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

GO:0021551 "central nervous system morphogenesis" evidence=IMP

GO:0048846 "axon extension involved in axon guidance" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

UNIPROTKB|F1NY98 DSCAM "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 223 (83.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 43/120 (35%), Positives = 66/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G Y+C+A N +G D+I   + +  PP  P + +  TT+ SI++ W P  +GG+ I  YI+
Sbjct:  1341 GYYSCVASNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYIL 1400

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S  +    R + L  LKCGT YK  +   N +G  + S+ I A T G++
Sbjct:  1401 QYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKE 1460

GO:0005886 "plasma membrane" evidence=IEA

GO:0007162 "negative regulation of cell adhesion" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0042327 "positive regulation of phosphorylation" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0048842 "positive regulation of axon extension involved in axon guidance" evidence=IEA

GO:0060060 "post-embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0070593 "dendrite self-avoidance" evidence=IEA

ZFIN|ZDB-GENE-050310-7 dscama "Down syndrome cell adhesion molecule a" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 3.7e-18, P = 3.7e-18
 Identities = 44/120 (36%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G YTC+A N +G D+I   + +  PP  P + +  TTT SI++ W P  +GG+ I  YI+
Sbjct:  1362 GYYTCVASNNYGTDEIILNLQVQVPPDQPRLTVTKTTTTSITVTWTPGDNGGSSIRGYIL 1421

Query:    63 SY-RDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E W S+ +    R + L  L CGT YK  +   N++G  + S+ I A T G++
Sbjct:  1422 QYSEDNSEKWGSISISPSERSYRLENLNCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKE 1481

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0042074 "cell migration involved in gastrulation" evidence=IMP

UNIPROTKB|E1BZF3 E1BZF3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 43/120 (35%), Positives = 67/120 (55%)

Query:     3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV 62
             G YTC A N +G D I   + +  PP  P + +  T+  SI++ W P  +GG+ I  +++
Sbjct:  1364 GYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVL 1423

Query:    63 SYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              Y  D +E+W+ V + +  R F L  LKCGT YK+ +   NS+G  + S+ I A T G +
Sbjct:  1424 QYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGRE 1483

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007162 "negative regulation of cell adhesion" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA

GO:0070593 "dendrite self-avoidance" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	197
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	2e-15
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	7e-14
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	1e-11

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR-EFT 84
           P    N+ +   T+ S+++ W P  D G  IT Y+V YR++ + DW+ V V       +T
Sbjct: 1   PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYT 60

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           LT LK GT Y+  ++ VN  GES PS+++  +T
Sbjct: 61  LTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 63.8 bits (155), Expect = 7e-14
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAI--ITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           P    N+ +   T+ S+++ W+P  D G    I  Y V YR+   +W+ V+V      +T
Sbjct: 1   PSPPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYT 60

Query: 85  LTQLKCGTHYKINIKLVNSIGES 107
           LT LK GT Y+  ++ VN  GE 
Sbjct: 61  LTGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 57.8 bits (140), Expect = 1e-11
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREF 83
           S P   N+ +   T+ S+++ W P    G I T Y V YR  +  E+W+ + V      +
Sbjct: 1   SAPT--NLTVTDVTSTSLTLSWSPPPGNGPI-TGYEVEYRPVNGGEEWKEITVPGTTTSY 57

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPS 110
           TLT LK GT Y++ ++ VN  GE  PS
Sbjct: 58  TLTGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	197
KOG3513|consensus	1051		99.9
KOG4221|consensus	1381		99.87
KOG4221|consensus	1381		99.82
KOG3513|consensus	1051		99.61
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	99.48
KOG0196|consensus	996		99.39
KOG4222|consensus	1281		99.37
KOG0196|consensus	996		99.07
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	98.88
KOG4222|consensus	1281		98.63
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	98.56
cd05735	88	Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down	98.48
KOG4802|consensus	516		98.32
KOG4367|consensus	699		98.29
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	97.92
KOG4194|consensus	873		97.77
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	97.68
cd05723	71	Ig4_Neogenin Fourth immunoglobulin (Ig)-like domai	97.59
cd05863	67	Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain	97.56
cd05876	71	Ig3_L1-CAM Third immunoglobulin (Ig)-like domain o	97.49
PHA02826	227	IL-1 receptor-like protein; Provisional	97.48
cd05725	69	Ig3_Robo Third immunoglobulin (Ig)-like domain in	97.45
cd05731	71	Ig3_L1-CAM_like Third immunoglobulin (Ig)-like dom	97.44
cd05864	70	Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain	97.36
cd05763	75	Ig_1 Subgroup of the immunoglobulin (Ig) superfami	97.3
cd05746	69	Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like do	97.28
PHA02785	326	IL-beta-binding protein; Provisional	97.25
cd05736	76	Ig2_Follistatin_like Second immunoglobulin (Ig)-li	97.17
PF01108	107	Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH	97.15
cd04976	71	Ig2_VEGFR Second immunoglobulin (Ig)-like domain o	97.15
cd05726	90	Ig4_Robo Fhird immunoglobulin (Ig)-like domain in	97.14
PHA02785	326	IL-beta-binding protein; Provisional	97.09
KOG4802|consensus	516		97.08
cd05739	69	Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-li	97.06
PF09067	104	EpoR_lig-bind: Erythropoietin receptor, ligand bin	97.05
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	96.89
cd05738	74	Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-l	96.85
KOG4194|consensus	873		96.73
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	96.69
cd05760	77	Ig2_PTK7 Second immunoglobulin (Ig)-like domain of	96.67
cd05771	139	IgC_Tapasin_R Tapasin-R immunoglobulin-like domain	96.63
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	96.6
cd05743	78	Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domai	96.23
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	95.57
cd05762	98	Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of	95.48
cd05748	74	Ig_Titin_like Immunoglobulin (Ig)-like domain of t	95.14
cd05743	78	Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domai	95.03
KOG4258|consensus	1025		94.88
cd05854	85	Ig6_Contactin-2 Sixth Ig domain of contactin-2. Ig	94.79
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	94.75
cd05737	92	Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-	94.63
cd05851	88	Ig3_Contactin-1 Third Ig domain of contactin-1. Ig	94.35
cd04972	90	Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) o	94.28
cd05893	75	Ig_Palladin_C C-terminal immunoglobulin (Ig)-like	94.22
PLN02533	427	probable purple acid phosphatase	94.18
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	94.16
cd05861	84	Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like	94.11
cd05740	91	Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domai	94.0
cd05857	85	Ig2_FGFR Second immunoglobulin (Ig)-like domain of	94.0
cd05852	73	Ig5_Contactin-1 Fifth Ig domain of contactin-1. Ig	93.98
cd05892	75	Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like	93.95
cd05730	95	Ig3_NCAM-1_like Third immunoglobulin (Ig)-like dom	93.68
cd05894	86	Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of card	93.5
KOG4258|consensus	1025		93.46
cd05870	98	Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain o	93.31
cd05744	75	Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain	93.27
cd05891	92	Ig_M-protein_C C-terminal immunoglobulin (Ig)-like	93.26
cd05858	90	Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain o	93.19
cd05732	96	Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like dom	92.92
cd05866	92	Ig1_NCAM-2 First immunoglobulin (Ig)-like domain o	92.9
cd07702	72	Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain	92.84
cd05745	74	Ig3_Peroxidasin Third immunoglobulin (Ig)-like dom	92.7
cd05763	75	Ig_1 Subgroup of the immunoglobulin (Ig) superfami	92.66
cd05747	92	Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like	92.6
cd05760	77	Ig2_PTK7 Second immunoglobulin (Ig)-like domain of	92.47
cd05736	76	Ig2_Follistatin_like Second immunoglobulin (Ig)-li	92.34
cd05765	81	Ig_3 Subgroup of the immunoglobulin (Ig) superfami	92.3
cd05751	91	Ig1_LILRB1_like First immunoglobulin (Ig)-like dom	91.9
cd04970	85	Ig6_Contactin_like Sixth Ig domain of contactin. I	91.75
cd04978	76	Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like	91.74
cd04969	73	Ig5_Contactin_like Fifth Ig domain of contactin. I	91.41
cd04974	90	Ig3_FGFR Third immunoglobulin (Ig)-like domain of	91.23
cd05725	69	Ig3_Robo Third immunoglobulin (Ig)-like domain in	91.13
COG4733	952	Phage-related protein, tail component [Function un	90.91
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	90.76
KOG1948|consensus	1165		90.55
cd05867	76	Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like do	90.43
cd05735	88	Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down	90.27
KOG4228|consensus	1087		90.19
cd05723	71	Ig4_Neogenin Fourth immunoglobulin (Ig)-like domai	90.14
cd05869	97	Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain o	90.1
KOG3632|consensus	1335		90.05
KOG3515|consensus	741		89.99
cd04968	88	Ig3_Contactin_like Third Ig domain of contactin. I	89.8
cd05733	77	Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like dom	89.78
PF07679	90	I-set: Immunoglobulin I-set domain; InterPro: IPR0	89.5
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	89.06
cd04975	101	Ig4_SCFR_like Fourth immunoglobulin (Ig)-like doma	88.86
PHA02633	63	hypothetical protein; Provisional	88.78
cd05853	85	Ig6_Contactin-4 Sixth Ig domain of contactin-4. Ig	88.59
cd05746	69	Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like do	88.13
cd05731	71	Ig3_L1-CAM_like Third immunoglobulin (Ig)-like dom	87.78
cd05750	75	Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain	87.68
KOG4152|consensus	830		86.74
cd05868	76	Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain o	86.68
cd05729	85	Ig2_FGFR_like Second immunoglobulin (Ig)-like doma	86.37
COG4733	952	Phage-related protein, tail component [Function un	86.23
cd05865	96	Ig1_NCAM-1 First immunoglobulin (Ig)-like domain o	86.08
cd05876	71	Ig3_L1-CAM Third immunoglobulin (Ig)-like domain o	85.9
cd04977	92	Ig1_NCAM-1_like First immunoglobulin (Ig)-like dom	85.77
cd05874	77	Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of	85.6
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	85.35
cd05885	80	Ig2_Necl-4 Second immunoglobulin (Ig)-like domain	85.23
cd05863	67	Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain	85.16
cd05738	74	Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-l	84.22
cd05873	87	Ig_Sema4D_like Immunoglobulin (Ig)-like domain of	83.93
cd04976	71	Ig2_VEGFR Second immunoglobulin (Ig)-like domain o	82.59
cd05728	85	Ig4_Contactin-2-like Fourth Ig domain of the neura	81.93
cd05773	109	Ig8_hNephrin_like Eighth immunoglobulin-like domai	81.72
KOG4228|consensus	1087		81.48
cd05724	86	Ig2_Robo Second immunoglobulin (Ig)-like domain in	81.27

>KOG3513|consensus

Probab=99.90  E-value=6e-22  Score=158.34  Aligned_cols=180  Identities=23%  Similarity=0.414  Sum_probs=141.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEEEEe-C
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSVHV-D   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~~~~-~   77 (197)
                      |+|.|+|+|.....+.++.+.+++..+|+||. +.+...+.+++.|+|+++.|.+++|..|.|+.+ ...+.|..+.. +
T Consensus       588 ~~G~Y~C~aqT~~Ds~s~~A~l~V~gpPgpP~~v~~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~~vp  667 (1051)
T KOG3513|consen  588 DSGKYTCVAQTALDSASARADLLVRGPPGPPPDVHVDDISDTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVTTVP  667 (1051)
T ss_pred             cCceEEEEEEEeecchhcccceEEecCCCCCCceeEeeeccceEEEEeecCCCCCCCceEEeEEecCCCCCcceEeeECC
Confidence            78999999999999999999999999999998 999999999999999999988899999999999 46778987652 2


Q ss_pred             Ccc---cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce-EeecCCCC--------------------------------
Q psy9139          78 AEY---REFTLTQLKCGTHYKINIKLVNSIGESKPSKTI-AASTKGED--------------------------------  121 (197)
Q Consensus        78 ~~~---~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~-~~~t~~~~--------------------------------  121 (197)
                      ...   ...++.+|.|+..|+|||.|.|..|.+++|.+. ..+|.++.                                
T Consensus       668 ~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG  747 (1051)
T KOG3513|consen  668 GNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNG  747 (1051)
T ss_pred             CcccCccceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccC
Confidence            222   246788999999999999999999999988764 45665443                                


Q ss_pred             --------------CCCeeecCCCCCcccccceEEEc--CCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCC
Q psy9139         122 --------------QTDWINIPLSNLDEALEMPLVIE--NLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       122 --------------~~~w~~~~~~~~~~~~~~~~~i~--~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                                    ...|........   +...|.+.  ...|.+.|+++|+|+|..|.|+.+.......-++.|+.+
T Consensus       748 ~gfgY~Vswr~~g~~~~W~~~~v~~~---d~~~~V~~~~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~a  822 (1051)
T KOG3513|consen  748 PGFGYRVSWRPQGADKEWKEVIVSNQ---DQPRYVVSNESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVA  822 (1051)
T ss_pred             CCceEEEEEEeCCCCcccceeEeccc---CCceEEEcCCCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCC
Confidence                          123433222211   13344444  556699999999999999999977776666666666443

>KOG4221|consensus

Probab=99.87  E-value=2.5e-20  Score=149.44  Aligned_cols=176  Identities=22%  Similarity=0.312  Sum_probs=139.0

Q ss_pred             CCeeEEEE--EEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEe
Q psy9139           1 MVGNYTCL--ADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHV   76 (197)
Q Consensus         1 ~~g~y~c~--a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~   76 (197)
                      +++.|.|.  |.|..|+...+..+.|..+|+.|. +.....+..++.+.|++|.-++++|++|++.+... .+.|.  .+
T Consensus       492 p~t~Y~~rv~A~n~~g~g~sS~pLkV~t~pEgp~~~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~~~--~~  569 (1381)
T KOG4221|consen  492 PLTMYFFRVRAKNEAGSGESSAPLKVTTQPEGPVQLQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTGKEL--RV  569 (1381)
T ss_pred             cceeEEEEEeccCcccCCccCCceEEecCCCCCccccccccCcceEEEEecCCCCCCCCceEEEEEEEcCCCCceE--EE
Confidence            35667664  569999999999999999998887 88888899999999999988899999999999843 44444  45


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC------------------CCCeeecCCCCCc----
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED------------------QTDWINIPLSNLD----  134 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~------------------~~~w~~~~~~~~~----  134 (197)
                      ..+...++|.+|++.+.|.|+|.|.|..|.|..+..+.+.|....                  .+.|.........    
T Consensus       570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~it  649 (1381)
T KOG4221|consen  570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQIT  649 (1381)
T ss_pred             ecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEE
Confidence            566778999999999999999999999999999988888775332                  2333322211000    


Q ss_pred             --------------------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         135 --------------------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       135 --------------------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                                          .+....|.+.+|+|++.|.|+|.|.|..|.|+++......|++.
T Consensus       650 gYkIRy~~~~~~~~~~~t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~  713 (1381)
T KOG4221|consen  650 GYKIRYRKLSREDEVNETVVKGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPES  713 (1381)
T ss_pred             EEEEEecccCcccccceeecccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccc
Confidence                                01356788999999999999999999999999877766666543

>KOG4221|consensus

Probab=99.82  E-value=4.5e-19  Score=142.38  Aligned_cols=184  Identities=21%  Similarity=0.311  Sum_probs=144.3

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCC---------CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSP---------PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~---------P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      .|-|+|++.|..|.....+.+.+...         |..|. +.+.....+.+.+.|.+|...+..+..|.+.++.+...|
T Consensus       393 eg~yQcvaen~~G~a~a~a~l~vv~~p~~~~s~~~~sap~~lv~~~~~srfi~~tw~~p~~~~g~i~~~~v~~~~~~~~r  472 (1381)
T KOG4221|consen  393 EGFYQCVAENDAGSAQAAAQLEVVPQPASASSDLLPSAPRDLVANLVSSRFIQLTWRPPAQISGNISTYTVFYKVEGDVR  472 (1381)
T ss_pred             chhhhhhhccCcccccchhhheeccCCcccccCccccCCcceecccccceeEEEeecCccccCCCcceEEEEEecCCchh
Confidence            47899999999999888887755543         34444 777778889999999988777778899999999776666


Q ss_pred             EEEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC--------------CCCeeecCC------
Q psy9139          72 QSVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED--------------QTDWINIPL------  130 (197)
Q Consensus        72 ~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~--------------~~~w~~~~~------  130 (197)
                      .... ......+.++.+|.|.+.|.|+|.|.|..|.+..+..+.+.+.+..              .+.|....-      
T Consensus       473 er~~~tss~g~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV~t~pEgp~~~~a~ats~~ti~v~WepP~~~n~~I~  552 (1381)
T KOG4221|consen  473 ERLQNTSSPGIQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKVTTQPEGPVQLQAYATSPTTILVTWEPPPFGNGPIT  552 (1381)
T ss_pred             hhheeccCCceEEEeeecccceeEEEEEeccCcccCCccCCceEEecCCCCCccccccccCcceEEEEecCCCCCCCCce
Confidence            6544 2233378899999999999999999999999999999988876522              233322220      


Q ss_pred             ------CCC-c------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCCCC
Q psy9139         131 ------SNL-D------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSW  185 (197)
Q Consensus       131 ------~~~-~------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p~~  185 (197)
                            ... .      +.+...++|.||++.|.|.|+|.|.|.+|.|.++..+.+.++++.|.+|+.
T Consensus       553 ~yk~~ys~~~~~~~~~~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~  620 (1381)
T KOG4221|consen  553 GYKLFYSEDDTGKELRVENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQ  620 (1381)
T ss_pred             EEEEEEEcCCCCceEEEecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCc
Confidence                  000 0      023678999999999999999999999999999999999999999988775

>KOG3513|consensus

Probab=99.61  E-value=1e-13  Score=112.02  Aligned_cols=177  Identities=17%  Similarity=0.261  Sum_probs=123.1

Q ss_pred             eEEEEEEeCCCCceeEEE-EEecCCCCC----CE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEe-CCC-CcEE
Q psy9139           4 NYTCLADNIFGKDDIYYQ-VTILSPPGV----PN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRD-RTE-DWQS   73 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~-~~~~~~P~~----p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~-~~~-~~~~   73 (197)
                      +|+++|.|.+|..+.+.. -.+...+..    |. +.......+.+.+.|++..  .-+++-.+|+|.|+. ... .|..
T Consensus       688 eFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~~W~~  767 (1051)
T KOG3513|consen  688 EFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADKEWKE  767 (1051)
T ss_pred             EEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCcccce
Confidence            588999999997655442 244444444    43 6666777899999999943  445667899999993 333 7987


Q ss_pred             EEeC-CcccEEEE--CCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC-CC-----------------CCCeeecCC--
Q psy9139          74 VHVD-AEYREFTL--TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-ED-----------------QTDWINIPL--  130 (197)
Q Consensus        74 ~~~~-~~~~~~~i--~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~-~~-----------------~~~w~~~~~--  130 (197)
                      ..+. .+...+.+  ....|.+.|.+.|.+.|..|.|+.+....+.+.. .|                 ...|.....  
T Consensus       768 ~~v~~~d~~~~V~~~~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~n  847 (1051)
T KOG3513|consen  768 VIVSNQDQPRYVVSNESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDN  847 (1051)
T ss_pred             eEecccCCceEEEcCCCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccC
Confidence            7654 34455555  4477899999999999999999877665544322 22                 334422111  


Q ss_pred             ---------------C------CCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCc
Q psy9139         131 ---------------S------NLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK  180 (197)
Q Consensus       131 ---------------~------~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~  180 (197)
                                     .      .....+.....|.||++.|.|+|.|+|+|.+|.|+.+..+.+.+....+
T Consensus       848 G~l~gY~v~Y~~~~~~~~~~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~pP  918 (1051)
T KOG3513|consen  848 GKLTGYEVKYWKINEKEGSLSRVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAPP  918 (1051)
T ss_pred             CccceeEEEEEEcCCCcccccceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCCC
Confidence                           0      0001346789999999999999999999999999988888776544433

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=99.48  E-value=1e-12  Score=78.05  Aligned_cols=80  Identities=35%  Similarity=0.659  Sum_probs=67.3

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +|. +.+...+.+++.|.|.++...++.+.+|.|+|+.....  +....+......+++.+|.|++.|.|+|+|.+..|.
T Consensus         2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g~   81 (85)
T PF00041_consen    2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSDGE   81 (85)
T ss_dssp             SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETTEE
T ss_pred             cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCCcC
Confidence            455 88888999999999999876677899999999954333  666667777779999999999999999999999987


Q ss_pred             CCC
Q psy9139         107 SKP  109 (197)
Q Consensus       107 ~~~  109 (197)
                      |.+
T Consensus        82 g~~   84 (85)
T PF00041_consen   82 GPP   84 (85)
T ss_dssp             EEE
T ss_pred             cCC
Confidence            754

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>KOG0196|consensus

Probab=99.39  E-value=3e-11  Score=95.06  Aligned_cols=152  Identities=19%  Similarity=0.300  Sum_probs=96.9

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCC-ccccEEEEEEEeCC---CCcE---------EEEeCCcccEEEECCCCCCC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGG-AIITHYIVSYRDRT---EDWQ---------SVHVDAEYREFTLTQLKCGT   92 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~-~~i~~y~v~~~~~~---~~~~---------~~~~~~~~~~~~i~~L~p~~   92 (197)
                      .||++|...+..+..+++.|.|.+|.+.+ ..-..|.+..+.-.   +.-.         .-+..-..+..++.+|.|.+
T Consensus       330 ~PPSaP~nlis~vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~ah~  409 (996)
T KOG0196|consen  330 RPPSAPRNLISNVNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLLAHT  409 (996)
T ss_pred             CCCCccceeeeecccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEecccccc
Confidence            56788874444589999999999997444 34344666655211   1101         11123456789999999999


Q ss_pred             EEEEEEEEEcCCcCCCCC----CceEeecCCCC-----------------CCCeeecCCCC---------------Cc--
Q psy9139          93 HYKINIKLVNSIGESKPS----KTIAASTKGED-----------------QTDWINIPLSN---------------LD--  134 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s----~~~~~~t~~~~-----------------~~~w~~~~~~~---------------~~--  134 (197)
                      .|+|.|.|.|....-.+.    ..+.++|..+.                 ...|.......               ..  
T Consensus       410 ~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~~  489 (996)
T KOG0196|consen  410 NYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDERS  489 (996)
T ss_pred             ccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccccc
Confidence            999999999987543222    23445553322                 23333222110               00  


Q ss_pred             ----ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         135 ----EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       135 ----~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                          ....+..++.+|+|++.|.|+|+|.+.+|.|..+..+-..|..
T Consensus       490 ~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~  536 (996)
T KOG0196|consen  490 YSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLP  536 (996)
T ss_pred             eeEEecccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecC
Confidence                0125578999999999999999999999999966555444443

>KOG4222|consensus

Probab=99.37  E-value=2.4e-12  Score=104.03  Aligned_cols=183  Identities=21%  Similarity=0.341  Sum_probs=127.8

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEec---------------CCCCCCE-EEEEeecCCeEEEEeeeCCC-CCccccEEEEEE
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTIL---------------SPPGVPN-ILLQSTTTHSISILWKPSYD-GGAIITHYIVSY   64 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~---------------~~P~~p~-~~~~~~~~~~~~l~W~~~~~-~~~~i~~y~v~~   64 (197)
                      .|.|+|.|.+..|+..-++.+.+.               ..|.+|. ..+..++.+++.|+|.+... +..++.+|++++
T Consensus       486 tG~YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~sg~vP~s~yiiea  565 (1281)
T KOG4222|consen  486 TGRYTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSPSGAVPASGYIIEA  565 (1281)
T ss_pred             CcceeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCCCCccccchhHHHH
Confidence            699999999999988777777664               2245554 66778889999999999764 556788999987


Q ss_pred             E--eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce-EeecCCCC--------------------
Q psy9139          65 R--DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI-AASTKGED--------------------  121 (197)
Q Consensus        65 ~--~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~-~~~t~~~~--------------------  121 (197)
                      .  +....|...--....+.+.|.+|+|+..|.|.|++.|..|.+.++... .+++.++.                    
T Consensus       566 fs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~~S~~vrta~a~~~~a~ad~~k~~~~ls~~l~  645 (1281)
T KOG4222|consen  566 FSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPSTSSDPVRTAPADAAAAGADHQKVQRELSNELL  645 (1281)
T ss_pred             hhhhhcccccccccccccceeeecCcCccceeeeeeeccccccccCCcccCCccccCCCChhhhhhhHHHHHHhhcccce
Confidence            6  456678766555667789999999999999999999999987765432 23333322                    


Q ss_pred             -------------CCCe------------------eecCCCCCc----c---cccceEEEcCCCCCCeEEEEEEEEcCCC
Q psy9139         122 -------------QTDW------------------INIPLSNLD----E---ALEMPLVIENLLPATRYELTISAKNDAG  163 (197)
Q Consensus       122 -------------~~~w------------------~~~~~~~~~----~---~~~~~~~i~~L~p~t~Y~v~V~a~n~~G  163 (197)
                                   ...|                  .........    .   .-...+.+.+|+|++.|+|.++-+-..|
T Consensus       646 ~l~~~~~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~~~a~~s~~~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~  725 (1281)
T KOG4222|consen  646 RLSNPNVLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGSQLAQWSNAGVTVPTPESVVVPNLKPGTNYEFFVRPFFPHG  725 (1281)
T ss_pred             eeccccccchhheeeeeeeecccCcccccceEEEeccCccccccccccceeccCCcceeccccCCCccceeeccCccCCC
Confidence                         1222                  221110000    0   1145689999999999999999987655


Q ss_pred             C---CCcceEEEEeeeCCCcCCCC
Q psy9139         164 S---TNKNYVFATLSVNGGKAFHS  184 (197)
Q Consensus       164 ~---~~~~~~~~t~~~~~~~~~p~  184 (197)
                      .   +..+......+++..|.+|+
T Consensus       726 ~s~~g~pS~sk~alt~e~~PSapp  749 (1281)
T KOG4222|consen  726 YSIQGAPSNSKTALTLEEPPSAPP  749 (1281)
T ss_pred             cceecCCcccccccccccCCCCCC
Confidence            4   33454455566666665544

>KOG0196|consensus

Probab=99.07  E-value=8.5e-09  Score=81.71  Aligned_cols=93  Identities=22%  Similarity=0.276  Sum_probs=75.0

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +..+.++....+.++++|+|..|..+++.|..|.|.|.... .......+....+..++.+|.|++.|.|+|+|....|.
T Consensus       444 s~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~~~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~  523 (996)
T KOG0196|consen  444 SPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDERSYSTLKTKTTTATITGLKPGTVYVFQVRARTAAGY  523 (996)
T ss_pred             CccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccccceeEEecccceEEeeccCCCcEEEEEEEEecccCC
Confidence            33344888999999999999999888888999999998432 22222234556678999999999999999999999999


Q ss_pred             CCCCCceEeecCCC
Q psy9139         107 SKPSKTIAASTKGE  120 (197)
Q Consensus       107 ~~~s~~~~~~t~~~  120 (197)
                      |..|....+.|...
T Consensus       524 G~~S~~~~fqT~~~  537 (996)
T KOG0196|consen  524 GPYSGKHEFQTLPS  537 (996)
T ss_pred             CCCCCceeeeecCc
Confidence            99999888887665

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=98.88  E-value=1e-07  Score=56.63  Aligned_cols=83  Identities=39%  Similarity=0.728  Sum_probs=61.9

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeC-CcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVD-AEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~-~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .+|. +.+......++.|.|.++......+..|.+.+... ...|..+... .....+.+.+|.|++.|.++|.+.+..|
T Consensus         2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~   81 (93)
T cd00063           2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGG   81 (93)
T ss_pred             cCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEEeeccCCcccEEEEccccCCCEEEEEEEEECCCc
Confidence            3444 66666678999999999764334567899998843 3566655533 3677899999999999999999998877


Q ss_pred             CCCCCC
Q psy9139         106 ESKPSK  111 (197)
Q Consensus       106 ~~~~s~  111 (197)
                      .+.++.
T Consensus        82 ~~~~s~   87 (93)
T cd00063          82 ESPPSE   87 (93)
T ss_pred             cCCCcc
Confidence            776554

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>KOG4222|consensus

Probab=98.63  E-value=6.1e-07  Score=73.80  Aligned_cols=31  Identities=23%  Similarity=0.424  Sum_probs=27.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.|.+|+|...|.|.|+|.|..|.+.++
T Consensus       583 ~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps  613 (1281)
T KOG4222|consen  583 TTTYAIRGLKPNLSYLFLVRAENEQGISDPS  613 (1281)
T ss_pred             cceeeecCcCccceeeeeeeccccccccCCc
Confidence            5679999999999999999999999987743

>smart00060 FN3 Fibronectin type 3 domain

Probab=98.56  E-value=2.1e-06  Score=49.50  Aligned_cols=72  Identities=38%  Similarity=0.706  Sum_probs=50.3

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe----CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD----RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~----~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +.+......++.+.|.++.....  .+|.+.+..    ....|...........+.+.+|.|++.|.++|.+.+..|.
T Consensus         7 ~~~~~~~~~~~~v~W~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~g~   82 (83)
T smart00060        7 LRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAGE   82 (83)
T ss_pred             EEEEEEeCCEEEEEECCCCCCCC--CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEcccCC
Confidence            56666666799999997653322  557776652    1123555544444678999999999999999999987553

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>cd05735 Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=98.48  E-value=2.8e-07  Score=54.92  Aligned_cols=31  Identities=35%  Similarity=0.619  Sum_probs=29.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP   31 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p   31 (197)
                      +.|.|+|.|.|..|+....+.|.+..+|.+|
T Consensus        58 D~G~YtC~A~N~~G~~~~~~~L~V~~~P~~P   88 (88)
T cd05735          58 DSGFFSCHAINSYGEDRGIIQLTVQEPPDPP   88 (88)
T ss_pred             cCEEEEEEEEcCCCcceEEEEEEEeCCCCCC
Confidence            5799999999999999999999999999987

Ig8_DSCAM: the eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>KOG4802|consensus

Probab=98.32  E-value=1.6e-05  Score=58.85  Aligned_cols=132  Identities=23%  Similarity=0.324  Sum_probs=82.7

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEE----EEEE-------eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYI----VSYR-------DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~----v~~~-------~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      +........++.+.|.....  .-+..+.    ..|.       .....|+.+......+.+..+++.||..|+|+|.|.
T Consensus       152 ~~y~r~~~g~~av~w~~~~~--~~v~~~~~~vr~~w~~g~hase~~~thwQtv~~t~~e~~~~~t~~rPgRwyefrvaav  229 (516)
T KOG4802|consen  152 ILYFRRSRGSHAVDWKIESS--LLVYYVHVEVRSHWGRGFHASELGPTHWQTVEKTMEENTYIFTDMRPGRWYEFRVAAV  229 (516)
T ss_pred             hhhhhhccCceeeeeeeccc--cceeeeehhhhhhhcccccccccccccceeeeecCCCceeeeeecCcceeEEEEEeee
Confidence            55555667778999987542  1122111    1222       123457777777777789999999999999999999


Q ss_pred             cCCcC---CCCCCceEeecC----CCC--------------------------------CCCeeecCCCC--------Cc
Q psy9139         102 NSIGE---SKPSKTIAASTK----GED--------------------------------QTDWINIPLSN--------LD  134 (197)
Q Consensus       102 ~~~g~---~~~s~~~~~~t~----~~~--------------------------------~~~w~~~~~~~--------~~  134 (197)
                      |..|.   +.++........    +.|                                .+.|....+..        .-
T Consensus       230 n~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~sdlPv~~Yki~Ws~~v~s~k~~m~tks~~  309 (516)
T KOG4802|consen  230 NAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSKSDLPVEKYKITWSLYVNSAKASMITKSSY  309 (516)
T ss_pred             ecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCCCCCcceeeEEEeehhhhhhhhhcccccce
Confidence            87765   455554433322    122                                23333222100        00


Q ss_pred             ccccceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         135 EALEMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       135 ~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      .-+...+.|++|.|+..|.|.|+|....|.+.
T Consensus       310 ~k~thq~si~~L~Pns~Y~VevqAi~y~g~~r  341 (516)
T KOG4802|consen  310 VKDTHQFSIKELLPNSSYYVEVQAISYLGSRR  341 (516)
T ss_pred             eeccchhhhhhcCCCCeEEEEEEEEEeccCcc
Confidence            00122456999999999999999999999876

>KOG4367|consensus

Probab=98.29  E-value=2.3e-06  Score=63.69  Aligned_cols=100  Identities=23%  Similarity=0.353  Sum_probs=78.0

Q ss_pred             CCCCCEEEEEe--ecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPNILLQS--TTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~~~~~~--~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .|..|-+....  ...+++++.|+.|...+.++.+|.++..+. ++.+.++. .+..+.+++.+|.-++.|.-||.+.|.
T Consensus       437 vpatpilq~~ec~t~nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frevy-~g~etmctvdglhfns~y~arvka~n~  515 (699)
T KOG4367|consen  437 VPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY-VGKETMCTVDGLHFNSTYNARVKAFNK  515 (699)
T ss_pred             CCCCceeehhhhhccCCceEEEeecCCCCCCCCcceEEEeecCCCCceeEEE-ecCceeEEecceecchhHHHHHHHhhc
Confidence            45555444333  457899999997665567889999999854 45566555 566788999999999999999999999


Q ss_pred             CcCCCCCCceEeecCCCCCCCeeecCC
Q psy9139         104 IGESKPSKTIAASTKGEDQTDWINIPL  130 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~~~~~~w~~~~~  130 (197)
                      .|.+++++.+..+|.   .+.|.....
T Consensus       516 tg~s~ys~tl~lqts---~vawfqlt~  539 (699)
T KOG4367|consen  516 TGVSPYSKTLVLQTS---EVAWFQLTP  539 (699)
T ss_pred             cCCCcccceeEeeec---ceeeeeccC
Confidence            999999999888775   566766554

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=97.92  E-value=9.3e-06  Score=47.71  Aligned_cols=31  Identities=32%  Similarity=0.500  Sum_probs=27.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|++|
T Consensus        55 ~~~~~i~~L~p~t~Y~~~v~a~~~~g~g~~S   85 (85)
T PF00041_consen   55 ETSYTITGLQPGTTYEFRVRAVNSDGEGPPS   85 (85)
T ss_dssp             SSEEEEESCCTTSEEEEEEEEEETTEEEEEE
T ss_pred             eeeeeeccCCCCCEEEEEEEEEeCCcCcCCC
Confidence            3379999999999999999999999987653

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>KOG4194|consensus

Probab=97.77  E-value=0.00049  Score=54.21  Aligned_cols=109  Identities=18%  Similarity=0.234  Sum_probs=73.2

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-CcE----
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQ----   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~~~----   72 (197)
                      +.|.|+|++.|..|+ .+..+.+.+...|.--.  ..+.-....-..+.|.+.-++..     .|.|....+ ++.    
T Consensus       585 d~grYQCVvtN~FGStysqk~KltV~~~PsFtktP~dltl~tg~mArl~CaAtG~P~P-----eIawqkdggtdFPAA~e  659 (873)
T KOG4194|consen  585 DEGRYQCVVTNHFGSTYSQKAKLTVNQAPSFTKTPEDLTLRTGQMARLECAATGHPRP-----EIAWQKDGGTDFPAARE  659 (873)
T ss_pred             cCceEEEEEecccCcchhheeEEEeeccCccccCcccceeecccceeeeeeccCCCCc-----ceeehhcCCCCCchhhh
Confidence            579999999999997 45677888887774322  11222344556777776444433     355653222 222    


Q ss_pred             -EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceE
Q psy9139          73 -SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA  114 (197)
Q Consensus        73 -~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~  114 (197)
                       ...+-.....+-|++.++.....|.|.|.|.+|.-.....+.
T Consensus       660 RRl~Vmpedd~f~Itnvk~eD~GiYtC~A~n~AG~isanAtL~  702 (873)
T KOG4194|consen  660 RRLHVMPEDDVFFITNVKIEDQGIYTCTAQNVAGQISANATLT  702 (873)
T ss_pred             heeeecCCCCEEEEecccccccceeEEeeeccccceeeceEEE
Confidence             334566677889999999999999999999999765544443

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=97.68  E-value=0.00039  Score=42.81  Aligned_cols=88  Identities=26%  Similarity=0.407  Sum_probs=52.9

Q ss_pred             CCCEEEEEeecCCeEEEEeeeCC-----CCC-c------cccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          29 GVPNILLQSTTTHSISILWKPSY-----DGG-A------IITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        29 ~~p~~~~~~~~~~~~~l~W~~~~-----~~~-~------~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      +||.+.+ ......+.|.+.+|.     ... .      .-..|.|.++.....-...........+.|.+|.|++.|-+
T Consensus         4 gPP~v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~YCv   82 (106)
T PF09294_consen    4 GPPSVNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNEKKKEIETKNSSVTLSDLKPGTNYCV   82 (106)
T ss_dssp             -SSEEEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSCEEEEEESSSEEEEEES--TTSEEEE
T ss_pred             cCCEEEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCccceEEEeecCCEEEEeCCCCCCCEEE
Confidence            4666555 677888999988875     111 0      11458888775444323334455666789999999999999


Q ss_pred             EEEEEc-CC-cCCCCCCceEeec
Q psy9139          97 NIKLVN-SI-GESKPSKTIAAST  117 (197)
Q Consensus        97 ~v~a~~-~~-g~~~~s~~~~~~t  117 (197)
                      +|.+.. .. ..+.+|....+.|
T Consensus        83 ~V~~~~~~~~~~s~~S~~~C~~t  105 (106)
T PF09294_consen   83 SVQAFSPSQNKNSQPSEPQCITT  105 (106)
T ss_dssp             EEEEEECSSTEEEEEBSEEEEE-
T ss_pred             EEEEEeccCCCcCCCCCCEeEeC
Confidence            999932 22 2355666555544

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>cd05723 Ig4_Neogenin Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=97.59  E-value=0.0001  Score=41.89  Aligned_cols=24  Identities=33%  Similarity=0.477  Sum_probs=20.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|+..+++.|.+
T Consensus        48 D~G~Y~C~A~N~~G~~~~~~~L~V   71 (71)
T cd05723          48 DEGFYQCIAENDVGNVQASAQLII   71 (71)
T ss_pred             cCEEEEEEEEcCCCEEEEEEEEEC
Confidence            479999999999999888887754

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd05863 Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3)

Probab=97.56  E-value=0.00015  Score=40.60  Aligned_cols=24  Identities=17%  Similarity=0.112  Sum_probs=19.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|+|.|..|..+..+.+.+
T Consensus        42 D~G~YtC~a~N~~g~~~~~~~~~l   65 (67)
T cd05863          42 SAGTYTLVLWNSAAGLEKRISLEL   65 (67)
T ss_pred             HCEEEEEEEEECCccEEEEEEEEE
Confidence            479999999999998777666544

Ig2_VEGFR-3: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-3 (Flt-4) binds two members of the VEGF family (VEGF-C and -D) and is involved in tumor angiogenesis and growth.

>cd05876 Ig3_L1-CAM Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=97.49  E-value=0.0002  Score=40.65  Aligned_cols=24  Identities=38%  Similarity=0.574  Sum_probs=20.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      +.|.|+|.|.|..|.....+.+.|
T Consensus        47 D~G~Y~C~a~N~~G~~~~~~~l~V   70 (71)
T cd05876          47 DDGEYVCTAENSEGSARHHYTVTV   70 (71)
T ss_pred             hCEEEEEEEEcCCCeEEEEEEEEE
Confidence            479999999999999888887765

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>PHA02826 IL-1 receptor-like protein; Provisional

Probab=97.48  E-value=0.0024  Score=45.07  Aligned_cols=97  Identities=9%  Similarity=-0.004  Sum_probs=58.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCC--CccccEEEEEEEeCCCC---cEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDG--GAIITHYIVSYRDRTED---WQSVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~--~~~i~~y~v~~~~~~~~---~~~~~   75 (197)
                      ++|.|+|.|.|..|.....+.+.+...+.  .+  .......+.|.|......  +.+  .-.+.|......   -....
T Consensus       109 DsG~Y~C~a~N~~~~~~~~i~L~V~~~~~--~~--~~~~G~~v~L~C~~~~~~~~~~p--~p~I~WyKng~~l~~~~r~~  182 (227)
T PHA02826        109 DEGIYICTISSGNICEESTIRLTFDSGTI--NY--QFNSGKDSKLHCYGTDGISSTFK--DYTLTWYKNGNIVLYTDRIQ  182 (227)
T ss_pred             HCEEEEEEEEECCcceEEEEEEEEecCCc--cc--eEecCCCEEEEeeCCCCccccCC--CceEEEEECCEECCCCCCEE
Confidence            37999999999998888888887743321  12  223467788888753211  111  113444321100   00122


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      +......+.|.++.......|.|.+...
T Consensus       183 ~~~~~~~L~I~~V~~~DsG~YtC~a~~~  210 (227)
T PHA02826        183 LRNNNSTLVIKSATHDDSGIYTCNLRFN  210 (227)
T ss_pred             EeCCCCEEEECcCCHHhCEEEEEEEEEe
Confidence            2334457899999999999999988864

>cd05725 Ig3_Robo Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=97.45  E-value=0.0002  Score=40.35  Aligned_cols=24  Identities=38%  Similarity=0.618  Sum_probs=20.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|.....+.+.|
T Consensus        46 D~G~Y~C~a~N~~G~~~~~~~l~V   69 (69)
T cd05725          46 DEGSYTCEAENMVGKIEASASLTV   69 (69)
T ss_pred             HCEEEEEEEEcCCCcEEEEEEEEC
Confidence            579999999999999888777653

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05731 Ig3_L1-CAM_like Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=97.44  E-value=0.00021  Score=40.43  Aligned_cols=24  Identities=33%  Similarity=0.512  Sum_probs=20.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|.....+.+.|
T Consensus        47 D~G~Y~C~a~N~~G~~~~~~~l~V   70 (71)
T cd05731          47 DDGEYRCTASNSLGSARHTISVTV   70 (71)
T ss_pred             HCEEEEEEEEeCCceEEEEEEEEE
Confidence            479999999999999888887765

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin.

>cd05864 Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2)

Probab=97.36  E-value=0.00035  Score=39.55  Aligned_cols=24  Identities=25%  Similarity=0.350  Sum_probs=19.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|..+....+.+
T Consensus        45 D~G~YtC~a~N~~G~~~~~~t~~l   68 (70)
T cd05864          45 DAGNYTVVLTNPITKEEQRHTFQL   68 (70)
T ss_pred             HCEEEEEEEEECCCceeeEEEEEE
Confidence            479999999999998776655543

Ig2_VEGF-2: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-2 (KDR/Flk-1) is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF-A also interacts with VEGFR-1, which it binds more strongly than VEGFR-2. VEGFR-2 and -1 may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05763 Ig_1 Subgroup of the immunoglobulin (Ig) superfamily

Probab=97.30  E-value=0.00041  Score=39.76  Aligned_cols=24  Identities=29%  Similarity=0.439  Sum_probs=21.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|.....+.+.|
T Consensus        51 D~G~Y~C~A~N~~G~~~~~~~l~V   74 (75)
T cd05763          51 DTGVYSCTAQNTAGSISANATLTV   74 (75)
T ss_pred             cCEEEEEEEEcCCCEEEeeEEEEE
Confidence            579999999999999888887765

Ig_1: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05746 Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like domain of peroxidasin

Probab=97.28  E-value=0.00038  Score=39.23  Aligned_cols=22  Identities=27%  Similarity=0.542  Sum_probs=19.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQV   22 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~   22 (197)
                      +.|.|+|.|.|..|..+.++.|
T Consensus        47 D~G~Y~C~a~N~~G~~~~~~~L   68 (69)
T cd05746          47 DQGRYECVARNTIGYASVSMVL   68 (69)
T ss_pred             hCEEEEEEEECCCCcEEEEEEe
Confidence            4799999999999998877655

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self.

>PHA02785 IL-beta-binding protein; Provisional

Probab=97.25  E-value=0.0051  Score=45.92  Aligned_cols=102  Identities=11%  Similarity=0.054  Sum_probs=56.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC--CCC-E-EEEEeecCCeEEEEeeeC--C-CCCccccEEEEEEEeCC-CCcE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP--GVP-N-ILLQSTTTHSISILWKPS--Y-DGGAIITHYIVSYRDRT-EDWQ   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P--~~p-~-~~~~~~~~~~~~l~W~~~--~-~~~~~i~~y~v~~~~~~-~~~~   72 (197)
                      ++|.|+|+|.|..|....++.|.+....  ... . ............+.|...  . .++.+   -.+.|.... ....
T Consensus        93 DsG~Y~C~a~N~~g~~~~s~~L~V~~~~~~~~~~~~~~~~~~~g~~~~i~C~~~~~~~~~~~~---~~i~W~k~~~~~~~  169 (326)
T PHA02785         93 DSGIYICITKNETYCDMMSLNLTIVSVSESNIDLISYPQIVNERSTGEMVCPNINAFIASNVN---ADIIWSGHRRLRNK  169 (326)
T ss_pred             cCeEEEEEEECCCcceEEEEEEEEEecCCCccceeeccceecccCcEEEECCChhhcccCCCC---ceEEEccCCccCCc
Confidence            4799999999999987777777665432  111 1 101112334566777532  0 11111   124443211 1111


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .... .....+.|.++.......|.|.+.|..|.
T Consensus       170 r~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~  202 (326)
T PHA02785        170 RLKQ-RTPGIITIEDVRKNDAGYYTCVLKYIYGD  202 (326)
T ss_pred             ceEe-cCCCeEEEeecChhhCeEEEEEEEeccCC
Confidence            1111 12346888899888888999999887664

>cd05736 Ig2_Follistatin_like Second immunoglobulin (Ig)-like domain of a follistatin-like molecule encoded by the Mahya gene and similar proteins

Probab=97.17  E-value=0.00077  Score=38.69  Aligned_cols=25  Identities=32%  Similarity=0.476  Sum_probs=22.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL   25 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~   25 (197)
                      +.|.|+|.|.|..|..+..+.|.|.
T Consensus        50 D~G~Y~C~a~N~~G~~~~~~~l~V~   74 (76)
T cd05736          50 DTGAYTCIAKNEAGVDEDISSLFVE   74 (76)
T ss_pred             cCEEEEEEEEcCCCCcceEEEEEEE
Confidence            5799999999999999888888775

Ig2_Follistatin_like: domain similar to the second immunoglobulin (Ig)-like domain found in a follistatin-like molecule encoded by the CNS-related Mahya gene. Mahya genes have been retained in certain Bilaterian branches during evolution. They are conserved in Hymenoptera and Deuterostomes, but are absent from other metazoan species such as fruit fly and nematode. Mahya proteins are secretory, with a follistatin-like domain (Kazal-type serine/threonine protease inhibitor domain and EF-hand calcium-binding domain), two Ig-like domains, and a novel C-terminal domain. Mahya may be involved in learning and memory and in processing of sensory information in Hymenoptera and vertebrates. Follistatin is a secreted, multidomain protein that binds activins with high affinity and antagonizes their signaling.

>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R

Probab=97.15  E-value=0.013  Score=36.08  Aligned_cols=76  Identities=16%  Similarity=0.254  Sum_probs=53.2

Q ss_pred             CCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEEE--EeCCcccEEEECCC--CCCCEEEEEEEEEcC
Q psy9139          29 GVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSV--HVDAEYREFTLTQL--KCGTHYKINIKLVNS  103 (197)
Q Consensus        29 ~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~~--~~~~~~~~~~i~~L--~p~~~y~~~v~a~~~  103 (197)
                      .|.++.+... .-...|.|+++.... +-..|.++++ ...+.|..+  -.....+.+.++..  ++...|.+||+|..+
T Consensus        24 ~P~nv~~~s~-nf~~iL~W~~~~~~~-~~~~ytVq~~~~~~~~W~~v~~C~~i~~~~Cdlt~~~~~~~~~Y~~rV~A~~~  101 (107)
T PF01108_consen   24 APQNVTVDSV-NFKHILRWDPGPGSP-PNVTYTVQYKKYGSSSWKDVPGCQNITETSCDLTDETSDPSESYYARVRAEVG  101 (107)
T ss_dssp             SCEEEEEEEE-TTEEEEEEEESTTSS-STEEEEEEEEESSTSCEEEECCEEEESSSEEECTTCCTTTTSEEEEEEEEEET
T ss_pred             CCCeeEEEEE-CCceEEEeCCCCCCC-CCeEEEEEEEecCCcceeeccceecccccceeCcchhhcCcCCEEEEEEEEeC
Confidence            3333665544 455789999955333 3467999999 677889887  34455678888774  378899999999876


Q ss_pred             CcC
Q psy9139         104 IGE  106 (197)
Q Consensus       104 ~g~  106 (197)
                      ...
T Consensus       102 ~~~  104 (107)
T PF01108_consen  102 NQT  104 (107)
T ss_dssp             TEE
T ss_pred             Ccc
Confidence            543

...

>cd04976 Ig2_VEGFR Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR)

Probab=97.15  E-value=0.0008  Score=38.15  Aligned_cols=24  Identities=29%  Similarity=0.299  Sum_probs=19.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|.....+.+.+
T Consensus        46 D~G~YtC~a~N~~g~~~~~~~~~~   69 (71)
T cd04976          46 DAGNYTVVLTNKQAKLEKRLTFTL   69 (71)
T ss_pred             HCEEEEEEEEcCCccEEEEEEEEE
Confidence            479999999999998776665544

Ig2_VEGFR: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A. VEGFR-1 may play an inhibitory part in these processes by binding VEGF and interfering with its interaction with VEGFR-2. VEGFR-1 has a signa

>cd05726 Ig4_Robo Fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=97.14  E-value=0.00091  Score=39.84  Aligned_cols=27  Identities=22%  Similarity=0.229  Sum_probs=23.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSP   27 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~   27 (197)
                      ++|.|+|.|.|..|.....+.|.|...
T Consensus        58 D~G~Y~C~a~N~~G~~~~~~~l~V~~~   84 (90)
T cd05726          58 DVGYYICQTLNVAGSILTKAYLEVTDV   84 (90)
T ss_pred             hCEEEEEEEEcCCCceEEEEEEEEeec
Confidence            479999999999999988898888754

Ig4_Robo: domain similar to the fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>PHA02785 IL-beta-binding protein; Provisional

Probab=97.09  E-value=0.029  Score=42.00  Aligned_cols=104  Identities=13%  Similarity=0.140  Sum_probs=58.0

Q ss_pred             CCeeEEEEEEeCCCCcee----EEEEEecCCCCCCEE----EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC----
Q psy9139           1 MVGNYTCLADNIFGKDDI----YYQVTILSPPGVPNI----LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT----   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~----~~~~~~~~~P~~p~~----~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~----   68 (197)
                      +.|.|+|.|.|..|....    .+.+.+..+..+|.+    .........+.|.|.....+. +.. -.+.|...+    
T Consensus       188 d~G~Y~C~~~n~~g~~~~~~t~~v~l~V~~~~~pp~~~~p~~~~~~~G~~v~L~C~a~g~P~-~~~-~~v~W~kng~~i~  265 (326)
T PHA02785        188 DAGYYTCVLKYIYGDKTYNVTRIVKLEVRDRIIPPTMQLPEGVVTSIGSNLTIACRVSLRPP-TTD-ADVFWISNGMYYE  265 (326)
T ss_pred             hCeEEEEEEEeccCCEEEeEEEEEEEEEeccCCCceecCCCcEEecCCCcEEEEEEEECCCC-CCC-ceEEEEECCEECC
Confidence            579999999999886533    334555443334421    112233667889888743222 100 124444211    


Q ss_pred             -CC-c--EEEEe-C---------CcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          69 -ED-W--QSVHV-D---------AEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        69 -~~-~--~~~~~-~---------~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                       .. -  ..+.. .         .....++|.++.......|.|.|.|..|.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~V~~~D~G~Y~C~A~n~~~~  317 (326)
T PHA02785        266 EDDEDGDGRISVANKIYTTDKRRVITSRLNINPVKEEDATTFTCMAFTIPSI  317 (326)
T ss_pred             CcCCCCceeEEEecCccccccceeeeEEEEECCcchhcCeeeEEEEEeccCc
Confidence             00 0  01111 0         01245888999888889999999997743

>KOG4802|consensus

Probab=97.08  E-value=0.0039  Score=46.78  Aligned_cols=103  Identities=15%  Similarity=0.319  Sum_probs=57.9

Q ss_pred             EEEEEEeCCCCceeE---EEEEe-c--CCCCCCE-EEEEee--cCCe-EEEEeeeCCCCCccccEEEEEEEeC---CCCc
Q psy9139           5 YTCLADNIFGKDDIY---YQVTI-L--SPPGVPN-ILLQST--TTHS-ISILWKPSYDGGAIITHYIVSYRDR---TEDW   71 (197)
Q Consensus         5 y~c~a~n~~G~~~~~---~~~~~-~--~~P~~p~-~~~~~~--~~~~-~~l~W~~~~~~~~~i~~y~v~~~~~---~~~~   71 (197)
                      |.+.|.|..|...-+   -.... .  ..|.+|. +.+..+  .... ..|.|.|+ ..+.||..|.|.|...   ....
T Consensus       224 frvaavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~-~sdlPv~~Yki~Ws~~v~s~k~~  302 (516)
T KOG4802|consen  224 FRVAAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPS-KSDLPVEKYKITWSLYVNSAKAS  302 (516)
T ss_pred             EEEeeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCC-CCCCcceeeEEEeehhhhhhhhh
Confidence            556677887742211   11111 1  1233443 443333  3332 45566654 4467899999999721   1111


Q ss_pred             EEE--EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          72 QSV--HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        72 ~~~--~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      +..  ...-+..++.|++|.|+..|.+.|.|....|...
T Consensus       303 m~tks~~~k~thq~si~~L~Pns~Y~VevqAi~y~g~~r  341 (516)
T KOG4802|consen  303 MITKSSYVKDTHQFSIKELLPNSSYYVEVQAISYLGSRR  341 (516)
T ss_pred             cccccceeeccchhhhhhcCCCCeEEEEEEEEEeccCcc
Confidence            110  1112223455999999999999999998887654

>cd05739 Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=97.06  E-value=0.00093  Score=37.66  Aligned_cols=22  Identities=36%  Similarity=0.454  Sum_probs=18.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQV   22 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~   22 (197)
                      .+|+|+|.|.|..|...+++.+
T Consensus        47 d~G~Y~C~A~N~~G~~~~~a~l   68 (69)
T cd05739          47 ESANYTCVAISSLGMIEATAQV   68 (69)
T ss_pred             cCeeEEEEEEeCCCEEEEEEEE
Confidence            3699999999999987777654

Ig3_RPTP_IIa_LAR_like: domain similar to the third immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple IG-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Included in this group is Drosophila LAR (DLAR).

>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors

Probab=97.05  E-value=0.016  Score=35.43  Aligned_cols=80  Identities=19%  Similarity=0.417  Sum_probs=59.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC--CcccE-----EEE--CCCCCCCEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD--AEYRE-----FTL--TQLKCGTHYK   95 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~-----~~i--~~L~p~~~y~   95 (197)
                      .+|+.|. +.+.+.....++..|+++.+++.+. .|.+.|......|.....-  ...+.     +.+  .+..=++.|.
T Consensus         6 ~~p~~P~~~~C~S~~~etftC~W~~g~~~~l~~-~y~L~Y~~~~~~~~eCp~~~~~~~ns~~~~~C~F~~~~t~lf~~y~   84 (104)
T PF09067_consen    6 LPPEKPENLKCFSREMETFTCFWEPGSEGNLPT-NYTLFYKKEGEEWKECPDYSTSGPNSTVRHICYFPKSDTSLFVPYC   84 (104)
T ss_dssp             HHCCCCEEEEEEBSSSS-EEEEEEEESSSTSTC-EEEEEEEETTSEEEEESESSTTETTEEEEEEEEE-CCGCSSSSEEE
T ss_pred             cCCCCCccCccCCCCCCcEEEEeeCCCCCCCCC-cEEEEEEeCCCCCccCCCeEecCCCCceeEEEEcCCCCeEEEEEEE
Confidence            4678887 8899999999999999987666553 3999998665777776532  22333     444  4678899999


Q ss_pred             EEEEEEcCCcC
Q psy9139          96 INIKLVNSIGE  106 (197)
Q Consensus        96 ~~v~a~~~~g~  106 (197)
                      ++|.+.|..|.
T Consensus        85 i~V~a~~~~~~   95 (104)
T PF09067_consen   85 IQVEATNALGS   95 (104)
T ss_dssp             EEEEEEETTEE
T ss_pred             EEEEeccCCCc
Confidence            99999998874

The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=96.89  E-value=0.04  Score=40.29  Aligned_cols=27  Identities=30%  Similarity=0.400  Sum_probs=23.9

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +..+.++|.+|.|++.|.|.|.+.|..
T Consensus        12 g~~t~~t~~~L~p~t~YyfdVF~vn~~   38 (300)
T PF10179_consen   12 GQKTNQTLSGLKPDTTYYFDVFVVNQL   38 (300)
T ss_pred             CCCceEEeccCCCCCeEEEEEEEEECC
Confidence            456789999999999999999999874

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>cd05738 Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=96.85  E-value=0.0018  Score=37.02  Aligned_cols=24  Identities=25%  Similarity=0.425  Sum_probs=19.2

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~   24 (197)
                      ++|.|+|.|.|..|.. +..+.+.|
T Consensus        49 D~G~Y~C~a~N~~G~~~s~~a~l~v   73 (74)
T cd05738          49 DQGKYECVATNSAGTRYSAPANLYV   73 (74)
T ss_pred             hCEEEEEEEECCCCceEcccEEEEE
Confidence            5799999999999974 56666655

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains.

>KOG4194|consensus

Probab=96.73  E-value=0.027  Score=44.90  Aligned_cols=50  Identities=20%  Similarity=0.240  Sum_probs=37.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~   50 (197)
                      .+|.|+|.|.|..|+-++.+.+.|.+.|..-.  ....-.....+.+.|...
T Consensus       680 D~GiYtC~A~n~AG~isanAtL~V~e~p~f~~PL~~~~V~~get~vlqC~a~  731 (873)
T KOG4194|consen  680 DQGIYTCTAQNVAGQISANATLTVLETPSFSIPLEDQLVVVGETLVLQCLAE  731 (873)
T ss_pred             ccceeEEeeeccccceeeceEEEEecCCcccccccceEEEecceEEEEEecC
Confidence            37999999999999999999999998875433  222224456777888764

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=96.69  E-value=0.0039  Score=36.39  Aligned_cols=32  Identities=28%  Similarity=0.476  Sum_probs=27.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+.+.+|.|++.|.|+|+|.+..|.|..+.
T Consensus        56 ~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~   87 (93)
T cd00063          56 ETSYTLTGLKPGTEYEFRVRAVNGGGESPPSE   87 (93)
T ss_pred             ccEEEEccccCCCEEEEEEEEECCCccCCCcc
Confidence            56799999999999999999999888776443

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>cd05760 Ig2_PTK7 Second immunoglobulin (Ig)-like domain of protein tyrosine kinase (PTK) 7, also known as CCK4

Probab=96.67  E-value=0.0025  Score=36.72  Aligned_cols=24  Identities=33%  Similarity=0.528  Sum_probs=18.0

Q ss_pred             CCeeEEEEEEeCCCCce--eEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDD--IYYQVTI   24 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~--~~~~~~~   24 (197)
                      ++|.|+|.|.|..|+..  ..+.+.+
T Consensus        49 D~G~Y~C~a~N~~G~~~s~~~~~l~v   74 (77)
T cd05760          49 DSGLYYCCAHNAFGSVCSSQNFTLSI   74 (77)
T ss_pred             cCEEEEEEEEeCCCeEeeCceEEEEE
Confidence            57999999999999753  3444444

Ig2_PTK7: domain similar to the second immunoglobulin (Ig)-like domain in protein tyrosine kinase (PTK) 7, also known as CCK4. PTK7 is a subfamily of the receptor protein tyrosine kinase family, and is referred to as an RPTK-like molecule. RPTKs transduce extracellular signals across the cell membrane, and play important roles in regulating cell proliferation, migration, and differentiation. PTK7 is organized as an extracellular portion having seven Ig-like domains, a single transmembrane region, and a cytoplasmic tyrosine kinase-like domain. PTK7 is considered a pseudokinase as it has several unusual residues in some of the highly conserved tyrosine kinase (TK) motifs; it is predicted to lack TK activity. PTK7 may function as a cell-adhesion molecule. PTK7 mRNA is expressed at high levels in placenta, melanocytes, liver, lung, pancreas, and kidney. PTK7 is overexpressed in s

>cd05771 IgC_Tapasin_R Tapasin-R immunoglobulin-like domain

Probab=96.63  E-value=0.013  Score=37.96  Aligned_cols=50  Identities=18%  Similarity=0.264  Sum_probs=34.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EE-EEeecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-IL-LQSTTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~-~~~~~~~~~~l~W~~~   50 (197)
                      +.|.|.|.+.|..|.....+.|.+..+|.... .. ........+.|.|...
T Consensus        12 D~G~Y~C~~~~~~~~~~~~~~l~v~~~P~v~~~~~~~~~~~~~~~~L~C~a~   63 (139)
T cd05771          12 DEGTYICSVSTPPHQAQQIIQLSVSEPPRVRLSLEKLVSMIEEPQTLICHIA   63 (139)
T ss_pred             HCEEEEEEEEccCcceeeEEEEEEecCCceEEeCCCceeecCCcEEEEEEEC
Confidence            37999999999989888888999987775432 11 1111345677888764

IgC_Tapasin_R: Immunoglobulin-like domain on Tapasin-R. Tapasin is a V-C1 (variable-constant) immunoglobulin superfamily molecule present in the endoplasmic reticulum (ER), where it links MHC class I molecules to the transporter associated with antigen processing (TAP). Tapasin-R is a tapasin-related protein that contains similar structural motifs to Tapasin, with some marked differences, especially in the V domain, transmembrane and cytoplasmic regions. The majority of Tapasin-R is located within the ER; however, there may be some expression of Tapasin-R at the cell surface. Tapasin-R lacks an obvious ER retention signal.

>smart00060 FN3 Fibronectin type 3 domain

Probab=96.60  E-value=0.0046  Score=35.01  Aligned_cols=26  Identities=35%  Similarity=0.586  Sum_probs=23.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         139 MPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       139 ~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                      ..+.+.+|.|++.|.|+|+|.+..|.
T Consensus        57 ~~~~i~~L~~~~~Y~v~v~a~~~~g~   82 (83)
T smart00060       57 TSYTLTGLKPGTEYEFRVRAVNGAGE   82 (83)
T ss_pred             cEEEEeCcCCCCEEEEEEEEEcccCC
Confidence            47999999999999999999987664

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>cd05743 Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2

Probab=96.23  E-value=0.0049  Score=35.53  Aligned_cols=21  Identities=33%  Similarity=0.157  Sum_probs=16.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQ   21 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~   21 (197)
                      +.|.|+|.|.|..|.......
T Consensus        53 D~G~Y~C~a~N~~G~~~~~~~   73 (78)
T cd05743          53 DQGAYTCEAINTRGMVFGIPD   73 (78)
T ss_pred             HCEEEEEEEEecCCEEEeccc
Confidence            479999999999997655443

Ig_Perlecan_D2_like: the immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2. Perlecan consists of five domains. Domain I has three putative heparan sulfate attachment sites; domain II has four LDL receptor-like repeats, and one Ig-like repeat; domain III resembles the short arm of laminin chains; domain IV has multiple Ig-like repeats (21 repeats in human perlecan); and domain V resembles the globular G domain of the laminin A chain and internal repeats of EGF. Perlecan may participate in a variety of biological functions including cell binding, LDL-metabolism, basement membrane assembly and selective permeability, calcium binding, and growth- and neurite-promoting activities.

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=95.57  E-value=0.068  Score=29.53  Aligned_cols=38  Identities=26%  Similarity=0.551  Sum_probs=25.4

Q ss_pred             CCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         123 TDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       123 ~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      .+|......      ...+.+.+|.|| .|.|.|+|.+..|....
T Consensus        19 ~~W~~~~~~------~~~~~~~~L~~G-~Y~l~V~a~~~~~~~~~   56 (66)
T PF07495_consen   19 DEWITLGSY------SNSISYTNLPPG-KYTLEVRAKDNNGKWSS   56 (66)
T ss_dssp             SSEEEESST------S-EEEEES--SE-EEEEEEEEEETTS-B-S
T ss_pred             CeEEECCCC------cEEEEEEeCCCE-EEEEEEEEECCCCCcCc
Confidence            446655543      227899999999 99999999998876553

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>cd05762 Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK)

Probab=95.48  E-value=0.28  Score=29.60  Aligned_cols=79  Identities=9%  Similarity=0.061  Sum_probs=45.4

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                      .....+.|.+...-.+...+.||+-...........+........++|.+........|.|.+.|..|....+..+.+.
T Consensus        13 ~~G~~v~l~C~~~G~p~p~v~W~kdg~~l~~~~~~~~~~~~~~s~L~I~~~~~~D~G~Ytc~a~N~~G~~~~~~~l~V~   91 (98)
T cd05762          13 RAGESVELFCKVTGTQPITCTWMKFRKQIQEGEGIKIENTENSSKLTITEGQQEHCGCYTLEVENKLGSRQAQVNLTVV   91 (98)
T ss_pred             ECCCEEEEEEEEcccCCCceEEEECCEEecCCCcEEEEecCCeeEEEECCCChhhCEEEEEEEEcCCCceeEEEEEEEe
Confidence            4456677777653222222333221111111212222333445678999999999999999999999986655444443

Ig8_MLCK: the eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). MLCK is a key regulator of different forms of cell motility involving actin and myosin II. Agonist stimulation of smooth muscle cells increases cytosolic Ca2+, which binds calmodulin. This Ca2+-calmodulin complex in turn binds to and activates MLCK. Activated MLCK leads to the phosphorylation of the 20 kDa myosin regulatory light chain (RLC) of myosin II and the stimulation of actin-activated myosin MgATPase activity. MLCK is widely present in vertebrate tissues; it phosphorylates the 20 kDa RLC of both smooth and nonmuscle myosin II. Phosphorylation leads to the activation of the myosin motor domain and altered structural properties of myosin II. In smooth muscle MLCK it is involved in initiating contraction. In nonmuscle cells, MLCK may participate in cell division and cell motility; it has

>cd05748 Ig_Titin_like Immunoglobulin (Ig)-like domain of titin and similar proteins

Probab=95.14  E-value=0.24  Score=27.93  Aligned_cols=32  Identities=19%  Similarity=0.234  Sum_probs=26.6

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ......+.|.++.+.....|.|.|.|..|...
T Consensus        36 ~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   67 (74)
T cd05748          36 TASSTSLVIKNAERSDSGKYTLTLKNPAGEKS   67 (74)
T ss_pred             CCCeEEEEECCCCcCcCEEEEEEEECCCccEE
Confidence            34456789999999999999999999988643

Ig_Titin_like: immunoglobulin (Ig)-like domain found in titin-like proteins. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic, depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone. It appears to function similarly to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching. Within the sarcomere, titin is also attached to or is associated with myosin binding protein C (MyBP-C). MyBP-C appears to contribute to the generation of passive tension by titin, and similar to titin has repeated Ig-like and FN-

>cd05743 Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2

Probab=95.03  E-value=0.33  Score=27.77  Aligned_cols=30  Identities=17%  Similarity=0.203  Sum_probs=25.2

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ....+.|.++.......|.|.|.|..|...
T Consensus        40 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   69 (78)
T cd05743          40 GYGTLTIRDVKESDQGAYTCEAINTRGMVF   69 (78)
T ss_pred             CEEEEEECCCChHHCEEEEEEEEecCCEEE
Confidence            345689999999999999999999998643

Ig_Perlecan_D2_like: the immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2. Perlecan consists of five domains. Domain I has three putative heparan sulfate attachment sites; domain II has four LDL receptor-like repeats, and one Ig-like repeat; domain III resembles the short arm of laminin chains; domain IV has multiple Ig-like repeats (21 repeats in human perlecan); and domain V resembles the globular G domain of the laminin A chain and internal repeats of EGF. Perlecan may participate in a variety of biological functions including cell binding, LDL-metabolism, basement membrane assembly and selective permeability, calcium binding, and growth- and neurite-promoting activities.

>KOG4258|consensus

Probab=94.88  E-value=0.12  Score=42.88  Aligned_cols=74  Identities=19%  Similarity=0.343  Sum_probs=54.4

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEe---CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHV---DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ..+++.|.|.+|.++++-|..|.|.++. ..+.......   ........+..|.|| .|..+|+|..-.|.+.+....
T Consensus       841 ~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~~k~~gv~l~~l~~G-~y~~~vratSlaGng~~t~~~  918 (1025)
T KOG4258|consen  841 EMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMDYAKAGGVYLKRLNPG-NYSVRVRATSLAGNGSWTESV  918 (1025)
T ss_pred             CcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhhhhhcCceEEEecCCC-cEEEEEEEEeeccCCCCcCCc
Confidence            7889999999999888889999999983 3332221110   122334677889898 799999999999988876543

>cd05854 Ig6_Contactin-2 Sixth Ig domain of contactin-2

Probab=94.79  E-value=0.33  Score=28.43  Aligned_cols=38  Identities=5%  Similarity=0.074  Sum_probs=30.0

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                      ....++|.++++.....|.|.|.|..|....+..+.+.
T Consensus        45 ~~~~L~I~~v~~~D~G~YtC~A~n~~g~~~~~~~L~V~   82 (85)
T cd05854          45 TIGDLVIVNAQLSHAGTYTCTAQTVVDSASASATLVVR   82 (85)
T ss_pred             eEeEEEEccCChhhCeEEEEEEecCCCCEEEEEEEEEE
Confidence            34578999999999999999999999876555444443

Ig6_Contactin-2: Sixth Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=94.75  E-value=1.2  Score=32.93  Aligned_cols=26  Identities=23%  Similarity=0.429  Sum_probs=21.4

Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy9139         140 PLVIENLLPATRYELTISAKNDAGST  165 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G~~  165 (197)
                      ..+|.+|+||+.|.|.|.+.-..|.+
T Consensus       261 tetI~~L~PG~~Yl~dV~~~~~~G~s  286 (300)
T PF10179_consen  261 TETIKGLKPGTTYLFDVYVNGPSGQS  286 (300)
T ss_pred             eeecccCCCCcEEEEEEEEecCCCce
Confidence            46799999999999999998665554

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>cd05737 Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein

Probab=94.63  E-value=0.5  Score=28.00  Aligned_cols=29  Identities=21%  Similarity=0.293  Sum_probs=25.0

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.+.....|.|.|.|..|...
T Consensus        57 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   85 (92)
T cd05737          57 YASLTIKGVSSEDSGKYGIVVKNKYGGET   85 (92)
T ss_pred             EEEEEEccCChhhCEEEEEEEEECCCcce
Confidence            45689999999999999999999988654

Ig_Myomesin_like_C: domain similar to the C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein. Myomesin and M-protein are both structural proteins localized to the M-band, a transverse structure in the center of the sarcomere, and are candidates for M-band bridges. Both proteins are modular, consisting mainly of repetitive Ig-like and fibronectin type III (FnIII) domains. Myomesin is expressed in all types of vertebrate striated muscle; M-protein has a muscle-type specific expression pattern. Myomesin is present in both slow and fast fibers; M-protein is present only in fast fibers. It has been suggested that myomesin acts as a molecular spring with alternative splicing as a means of modifying its elasticity.

>cd05851 Ig3_Contactin-1 Third Ig domain of contactin-1

Probab=94.35  E-value=0.42  Score=28.13  Aligned_cols=69  Identities=6%  Similarity=-0.024  Sum_probs=40.3

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      .....+.|.|...-.+...+.||+.... .... ..  .......+.|.++.+.....|.|.|.|..|....+
T Consensus        14 ~~G~~v~l~C~~~G~P~P~v~W~k~~~~-~~~~-~~--~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~   82 (88)
T cd05851          14 LKGQNVTLECFALGNPVPVIRWRKILEP-MPAT-AE--ISMSGAVLKIFNIQPEDEGTYECEAENIKGKDKHQ   82 (88)
T ss_pred             eCCCcEEEEEEecccCCCEEEEEECCcC-CCCC-CE--EecCCCEEEECcCChhhCEEEEEEEEcCCCceEEE
Confidence            3466788888764322222333221110 0011 11  12234578999999999999999999999876443

Ig3_Contactin-1: Third Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd04972 Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=94.28  E-value=0.47  Score=27.97  Aligned_cols=31  Identities=13%  Similarity=0.309  Sum_probs=25.6

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ....+.|.++.+.....|.|.|.|..|....
T Consensus        54 ~~~~L~I~~v~~~D~g~Y~C~A~N~~G~~~~   84 (90)
T cd04972          54 DIYNLQLSNITSETQTTVTCTAENPVGQANV   84 (90)
T ss_pred             CEEEEEEecCCcccCEEEEEEEECCCCceeE
Confidence            3456889999999899999999999987543

TrkABC_d4: the fourth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor fo

>cd05893 Ig_Palladin_C C-terminal immunoglobulin (Ig)-like domain of palladin

Probab=94.22  E-value=0.18  Score=28.74  Aligned_cols=29  Identities=7%  Similarity=-0.098  Sum_probs=25.0

Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      .+.|.++.+.....|.|.|.|..|....+
T Consensus        42 ~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~   70 (75)
T cd05893          42 CLLIQGATKEDAGWYTVSAKNEAGIVSCT   70 (75)
T ss_pred             EEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence            58899999999999999999999875443

Ig_Palladin_C: C-terminal immunoglobulin (Ig)-like domain of palladin. Palladin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to this family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Palladin binds to alpha-actinin ezrin, vasodilator-stimulated phosphoprotein VASP, SPIN90 (DIP, mDia interacting protein), and Src. Palladin also binds F-actin directly, via its Ig3 domain. Palladin is expressed as several alternatively spliced isoforms, having various combinations of Ig-like domains, in a cell-type-specific manner. It has been suggested that palladin's different Ig-like domains may be specialized for distinct functions.

>PLN02533 probable purple acid phosphatase

Probab=94.18  E-value=1.3  Score=34.68  Aligned_cols=83  Identities=14%  Similarity=0.134  Sum_probs=47.0

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEE------------EeCCcccEEEECCCCCCC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSV------------HVDAEYREFTLTQLKCGT   92 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~------------~~~~~~~~~~i~~L~p~~   92 (197)
                      .|..|. +++.-...+++.|+|.-.... .+    .|+|... .......            ..+.......|++|+|++
T Consensus        40 ~~~~P~qvhls~~~~~~m~V~W~T~~~~-~~----~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T  114 (427)
T PLN02533         40 DPTHPDQVHISLVGPDKMRISWITQDSI-PP----SVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNT  114 (427)
T ss_pred             CCCCCceEEEEEcCCCeEEEEEECCCCC-CC----EEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCC
Confidence            445565 666555688999999875432 22    2444311 1111110            012234567899999999


Q ss_pred             EEEEEEEEEcCCcCCCCCCceEeecCCC
Q psy9139          93 HYKINIKLVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      .|.|+|-.      ...+....++|.+.
T Consensus       115 ~Y~Yrvg~------~~~s~~~~F~T~p~  136 (427)
T PLN02533        115 VYYYKCGG------PSSTQEFSFRTPPS  136 (427)
T ss_pred             EEEEEECC------CCCccceEEECCCC
Confidence            99999842      12244556666544

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=94.16  E-value=0.27  Score=27.10  Aligned_cols=41  Identities=15%  Similarity=0.379  Sum_probs=27.0

Q ss_pred             eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          66 DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..++.|....  .....+.+.+|.|| .|.+.|+|.+..|....
T Consensus        16 g~d~~W~~~~--~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~~~   56 (66)
T PF07495_consen   16 GFDDEWITLG--SYSNSISYTNLPPG-KYTLEVRAKDNNGKWSS   56 (66)
T ss_dssp             TTESSEEEES--STS-EEEEES--SE-EEEEEEEEEETTS-B-S
T ss_pred             CCCCeEEECC--CCcEEEEEEeCCCE-EEEEEEEEECCCCCcCc
Confidence            4567787644  22228899999999 79999999998876543

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>cd05861 Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b)

Probab=94.11  E-value=0.11  Score=30.29  Aligned_cols=14  Identities=29%  Similarity=0.472  Sum_probs=12.5

Q ss_pred             CCeeEEEEEEeCCC
Q psy9139           1 MVGNYTCLADNIFG   14 (197)
Q Consensus         1 ~~g~y~c~a~n~~G   14 (197)
                      ++|.|+|.|.|..+
T Consensus        57 DsG~Y~C~a~n~~~   70 (84)
T cd05861          57 DSGTYECAAHESTQ   70 (84)
T ss_pred             CCEEEEEEEEECcc
Confidence            58999999999876

Ig1_PDGFR-alphabeta: The first immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b). PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFRalpha binds to all three PDGFs, whereas the PDGFRbeta binds only to PDGF-B. PDGFRs alpha and beta have similar organization: an extracellular component with five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFRalpha and PDGFRbeta are essential for normal development.

>cd05740 Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=94.00  E-value=0.73  Score=27.37  Aligned_cols=65  Identities=6%  Similarity=0.050  Sum_probs=39.4

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ....+.|.|..... ...+.||+-........   ..+......+.|.++.......|.|.|.|..|..
T Consensus        17 ~g~~v~l~C~a~g~-~p~i~W~kng~~l~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   81 (91)
T cd05740          17 DNQPVTLTCEAEGQ-ATYIWWVNNGSLLVPPR---LQLSNDNRTLTFNNVTRSDTGHYQCEASNEVSNM   81 (91)
T ss_pred             cCCcEEEEEEeCCC-CCEEEEEECCEECCCCC---EEEeCCCCEEEECcCChhhCEEEEEEEEcCCCCE
Confidence            35677888876432 22233322111111111   2233444579999999999999999999999864

Ig_CEACAM_D4: immunoglobulin (Ig)-like domain 4 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the

>cd05857 Ig2_FGFR Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor

Probab=94.00  E-value=0.66  Score=26.84  Aligned_cols=29  Identities=7%  Similarity=0.020  Sum_probs=23.9

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.+.....|.|.+.|..|...
T Consensus        50 ~~~l~i~~~~~~D~G~Y~C~a~N~~G~~~   78 (85)
T cd05857          50 HWSLIMESVVPSDKGNYTCVVENEYGSIN   78 (85)
T ss_pred             ceEEEEccCCcccCEEEEEEEEeCCCEEE
Confidence            34578888999889999999999998644

Ig2_FGFR: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three IG-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans.

>cd05852 Ig5_Contactin-1 Fifth Ig domain of contactin-1

Probab=93.98  E-value=0.51  Score=26.69  Aligned_cols=30  Identities=7%  Similarity=0.021  Sum_probs=25.7

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ..+.|.++.+.....|.|.|.|..|....+
T Consensus        39 g~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~   68 (73)
T cd05852          39 GSLEILNITKLDEGSYTCFAENNRGKANST   68 (73)
T ss_pred             CEEEECcCChhHCEEEEEEEECCCCceeEE
Confidence            468999999999999999999999876543

Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05892 Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like domain of myotilin

Probab=93.95  E-value=0.32  Score=27.77  Aligned_cols=29  Identities=10%  Similarity=0.046  Sum_probs=25.0

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++.+.....|.|.|.|..|....
T Consensus        41 ~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~   69 (75)
T cd05892          41 VTLLIKNVNKKDAGWYTVSAVNEAGVATC   69 (75)
T ss_pred             EEEEECCCChhhCEEEEEEEEcCcCeEEE
Confidence            36899999999999999999999986543

Ig_Myotilin_C: C-terminal immunoglobulin (Ig)-like domain of myotilin. Mytolin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to the latter family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Myotilin is most abundant in skeletal and cardiac muscle, and is involved in maintaining sarcomere integrity. It binds to alpha-actinin, filamin and actin. Mutations in myotilin lead to muscle disorders.

>cd05730 Ig3_NCAM-1_like Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=93.68  E-value=0.81  Score=27.19  Aligned_cols=32  Identities=16%  Similarity=0.125  Sum_probs=26.6

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ....++|.++.......|.|.|.|..|....+
T Consensus        56 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~   87 (95)
T cd05730          56 DGSEMTILDVDKLDEAEYTCIAENKAGEQEAE   87 (95)
T ss_pred             CCCEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence            34568999999999999999999999875443

Ig3_NCAM-1_like: domain similar to the third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1,and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the

>cd05894 Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)

Probab=93.50  E-value=0.88  Score=26.65  Aligned_cols=31  Identities=16%  Similarity=0.292  Sum_probs=26.4

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....+.|.++.+.....|.|.|.|..|...
T Consensus        49 ~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~~   79 (86)
T cd05894          49 KDLSSFVIEGAEREDEGVYTITVTNPVGEDH   79 (86)
T ss_pred             CCeEEEEECCCccCcCEEEEEEEEeCCCcEE
Confidence            3456799999999999999999999998643

Ig_C5_MyBP_C : the C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C). MyBP_C consists of repeated domains, Ig and fibronectin type 3, and various linkers. Three isoforms of MYBP_C exist and are included in this group: cardiac(c), and fast and slow skeletal muscle (s) MyBP_C. cMYBP_C has insertions between and inside domains and an additional cardiac-specific Ig domain at the N-terminus. For cMYBP_C an interaction has been demonstrated between this C5 domain and the Ig C8 domain.

>KOG4258|consensus

Probab=93.46  E-value=0.22  Score=41.46  Aligned_cols=41  Identities=29%  Similarity=0.593  Sum_probs=32.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD   66 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~   66 (197)
                      ..|.+|. ....+.+++.+.|.|.+|..+++.++.|.+.|+.
T Consensus       609 ~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer  650 (1025)
T KOG4258|consen  609 DIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWER  650 (1025)
T ss_pred             CCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEe
Confidence            5567775 4445556668999999999999999999999983

>cd05870 Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)

Probab=93.31  E-value=1  Score=26.97  Aligned_cols=30  Identities=10%  Similarity=0.190  Sum_probs=26.0

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.+.....|.|.|.|..|....
T Consensus        63 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~   92 (98)
T cd05870          63 ESSLHIKDVKLSDSGRYDCEAASRIGGHQK   92 (98)
T ss_pred             eeEEEEeeCCcCCCEEEEEEEeccCCccee
Confidence            357899999999999999999999997554

Ig5_NCAM-2: the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd05744 Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain of myotilin, palladin, and myopalladin

Probab=93.27  E-value=0.71  Score=26.18  Aligned_cols=28  Identities=11%  Similarity=-0.013  Sum_probs=24.5

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ..+.|.++.+.....|.|.|.|..|...
T Consensus        41 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   68 (75)
T cd05744          41 ICLLIQNANKEDAGWYTVSAVNEAGVVS   68 (75)
T ss_pred             EEEEECCCCcccCEEEEEEEEcCCCcEE
Confidence            4689999999999999999999998654

Ig_Myotilin_like_C: immunoglobulin (Ig)-like domain in myotilin, palladin, and myopalladin. Myotilin, palladin, and myopalladin function as scaffolds that regulate actin organization. Myotilin and myopalladin are most abundant in skeletal and cardiac muscle; palladin is ubiquitously expressed in the organs of developing vertebrates and plays a key role in cellular morphogenesis. The three family members each interact with specific molecular partners: all three bind to alpha-actinin; in addition, palladin also binds to vasodilator-stimulated phosphoprotein (VASP) and ezrin, myotilin binds to filamin and actin, and myopalladin also binds to nebulin and cardiac ankyrin repeat protein (CARP).

>cd05891 Ig_M-protein_C C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2)

Probab=93.26  E-value=1  Score=26.72  Aligned_cols=29  Identities=17%  Similarity=0.218  Sum_probs=24.9

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++++.....|.|.+.|..|....
T Consensus        58 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~   86 (92)
T cd05891          58 ASLTIKGVTSEDSGKYSINVKNKYGGETV   86 (92)
T ss_pred             EEEEECCCChhhCEEEEEEEEeCCCceee
Confidence            46889999999999999999999887654

Ig_M-protein_C: the C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2). M-protein is a structural protein localized to the M-band, a transverse structure in the center of the sarcomere, and is a candidate for M-band bridges. M-protein is modular consisting mainly of repetitive IG-like and fibronectin type III (FnIII) domains, and has a muscle-type specific expression pattern. M-protein is present in fast fibers.

>cd05858 Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor 2 (FGFR2)

Probab=93.19  E-value=1  Score=26.51  Aligned_cols=32  Identities=22%  Similarity=0.063  Sum_probs=27.1

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~  112 (197)
                      ..+.|.++.......|.|.|.|..|....+..
T Consensus        55 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~a~   86 (90)
T cd05858          55 EVLYLRNVTFEDAGEYTCLAGNSIGISHHSAW   86 (90)
T ss_pred             eEEEEccCCHHHCEEEEEEEEeCCCcccceEE
Confidence            57999999999999999999999997655433

Ig3_FGFR-2-like; domain similar to the third immunoglobulin (Ig)-like domain of human fibroblast growth factor receptor 2 (FGFR2). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs. FGFR2 is required for male sex determination.

>cd05732 Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM) and similar proteins

Probab=92.92  E-value=1.2  Score=26.47  Aligned_cols=30  Identities=17%  Similarity=0.242  Sum_probs=25.7

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        61 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~   90 (96)
T cd05732          61 VSSLTLKDVQLTDAGRYDCEASNRIGGDQQ   90 (96)
T ss_pred             EEEEEECcCCcCcCEEeEEEEEeCCCCcEE
Confidence            457899999999999999999999987643

Ig5_NCAM-1 like: domain similar to the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM mole

>cd05866 Ig1_NCAM-2 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2

Probab=92.90  E-value=1.2  Score=26.54  Aligned_cols=30  Identities=7%  Similarity=0.043  Sum_probs=25.6

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .....++|.++.......|+|.|.|..|..
T Consensus        53 g~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~   82 (92)
T cd05866          53 GVRSRLTIYNANIEDAGIYRCQATDAKGQT   82 (92)
T ss_pred             CCeeEEEEecCChHHCEEEEEEEEcCCCcE
Confidence            334578999999999999999999998864

Ig1_NCAM-2: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2 (OCAM/mamFas II, RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd07702 Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1)

Probab=92.84  E-value=0.21  Score=28.30  Aligned_cols=15  Identities=27%  Similarity=0.053  Sum_probs=12.3

Q ss_pred             CCeeEEEEEEeCCCC
Q psy9139           1 MVGNYTCLADNIFGK   15 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~   15 (197)
                      ++|.|+|.|.|..+.
T Consensus        47 D~G~YtC~a~~~~~~   61 (72)
T cd07702          47 DAGIYTILLGIKQYN   61 (72)
T ss_pred             HCEEEEEEEEccccc
Confidence            379999999998553

Ig2_VEGFR-1: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1). VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-1 binds VEGF-A strongly; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-1 may play an inhibitory rolet in the function of VEGFR-2 by binding VEGF-A and interfering with its interaction with VEGFR-2. VEGFR-1 has a signaling role in mediating monocyte chemotaxis and may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05745 Ig3_Peroxidasin Third immunoglobulin (Ig)-like domain of peroxidasin

Probab=92.70  E-value=0.66  Score=26.13  Aligned_cols=29  Identities=10%  Similarity=0.248  Sum_probs=24.9

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++.+.....|.|.|.|..|....
T Consensus        40 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~   68 (74)
T cd05745          40 GTLRISRVALHDQGQYECQAVNIVGSQRT   68 (74)
T ss_pred             CeEEEeeCCHHhCEEEEEEEEeCCCceeE
Confidence            46899999999999999999999987543

Ig3_Peroxidasin: the third immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells which have undergone programmed cell death, and protection of the organism against non-self.

>cd05763 Ig_1 Subgroup of the immunoglobulin (Ig) superfamily

Probab=92.66  E-value=0.55  Score=26.52  Aligned_cols=29  Identities=14%  Similarity=0.115  Sum_probs=24.3

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++.+.....|.|.|.|..|....
T Consensus        40 ~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~   68 (75)
T cd05763          40 DVFFIVDVKIEDTGVYSCTAQNTAGSISA   68 (75)
T ss_pred             CEEEEeeCCcccCEEEEEEEEcCCCEEEe
Confidence            46788999999999999999999886433

Ig_1: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05747 Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins

Probab=92.60  E-value=1.3  Score=26.17  Aligned_cols=71  Identities=8%  Similarity=0.061  Sum_probs=40.7

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....+.|.|.....+...+.||+-...........+........+.|.++.......|.|.+.|..|...
T Consensus        16 ~~G~~~~L~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~   86 (92)
T cd05747          16 SEGESARFSCDVDGEPAPTVTWMREGQIIVSSQRHQITSTEYKSTFEISKVQMSDEGNYTVVVENSEGKQE   86 (92)
T ss_pred             eCCCcEEEEEEEeecCCCEEEEEECCEECCCCCcEEEEEcCCeeEEEECCCCcccCEeEEEEEEcCCCCEe
Confidence            44566778876543222223333211111111112222233346789999999999999999999988643

Ig5_Titin_like: domain similar to the M5, fifth immunoglobulin (Ig)-like domain from the human titin C terminus. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic; depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone, and appears to function similar to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching.

>cd05760 Ig2_PTK7 Second immunoglobulin (Ig)-like domain of protein tyrosine kinase (PTK) 7, also known as CCK4

Probab=92.47  E-value=1.2  Score=25.38  Aligned_cols=29  Identities=17%  Similarity=-0.015  Sum_probs=24.9

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.+.....|.|.|.|..|...
T Consensus        37 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   65 (77)
T cd05760          37 ERTLTLRSAGPDDSGLYYCCAHNAFGSVC   65 (77)
T ss_pred             CCEEEEeeCCcccCEEEEEEEEeCCCeEe
Confidence            34788999999999999999999998643

Ig2_PTK7: domain similar to the second immunoglobulin (Ig)-like domain in protein tyrosine kinase (PTK) 7, also known as CCK4. PTK7 is a subfamily of the receptor protein tyrosine kinase family, and is referred to as an RPTK-like molecule. RPTKs transduce extracellular signals across the cell membrane, and play important roles in regulating cell proliferation, migration, and differentiation. PTK7 is organized as an extracellular portion having seven Ig-like domains, a single transmembrane region, and a cytoplasmic tyrosine kinase-like domain. PTK7 is considered a pseudokinase as it has several unusual residues in some of the highly conserved tyrosine kinase (TK) motifs; it is predicted to lack TK activity. PTK7 may function as a cell-adhesion molecule. PTK7 mRNA is expressed at high levels in placenta, melanocytes, liver, lung, pancreas, and kidney. PTK7 is overexpressed in s

>cd05736 Ig2_Follistatin_like Second immunoglobulin (Ig)-like domain of a follistatin-like molecule encoded by the Mahya gene and similar proteins

Probab=92.34  E-value=1.2  Score=25.14  Aligned_cols=34  Identities=9%  Similarity=0.098  Sum_probs=27.1

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ...+.|.++.......|.|.+.|..|.......+
T Consensus        38 ~~~l~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l   71 (76)
T cd05736          38 GSELHISNVRYEDTGAYTCIAKNEAGVDEDISSL   71 (76)
T ss_pred             CCEEEECcCCcccCEEEEEEEEcCCCCcceEEEE
Confidence            3468889999999999999999999876644333

Ig2_Follistatin_like: domain similar to the second immunoglobulin (Ig)-like domain found in a follistatin-like molecule encoded by the CNS-related Mahya gene. Mahya genes have been retained in certain Bilaterian branches during evolution. They are conserved in Hymenoptera and Deuterostomes, but are absent from other metazoan species such as fruit fly and nematode. Mahya proteins are secretory, with a follistatin-like domain (Kazal-type serine/threonine protease inhibitor domain and EF-hand calcium-binding domain), two Ig-like domains, and a novel C-terminal domain. Mahya may be involved in learning and memory and in processing of sensory information in Hymenoptera and vertebrates. Follistatin is a secreted, multidomain protein that binds activins with high affinity and antagonizes their signaling.

>cd05765 Ig_3 Subgroup of the immunoglobulin (Ig) superfamily

Probab=92.30  E-value=1  Score=25.62  Aligned_cols=28  Identities=11%  Similarity=-0.056  Sum_probs=24.6

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ..+.|.++.+.....|.|.|.|..|...
T Consensus        47 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   74 (81)
T cd05765          47 GQLVIYNAQPQDAGLYTCTARNSGGLLR   74 (81)
T ss_pred             cEEEEccCCcccCEEEEEEEecCCceEE
Confidence            5689999999999999999999998643

Ig_3: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05751 Ig1_LILRB1_like First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins

Probab=91.90  E-value=1.6  Score=25.77  Aligned_cols=73  Identities=11%  Similarity=0.052  Sum_probs=43.8

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC-CcCCCCCCceEe
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS-IGESKPSKTIAA  115 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~-~g~~~~s~~~~~  115 (197)
                      ....++|.|....    +...|.+........+...........+.|..+.+.....|+|+..+. .+.+..|..+.+
T Consensus        15 ~G~~VtL~C~~~~----~~~~f~l~k~g~~~~~~~~~~~~~~~~f~i~~v~~~~~G~Y~C~~~~~~~~~S~~Sd~lel   88 (91)
T cd05751          15 LGKPVTLRCQGPY----GAVEYRLYREGSTFAVKKPPEPQNKAKFFIPSMKREHAGRYRCYYRSGVALWSEPSDPLEL   88 (91)
T ss_pred             CCCcEEEEEecCC----CCCEEEEEECCCCccccccCCCceeEEEEccCCChhHCEEEEEEEECCCCccCCCCCcEEE
Confidence            4678889887642    234454433211111221112334556899999999899999999886 455666665543

Ig1_LILRB1_like: domain similar to the first immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1). This group includes, LILRA5 (LIR9), an activating natural cytotoxicity receptor NKp46, and the immune-type receptor glycoprotein VI (GPVI). LILRs are a family of immunoreceptors expressed on expressed on T and B cells, on monocytes, dendritic cells, and subgroups of natural killer (NK) cells. The human LILR family contains nine proteins (LILRA1-3,and 5, and LILRB1-5). From functional assays, and as the cytoplasmic domains of various LILRs, for example LILRB1 (LIR-1), LILRB2 (LIR-2), and LILRB3 (LIR-3) contain immunoreceptor tyrosine-based inhibitory motifs (ITIMs) it is thought that LIR proteins are inhibitory receptors. Of the eight LIR family proteins, only LIR-1(LILRB1), and LIR-2 (LILRB2),

>cd04970 Ig6_Contactin_like Sixth Ig domain of contactin

Probab=91.75  E-value=1.6  Score=25.31  Aligned_cols=37  Identities=5%  Similarity=0.022  Sum_probs=28.4

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      ....+.|.+++......|.|.|.|..|....+..+.+
T Consensus        45 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V   81 (85)
T cd04970          45 SNGDLMIRNAQLKHAGKYTCTAQTVVDSLSASADLIV   81 (85)
T ss_pred             ccceEEEccCCHHhCeeeEEEEecCCCcEEEEEEEEE
Confidence            3457899999999999999999998876544433433

Ig6_Contactin_like: Sixth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd04978 Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

Probab=91.74  E-value=1.2  Score=25.06  Aligned_cols=30  Identities=10%  Similarity=-0.031  Sum_probs=25.1

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        40 ~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~   69 (76)
T cd04978          40 GGTLILSNVQPNDTAVYQCNASNVHGYLLA   69 (76)
T ss_pred             CCEEEECCCChhhCEEEEEEEEccCCeEEE
Confidence            456889999999999999999999886543

Ig4_L1-NrCAM_like: fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd04969 Ig5_Contactin_like Fifth Ig domain of contactin

Probab=91.41  E-value=1.4  Score=24.69  Aligned_cols=29  Identities=10%  Similarity=0.080  Sum_probs=25.0

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++.+.....|.|.|.|..|....
T Consensus        39 ~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~   67 (73)
T cd04969          39 GSLEILNVTKSDEGKYTCFAENFFGKANS   67 (73)
T ss_pred             CeEEEccCChhHCEEEEEEEECCCCceEE
Confidence            46899999999999999999999987544

Ig5_Contactin_like: Fifth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd04974 Ig3_FGFR Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=91.23  E-value=1.5  Score=25.78  Aligned_cols=33  Identities=21%  Similarity=0.120  Sum_probs=27.0

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ..+.|.++.+.....|.|.|.|..|....+..+
T Consensus        55 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~sa~L   87 (90)
T cd04974          55 EVLYLRNVSFDDAGEYTCLAGNSIGPSHHSAWL   87 (90)
T ss_pred             ceEEEeccccccCcEEEEEeecccCcccCCEEE
Confidence            457888899999999999999999986655444

Ig3_FGFR: third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs.

>cd05725 Ig3_Robo Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=91.13  E-value=0.9  Score=25.10  Aligned_cols=29  Identities=10%  Similarity=0.237  Sum_probs=24.6

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.+.....|.|.|.|..|...
T Consensus        34 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   62 (69)
T cd05725          34 DKSLKIRNVTAGDEGSYTCEAENMVGKIE   62 (69)
T ss_pred             CCEEEECcCChhHCEEEEEEEEcCCCcEE
Confidence            34689999999999999999999988643

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=90.91  E-value=1.9  Score=36.20  Aligned_cols=91  Identities=14%  Similarity=0.156  Sum_probs=53.9

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCC-ce--EeecCCCC--------------------------------C
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK-TI--AASTKGED--------------------------------Q  122 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~-~~--~~~t~~~~--------------------------------~  122 (197)
                      .....+.+.+|-+| +|.++|+|.|..|...... ..  .+..+..|                                +
T Consensus       657 t~~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~it~~~~l~v~dPt~~~d~~~se  735 (952)
T COG4733         657 TSAAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVIITLVIRLVVGDPTGAVDITSTE  735 (952)
T ss_pred             ccccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEEEeeeeEEEecCCcceEEeeee
Confidence            34567899999996 8999999999998754433 22  22222111                                1


Q ss_pred             CCeeecCCCCCcc---cccce--EEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         123 TDWINIPLSNLDE---ALEMP--LVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       123 ~~w~~~~~~~~~~---~~~~~--~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ..+..........   ++...  +.-.+|+++..|.|++++.|..|.+.+.+
T Consensus       736 i~~s~~~d~~~~Ar~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~~~~e  787 (952)
T COG4733         736 IRSAVIADGNFQARSLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNNDKWE  787 (952)
T ss_pred             eeeeccccchhHHhhhhccccccccccCcCCCceEEEEeeecccccccccce
Confidence            1111111100000   00111  12259999999999999999999877544

>TIGR00864 PCC polycystin cation channel protein

Probab=90.76  E-value=17  Score=35.39  Aligned_cols=28  Identities=21%  Similarity=0.351  Sum_probs=21.2

Q ss_pred             EEECCCCCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          83 FTLTQLKCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        83 ~~i~~L~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      ..+.-.+|| .|.+.+.+.|..|....+.
T Consensus      1662 ~~vt~~~pG-~Y~VtL~aSN~vG~~t~s~ 1689 (2740)
T TIGR00864      1662 AKLNPLEAG-PCDIFLQAANLLGQATADC 1689 (2740)
T ss_pred             eEEecCCCc-eEEEEEEEeecccceeeEE
Confidence            444557787 7999999999998875543

Note: this model has been restricted to the amino half because for technical reasons.

>KOG1948|consensus

Probab=90.55  E-value=7.2  Score=33.24  Aligned_cols=22  Identities=23%  Similarity=0.436  Sum_probs=20.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEE
Q psy9139         138 EMPLVIENLLPATRYELTISAK  159 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~  159 (197)
                      +..|.|+||.|+..|.++|.+.
T Consensus       945 nG~yRiRGL~Pdc~Y~V~vk~~  966 (1165)
T KOG1948|consen  945 NGTYRIRGLLPDCEYQVHVKSY  966 (1165)
T ss_pred             CCcEEEeccCCCceEEEEEeec
Confidence            4579999999999999999987

>cd05867 Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=90.43  E-value=2  Score=24.22  Aligned_cols=28  Identities=14%  Similarity=0.074  Sum_probs=24.4

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...+.|.++.+.....|.|.|.|..|.-
T Consensus        40 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   67 (76)
T cd05867          40 SGALILTDVQPSDTAVYQCEARNRHGNL   67 (76)
T ss_pred             CCEEEECCCChhhCEEEEEEEECCCCeE
Confidence            3568999999999999999999998864

Ig4_L1-CAM_like: fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05735 Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=90.27  E-value=2.4  Score=24.84  Aligned_cols=37  Identities=11%  Similarity=0.089  Sum_probs=29.2

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      ..+.|.++.......|.|.|.|..|.......+.+..
T Consensus        47 s~L~I~~~~~~D~G~YtC~A~N~~G~~~~~~~L~V~~   83 (88)
T cd05735          47 STLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQE   83 (88)
T ss_pred             EEEEECCCCcccCEEEEEEEEcCCCcceEEEEEEEeC
Confidence            4688888999999999999999999876554555443

Ig8_DSCAM: the eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>KOG4228|consensus

Probab=90.19  E-value=3.6  Score=35.74  Aligned_cols=107  Identities=21%  Similarity=0.231  Sum_probs=68.7

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCC-EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCccc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYR   81 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p-~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~   81 (197)
                      +|+|.+....|-....+.+.+..-|..+ ...+......+..+.|....-   ....|.+.++. ..+ +..+.. ....
T Consensus         1 ~Y~~~~~~~~~~~~~~~~v~v~~~p~~~~~~~vt~~~~~~~~~~~~~~~t---~~~~y~v~~~~~~s~-~~~~~~-~~~~   75 (1087)
T KOG4228|consen    1 NYTCLARSGLGPGELITYVRVNGGPPGPSTPNVTGSTATSWVQAELLGST---WPNYYQVIFKALSSG-YGYIDV-DLTT   75 (1087)
T ss_pred             CeeeeecccCCCccceEEEEecCCCCCCCCcccccccccceeehhhccCC---ChhhhheeeeEeccC-cceeec-ccee
Confidence            5999999999987777777777555444 477777778888888887552   44667777762 222 333322 2233


Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      .+.+..+.+...+.+  .+.|..|.+.++....-++
T Consensus        76 ~~s~~~~~~~~~~~~--~evnt~~~a~~~~~~~~rt  109 (1087)
T KOG4228|consen   76 RLSYPCLSPPSFLEL--VEVNTIGRAPFQCPVAPRT  109 (1087)
T ss_pred             ecccCCCCCcchhhh--hhcccccccccccccCCcc
Confidence            366666777776766  6777777776655443333

>cd05723 Ig4_Neogenin Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=90.14  E-value=1.8  Score=24.09  Aligned_cols=27  Identities=11%  Similarity=0.050  Sum_probs=22.0

Q ss_pred             EEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          83 FTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        83 ~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +.+.++.+.....|.|.|.|..|....
T Consensus        39 l~i~~v~~~D~G~Y~C~A~N~~G~~~~   65 (71)
T cd05723          39 LQVLGLVKSDEGFYQCIAENDVGNVQA   65 (71)
T ss_pred             EEEEcCCcccCEEEEEEEEcCCCEEEE
Confidence            556688888889999999999987543

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd05869 Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=90.10  E-value=2.3  Score=25.40  Aligned_cols=30  Identities=17%  Similarity=0.180  Sum_probs=25.3

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        62 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~   91 (97)
T cd05869          62 VSSLTLKYIQYTDAGEYLCTASNTIGQDSQ   91 (97)
T ss_pred             EEEEEEecCccCcCEEEEEEEecCCCCeeE
Confidence            356889999999999999999999987644

Ig5_NCAM-1: The fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM) and heterophilic (NCAM-non-NCAM) interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (tr

>KOG3632|consensus

Probab=90.05  E-value=0.43  Score=40.49  Aligned_cols=125  Identities=15%  Similarity=0.104  Sum_probs=65.3

Q ss_pred             EEEEeecCCeEEEEeeeCCCCC--ccccEEEEEEEeCCCCcEEEEeCCcccE--EEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGG--AIITHYIVSYRDRTEDWQSVHVDAEYRE--FTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~--~~i~~y~v~~~~~~~~~~~~~~~~~~~~--~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      +.++.....++.|.|++|..+.  .++..|.+....  +...... .+..+.  ...-++.. ..|.+.|.+..+.|.+.
T Consensus       584 ~~~vkqla~sv~vawepps~pP~~~~~~~~~~~v~~--elrq~l~-~gs~tka~~E~ld~~a-~s~~isvq~ltSrGsqd  659 (1335)
T KOG3632|consen  584 GAAVKQLAGSVHVAWEPPSSPPFTAPARMIGATVLM--ELRQTLY-AGSLTKAMQESLDNSA-HSGYISVQRLTSRGSQD  659 (1335)
T ss_pred             hhhhhhhccceeeeccCCCCCCccccceeeeeecch--hhhhhcc-cccchHHHHhhccccC-CceeeehhhhhccCCCC
Confidence            5566677889999999975222  334444443321  1111111 111111  11222233 34666777777777665


Q ss_pred             CCCceEeecCCCC----------------CCCeeecCCCCC------c-c-----cccceEEEcCCCCCCeEEEEEEEEc
Q psy9139         109 PSKTIAASTKGED----------------QTDWINIPLSNL------D-E-----ALEMPLVIENLLPATRYELTISAKN  160 (197)
Q Consensus       109 ~s~~~~~~t~~~~----------------~~~w~~~~~~~~------~-~-----~~~~~~~i~~L~p~t~Y~v~V~a~n  160 (197)
                      ...++-......+                .+.|.....+..      . +     .....|++.+|.|++.|.++|-|.-
T Consensus       660 ~lrc~Llvgg~a~vvpsqlrv~n~tqtSa~itwvp~nsn~~Hviyln~eE~~ps~a~~y~ytf~~lrpgt~y~a~vea~~  739 (1335)
T KOG3632|consen  660 QLRCILLVGGAAPVVPSQLRVWNATQTSAMITWVPFNSNFLHVIYLNAEEPRPSVAEMYNYTFMRLRPGTDYWASVEAAL  739 (1335)
T ss_pred             cceeeEeccccccccchhhhhhhhhchhhheeeeecCCCcceeeecCCccCCCchhhhhHHHHhccCCCCccceeccccc
Confidence            4433222211111                455644332110      0 0     2356789999999999999999875


Q ss_pred             C
Q psy9139         161 D  161 (197)
Q Consensus       161 ~  161 (197)
                      .
T Consensus       740 p  740 (1335)
T KOG3632|consen  740 P  740 (1335)
T ss_pred             C
Confidence            4

>KOG3515|consensus

Probab=89.99  E-value=0.59  Score=38.70  Aligned_cols=61  Identities=25%  Similarity=0.513  Sum_probs=51.4

Q ss_pred             EEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe
Q psy9139           5 YTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD   66 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~   66 (197)
                      ..|++.|..|++..+..+....-|..|. +.+.......+.|.|.+.++++.+ ..|.+.+..
T Consensus       669 ~~c~t~n~lg~~~v~~~~~~~t~~~~~~n~~~~~~~~~~i~l~~~p~fdgg~~-q~f~~~~~~  730 (741)
T KOG3515|consen  669 NGCTTQNLLGSDHVSGAIHSGTASVGPINLTYDNLTYSTISLEWMPGFDGGLQ-QRFFLKYYD  730 (741)
T ss_pred             ceeeecccCCCccccceecCCcCCCCccceEeeeeeeeeeceeeeeccccccc-cceeeehhh
Confidence            6899999999998888887778888886 888889999999999999988766 556676653

>cd04968 Ig3_Contactin_like Third Ig domain of contactin

Probab=89.80  E-value=2.4  Score=24.68  Aligned_cols=30  Identities=7%  Similarity=0.034  Sum_probs=25.7

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        52 ~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~   81 (88)
T cd04968          52 GAVLKIPNIQFEDEGTYECEAENIKGKDTH   81 (88)
T ss_pred             CCEEEECCCCcccCEEEEEEEEECCCcEEE
Confidence            457899999999999999999999987543

Ig3_Contactin_like: Third Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05733 Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=89.78  E-value=2.4  Score=24.06  Aligned_cols=28  Identities=7%  Similarity=0.108  Sum_probs=20.3

Q ss_pred             ccEEEECCCCC----CCEEEEEEEEEcCCcCC
Q psy9139          80 YREFTLTQLKC----GTHYKINIKLVNSIGES  107 (197)
Q Consensus        80 ~~~~~i~~L~p----~~~y~~~v~a~~~~g~~  107 (197)
                      ...+.|..+.+    .....|.|.|.|..|..
T Consensus        38 ~g~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~   69 (77)
T cd05733          38 SGTLVIDNMNGGRAEDYEGEYQCYASNELGTA   69 (77)
T ss_pred             CCEEEEeccCCCCCcCCCEEEEEEEEcCCCcE
Confidence            34566766644    45689999999999864

Ig6_L1-CAM_like: domain similar to the sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains NrCAM [Ng(neuronglia)CAM-related cell adhesion molecule], which is primarily expressed in the nervous system, and human neurofascin.

>PF07679 I-set: Immunoglobulin I-set domain; InterPro: IPR013098 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=89.50  E-value=1.2  Score=25.95  Aligned_cols=31  Identities=19%  Similarity=0.164  Sum_probs=26.3

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ......+.|.++.......|.|.+.|..|..
T Consensus        52 ~~~~~~L~I~~v~~~D~G~Y~C~~~n~~g~~   82 (90)
T PF07679_consen   52 DGGSSSLTIKNVTREDAGTYTCVASNSSGEA   82 (90)
T ss_dssp             ETTEEEEEESSESGGGSEEEEEEEEETTEEE
T ss_pred             ccceeEEccCCCChhhCEEEEEEEEECCCEE
Confidence            3467789999999999999999999987754

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents I-set domains, which are found in several cell adhesion molecules, including vascular (VCAM), intercellular (ICAM), neural (NCAM) and mucosal addressin (MADCAM) cell adhesion molecules, as well as junction adhesion molecules (JAM). I-set domains are also present in several other diverse protein families, including several tyrosine-protein kinase receptors, the hemolymph protein hemolin, the muscle proteins titin, telokin, and twitchin, the neuronal adhesion molecule axonin-1 [], and the signalling molecule semaphorin 4D that is involved in axonal guidance, immune function and angiogenesis [].; PDB: 3MTR_A 2EDK_A 3DMK_B 1KOA_A 3NCM_A 2NCM_A 2V9Q_A 2CR3_A 3QQN_A 3QR2_A ....

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=89.06  E-value=0.64  Score=28.32  Aligned_cols=22  Identities=23%  Similarity=0.459  Sum_probs=17.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEE
Q psy9139         138 EMPLVIENLLPATRYELTISAK  159 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~  159 (197)
                      ...++|.+|.|++.|-|+|+|.
T Consensus        66 ~~~~~l~~L~p~t~YCv~V~~~   87 (106)
T PF09294_consen   66 NSSVTLSDLKPGTNYCVSVQAF   87 (106)
T ss_dssp             SEEEEEES--TTSEEEEEEEEE
T ss_pred             CCEEEEeCCCCCCCEEEEEEEE
Confidence            4467999999999999999994

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>cd04975 Ig4_SCFR_like Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR) and similar proteins

Probab=88.86  E-value=3.7  Score=24.94  Aligned_cols=30  Identities=20%  Similarity=0.080  Sum_probs=25.4

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|..+.+.....|.|.|.|..|....
T Consensus        64 ~~~L~i~~v~~~D~G~Ytc~A~N~~G~~~~   93 (101)
T cd04975          64 VSELKLVRLKESEAGTYTFLASNSDASKSL   93 (101)
T ss_pred             EEEEEEeecCHhhCeeEEEEEECCCccEEE
Confidence            356889999999999999999999986543

Ig4_SCFR_like; fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR). In addition to SCFR this group also includes the fourth Ig domain of platelet-derived growth factor receptors (PDGFR), alpha and beta, the fourth Ig domain of macrophage colony stimulating factor (M-CSF), and the Ig domain of the receptor tyrosine kinase KIT. SCFR and the PDGFR alpha and beta have similar organization: an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR, this fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth SCFR_Ig-like domain abolishes

>PHA02633 hypothetical protein; Provisional

Probab=88.78  E-value=0.94  Score=24.73  Aligned_cols=28  Identities=21%  Similarity=0.284  Sum_probs=21.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP   28 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P   28 (197)
                      .+|.|.|+..|.-=....++.+.|....
T Consensus        29 DSGiYiC~~rn~t~c~~~si~l~V~~~~   56 (63)
T PHA02633         29 DSGIYMCITKNETYSDMMKFDLCICLRI   56 (63)
T ss_pred             cCcEEEEEEcCCCeeEEEEEEEEEeecc
Confidence            4799999999876667777777765443

>cd05853 Ig6_Contactin-4 Sixth Ig domain of contactin-4

Probab=88.59  E-value=3.4  Score=24.23  Aligned_cols=37  Identities=5%  Similarity=0.060  Sum_probs=30.0

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                      ...+.|.+++......|.|.|.|..+.-..+..+.+.
T Consensus        46 ~~~L~I~nv~~~dsG~YtC~a~n~~~~~~a~a~L~V~   82 (85)
T cd05853          46 AGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVR   82 (85)
T ss_pred             CCcEEEecCCHHHCEEEEEEEEcccCceEEEEEEEEe
Confidence            4578999999999999999999999876666555554

Ig6_Contactin-4: sixth Ig domain of the neural cell adhesion molecule contactin-4. Contactins are neural cell adhesion molecules, and are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. Highest expresson of contactin-4 is in testes, thyroid, small intestine, uterus and brain. Contactin-4 plays a role in the response of neuroblastoma cells to differentiating agents, such as retinoids. The contactin 4 gene is associated with cerebellar degeneration in spinocerebellar ataxia type 16.

>cd05746 Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like domain of peroxidasin

Probab=88.13  E-value=1.9  Score=23.81  Aligned_cols=29  Identities=10%  Similarity=0.121  Sum_probs=25.0

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++.+.....|.|.|.|..|....
T Consensus        36 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~   64 (69)
T cd05746          36 GYLAIRDVGVADQGRYECVARNTIGYASV   64 (69)
T ss_pred             CEEEECcCChhhCEEEEEEEECCCCcEEE
Confidence            46899999999999999999999987543

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self.

>cd05731 Ig3_L1-CAM_like Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=87.78  E-value=1.6  Score=24.06  Aligned_cols=29  Identities=10%  Similarity=0.212  Sum_probs=24.3

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.......|.|.|.|..|...
T Consensus        35 ~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~   63 (71)
T cd05731          35 NKTLKIDNVSEEDDGEYRCTASNSLGSAR   63 (71)
T ss_pred             CCEEEECCCCHHHCEEEEEEEEeCCceEE
Confidence            44688999999889999999999988643

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin.

>cd05750 Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain in neuregulins (NRGs)

Probab=87.68  E-value=3.3  Score=23.03  Aligned_cols=30  Identities=13%  Similarity=0.200  Sum_probs=25.1

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ....+.|..+.+.....|.|.|.|..|...
T Consensus        41 ~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   70 (75)
T cd05750          41 KNSELQINKAKLADSGEYTCVVENILGNDT   70 (75)
T ss_pred             ceEEEEEccCCcccCeEEEEEEEEcCCcee
Confidence            345688999999999999999999998643

Ig_Pro_neuregulin: immunoglobulin (Ig)-like domain in neuregulins (NRGs). NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. There are four members of the neuregulin gene family (NRG1, -2, -3, and -4). The NRG-1 protein, binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. The other NRGs proteins bind one or the other or both of these ErbBs. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates processes such as target cell differentiation, and Schwann cell surv

>KOG4152|consensus

Probab=86.74  E-value=1.3  Score=35.18  Aligned_cols=33  Identities=15%  Similarity=0.297  Sum_probs=27.1

Q ss_pred             EcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         143 IENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       143 i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      -..|-+|+.|+|+|.|.|..|.++.+......+
T Consensus       651 k~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kT  683 (830)
T KOG4152|consen  651 KTSLVTGQAYRFRVTAINGKGPGPASTILKLKT  683 (830)
T ss_pred             ccccccccceeeeeeeeeccCCCchhhheeeee
Confidence            347889999999999999999999766555554

>cd05868 Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule)

Probab=86.68  E-value=4.1  Score=23.04  Aligned_cols=30  Identities=7%  Similarity=0.040  Sum_probs=24.8

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ..+.+.++++.....|+|.|.|..|....+
T Consensus        41 ~~l~i~~v~~~D~G~Y~C~A~N~~G~~~~~   70 (76)
T cd05868          41 DTIIFSKVQERSSAVYQCNASNEYGYLLAN   70 (76)
T ss_pred             CEEEECCCCHhhCEEEEEEEEcCCCEEEEE
Confidence            357788999999999999999999865443

Ig4_ NrCAM: fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six IG-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05729 Ig2_FGFR_like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor and similar proteins

Probab=86.37  E-value=4.4  Score=23.05  Aligned_cols=27  Identities=15%  Similarity=0.063  Sum_probs=22.2

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.|.++.+.....|.|.+.|..|..
T Consensus        51 ~~l~i~~~~~~d~g~Y~C~~~n~~g~~   77 (85)
T cd05729          51 WTLILESVVPSDSGKYTCIVENKYGSI   77 (85)
T ss_pred             EEEEEeECCcccCEEEEEEEEECCceE
Confidence            457788899998899999999988753

Ig2_FGFR_like: domain similar to the second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three Ig-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=86.23  E-value=3.8  Score=34.53  Aligned_cols=46  Identities=20%  Similarity=0.278  Sum_probs=32.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc---ceEEEEeeeCCCcCCCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK---NYVFATLSVNGGKAFHSWSP  187 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~---~~~~~t~~~~~~~~~p~~~~  187 (197)
                      ...|.+++|.+| .|.++|+|.|..|....   +..+   .+.+...||+.+-
T Consensus       659 ~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f---~i~g~~~Ppp~~~  707 (952)
T COG4733         659 AAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEF---ALNGKKVPPPKAM  707 (952)
T ss_pred             ccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEE---EecCCCCCCCccc
Confidence            567999999995 99999999999987653   3444   4445444554443

>cd05865 Ig1_NCAM-1 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1

Probab=86.08  E-value=4.4  Score=24.30  Aligned_cols=30  Identities=17%  Similarity=0.089  Sum_probs=24.7

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCC-cCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSI-GESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~-g~~~~  109 (197)
                      ...+.|.++.+.....|.|.|.|.. |....
T Consensus        59 ~~~L~I~~v~~~D~G~YtC~A~N~~~g~~~~   89 (96)
T cd05865          59 SSTLTIYNANIDDAGIYKCVVSNEDEGESEA   89 (96)
T ss_pred             ceEEEEeccChhhCEEEEEEEEcCCCCcEEE
Confidence            3568999999999999999999987 54433

Ig1_NCAM-1: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans

>cd05876 Ig3_L1-CAM Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=85.90  E-value=2.2  Score=23.72  Aligned_cols=29  Identities=14%  Similarity=0.111  Sum_probs=25.0

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.+.....|.|.|.|..|...
T Consensus        35 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   63 (71)
T cd05876          35 NKTLQLDNVLESDDGEYVCTAENSEGSAR   63 (71)
T ss_pred             CCEEEEcccCHHhCEEEEEEEEcCCCeEE
Confidence            45788999999999999999999998654

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd04977 Ig1_NCAM-1_like First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1 and similar proteins

Probab=85.77  E-value=5.4  Score=23.56  Aligned_cols=28  Identities=7%  Similarity=-0.037  Sum_probs=24.1

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ....++|.++.+.....|.|.|.|..|.
T Consensus        55 ~~~~L~I~~v~~~D~G~Y~C~A~N~~g~   82 (92)
T cd04977          55 VRSTLTIYNANIEDAGIYKCVATDAKGT   82 (92)
T ss_pred             CEEEEEEecCCcccCEEEEEEEEcCCCC
Confidence            3457999999999999999999998654

Ig1_NCAM-1 like: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the s

>cd05874 Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule)

Probab=85.60  E-value=4.8  Score=22.86  Aligned_cols=27  Identities=7%  Similarity=0.015  Sum_probs=19.0

Q ss_pred             cEEEECCCCCC----CEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCG----THYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~----~~y~~~v~a~~~~g~~  107 (197)
                      ..+.|..+.+.    ....|.|.|.|..|..
T Consensus        39 g~l~i~~~~~~~~~~d~G~Y~C~A~N~~G~~   69 (77)
T cd05874          39 GTLVINIMNGEKAEAYEGVYQCTARNERGAA   69 (77)
T ss_pred             ceEEEeccccCCCCCCCEEEEEEEEcCCCeE
Confidence            45566555542    4688999999998864

Ig6_NrCAM: sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>TIGR00864 PCC polycystin cation channel protein

Probab=85.35  E-value=40  Score=33.19  Aligned_cols=105  Identities=14%  Similarity=0.173  Sum_probs=54.1

Q ss_pred             CeeEEE--EEEeCCCCceeEEEEEecCCCCCCEEEEEeec-----CCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEE
Q psy9139           2 VGNYTC--LADNIFGKDDIYYQVTILSPPGVPNILLQSTT-----THSISILWKPSYDGGAIITHYIVSYRDRTEDWQSV   74 (197)
Q Consensus         2 ~g~y~c--~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~-----~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~   74 (197)
                      .|.|.+  .|.|.+|+...++.+.|+.+-.-..+......     .....+.|......+.++ .|...+......    
T Consensus      1753 ~G~y~VtVta~N~vss~~~s~~V~VqepV~GL~i~~~~~~~~~~~~ag~~v~F~a~vstGsnV-sw~W~f~~g~s~---- 1827 (2740)
T TIGR00864      1753 AGLHLVTMKAFNELGSANASEEVDVQEPISGLKIRAADAGEQNFFAADSSVCFQGELATGTNV-SWCWAIDGGSSK---- 1827 (2740)
T ss_pred             CceEEEEEEEEccccccceeEEEEEEeccccceEecCCCCcccceecCcEEEEEEEccCCCee-EEEEEeCCCCcc----
Confidence            366766  56799998888888888876654432221111     122334443322112232 233222111100    


Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                        ..  .....+-.++| .|.+.+.|.|..+....+..+.++
T Consensus      1828 --~g--k~v~~Tf~~aG-~ytV~L~AsN~vs~~~~s~~~~VQ 1864 (2740)
T TIGR00864      1828 --MG--KHACMTFPDAG-TFAIRLNASNAVSGKSASREFFAE 1864 (2740)
T ss_pred             --cc--ceeEEecCCCe-EEEEEEEEEcccCcceeeeeEEEE
Confidence              11  12233345666 789999999998776655444443

Note: this model has been restricted to the amino half because for technical reasons.

>cd05885 Ig2_Necl-4 Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4))

Probab=85.23  E-value=1.5  Score=25.44  Aligned_cols=16  Identities=13%  Similarity=-0.097  Sum_probs=13.5

Q ss_pred             CCeeEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGKD   16 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~   16 (197)
                      +.+.|+|.|.|..+..
T Consensus        54 dg~~~~C~A~n~a~~~   69 (80)
T cd05885          54 DGAILSCEASHPALVS   69 (80)
T ss_pred             CCcEEEEEEEChhhCC
Confidence            4689999999998854

Ig2_Necl-4: second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4)). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1-Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Ig domains are likely to participate in ligand binding and recognition. Necl-4 is expressed on Schwann cells, and plays a key part in initiating peripheral nervous system (PNS) myelination. In injured peripheral nerve cells, the mRNA signal for both Necl-4 and Necl-5 was observed to be elevated. Necl-4 participates in cell-cell adhesion and is proposed to play a role in tumor suppression.

>cd05863 Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3)

Probab=85.16  E-value=3.7  Score=22.76  Aligned_cols=50  Identities=16%  Similarity=0.112  Sum_probs=34.0

Q ss_pred             CCCCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         121 DQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       121 ~~~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      |...|.+....+........+.|.++.+...-.+.+.|.|..|.-..+..
T Consensus        13 P~v~W~kdg~~l~~~~~~~~L~i~~v~~~D~G~YtC~a~N~~g~~~~~~~   62 (67)
T cd05863          13 PEFQWYKDGKLISGKHSQHSLQIKDVTEASAGTYTLVLWNSAAGLEKRIS   62 (67)
T ss_pred             CEEEEEECCEECcccCCcCEEEECCCCHHHCEEEEEEEEECCccEEEEEE
Confidence            35667655433321112457999999998888999999999996554433

Ig2_VEGFR-3: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-3 (Flt-4) binds two members of the VEGF family (VEGF-C and -D) and is involved in tumor angiogenesis and growth.

>cd05738 Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=84.22  E-value=5.5  Score=22.32  Aligned_cols=27  Identities=15%  Similarity=0.113  Sum_probs=23.2

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.|.+++......|.|.|.|..|..
T Consensus        38 g~L~i~~~~~~D~G~Y~C~a~N~~G~~   64 (74)
T cd05738          38 GALQIENSEESDQGKYECVATNSAGTR   64 (74)
T ss_pred             cEEEECCCChhhCEEEEEEEECCCCce
Confidence            357889999999999999999999863

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains.

>cd05873 Ig_Sema4D_like Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4D

Probab=83.93  E-value=0.81  Score=27.01  Aligned_cols=13  Identities=31%  Similarity=0.552  Sum_probs=10.9

Q ss_pred             CCeeEEEEEEeCC
Q psy9139           1 MVGNYTCLADNIF   13 (197)
Q Consensus         1 ~~g~y~c~a~n~~   13 (197)
                      ++|.|+|.|.+..
T Consensus        59 DsG~Y~C~a~e~~   71 (87)
T cd05873          59 DAGRYQCLSVEKS   71 (87)
T ss_pred             HCEEEEEEEEecc
Confidence            4799999998863

Ig_Sema4D_like; Immunoglobulin (Ig)-like domain of Sema4D. Sema4D is a Class IV semaphorin. Semaphorins are classified based on structural features additional to the Sema domain. Sema4D has extracellular Sema and Ig domains, a transmembrane domain, and a short cytoplasmic domain. Sema4D plays a part in the development of GABAergic synapses. Sema4D in addition is an immune semaphorin. It is abundant on resting T cells; its expression is weak on resting B cells and antigen presenting cells (APCs), but is upregulated by various stimuli. The receptor used by Sema4D in the immune system is CD72. Sem4D enhances the activation of B cells and DCs through binding CD72, perhaps by reducing CD72s inhibitory signals. The receptor used by Sema4D in the non-lymphatic tissues is plexin-B1. Sem4D is anchored to the cell surface but its extracellular domain can be released from the cell surface by a metalloproteas

>cd04976 Ig2_VEGFR Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR)

Probab=82.59  E-value=3.8  Score=22.84  Aligned_cols=28  Identities=11%  Similarity=0.074  Sum_probs=24.3

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...+.|.++.+.....|.|.|.|..|..
T Consensus        34 ~~~L~I~~v~~~D~G~YtC~a~N~~g~~   61 (71)
T cd04976          34 GHSLTIKDVTEEDAGNYTVVLTNKQAKL   61 (71)
T ss_pred             CCEEEECcCCHHHCEEEEEEEEcCCccE
Confidence            4578999999999999999999988754

Ig2_VEGFR: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A. VEGFR-1 may play an inhibitory part in these processes by binding VEGF and interfering with its interaction with VEGFR-2. VEGFR-1 has a signa

>cd05728 Ig4_Contactin-2-like Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=81.93  E-value=5.6  Score=23.00  Aligned_cols=27  Identities=15%  Similarity=0.103  Sum_probs=23.3

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.|.++.......|.|.|.|..|..
T Consensus        51 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~   77 (85)
T cd05728          51 GDLRITKLSLSDSGMYQCVAENKHGTI   77 (85)
T ss_pred             CEEEEeeCCHHHCEEEEEEEECCCCeE
Confidence            468888999999999999999998864

Ig4_Contactin-2-like: fourth Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>cd05773 Ig8_hNephrin_like Eighth immunoglobulin-like domain of nephrin

Probab=81.72  E-value=9.7  Score=23.37  Aligned_cols=29  Identities=17%  Similarity=0.124  Sum_probs=22.8

Q ss_pred             cEEEECCCC-CCCEEEEEEEEEcCCcCCCC
Q psy9139          81 REFTLTQLK-CGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        81 ~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+.|.++. ......|.|.|.|..|....
T Consensus        69 s~L~I~~v~~~~D~G~Y~C~A~N~~G~~~~   98 (109)
T cd05773          69 SILTIINVSAALDYALFTCTAHNSLGEDSL   98 (109)
T ss_pred             eEEEECcCCccCCCEEEEEEEEeCCccCcE
Confidence            468888886 46677899999999987643

Ig8_hNephrin_like: domain similar to the eighth immunoglobulin-like domain in human nephrin. Nephrin is an integral component of the slit diaphragm, and is a central component of the glomerular ultrafilter. Nephrin plays a structural role, and has a role in signaling. Nephrin is a transmembrane protein having a short intracellular portion, and an extracellular portion comprised of eight Ig-like domains, and one fibronectin type III-like domain. The extracellular portions of nephrin, from neighboring foot processes of separate podocyte cells, may interact with each other, and in association with other components of the slit diaphragm, form a porous molecular sieve within the slit pore. The intracellular portion of nephrin is associated with linker proteins, which connect nephrin to the actin cytoskeleton. The intracellular portion is tyrosine phosphorylated, and mediates signaling from the slit diaphragm into the p

>KOG4228|consensus

Probab=81.48  E-value=7.3  Score=33.99  Aligned_cols=128  Identities=13%  Similarity=0.110  Sum_probs=74.4

Q ss_pred             EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          36 QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        36 ~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      ...+...++++|.++..  ..+..|++.+.+.+..................++.|-..+.+.+.+....+.+.....+..
T Consensus       173 ~~~~~~~it~~w~~~~~--~~~~~ykl~~~~~d~~~~~~v~~~~~~~~~t~~~~~~~~~~~~~ae~~~~~~~~~~a~i~~  250 (1087)
T KOG4228|consen  173 EEEEYTTITGSWSPPHA--VSLDTYKLLHLDPDTGYEISVTLTPPGSGGTGDLGPPSISRFKCAEPDRGPLGSSTAEIEA  250 (1087)
T ss_pred             cceEEEEEEecCCCCCc--ccchhhhhhhcCCcccceeeeeccCCCCCcccCCCCcccccccccCccccccCCCCcceEE
Confidence            55667788999998652  2345677766643332222222223334455677888888888888777666665555555


Q ss_pred             ecCCCC---------------CCCeeecCCCCCcc---cccceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         116 STKGED---------------QTDWINIPLSNLDE---ALEMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       116 ~t~~~~---------------~~~w~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      ++....               ...|.......+..   . .....+.++.|.+.|.+.+.+....|..+
T Consensus       251 r~~~s~~~~~~~~~~~~~~~~~~t~~~~~~~~S~~~v~~-~~~~~i~~~~p~~~~~~~it~~~~~~g~~  318 (1087)
T KOG4228|consen  251 RQLQSVSKKNFETKHVFKNLVPGTWESFSNYASTTNVSG-RSFPLIVNLNPETEYSFVITVRLSSGGAP  318 (1087)
T ss_pred             EehhhhhccccccceeecccCCceeeeeecccccCcccC-CCcceeccCCCcccccceeeccccCCCee
Confidence            443222               33343322221111   1 22277888999999999988887555544

>cd05724 Ig2_Robo Second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=81.27  E-value=8  Score=22.13  Aligned_cols=28  Identities=11%  Similarity=0.122  Sum_probs=24.2

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...+.|.++.+.....|.|.+.|..|..
T Consensus        50 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   77 (86)
T cd05724          50 DGNLLIAEARKSDEGTYKCVATNMVGER   77 (86)
T ss_pred             CCEEEEeECCcccCEEEEEEEEeccCce
Confidence            3468899999999999999999998864

Ig2_Robo: domain similar to the second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antago

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	197
2nzi_A	305	Crystal Structure Of Domains A168-A170 From Titin L		1e-07
2edb_A	116	Solution Structure Of The Fourth Fibronectin Type I		2e-05
3lpw_A	197	Crystal Structure Of The Fniii-Tandem A77-A78 From		2e-05
1x5i_A	126	The Solution Structure Of The Fourth Fibronectin Ty		2e-05
1x4z_A	121	Solution Structure Of The 2nd Fibronectin Type Iii		5e-05
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		5e-05
2jll_A	389	Crystal Structure Of Ncam2 Igiv-Fn3ii Length = 389		6e-05
2kbg_A	114	Solution Structure Of The Second Fibronectin Type-I		1e-04
1bpv_A	112	Titin Module A71 From Human Cardiac Muscle, Nmr, 50		6e-04
2xyc_A	291	Crystal Structure Of Ncam2 Igiv-Fn3i Length = 291		7e-04

>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILW-KPSYDGGAIITHY 60
           G Y   A N FG D    ++ +   P  P  + +   +  S+++ W +P+ DGG+ IT+Y
Sbjct: 174 GFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNY 233
Query: 61  IVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
           IV     T E W  V    E R +T+  L   T Y+  +   N  G SKPS+    +   
Sbjct: 234 IVEKCATTAERWLRVGQARETR-YTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITK 292
Query: 120 EDQTDWIN 127
           ED+T  +N
Sbjct: 293 EDKTRAMN 300

>pdb|2EDB|A Chain A, Solution Structure Of The Fourth Fibronectin Type Iii Domain Of Human Netrin Receptor Dcc Length = 116

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQ 87
           P  P+ L     T+ I + W P  +   ++  YI+ Y   +   ++V VD++ R +++ +
Sbjct: 18  PDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIER 77
Query: 88  LKCGTHYKINIKLVNSIGESKP 109
           L+  +HY I++K  N+ GE  P
Sbjct: 78  LESSSHYVISLKAFNNAGEGVP 99

>pdb|3LPW|A Chain A, Crystal Structure Of The Fniii-Tandem A77-A78 From The A-Band Of Titin Length = 197

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 27  PPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
           PPG   I L   T +S+S+ W KP +DGG+ I  YIV  + +  D  +     +  E T+
Sbjct: 105 PPG--KITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVKVTEATI 162
Query: 86  TQLKCGTHYKINIKLVNSIGESKPSK 111
           T L  G  Y   +   N  G S P +
Sbjct: 163 TGLIQGEEYSFRVSAQNEKGISDPRQ 188

>pdb|1X5I|A Chain A, The Solution Structure Of The Fourth Fibronectin Type Iii Domain Of Human Neogenin Length = 126

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQ 87
           P VP+ L       SI + W P  +   ++  Y + Y   +   Q++ VD + R +T+  
Sbjct: 28  PEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIEN 87
Query: 88  LKCGTHYKINIKLVNSIGESKP 109
           L   +HY I +K  N++GE  P
Sbjct: 88  LDPSSHYVITLKAFNNVGEGIP 109

>pdb|1X4Z|A Chain A, Solution Structure Of The 2nd Fibronectin Type Iii Domain From Mouse Biregional Cell Adhesion Molecule-RelatedDOWN- Regulated Oncogenes (Cdon) Binding Protein Length = 121

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 25  LSPPGVPNILLQSTTTH-SISILWKPSYDGGAIITHYIVSYRD--RTEDW--QSVHVDAE 79
           LSPP  P+    ST +  S+ + W P  +GG  I  + V Y+   +  DW   +  +   
Sbjct: 15  LSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPS 74
Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
                +T L+ G  YK  ++ +N +GES+PS
Sbjct: 75  RLSVEITGLEKGISYKFRVRALNMLGESEPS 105

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 26  SPPGVPNILLQSTTTHSISILWKP-SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
            PP  P  ++++    ++ + WKP + DGG+++T+Y +  R+      S    + Y   T
Sbjct: 11  EPPRFP--IIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTT 68
Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
           +  L+ G  Y+  I   N  G+SKP +  A
Sbjct: 69  IEGLRAGKQYEFRIIAENKHGQSKPCEPTA 98

>pdb|2JLL|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3ii Length = 389

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP---NILLQSTTTHSISILWKPSYDGGAIITH 59
           G Y C A N  G     Y + +   P  P    I+  S TT  +S   KP   GG  I H
Sbjct: 171 GRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVS-FNKPDSHGGVPIHH 229
Query: 60  YIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK 111
           Y V  ++  +E W+ V          L  L+  T Y+I +  VN  G+   SK
Sbjct: 230 YQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSK 282

>pdb|2KBG|A Chain A, Solution Structure Of The Second Fibronectin Type-Iii Module Of Ncam2 Length = 114

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           +  P  P+I  Q ++  S  +      DGGA I  YIV YR  D+ + W    V      
Sbjct: 6   MREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDH 65
Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPS 110
             L  L+    Y++ I   N +G S+P+
Sbjct: 66  IILEHLQWTMGYEVQITAANRLGYSEPT 93

>pdb|1BPV|A Chain A, Titin Module A71 From Human Cardiac Muscle, Nmr, 50 Structures Length = 112

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 25  LSPPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTED-WQSVHV-DAEYR 81
           + PPG P  L  + T H++++ W KP Y GG  IT YIV  RD     W   +  +    
Sbjct: 11  IDPPGKPVPL--NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILEN 68
Query: 82  EFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAASTKGED 121
           EFT++ L     Y+  +   N+ G  S PS+   A T  +D
Sbjct: 69  EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDD 109

>pdb|2XYC|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3i Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP---NILLQSTTTHSISILWKPSYDGGAIITH 59
           G Y C A N  G     Y + +   P  P    I+  S TT  +S   KP   GG  I H
Sbjct: 171 GRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVS-FNKPDSHGGVPIHH 229
Query: 60  YIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK 111
           Y V  ++  +E W+ V          L  L+  T Y+I +  VN  G+   SK
Sbjct: 230 YQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSK 282

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	197
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	2e-26
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	2e-24
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	3e-17
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	5e-24
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	6e-23
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	3e-22
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	3e-21
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	3e-21
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	8e-21
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	7e-20
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	9e-20
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	2e-19
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	3e-14
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	4e-19
2crm_A	120	Fibronectin type-III domain containing protein 3A;	5e-19
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	1e-18
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	1e-18
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	1e-18
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	2e-18
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	5e-18
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	5e-18
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	7e-11
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	3e-09
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	6e-07
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	1e-17
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	2e-17
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	3e-17
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	4e-17
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	8e-17
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	4e-16
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	9e-17
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	9e-17
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	2e-16
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	3e-16
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-16
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	4e-16
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-14
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	2e-11
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	4e-16
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	1e-11
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	5e-16
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	5e-16
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	6e-16
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	1e-15
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	5e-11
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	1e-10
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	3e-05
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	1e-15
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	1e-15
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	1e-14
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	3e-15
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	3e-13
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	6e-13
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	8e-10
2crz_A	110	Fibronectin type-III domain containing protein 3A;	4e-15
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	4e-15
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	5e-15
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-13
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	6e-15
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	7e-15
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	5e-14
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	3e-12
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	2e-09
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	9e-15
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	1e-14
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	1e-14
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	2e-14
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-14
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-12
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	3e-12
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-10
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	3e-10
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	2e-14
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	2e-14
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	2e-14
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	2e-14
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-13
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	3e-14
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	8e-12
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	1e-08
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	4e-14
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	6e-14
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	1e-13
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	1e-13
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	1e-13
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-13
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	2e-13
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-13
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	2e-13
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	3e-13
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	3e-13
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	3e-13
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	1e-12
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	4e-13
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	5e-13
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	5e-13
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	6e-11
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	1e-10
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	8e-13
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	1e-12
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	2e-12
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	2e-12
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	3e-12
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	8e-12
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	3e-12
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	5e-12
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	5e-12
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	7e-12
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	9e-12
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	1e-11
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	1e-11
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	2e-11
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	3e-11
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	4e-11
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	5e-11
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	5e-08
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	5e-11
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	7e-11
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	8e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-11
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	8e-11
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	1e-10
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	2e-10
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	2e-10
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	5e-10
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	6e-10
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	3e-09
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	1e-08
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	4e-08
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	1e-08
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	3e-08
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	5e-07
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	5e-06
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	5e-07
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	8e-07
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	1e-06
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	4e-06
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	1e-05
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	1e-05
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	3e-05
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	3e-05
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	9e-05
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	1e-04
1wwb_X	103	Protein (brain derived neurotrophic factor recepto	1e-04
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	1e-04
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	2e-04
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	3e-04
1he7_A	126	High affinity nerve growth factor receptor; transf	4e-04
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	6e-04
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	9e-04

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 99.5 bits (248), Expect = 2e-26
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYI 61
           GNY C A N  G++ + + +     P  P+I      + +  + +  P   GG  I  Y 
Sbjct: 89  GNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYK 148

Query: 62  VSYRDRTED-----WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS 116
             +R   E+     W      +     T+  LK  T Y + +  +N  G  + S      
Sbjct: 149 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208

Query: 117 TK 118
           T+
Sbjct: 209 TQ 210

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 40/206 (19%), Positives = 67/206 (32%), Gaps = 48/206 (23%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHY 60
           G Y C A N  G     Y + +   P  P  + +   +  +  + +  P   GG  I HY
Sbjct: 171 GRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHY 230

Query: 61  IVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-- 117
            V  ++  +E W+ V          L  L+  T Y+I +  VN  G+   SK     T  
Sbjct: 231 QVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLP 290

Query: 118 ----------------------------------------KGEDQTDWINIPLSNLDEAL 137
                                                   + +D+ D          +  
Sbjct: 291 VREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWL---EKKVQGN 347

Query: 138 EMPLVIENLLPATRYELTISAKNDAG 163
           +  +++E+L     YE+ I+A N  G
Sbjct: 348 KDHIILEHLQWTMGYEVQITAANRLG 373

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 77.5 bits (191), Expect = 3e-17
 Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 5   YTCLADNIFGK----DDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHY 60
               A N  G+        +Q   +  P  P+I  Q ++  S  +      DGGA I  Y
Sbjct: 267 IRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEY 326

Query: 61  IVSYR--DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           IV YR  D+ + W    V        L  L+    Y++ I   N +G S+P+  
Sbjct: 327 IVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 380

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 93.3 bits (232), Expect = 5e-24
 Identities = 34/207 (16%), Positives = 63/207 (30%), Gaps = 52/207 (25%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYR-DRTEDWQSVHVDA 78
            +     P  P+I      + +  + +  P   GG  I  Y   +R    E W S   DA
Sbjct: 2   PLAQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 61

Query: 79  EY----REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG--------------- 119
           +        T+  LK  T Y + +  +N  G  + S      T+                
Sbjct: 62  KEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGE 121

Query: 120 ---------------------------EDQTDWINIPLSNLDEALEMPLVIENLLPATRY 152
                                         ++W          +    +++++L     Y
Sbjct: 122 DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWK---PEIRLPSGSDHVMLKSLDWNAEY 178

Query: 153 ELTISAKNDAG-STNKNYVFATLSVNG 178
           E+ + A+N  G S   ++VF T + + 
Sbjct: 179 EVYVVAENQQGKSKAAHFVFRTAAAHH 205

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 87.6 bits (217), Expect = 6e-23
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEY 80
             +  P  P+I  Q ++  S  +      DGGA I  YIV YR  D+ + W    V    
Sbjct: 4   ASMREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNK 63

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPS 110
               L  L+    Y++ I   N +G S+P+
Sbjct: 64  DHIILEHLQWTMGYEVQITAANRLGYSEPT 93

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 90.6 bits (225), Expect = 3e-22
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHY 60
           G Y   A N FG D    ++ +   P  P  + +   +  S+++ W  P+ DGG+ IT+Y
Sbjct: 174 GFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNY 233

Query: 61  IVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
           IV       E W  V    E R +T+  L   T Y+  +   N  G SKPS+    +   
Sbjct: 234 IVEKCATTAERWLRVGQARETR-YTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITK 292

Query: 120 EDQTD 124
           ED+T 
Sbjct: 293 EDKTR 297

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 83.6 bits (207), Expect = 3e-21
 Identities = 24/95 (25%), Positives = 46/95 (48%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
            P  P+ L     T+ I + W P  +   ++  YI+ Y   +   ++V VD++ R +++ 
Sbjct: 17  VPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIE 76

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           +L+  +HY I++K  N+ GE  P    A +     
Sbjct: 77  RLESSSHYVISLKAFNNAGEGVPLYESATTRSITS 111

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 83.6 bits (207), Expect = 3e-21
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 14  GKDDIYYQVTILSPPGVPNIL-LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ 72
           G        T+   P +PN   + + T +S+++ WK   D G+ I ++++ + +   + +
Sbjct: 4   GSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGE 63

Query: 73  SVHV-DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
                    ++F +T+L      K  +   N  G S  S+ +   T G 
Sbjct: 64  FCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 82.4 bits (204), Expect = 8e-21
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 5/114 (4%)

Query: 13  FGKDDIYYQVTIL---SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE 69
            G       + +      P  P   L +    +I++ W   +DG + +  YI+   +   
Sbjct: 3   SGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNA 62

Query: 70  DWQSV--HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
            W  +   VD +    T+  L     Y+  +  VN +G+ + SK     +  E 
Sbjct: 63  PWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 79.8 bits (197), Expect = 7e-20
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 1/96 (1%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR 81
           +  S PG P +++ +T  ++  + W P  +    +  Y + Y         ++    + +
Sbjct: 3   SGSSGPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQ 62

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            FT+T L  GT Y   +   N  G  +  +    + 
Sbjct: 63  HFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTP 98

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 79.8 bits (197), Expect = 9e-20
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
             P VP+ L       SI + W P  +   ++  Y + Y   +   Q++ VD + R +T+
Sbjct: 26  RVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTI 85

Query: 86  TQLKCGTHYKINIKLVNSIGESKP-SKTIAASTK 118
             L   +HY I +K  N++GE  P  ++      
Sbjct: 86  ENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 80.9 bits (200), Expect = 2e-19
 Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 51/186 (27%)

Query: 25  LSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR 81
           +  PG P ++ ++  T  S+++ W  P  DGG+ I +YIV  R+   + + +V  +    
Sbjct: 3   MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKT 62

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE--------------------- 120
            + + QL+ G  Y   +   N  G   P++T  +    E                     
Sbjct: 63  SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLS 122

Query: 121 ----------------------DQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISA 158
                                     W       + EA      I  L+    Y   +SA
Sbjct: 123 WEKPEHDGGSRILGYIVEMQTKGSDKWATCATVKVTEA-----TITGLIQGEEYSFRVSA 177

Query: 159 KNDAGS 164
           +N+ G 
Sbjct: 178 QNEKGI 183

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 2/98 (2%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE 79
           V     P  P  I L   T +S+S+ W KP +DGG+ I  YIV  + +  D  +     +
Sbjct: 97  VKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVK 156

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             E T+T L  G  Y   +   N  G S P +      
Sbjct: 157 VTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVI 194

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 77.7 bits (192), Expect = 4e-19
 Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 2/95 (2%)

Query: 26  SPPGVPNIL-LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           S P       +   +     + W+     G  +T Y + +       Q  +       + 
Sbjct: 6   SGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPG-LSYE 64

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
           +  L   T Y   ++ ++ +G    S+ +A  T  
Sbjct: 65  IKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP 99

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 77.9 bits (192), Expect = 5e-19
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 14  GKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRD--RT 68
           G   +    T    PG+P    +     +HS  I W  P  +GGA I  Y+V   +    
Sbjct: 4   GSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG 63

Query: 69  EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             W+ ++  A  RE    +L  G  Y++ +  ++  G+S  S+++   T
Sbjct: 64  NKWEMIYSGAT-REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 111

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 76.3 bits (188), Expect = 1e-18
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 23  TILSPPGVP-----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHV 76
           +  S   VP      +    T  +S ++ WK           YI+   D     ++ V+V
Sbjct: 2   SSGSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYV 61

Query: 77  DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
             E    T+  L   + Y   +K  N  G S  SKT+   T  
Sbjct: 62  GKE-TMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 103

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 76.5 bits (188), Expect = 1e-18
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYREF 83
           S    P  L+   T   + + W P       +  Y++  R  ++ W+ +   V     E 
Sbjct: 6   SGLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETEL 65

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
            +  L     Y+  +        S PS T   ST G 
Sbjct: 66  LVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 76.6 bits (189), Expect = 1e-18
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 14  GKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRD-RTED 70
           G       + I+  PG P  + ++     ++++ W  P  DG A IT Y +   D ++ +
Sbjct: 4   GSSGASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSME 63

Query: 71  WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           W +V         T+T+L  G  Y   +   N  G S+ +  
Sbjct: 64  WFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATM 105

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 75.8 bits (187), Expect = 2e-18
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 23  TILSPPGVP-NILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAE 79
           +  S P +P + +L       +S+ W KPS         YI+   +  +        D E
Sbjct: 3   SGSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGE 62

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
              +T+  L+  T YK  +   NS G+S PS+ +  +T
Sbjct: 63  DLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 100

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 75.2 bits (185), Expect = 5e-18
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 6/105 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTED-----WQSVHVDAE 79
           S P  P+I      + +  + +  P   GG  I  Y   +R   E+     W      + 
Sbjct: 6   SGPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 65

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTD 124
               T+  LK  T Y + +  +N  G  + S      T+   +  
Sbjct: 66  EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPS 110

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 80.2 bits (197), Expect = 5e-18
 Identities = 36/213 (16%), Positives = 53/213 (24%), Gaps = 52/213 (24%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP--NILLQSTTTHSISILWK-PSYDGGAIITH 59
           G Y C+     G     Y   ++  P VP     L S     + I     S +G   I  
Sbjct: 236 GKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVA 295

Query: 60  YIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN--SIGESKPSKTIAAST 117
             V Y   +  W           + +  L   T Y+I++ L      G   P   +   T
Sbjct: 296 REVEYCTASGSWNDRQPVDS-TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRT 354

Query: 118 KGED----------------------------------------------QTDWINIPLS 131
           K  D                                                + +   +S
Sbjct: 355 KCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVS 414

Query: 132 NLDEALEMPLVIENLLPATRYELTISAKNDAGS 164
              E       I NL P T   + +   N  G 
Sbjct: 415 WDTENSHPQHTITNLSPYTNVSVKLILMNPEGR 447

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 59.8 bits (144), Expect = 7e-11
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 14/113 (12%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR---------DR 67
           + + +   +P       +  ST    I + W+       +IT Y ++Y+         D 
Sbjct: 453 LIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDL 512

Query: 68  TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
           +     V        F    L  GT Y   I+   + G   P+     +    
Sbjct: 513 SNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISA 565

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 54.8 bits (131), Expect = 3e-09
 Identities = 29/198 (14%), Positives = 52/198 (26%), Gaps = 58/198 (29%)

Query: 23  TILSPPGVP--NILLQSTTTHSISILWK-PSYDGG-AIITHYIVSYRDRTEDWQSVH--- 75
           T  + P      + +    +  I+I W+   Y+       +  V Y  +    + V    
Sbjct: 354 TKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV 413

Query: 76  ---VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST--------------- 117
               +  + + T+T L   T+  + + L+N  G    S+ +   T               
Sbjct: 414 SWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDEDLPGAVPTESIQG 472

Query: 118 --------------------------------KGEDQTDWINIPLSNLDEALEMPLVIEN 145
                                             + + D  N          E   +   
Sbjct: 473 STFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFG 532

Query: 146 LLPATRYELTISAKNDAG 163
           L P T Y  TI A    G
Sbjct: 533 LYPGTTYSFTIRASTAKG 550

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 47.9 bits (113), Expect = 6e-07
 Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 43/138 (31%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ------------- 72
           S P        + T ++++++ KP++  GA ++ Y +   +                   
Sbjct: 567 SMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVP 626

Query: 73  ------------------------------SVHVDAEYREFTLTQLKCGTHYKINIKLVN 102
                                         ++  +  Y  +  T L     Y+I  +  +
Sbjct: 627 IHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAAS 686

Query: 103 SIGESKPSKTIAASTKGE 120
                     +  +TKG 
Sbjct: 687 RANGETKIDCVQVATKGA 704

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 74.0 bits (182), Expect = 1e-17
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 21  QVTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSVH 75
           +  I S   +P    +++    ++  + + W+P  +    I  + V +  +     ++++
Sbjct: 8   KPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN 67

Query: 76  -VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
                  + T+  LK    Y   +   N  G  + S+ I  +T+ E 
Sbjct: 68  TTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 73.2 bits (180), Expect = 2e-17
 Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDR-TEDWQSVHV-D 77
            T    P  P +++    +T  I + W+ P+ D       Y V Y        +  +   
Sbjct: 12  ATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSH 71

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
               + T+  L   T Y   +   N  G  + S  +   T+ E
Sbjct: 72  PGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 72.8 bits (179), Expect = 3e-17
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSV--HV 76
              LSPP  P    + + +  S+ + W P  +GG  I  + V Y+   +  DW      +
Sbjct: 12  HGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI 71

Query: 77  DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK 111
                   +T L+ G  YK  ++ +N +GES+PS 
Sbjct: 72  PPSRLSVEITGLEKGISYKFRVRALNMLGESEPSA 106

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 72.8 bits (179), Expect = 4e-17
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 11/109 (10%)

Query: 14  GKDDIYYQVTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--- 66
           G       ++   PP +P    N+ + +    S+++ ++P YDG   I+ ++V  +    
Sbjct: 1   GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVV 60

Query: 67  -RTEDWQSVHVDAEY---REFTLTQLKCGTHYKINIKLVNSIGESKPSK 111
              E+W  +H  +     R   +  L   T Y   ++ VN +G S PS+
Sbjct: 61  GEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQ 109

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 74.0 bits (182), Expect = 8e-17
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 27  PPGVP-NILLQSTTTHSISILWKP--SYDGGAIITHYIVSYR--DRTEDWQSVHV-DAEY 80
           P   P N++ Q T  +++ I W P    +  A   HY VS++       W++ ++ D   
Sbjct: 104 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 163

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
               +        Y I +  +N  GES  +        GED
Sbjct: 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 204

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 72.1 bits (177), Expect = 4e-16
 Identities = 29/191 (15%), Positives = 51/191 (26%), Gaps = 53/191 (27%)

Query: 24  ILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVH-VDAEY 80
           +   P  P +   +       I W+   D  + I HY + +        W + +      
Sbjct: 2   VQDVPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED------------------- 121
               + Q+    +Y   +   N IG S PS    + T   D                   
Sbjct: 62  DSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNL 121

Query: 122 ----------------------------QTDWINIPLSNLDEALEMPLVIENLLPATRYE 153
                                          W N    N+ +  +  +VI +     +Y 
Sbjct: 122 VISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN---NIFDWRQNNIVIADQPTFVKYL 178

Query: 154 LTISAKNDAGS 164
           + + A ND G 
Sbjct: 179 IKVVAINDRGE 189

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 72.0 bits (177), Expect = 9e-17
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 21  QVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD---RTEDWQSVHV 76
              +   P  P ++ L      S+ + W P  D  + IT +I+ Y D   +   W     
Sbjct: 10  PAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE 69

Query: 77  DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK 111
            +  +      L    +Y   +  VNSIG+S PS+
Sbjct: 70  VSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSE 104

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 71.6 bits (176), Expect = 9e-17
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 21  QVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVD 77
              +   PG P    +   T +S+++ W+P   G    + YI+    +  +  WQ+V   
Sbjct: 9   NYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH 68

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
            +   +T+  L+  T Y   ++ +N  G S PS
Sbjct: 69  VKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPS 101

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 70.4 bits (173), Expect = 2e-16
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTL 85
           P   PN+   + +  SI++ W+    G   I +Y + Y ++ T+  Q V V +    +T+
Sbjct: 18  PGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVSS--HSYTI 75

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             LK  T Y   +   N  G    +  +A  T  +
Sbjct: 76  NGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 70.4 bits (173), Expect = 3e-16
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           S PG   N+   ST+  SI I W+P       +  Y +         +  +++ +   + 
Sbjct: 6   SGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCT-EVSTGKEQNIEVDGLSYK 64

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           L  LK  T Y +     N  G    +  I   T 
Sbjct: 65  LEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTL 98

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 70.1 bits (172), Expect = 3e-16
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 6/104 (5%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD 77
           + +++  GVP    N   +  +  SI + W P       I +Y + Y+D     +     
Sbjct: 9   IQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSD--TIANYELVYKDGEHGEEQRITI 66

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
                + L  LK  + Y   +   +  G    +  I+A T    
Sbjct: 67  EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 73.7 bits (181), Expect = 4e-16
 Identities = 26/177 (14%), Positives = 61/177 (34%), Gaps = 38/177 (21%)

Query: 22  VTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAE 79
               + P   ++     T  S+S  W P       +T Y V     ++T   + +++  +
Sbjct: 16  FQGPAIPAPTDLKFTQVTPTSLSAQWTP---PNVQLTGYRVRVTPKEKTGPMKEINLAPD 72

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST---------KGEDQTD------ 124
                ++ L   T Y++++  +     S+P++ +  +          +  D T+      
Sbjct: 73  SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITIS 132

Query: 125 W-----------INIPLSNLDEALEMPL-------VIENLLPATRYELTISAKNDAG 163
           W           ++   +N    ++  +        I  L P T Y++ +   ND  
Sbjct: 133 WRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNA 189

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 69.8 bits (171), Expect = 1e-14
 Identities = 34/182 (18%), Positives = 54/182 (29%), Gaps = 47/182 (25%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQSVHVDAE 79
           VT L     P    +   T  +I+I W+        IT + V       +      +  +
Sbjct: 107 VTTLENVSPPRRARVTDATETTITISWRT---KTETITGFQVDAVPANGQTPIQRTIKPD 163

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA------------------------ 115
            R +T+T L+ GT YKI +  +N    S P    A+                        
Sbjct: 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQ 223

Query: 116 -------------STKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDA 162
                           G    + +  P   + EA      I  L P T Y + + A  + 
Sbjct: 224 PPRARITGYIIKYEKPGSPPREVVPRPRPGVTEA-----TITGLEPGTEYTIYVIALKNN 278

Query: 163 GS 164
             
Sbjct: 279 QK 280

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
                N+   +TT +S+ + W+P     A IT YI+ Y                   E T
Sbjct: 202 IDAPSNLRFLATTPNSLLVSWQPP---RARITGYIIKYEKPGSPPREVVPRPRPGVTEAT 258

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPS 110
           +T L+ GT Y I +  + +  +S+P 
Sbjct: 259 ITGLEPGTEYTIYVIALKNNQKSEPL 284

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 72.5 bits (178), Expect = 4e-16
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 26  SPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYR--DRTEDWQSVHV-DAEY 80
            P  VP  + ++  +  ++ + W   S     +IT Y   YR      ++    +  A  
Sbjct: 114 DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHA 173

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           R F +  L+  T Y+  ++  ++   S+ S      T+
Sbjct: 174 RSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQ 211

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 16/106 (15%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH-------- 75
            PP  PN+     +  S+ + W    + G  I  + V YR   + ++WQ+ +        
Sbjct: 3   YPPTPPNVT--RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60

Query: 76  ----VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
                  +    ++T LK    Y+  I  V S  ++K S T A   
Sbjct: 61  KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFY 106

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 69.7 bits (171), Expect = 5e-16
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 4/100 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR----DRTEDWQSVHVDAEYR 81
           S P    ++ +     ++ + W+P  +    IT YI+ Y        +DW    +  +  
Sbjct: 10  SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRL 69

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              +  L   T Y   I+  NS G    S  I   T    
Sbjct: 70  THQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVS 109

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 69.4 bits (170), Expect = 5e-16
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTL 85
           P  VP +   S T  SI++ W        II  Y + Y ++   ++ S    ++     +
Sbjct: 8   PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARI 67

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             L+ G  Y + ++     G  K S  +   T  +
Sbjct: 68  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 69.3 bits (170), Expect = 6e-16
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 6/97 (6%)

Query: 28  PGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTED-----WQSVHVDAEYR 81
           P  P+I      + +  + +  P   GG  I  Y   +R   E+     W      +   
Sbjct: 7   PSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEG 66

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
             T+  LK  T Y + +  +N  G  + S      T+
Sbjct: 67  IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 73.5 bits (179), Expect = 1e-15
 Identities = 30/238 (12%), Positives = 61/238 (25%), Gaps = 64/238 (26%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYI 61
           G   C ++       +   +    P      +      +  + + W   ++       Y+
Sbjct: 136 GVKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYV 195

Query: 62  VSYR---------DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK- 111
           V  R         D    WQ+V    +     LT ++    Y+  +  VN  G    +  
Sbjct: 196 VQRRWNYGIHPSEDDATHWQTVAQTTD-ERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAP 254

Query: 112 -------------------TIAASTKGEDQTDWINI-----PLSNLD------------- 134
                               +A ST   D +  + I        ++              
Sbjct: 255 SKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVS 314

Query: 135 ---------------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN 177
                          +  +  +++E L P   Y + + A    G T       +L   
Sbjct: 315 SKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFT 372

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 60.0 bits (144), Expect = 5e-11
 Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 14/111 (12%)

Query: 26  SPPGVP------NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--------W 71
           S P  P      N  + S  + +++I+W    +    + HY V +               
Sbjct: 265 SAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKK 324

Query: 72  QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQ 122
           +    D       L +L+    Y + ++ +   G+++      +       
Sbjct: 325 RRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTH 375

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 58.8 bits (141), Expect = 1e-10
 Identities = 22/157 (14%), Positives = 51/157 (32%), Gaps = 17/157 (10%)

Query: 27  PPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDW-----------QSV 74
           P  +    +      +    WK    +    +T + V++ + T +            QS 
Sbjct: 528 PENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQ 587

Query: 75  HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLSNLD 134
            + +++   T+  L+  T Y++ ++++   GE  P+      T     +      L +  
Sbjct: 588 ILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEG-PATIKTFRTPELPPSSAHRSHLKHRH 646

Query: 135 EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF 171
                P       P     L +    D+  T  ++  
Sbjct: 647 PHHYKPSPERYGKPIPNPLLGL----DSTRTGHHHHH 679

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 8/119 (6%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR------DRTEDWQSVHVDAE 79
           + P              + + WK + D    +  Y V +       +RT   ++      
Sbjct: 403 TRPLEVGAPFYQDGQLQVKVYWKKTEDPT--VNRYHVRWFPEACAHNRTTGSEASSGMTH 460

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLSNLDEALE 138
                L  L     YK+ ++ +     SK       +          + P+  L EA  
Sbjct: 461 ENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGH 519

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 68.7 bits (168), Expect = 1e-15
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 27  PPGVP-NILLQSTTTHSISILWK--PSYDGGAIITHYIVSYR----DRTEDWQSVHVDAE 79
           P   P      +    +I + W   P+ +    I  + + YR    D   D++   V+ +
Sbjct: 8   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 67

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
               +++ L+  T Y I ++  N  GES+ S  +   TK   
Sbjct: 68  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARS 109

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 70.8 bits (173), Expect = 1e-15
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREF 83
           S P    I    +  +S  I W         I+ YI+ +R  +    W+   +      +
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQPSH--ISKYILRWRPKNSVGRWKEATIPGHLNSY 58

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           T+  LK G  Y+  +  +   G  + ++    +T    
Sbjct: 59  TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTST 96

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 68.1 bits (166), Expect = 1e-14
 Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEY 80
           T  SP    +  +   T  S  + W  +      ++ + V Y   +  ++ Q + + +  
Sbjct: 108 TPFSPLVATSESVTEITASSFVVSWVSA---SDTVSGFRVEYELSEEGDEPQYLDLPSTA 164

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
               +  L  G  Y +N+  ++  GE     + + +T
Sbjct: 165 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 201

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 71.8 bits (176), Expect = 3e-15
 Identities = 28/178 (15%), Positives = 50/178 (28%), Gaps = 48/178 (26%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
            P   ++   +    ++ + W P       +T+++V Y      ED   + +        
Sbjct: 95  VPPPTDLRFTNIGPDTMRVTWAPPPSI--DLTNFLVRYSPVKNEEDVAELSISPSDNAVV 152

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAA----------------------------- 115
           LT L  GT Y +++  V    ES P +                                 
Sbjct: 153 LTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRAT 212

Query: 116 ---------STKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGS 164
                          +     +P S         + + NL P T Y ++I A N    
Sbjct: 213 ITGYRIRHHPEHFSGRPREDRVPHSRNS------ITLTNLTPGTEYVVSIVALNGREE 264

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 66.0 bits (161), Expect = 3e-13
 Identities = 29/172 (16%), Positives = 45/172 (26%), Gaps = 37/172 (21%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
                 I     T +S ++ W       A IT Y + +     +   +   V       T
Sbjct: 186 LDSPTGIDFSDITANSFTVHWIAP---RATITGYRIRHHPEHFSGRPREDRVPHSRNSIT 242

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG--------EDQTDWINI-------- 128
           LT L  GT Y ++I  +N   ES       ++                 + I        
Sbjct: 243 LTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDAPAVT 302

Query: 129 ---------PLSNLDEALEMPL-------VIENLLPATRYELTISAKNDAGS 164
                             E  +        I  L P   Y +T+ A    G 
Sbjct: 303 VRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGD 354

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 65.2 bits (159), Expect = 6e-13
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 7/111 (6%)

Query: 4   NYTC--LADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYI 61
            Y    +A N   +  +             ++ + + T  S+ I W         + +Y 
Sbjct: 251 EYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDA---PAVTVRYYR 307

Query: 62  VSYR--DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
           ++Y         Q   V       T++ LK G  Y I +  V   G+S  S
Sbjct: 308 ITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPAS 358

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 56.0 bits (135), Expect = 8e-10
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 39/176 (22%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR---DRTEDWQSVHVDAEYR 81
           LSPP   ++     T   +++ W+ S      IT Y ++      +  +     V A+  
Sbjct: 2   LSPPTNLHLEANPDTG-VLTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQS 58

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-------KGEDQTD------W--- 125
             T   L  G  Y +++  V    ES P               +  +         W   
Sbjct: 59  SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPP 118

Query: 126 --INI--------PLSNLDEALEMPL-------VIENLLPATRYELTISAKNDAGS 164
             I++        P+ N ++  E+ +       V+ NLLP T Y +++S+  +   
Sbjct: 119 PSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE 174

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 67.4 bits (165), Expect = 4e-15
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREF 83
            P   P +         I + W  P  DGG+ I+ Y V       ++ + V+  +E  E 
Sbjct: 10  GPCLPPRLQ-GRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSE-VEC 67

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           T++ L  G  Y   ++  N +G    S+    +T
Sbjct: 68  TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITT 101

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 67.0 bits (164), Expect = 4e-15
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 27  PPGVP-NILLQSTTTHSISILWK--PSYDGGAIITHYIVSYR----DRTEDWQSVHVDAE 79
           P   P     ++ +   I + W   PS +    I  + + YR    D   D++   V+  
Sbjct: 4   PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
            +   +  L+  T Y I ++  N  GES+ S  +   TK
Sbjct: 64  KQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICETK 102

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 71.7 bits (175), Expect = 5e-15
 Identities = 27/217 (12%), Positives = 58/217 (26%), Gaps = 61/217 (28%)

Query: 3   GNYTCLADNIFGKDD-IYYQVTILSPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHY 60
           G  +C  +  F +       +    PP  P+ L        + + W  P   GG     Y
Sbjct: 308 GATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVY 367

Query: 61  IVSYR------------DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK 108
            V+              + +  +            T++ L+   +Y   ++  N +    
Sbjct: 368 SVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLV 427

Query: 109 PSKTIAASTKGEDQT------------------------------------------DWI 126
            S++   ++   +QT                                          +  
Sbjct: 428 TSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSY 487

Query: 127 NIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAG 163
           N+  +           +++L P T Y + + A    G
Sbjct: 488 NVRRTEGFSV-----TLDDLAPDTTYLVQVQALTQEG 519

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 66.7 bits (162), Expect = 2e-13
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY 80
            ++      P  + L+  +T S+S+ W       + +  Y V+YR + +         E 
Sbjct: 435 ASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEG 494

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              TL  L   T Y + ++ +   G+   SK     T   +
Sbjct: 495 FSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 67.4 bits (165), Expect = 6e-15
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 6   TCLADNIFGKDDIYYQ-VTILSPPGVP----NILLQSTTTHSISILWK-PSYDGGAIITH 59
           +  +    G     +  +   +   VP     IL     T S+ ++W+ P+   G II  
Sbjct: 2   SSGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILA 60

Query: 60  YIVSYR--DRTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS 116
           Y +++R    T +  +V  +    R++T T LK  + Y   I      G  + ++ +  +
Sbjct: 61  YQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVT 120

Query: 117 TKGED 121
           T+   
Sbjct: 121 TEKRS 125

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 71.0 bits (174), Expect = 7e-15
 Identities = 31/172 (18%), Positives = 53/172 (30%), Gaps = 36/172 (20%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
            P   ++   +    ++ + W P       +T+++V Y      ED   + +        
Sbjct: 187 VPPPTDLRFTNIGPDTMRVTWAP--PPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVV 244

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-------KGEDQTD------WI----- 126
           LT L  GT Y +++  V    ES P +    +           D T       WI     
Sbjct: 245 LTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRAT 304

Query: 127 --------------NIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGS 164
                           P  +        + + NL P T Y ++I A N    
Sbjct: 305 ITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREE 356

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 68.3 bits (167), Expect = 5e-14
 Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 49/179 (27%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
            P + ++     T  SI + W P     + I  Y ++              VD+    +T
Sbjct: 96  VPQLTDLSFVDITDSSIGLRWTP--LNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYT 153

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAA----------------------------- 115
           +T L+ G  Y I++  + + GES P+                                  
Sbjct: 154 VTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSI 213

Query: 116 ----------STKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGS 164
                       K E+    ++I  S+        +V+ NLLP T Y +++S+  +   
Sbjct: 214 DLTNFLVRYSPVKNEEDVAELSISPSDNA------VVLTNLLPGTEYVVSVSSVYEQHE 266

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 63.3 bits (154), Expect = 3e-12
 Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
                 I     T +S ++ W       A IT Y + +     +   +   V       T
Sbjct: 278 LDSPTGIDFSDITANSFTVHWIA---PRATITGYRIRHHPEHFSGRPREDRVPHSRNSIT 334

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAA 115
           LT L  GT Y ++I  +N   ES       +
Sbjct: 335 LTNLTPGTEYVVSIVALNGREESPLLIGQQS 365

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 29/176 (16%), Positives = 53/176 (30%), Gaps = 39/176 (22%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD---RTEDWQSVHVDAEYR 81
           LSPP   ++     T   +++ W+ S      IT Y ++      +  +     V A+  
Sbjct: 3   LSPPTNLHLEANPDTG-VLTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQS 59

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-------KGEDQTD------WINI 128
             T   L  G  Y +++  V    ES P                  D TD      W  +
Sbjct: 60  SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPL 119

Query: 129 PLSNLD--------------------EALEMPLVIENLLPATRYELTISAKNDAGS 164
             S +                     ++      +  L P   Y++++    + G 
Sbjct: 120 NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGE 175

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 66.2 bits (162), Expect = 9e-15
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDR-TEDWQSVHVD-AEYRE 82
           SPP +  +   S T  ++++ W+ P + G A +  Y++ Y    TEDW   + D  +  +
Sbjct: 9   SPPTLLTVD--SVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTK 66

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           FT+T L       + +K VN+ G S+P   
Sbjct: 67  FTITGLPTDAKIFVRVKAVNAAGASEPKYY 96

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 20  YQVTILSPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTED-----WQS 73
           ++V  LS P  P +     T HSI + W     +         + +    ED     +  
Sbjct: 11  HKVVPLSKPHPPVVG--KVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGV 68

Query: 74  VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           ++         +  L+  T YK  +K+ +  GE + S  ++ +T  E 
Sbjct: 69  IY-TGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 68.3 bits (167), Expect = 1e-14
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR----DRTEDWQSVHVDAEYR 81
           SPP    ++ +     +I + W+P  +    IT YI+ Y         DW    V     
Sbjct: 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRL 166

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
              + +L   T Y   I+  NS G    S+ +   T 
Sbjct: 167 THQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP 203

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 67.5 bits (165), Expect = 2e-14
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 50/187 (26%)

Query: 27  PPGVP-NILLQSTTTHSISILWK----PSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEY 80
           P   P  +     +  +I I W     P +       +Y V ++     + +  + +A  
Sbjct: 4   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE-------------------- 120
             + +T LK  T Y+ ++ +      S  S T   +T                       
Sbjct: 64  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKT 123

Query: 121 ------------------------DQTDWINIPLSNLDEALEMPLVIENLLPATRYELTI 156
                                   D    I+  +        +   I+ L   T Y   I
Sbjct: 124 IIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKI 183

Query: 157 SAKNDAG 163
            A+N  G
Sbjct: 184 QARNSKG 190

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 70.4 bits (172), Expect = 1e-14
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 27  PPGVPNILLQSTTTHSISILWK--PSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           P   P +  +    +   + W   P       I +Y + YR    +  +V+VD+ + E+T
Sbjct: 496 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYT 555

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           L+ L   T Y + +      G     +    + K
Sbjct: 556 LSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 589

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 64.3 bits (156), Expect = 1e-12
 Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 53/214 (24%)

Query: 4   NYTCLADNIFGK---DDIYYQVT---ILSPPGVPNILLQSTTTHSISILWKPSYDGGAII 57
                A+N  GK   D I +        +PP   +++     +  + + W        II
Sbjct: 172 EVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVII 231

Query: 58  THYIVSYRDR-TEDWQSV---HVDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPS 110
             Y + YR +    W  +      +    FT+  LK  T Y   I+ +   G+   S  S
Sbjct: 232 LKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWS 291

Query: 111 KTIAASTKGE----DQTDWINIPLSNLDEALEMPL------------------------- 141
           +  +  T  +      + W  I  S+      + L                         
Sbjct: 292 EEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWK 351

Query: 142 -----------VIENLLPATRYELTISAKNDAGS 164
                       +   L   RY  T++ +N  G 
Sbjct: 352 SHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGK 385

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 63.5 bits (154), Expect = 3e-12
 Identities = 26/210 (12%), Positives = 54/210 (25%), Gaps = 51/210 (24%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILS--PPGVP-NILLQSTTTHSISILWKPSYDGGAIITH 59
              TC        +   Y +TI+S  PP  P N+         +   W    +   + T+
Sbjct: 76  IQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-LETN 134

Query: 60  YIVSYRDRTEDWQSVHV--DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           + +     T  +       D               + ++ ++  N++G+           
Sbjct: 135 FTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPV 194

Query: 118 --------------------------------------------KGEDQTDWINIPLSNL 133
                                                       + +D + W  IP  + 
Sbjct: 195 YKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDT 254

Query: 134 DEALEMPLVIENLLPATRYELTISAKNDAG 163
             +      +++L P T Y   I    + G
Sbjct: 255 A-STRSSFTVQDLKPFTEYVFRIRCMKEDG 283

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 58.9 bits (142), Expect = 1e-10
 Identities = 22/189 (11%), Positives = 43/189 (22%), Gaps = 40/189 (21%)

Query: 18  IYYQVTILSPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDWQSVHV 76
           +               L      + + + W  P       I  + V              
Sbjct: 391 LTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQE 450

Query: 77  DAE-YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG----------EDQTD- 124
           D   +R +    L     Y I +  V + G   P    A   +           +     
Sbjct: 451 DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKN 510

Query: 125 -----WINIPLSNLDEAL----------------------EMPLVIENLLPATRYELTIS 157
                W  +P+   +  +                           + +L   T Y + ++
Sbjct: 511 EAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMA 570

Query: 158 AKNDAGSTN 166
           A  D G  +
Sbjct: 571 AYTDEGGKD 579

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 57.7 bits (139), Expect = 3e-10
 Identities = 25/183 (13%), Positives = 46/183 (25%), Gaps = 54/183 (29%)

Query: 27  PPGVPNILLQSTTTHSISILWK--PSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
                     +    ++ ++WK  P ++    I  Y V+        Q+  V+A      
Sbjct: 308 SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVN 367

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST--------------------------- 117
           LT       Y   + + N +G+S  +     +                            
Sbjct: 368 LT----NDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTP 423

Query: 118 ----------------KGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKND 161
                           K    TDW     +     L       NL  +  Y +T++    
Sbjct: 424 RESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYL-----RGNLAESKCYLITVTPVYA 478

Query: 162 AGS 164
            G 
Sbjct: 479 DGP 481

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 65.6 bits (160), Expect = 2e-14
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 5/99 (5%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEY 80
           ++ S P    + + + T  S+ I W       ++  +Y ++Y         Q   V    
Sbjct: 3   SVSSVPT--KLEVVAATPTSLLISWDAPMSSSSV-YYYRITYGETGGNSPVQEFTVPYSS 59

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
              T++ L  G  Y I +                 S   
Sbjct: 60  STATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINY 98

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 65.4 bits (160), Expect = 2e-14
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREF 83
           S P  P ++++  TT  S+++ W         +T+Y + YR   TE             +
Sbjct: 6   SGPKPPIDLVVTETTATSVTLTWDS--GNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRY 63

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           ++  L   + Y   +  VNSIG   PS+ + A T  + 
Sbjct: 64  SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 65.7 bits (160), Expect = 2e-14
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 16/101 (15%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH-------- 75
            PP  PN+     +  S+ + W    + G  I  + V YR   + ++WQ+ +        
Sbjct: 4   YPPTPPNVT--RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61

Query: 76  ----VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
                  +    ++T LK    Y+  I  V S  ++K S T
Sbjct: 62  KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNT 102

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 67.5 bits (165), Expect = 2e-14
 Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 49/185 (26%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDA 78
           + + +  P   ++     T  SI + W P     + I  Y ++              VD+
Sbjct: 17  RGSHMEVPQPTDLSFVDITDSSIGLRWTPL--NSSTIIGYRITVVAAGEGIPIFEDFVDS 74

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA----------------------- 115
               +T+T L+ G  Y I++  V + GES P+                            
Sbjct: 75  SVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGPDTMRVTW 134

Query: 116 ----------------STKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAK 159
                             K E+    ++I  S+        +V+ NLLP T Y +++S+ 
Sbjct: 135 APPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNA------VVLTNLLPGTEYVVSVSSV 188

Query: 160 NDAGS 164
            +   
Sbjct: 189 YEQHE 193

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 65.6 bits (160), Expect = 1e-13
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
            P   ++   +    ++ + W P       +T+++V Y      ED   + +        
Sbjct: 114 VPPPTDLRFTNIGPDTMRVTWAPPPSI--DLTNFLVRYSPVKNEEDVAELSISPSDNAVV 171

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           LT L  GT Y +++  V    ES P       T
Sbjct: 172 LTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKT 203

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 68.3 bits (167), Expect = 3e-14
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 2/94 (2%)

Query: 27  PPGVPNILLQSTTTHSISILWKP--SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           P   P +  +    +   + W           I +Y + YR    +  +V+VD+ + E+T
Sbjct: 197 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYT 256

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           L+ L   T Y + +      G     +    + K
Sbjct: 257 LSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 61.4 bits (149), Expect = 8e-12
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 56/185 (30%)

Query: 26  SPPGVPNILLQSTTT--HSISILWKP--SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYR 81
             P     +  S T    ++ ++WK    ++    I  Y V+        Q+  V+A   
Sbjct: 6   KAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKL 65

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA--------------------------- 114
              LT       Y   + + N +G+S  +                               
Sbjct: 66  TVNLT----NDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEW 121

Query: 115 ----------------ASTKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISA 158
                            S K    TDW     +          +  NL  +  Y +T++ 
Sbjct: 122 TTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRT-----YLRGNLAESKCYLITVTP 176

Query: 159 KNDAG 163
               G
Sbjct: 177 VYADG 181

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 25/193 (12%), Positives = 48/193 (24%), Gaps = 49/193 (25%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR------TEDWQSVHVDAEY 80
                  L      + + + W    +    +  YI+ +           DWQ        
Sbjct: 101 ATHPVMDLKAFPKDNMLWVEWTTPRES---VKKYILEWCVLSDKAPCITDWQQEDGTVH- 156

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST----------KGEDQTD------ 124
           R +    L     Y I +  V + G   P    A             + +          
Sbjct: 157 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLE 216

Query: 125 WINIPLSNL---------------DEALEMPL-------VIENLLPATRYELTISAKNDA 162
           W  +P+                       + +        + +L   T Y + ++A  D 
Sbjct: 217 WDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDE 276

Query: 163 GSTNK-NYVFATL 174
           G  +   + F T 
Sbjct: 277 GGKDGPEFTFTTP 289

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 64.4 bits (157), Expect = 4e-14
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 24  ILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYR 81
           +L  P   ++ + + T  SI++ W P     A IT Y ++Y   +   + + + V     
Sbjct: 1   MLDAPT--DLQVTNVTDTSITVSWTP---PSATITGYRITYTPSNGPGEPKELTVPPSST 55

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA 115
             T+T L  G  Y +++  +    ES P      
Sbjct: 56  SVTITGLTPGVEYVVSVYALKDNQESPPLVGTQT 89

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 64.0 bits (156), Expect = 6e-14
 Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 5/92 (5%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE 82
           + L  P   ++  +  T  +  + W            Y++S+       Q + +      
Sbjct: 6   SGLEAPR--DLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITS 60

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
             L  L   T Y   ++ +       P  T  
Sbjct: 61  HQLLGLFPSTSYNARLQAMWGQSLLPPVSTSF 92

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 63.6 bits (155), Expect = 1e-13
 Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVH 75
             + +   VP    ++        S+ + W+   +   I+T Y +S+   +RT    + +
Sbjct: 9   QLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHY 68

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           +     E+ +T L   T Y I +  + S G+ + S +  +S 
Sbjct: 69  LPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 110

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 63.1 bits (154), Expect = 1e-13
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDR-TEDWQSVHVD-AEYRE 82
           S P    +     T  + ++ W+ P   G   I  Y+V Y    +E+W   + +  E   
Sbjct: 10  SAPQHLTVE--DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 67

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           FT+  L  G      +  VN  G S+P+  
Sbjct: 68  FTVKDLPTGARILFRVVGVNIAGRSEPATL 97

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 63.3 bits (154), Expect = 1e-13
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--EDWQSVHVDAEYREFT 84
           PP V +I +  ++  S+S+ W         +  Y V Y ++          +        
Sbjct: 8   PPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAE 67

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           L  LK G  Y + ++  +  G     +   + T+ + 
Sbjct: 68  LRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 62.8 bits (153), Expect = 2e-13
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH-VDAEYREFTL 85
           P  V  I  +     S+S+LW+       II  Y + Y ++ ++ QS   + A     T+
Sbjct: 11  PSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATV 70

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQ 122
           + LK GT Y   ++   S G  + S+ +   T     
Sbjct: 71  SGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSG 107

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 23  TILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAE 79
           +  S    P N+ L S T  S+ + W P       + HY ++Y         +SV V   
Sbjct: 3   SGSSGRSPPSNLALASETPDSLQVSWTPPLG---RVLHYWLTYAPASGLGPEKSVSVPGA 59

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA 115
               TL  L+  T Y++ +  + + G S+       
Sbjct: 60  RSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQ 95

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTL 85
           P   N+++   T  S+ + W            +++ Y+  ++  +  ++ V    R + L
Sbjct: 3   PAPKNLVVSEVTEDSLRLSWTAPDAA---FDSFMIQYQESEKVGEAINLTVPGSERSYDL 59

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
           T LK GT Y ++I  V     S P  +   +T G 
Sbjct: 60  TGLKPGTEYTVSIYGVKGGHRSNPL-SAEFTTGGH 93

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 3/94 (3%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFT 84
             P    + L       I   W P      +I  YIV Y    ++ W S    + +    
Sbjct: 9   DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRAASNF--TE 66

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           +  L   T Y + +  V S G    S + + +T 
Sbjct: 67  IKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTI 100

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 62.1 bits (151), Expect = 3e-13
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYRE 82
           S   VP  + +   T  S+ I W   Y     + +Y ++Y +   D   Q   V   Y  
Sbjct: 6   SVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYST 65

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPS 110
            T++ LK G  Y I +   ++       
Sbjct: 66  ATISGLKPGVDYTITVYAYDTFFPGYEP 93

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 62.7 bits (153), Expect = 3e-13
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYRDRTEDWQS 73
           +T+++   VP     N+ L+   + SI + W P       G  IT Y + +R  T   + 
Sbjct: 19  ITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG-FITGYKIRHRKTTRRGEM 77

Query: 74  VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
             ++     +  T L+ G+ Y   +  +   G   PS    A T  E+
Sbjct: 78  ETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP-EN 124

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 23/169 (13%), Positives = 51/169 (30%), Gaps = 34/169 (20%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
                ++ +   T  ++S+ W+      A    Y ++Y   +     + +  +   F L 
Sbjct: 7   LDNPKDLEVSDPTETTLSLRWRRP---VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILR 63

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAAST-------KGEDQTD------W-------- 125
            L  GT Y I++       +SKP+    ++           D T+      W        
Sbjct: 64  GLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSPKGISFSDITENSATVSWTPPRSRVD 123

Query: 126 ---INIPLSNLDEALEMPL-------VIENLLPATRYELTISAKNDAGS 164
              ++           + +        +  L+P   Y + I +      
Sbjct: 124 SYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEE 172

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 62.8 bits (153), Expect = 1e-12
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-QSVHVDAE 79
             T++  P    I     T +S ++ W P     + +  Y VSY   T      V VD  
Sbjct: 91  GSTVVGSPK--GISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTPNVVTVDGS 145

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
                L +L  G  Y +NI  V    ES+P   I 
Sbjct: 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGIL 180

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREF 83
           S     +  +   T  S  + W  + D    ++ + V Y   +  ++ Q + + +     
Sbjct: 5   SHLVATSESVTEITASSFVVSWVSASDT---VSGFRVEYELSEEGDEPQYLDLPSTATSV 61

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            +  L  G  Y +N+  ++  GE     + + +T
Sbjct: 62  NIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 62.0 bits (151), Expect = 5e-13
 Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHV-DA 78
                 P  P  ++  +    S+ + W+        +  Y V Y+     +   +++ + 
Sbjct: 12  RLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCER-PLQGYSVEYQLLNGGELHRLNIPNP 70

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI 113
                 +  L     Y   ++  +  G  +  + +
Sbjct: 71  AQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGV 105

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 64.8 bits (158), Expect = 5e-13
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
                ++++ +++  SIS++W  +      I HY +++   +     V V  +   +TLT
Sbjct: 197 LDSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSGISSEVTVPRDRTSYTLT 253

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            L+ G  Y I+I       +S  S T+ A T
Sbjct: 254 DLEPGAEYIISITAERGRQQSLES-TVDAFT 283

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 59.1 bits (143), Expect = 6e-11
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 41/188 (21%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR----DRTEDWQSVHV 76
             T +  P   N+ + S T  S+ + W  S    A    Y V Y     ++  +      
Sbjct: 101 FTTEIDAP--KNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKG 155

Query: 77  DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST--------KGEDQT-DWIN 127
                + TLT L  GT Y + I  V +  +S P+ T+ A T             +   I+
Sbjct: 156 IGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA-TMNARTELDSPRDLMVTASSETSIS 214

Query: 128 I-----------------PLSNLDEALEMP-----LVIENLLPATRYELTISAKNDAGST 165
           +                 P S +   + +P       + +L P   Y ++I+A+     +
Sbjct: 215 LIWTKASGPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQS 274

Query: 166 NKNYVFAT 173
            ++ V A 
Sbjct: 275 LESTVDAF 282

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 26/183 (14%), Positives = 56/183 (30%), Gaps = 47/183 (25%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDA 78
            + ++  P    IL++  +     + W P       +   ++ Y          +  +  
Sbjct: 11  GIPVIDGPT--QILVRDVSDTVAFVEWTPPRAK---VDFILLKYGLVGGEGGKTTFRLQP 65

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA----------------------- 115
              ++++  L+ G+ Y+++I  V    ES  S T                          
Sbjct: 66  PLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRTATSLDLEW 125

Query: 116 --------------STKGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKND 161
                         ST   +Q   + +P             + +L+P T Y + ISA  +
Sbjct: 126 DNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTK---TTLTDLVPGTEYGVGISAVMN 182

Query: 162 AGS 164
           +  
Sbjct: 183 SKQ 185

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 60.9 bits (148), Expect = 8e-13
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           L  P    I ++  T  +  I W P       +  + ++Y   D   D  ++ +  +  +
Sbjct: 3   LDAPS--QIEVKDVTDTTALITWMPP---SQPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
           +++  LK  T Y++++        S P+K   
Sbjct: 58  YSIGNLKPDTEYEVSLISRRGDMSSNPAKETF 89

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 11/110 (10%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYR--DRTEDW 71
           V + +   VP     N+ L+   + SI I W+P   +   G  IT Y + YR   R  D 
Sbjct: 9   VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNG-QITGYKIRYRKASRKSDV 67

Query: 72  QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
               V        +  L  GT Y   +  +   G    +  ++A T   D
Sbjct: 68  TETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 117

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDR-TEDWQSVHVD-AEYRE 82
            PPG P  L  + T H++++ W  P Y GG  IT YIV  RD     W   +       E
Sbjct: 12  DPPGKPVPL--NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 69

Query: 83  FTLTQLKCGTHYKINIKLVNSIGE----SKPSKTIAASTKGE 120
           FT++ L     Y+  +   N+ G     S+PS  I      E
Sbjct: 70  FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR---DRTEDWQS 73
             I S    P      + ++  ++  IS+ W+   +   I+  Y + Y    D+ E    
Sbjct: 9   AVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEK--IVESYQIRYWAAHDKEEAANR 66

Query: 74  VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           V V ++     L  L   T Y I +   NS G   PS  I A TK
Sbjct: 67  VQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTK 111

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 62.5 bits (152), Expect = 3e-12
 Identities = 31/183 (16%), Positives = 53/183 (28%), Gaps = 49/183 (26%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSVHVDAEYREFT 84
             G P N   ++  +  I   W P          Y V Y      + ++  +D++     
Sbjct: 5   DLGAPQNPNAKAAGSRKIHFNWLP---PSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVE 61

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST--------------------------- 117
           LT L     Y++ +    + GE   S  ++  T                           
Sbjct: 62  LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAE 121

Query: 118 -----------------KGEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKN 160
                              +D      +    +D      L+IENL  +  Y  T+ A+N
Sbjct: 122 PAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARN 181

Query: 161 DAG 163
            AG
Sbjct: 182 GAG 184

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 60.9 bits (148), Expect = 8e-12
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTED------ 70
           V+  +   VP     +     ++    + W  P+   G  IT Y V Y    +D      
Sbjct: 90  VSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGP 148

Query: 71  -WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQ 122
             + +  + + R   +  L+    Y+  +K  N  G     + I        +
Sbjct: 149 MKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 24  ILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYR 81
           +L PP   NI + + T  +  + W+P       I   +V++   +   D  +V + +   
Sbjct: 1   MLQPPF--NIKVTNITLTTAVVTWQPPI---LPIEGILVTFGRKNDPSDETTVDLTSSIT 55

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
             TLT L+  T Y+I I   N    S P  T
Sbjct: 56  SLTLTNLEPNTTYEIRIVARNGQQYSPPVST 86

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 59.0 bits (143), Expect = 5e-12
 Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 6/97 (6%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQSVHVDAEYR 81
           + L+PP   ++     +  +  + W+ +      +    V+Y                  
Sbjct: 6   SGLAPPR--HLGFSDVSHDAARVFWEGAPRP---VRLVRVTYVSSEGGHSGQTEAPGNAT 60

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
              L  L   T Y + +  +   G S        + K
Sbjct: 61  SAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKK 97

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 59.1 bits (143), Expect = 5e-12
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 7/107 (6%)

Query: 6   TCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR 65
           +   D+    +++Y+Q ++   P    + + + T  S+ I W         + +Y ++Y 
Sbjct: 10  SDYKDDDDKGENLYFQGSVSDVPT--KLEVVAATPTSLLISWDAPAVT---VRYYRITYG 64

Query: 66  --DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
                   Q   V       T++ LK G  Y I +  V  +      
Sbjct: 65  ETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAG 111

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 59.2 bits (143), Expect = 7e-12
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 15/102 (14%)

Query: 22  VTILSPPGVPNILLQ--STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE 79
           +  L+ P  P+I  +  + +  +I++ W    D    I+ Y + Y   T     + +   
Sbjct: 10  LDYLTAPNPPSIREELCTASHDTITVHWIS--DDEFSISSYELQYTIFTGQANFISLYNS 67

Query: 80  YR-----------EFTLTQLKCGTHYKINIKLVNSIGESKPS 110
                         +T+  L+ GT Y   +K +N  G     
Sbjct: 68  VDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSE 109

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 58.2 bits (141), Expect = 9e-12
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEY 80
           ++ S P    + + + T  S+ I W  S      +++Y ++Y         Q   V    
Sbjct: 3   SVSSVPT--KLEVVAATPTSLLISWDASSSS---VSYYRITYGETGGNSPVQEFTVPGSS 57

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPS 110
              T++ L  G  Y I +    S  +   S
Sbjct: 58  STATISGLSPGVDYTITVYAYYSYYDLYYS 87

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 58.7 bits (142), Expect = 1e-11
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 26  SPPGVP-NILLQSTTTHSISILWK----PSYDGGAIITHYIVSYRDR-TEDWQSVHVDAE 79
           +P   P  +   + T  ++ + W     P     + +  Y V +R   +   +    D  
Sbjct: 17  TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTT 76

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
              +T T LK  T Y+ ++ +  +   S  S T  A+T 
Sbjct: 77  SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTY 115

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 58.2 bits (141), Expect = 1e-11
 Identities = 15/102 (14%), Positives = 31/102 (30%), Gaps = 6/102 (5%)

Query: 23  TILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE 82
           +    P    +   + T     + WKP       +  Y +                   +
Sbjct: 6   SGPDGPT--QLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVD 60

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTD 124
           + L  L   T+Y   ++ +     + P+ +I  +T  E   D
Sbjct: 61  YPLHDLVLHTNYTATVRGLRGPNLTSPA-SITFTTGLEAPRD 101

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           L PP    + L + T  ++ + W+PS    A  THY+V         + +   V     E
Sbjct: 9   LPPPR--ALTLAAVTPRTVHLTWQPS----AGATHYLVRCSPASPKGEEEEREVQVGRPE 62

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
             L  L+ G  Y+++++ +     S+     A
Sbjct: 63  VLLDGLEPGRDYEVSVQSLRGPEGSEARGIRA 94

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 57.2 bits (138), Expect = 3e-11
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 26  SPPGVP-NILLQSTTTHSISILWK----PSYDGGAIITHYIVSYRDR-TEDWQSVHVDAE 79
            P   P  +     +  +I I W     P +       +Y V ++     + +  + +A 
Sbjct: 7   GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANAT 66

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
              + +T LK  T Y+ ++ +      S  S T   +T
Sbjct: 67  TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 104

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 57.0 bits (138), Expect = 4e-11
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYR------DR 67
             I +    P     ++ LQ  T+ SI + WK        G +I  Y + YR      + 
Sbjct: 6   SGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNG-VIRGYQIGYRENSPGSNG 64

Query: 68  TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
                 +    +   +TL  LK    Y + ++  N  G    S  I A+T 
Sbjct: 65  QYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 115

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 60.3 bits (145), Expect = 5e-11
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 5/96 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED----WQSVHVDAEYR 81
           +   V  +  +    + + ++W+   +   +I  Y VSYR   ++      +    A  R
Sbjct: 792 ADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALER 851

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
              L  L  G  Y + I+  +  G    ++      
Sbjct: 852 GCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYV 886

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 51.1 bits (121), Expect = 5e-08
 Identities = 34/193 (17%), Positives = 56/193 (29%), Gaps = 49/193 (25%)

Query: 17  DIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH 75
           DI Y  T  + P VP + +  S ++  I + WKP  D    ITHY+V +  + ED +   
Sbjct: 584 DIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFE 643

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK----GEDQTDWINIPLS 131
           +D                +    +  +S   ++     +A         D      +  S
Sbjct: 644 LD----YCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEES 699

Query: 132 NLDEALEMPL----------------------------------------VIENLLPATR 151
           +  +  E  L                                        VI  L   T 
Sbjct: 700 SFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTG 759

Query: 152 YELTISAKNDAGS 164
           Y + + A N    
Sbjct: 760 YRIELQACNQDTP 772

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 56.2 bits (136), Expect = 5e-11
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 27  PPGVP-NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE 82
           P G P N+ +   TT +  + W P   +   G  I  Y V +RD     +  ++  +   
Sbjct: 8   PSGFPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQNITTDT-R 65

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           FTLT LK  T Y I ++   S G    S +I + T
Sbjct: 66  FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 56.1 bits (135), Expect = 7e-11
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 6/93 (6%)

Query: 28  PGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFT 84
             VP ++ + + T  S+ I W           +Y ++Y         Q   V       T
Sbjct: 4   SDVPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNSPVQEFTVPGPVHTAT 60

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           ++ LK G  Y I +  V               +
Sbjct: 61  ISGLKPGVDYTITVYAVTDHKPHADGPHTYHES 93

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 55.5 bits (134), Expect = 8e-11
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           +  P    +        SI I W+        ++ Y V+Y   +          D E   
Sbjct: 2   IDRP--KGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDT 56

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             L  L+ G+ Y +++  ++   ES+P     ++ 
Sbjct: 57  AELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 59.5 bits (144), Expect = 8e-11
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 26  SPPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTED-WQSVHVDAEYREF 83
            PP  P I        ++ + WK P+ DGG+++T+Y +  R+     W      + Y   
Sbjct: 11  EPPRFPIIENILDE--AVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPC-AKSRYTYT 67

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQ 122
           T+  L+ G  Y+  I   N  G+SKP +  A      D+
Sbjct: 68  TIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDE 106

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 56.6 bits (137), Expect = 8e-11
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYR----DRTE 69
           +   +    P      ++  S  + ++ + W P       G +IT Y V+Y     +   
Sbjct: 9   IEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNG-VITQYSVAYEAVDGEDRG 67

Query: 70  DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
                 +  E+  + L  L+  T Y++ ++    +G    S  +   T 
Sbjct: 68  RHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTD 116

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 55.8 bits (134), Expect = 1e-10
 Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 12/117 (10%)

Query: 14  GKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKP---------SYDGGAIITHYIVSY 64
           G ++      +LS    P          ++ + W P                +  Y V  
Sbjct: 7   GDEETKAFEALLSNIVKPVA--SDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLI 64

Query: 65  RDRTEDWQ-SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
               +D +       E    TL  LK    Y   ++   +  +  PS+    +T   
Sbjct: 65  SSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 55.1 bits (133), Expect = 2e-10
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR---DRTEDWQS 73
           V   +    P     ++  +  ++ +I + WK   +    I  Y V Y     +  +   
Sbjct: 9   VLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWM 68

Query: 74  VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
            H  A+ +  T+  L     Y + +    SIG+   S  I   T+
Sbjct: 69  KHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQ 113

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 15/113 (13%), Positives = 38/113 (33%), Gaps = 17/113 (15%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD----------RTED 70
             +  S P +  + +   TT S+ + W+           +++ +            R   
Sbjct: 3   SGSSGSRPRLSQLSVTDVTTSSLRLNWEAPPGA---FDSFLLRFGVPSPSTLEPHPRPLL 59

Query: 71  WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS----KTIAASTKG 119
            + + V        L  L+ GT Y + +  +    ++       +T++  + G
Sbjct: 60  QRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGPSSG 112

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 53.6 bits (129), Expect = 5e-10
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 4/92 (4%)

Query: 27  PPGVPNILLQSTTTHSISILWKPS-YDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
                ++ L       + + W  S          Y +   ++ E+W  + ++       L
Sbjct: 10  SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPRV---LL 66

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           T+L+  T Y + ++ +  +G    S      T
Sbjct: 67  TKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 98

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 53.7 bits (129), Expect = 6e-10
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 7/103 (6%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-----DRTEDWQSVHVDA- 78
           L    V        T  ++ + W         I  Y V YR       T  WQ++     
Sbjct: 14  LGDVLVRLHNPVVLTPTTVQVTWTVD-RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVP 72

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
             R   L  LK G  Y+I ++   +  +   S++    T  E 
Sbjct: 73  TERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 18/114 (15%)

Query: 22  VTILSPPGVP-----NILLQSTTTHSISILWKP---SYDGGAIITHYIVSYR-------- 65
            +  S   +P     N+ +    +    + W P       G  +  Y + Y         
Sbjct: 5   SSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG-HLQGYRIYYWKTQSSSKR 63

Query: 66  -DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
             R  + + +          L  L+  +HY +N+++VN  GE   S     +T 
Sbjct: 64  NRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP 117

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 20  YQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSV---H 75
                 +PP   +++     +  + + W        II  Y + YR      W  +    
Sbjct: 195 VYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPED 254

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAASTKGEDQ 122
             +    FT+  LK  T Y   I+ +   G+   S  S+  +  T  ED+
Sbjct: 255 TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY-EDR 303

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 51.0 bits (121), Expect = 4e-08
 Identities = 21/207 (10%), Positives = 48/207 (23%), Gaps = 49/207 (23%)

Query: 5   YTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVS 63
              L      ++     +    PP  P N+         +   W    +   + T++ + 
Sbjct: 81  CNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLK 139

Query: 64  YRDRTEDWQ--SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST---- 117
               T  +       D               + ++ ++  N++G+               
Sbjct: 140 SEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK 199

Query: 118 ----------------------------------------KGEDQTDWINIPLSNLDEAL 137
                                                   + +D + W  IP  +     
Sbjct: 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTR 259

Query: 138 EMPLVIENLLPATRYELTISAKNDAGS 164
                +++L P T Y   I    + G 
Sbjct: 260 SS-FTVQDLKPFTEYVFRIRCMKEDGK 285

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 20  YQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-WQSV---H 75
                 +PP   +++     +  + + W        II  Y + YR +    W  +    
Sbjct: 99  VYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPED 158

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAASTK 118
             +    FT+  LK  T Y   I+ +   G+   S  S+  +  T 
Sbjct: 159 TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 204

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 27  PPGVPNILLQSTTTHSISILWKP--SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           P   P  ++ + T   + + W+   + +  + +T Y V YR  +++   V      +   
Sbjct: 18  PSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTN--KTSA 75

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              L     Y I +K     G+   S+ I        
Sbjct: 76  ELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 47.9 bits (113), Expect = 5e-07
 Identities = 30/218 (13%), Positives = 62/218 (28%), Gaps = 65/218 (29%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVPNIL-LQSTTTHSISILWKPSYDGGAIITHYI 61
           GNY+C      G+      + +  PP  P +   + +   ++   W P      + T  +
Sbjct: 73  GNYSCYRA---GRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRSTPS-LTTKAV 128

Query: 62  VSYR--------DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI 113
           +  R        D  E  Q      ++           + Y +++ + +S+G SK SKT 
Sbjct: 129 LLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVG-SKFSKTQ 187

Query: 114 AAST-----------------------------------------------KGEDQTDWI 126
                                                              + E    + 
Sbjct: 188 TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFT 247

Query: 127 NIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGS 164
              + +    L+   VI +     R+ + + A+ + G 
Sbjct: 248 TWMVKD----LQHHCVIHDAWSGLRHVVQLRAQEEFGQ 281

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 44.9 bits (105), Expect = 5e-06
 Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 26  SPPGVPNILLQSTTTHSISILWKP--SYDGGAIITHYIVSYR-DRTEDWQSVHVDAEYRE 82
            PP    +   +     +S+ W+   S++       + + YR +R++ + +  V      
Sbjct: 198 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHH 257

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSK 111
             +     G  + + ++     G+ + S+
Sbjct: 258 CVIHDAWSGLRHVVQLRAQEEFGQGEWSE 286

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 13/112 (11%)

Query: 22  VTILSPPGVP-----NI-LLQSTTTHSISILWKP---SYDGGAIITHYIVSYRDRTEDWQ 72
           +   +  G P     N+ +  + ++ ++ I W         G  +  Y +S+  ++    
Sbjct: 9   ILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDG-ELVGYRISHVWQSAGIS 67

Query: 73  S---VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
                 V        ++         + I  V   G    S  +        
Sbjct: 68  KELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 46.9 bits (110), Expect = 8e-07
 Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 5/99 (5%)

Query: 20  YQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE 79
                +    V +         ++++ W        +  + +  Y+D     +   +  +
Sbjct: 144 GTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYIL--YKDGK---KVAEIGKD 198

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
              +T  +L   T Y   I    S GE    +++   T 
Sbjct: 199 ETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 22/208 (10%), Positives = 44/208 (21%), Gaps = 48/208 (23%)

Query: 4   NYTCLADNIFGKDDIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSYDG---GAIITH 59
           +           +     +    PP  P  +  ++     I   W P       G   T 
Sbjct: 258 SSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATS 317

Query: 60  YIVSYRDRTED---WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS 116
           Y +      +     ++     E  +     L     Y   +   N +G S+ +  +  +
Sbjct: 318 YTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNIT 377

Query: 117 T-----------------------------------------KGEDQTDWINIPLSNLDE 135
                                                     K  +             E
Sbjct: 378 EKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVE 437

Query: 136 ALEMPLVIENLLPATRYELTISAKNDAG 163
                + ++ L P T Y   I    +  
Sbjct: 438 NSSYLVALDKLNPYTLYTFRIRCSTETF 465

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 45.2 bits (106), Expect = 4e-06
 Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 10/125 (8%)

Query: 4   NYTCLADNIFGKDDIYYQVTILS--PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHY 60
           N+T  A N  G+      V I     P  P +  ++   + ++ + W    +   I    
Sbjct: 356 NFTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLC 415

Query: 61  IVSYRDR-----TEDWQSVHVDAEYREFTLTQLKCGTHYKINI--KLVNSIGESKPSKTI 113
            +  +         +     V+       L +L   T Y   I          SK S   
Sbjct: 416 EIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKK 475

Query: 114 AASTK 118
              T 
Sbjct: 476 QHLTT 480

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} Length = 104

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
              V ++   + +  S++++WK S +  +    Y +     T+   S +++       + 
Sbjct: 8   AIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD---SSNLNVSEPRAVIP 64

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQ 122
            L+  T Y I +  V    E  P   +   T     
Sbjct: 65  GLRSSTFYNITVCPVLGDIEGTPG-FLQVHTPPVPS 99

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} Length = 103

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 24  ILSPPGVPNIL--LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAE 79
           ++S P  P  L  +  ++ ++ ++ W  +         Y V  R       + ++  +  
Sbjct: 1   MVSAPAFPTGLSAVLDSSGNTANLTWNAAPG----ANSYNV-KRSTKSGGPYTTIATNIT 55

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
              +T T +  GT Y   +  V++  E+  S       
Sbjct: 56  STNYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 16/115 (13%)

Query: 19  YYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIIT------HYIVSYRDRTEDWQ 72
                 L PP         + + S  I        G           Y + + + T + +
Sbjct: 304 TEIQAFLLPPVFN----IRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAE 359

Query: 73  SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG----ESKPSKTIAASTKGEDQT 123
              +  +  + T+  LK  T Y +  +           S  S  +   TK    T
Sbjct: 360 -RKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTK-PGNT 412

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 17/164 (10%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ--SVHVDA 78
           +  +L+  G   +L  +     +   W+ +   G     Y  SY+   E W+   +H   
Sbjct: 15  KAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEPWKLCRLHQAP 74

Query: 79  EYRE-------FTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLS 131
             R                    ++ +   +          I      +       +   
Sbjct: 75  TARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLDAPV---GLVAR 131

Query: 132 NLDEALEM-----PLVIENLLPATRYELTISAKNDAGSTNKNYV 170
             DE+  +     P     +    RYE+ +SA   AGS  +  +
Sbjct: 132 LADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEI 175

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 Length = 88

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
            P  P N+   + TT SI++ W  S D    +T Y V Y   T    +V         T+
Sbjct: 3   APTAPTNLASTAQTTSSITLSWTASTDNVG-VTGYDV-YNG-TALATTVTGTT----ATI 55

Query: 86  TQLKCGTHYKINIKLVNSIG-ESKPSKTIAAST 117
           + L   T Y   +K  ++ G  S  S  ++  T
Sbjct: 56  SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITH--YIVSYRDRTEDWQSVH---VDAE 79
           L  P   ++ +    TH  +I W+ S        H  +          W+      +  +
Sbjct: 106 LMAP--ISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQK 163

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGE----SKPSKTIAASTK 118
                L  L   T Y+  +++    GE    S  S+ +A  TK
Sbjct: 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTK 206

>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X Length = 103

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGV 30
           G+YT +A N +GKD+       +  PG+
Sbjct: 75  GDYTLIAKNEYGKDEKQISAHFMGWPGI 102

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 30/207 (14%), Positives = 65/207 (31%), Gaps = 40/207 (19%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSV----HVDAE 79
           L  P   NI   S    ++ + W P      +   Y V Y     + W +     +++  
Sbjct: 9   LPKP--ANITFLSINMKNV-LQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRT 65

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKT---------------IAASTKGEDQTD 124
           Y + +         Y   ++ +     SK +++               +A +T  +  + 
Sbjct: 66  YCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISV 125

Query: 125 WINIPLSNLDEALEMPLVIENLLPATRYELTI-----SAKNDAGSTNKNYVFATLSVNGG 179
            +  P        ++P+ ++ +    +Y +++     +       TN   V   L  N  
Sbjct: 126 VLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTL 185

Query: 180 -----KAFHS-------WSPIQVHTTL 194
                ++F          S  Q   TL
Sbjct: 186 YCVHVESFVPGPPRRAQPSEKQCARTL 212

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 40.4 bits (93), Expect = 2e-04
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 9/100 (9%)

Query: 27  PPGVPNILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDWQSVHVD--AEYREF 83
               P++ +      S S+ W+        I   + + YR  T  W+    +        
Sbjct: 321 QMAPPSLQVTKDGD-SYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSM 379

Query: 84  TLTQLKCGTHYKINI--KLVNSIGE---SKPSKTIAASTK 118
            L  L+  T Y   +  +   +      S+ S+  +  T+
Sbjct: 380 ALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDTE 419

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 8/101 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSV----HVDAE 79
              P    +  QS   H+I + W+P        + Y V Y+      W++          
Sbjct: 8   SLKP--QRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQEL 64

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             + T         Y   ++  ++   S+ S T   +   E
Sbjct: 65  SCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWE 105

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X Length = 126

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSIS 44
           GNYT LA N FG+         +  P   N       T+S S
Sbjct: 76  GNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTS 117

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4 Length = 118

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 3   GNYTCLADNIFGKDDIYYQVTILSPPGVPN 32
           GNYT +A N  G  +       L  P   +
Sbjct: 78  GNYTLIAKNPLGTANQTINGHFLKEPFPVD 107

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 37.8 bits (87), Expect = 9e-04
 Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 6/110 (5%)

Query: 17  DIYYQVTILSPPGVP-NILLQSTTTHSISILWKPSY----DGGAIITHYIVSYRDRTEDW 71
           D+ Y V    P  +   +         + I W P        G     Y +  +      
Sbjct: 96  DVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE 155

Query: 72  QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAASTKGE 120
             +H   +  EF +  L  G  Y + ++     G  S  S         +
Sbjct: 156 WEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSD 205

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	197
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	99.93
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	99.89
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.89
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.88
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.86
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.85
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.85
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.84
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.83
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	99.82
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.82
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.81
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.81
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	99.81
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	99.81
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.8
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	99.8
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	99.79
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	99.78
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	99.78
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	99.78
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.78
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	99.78
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.77
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.76
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	99.76
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	99.76
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	99.75
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	99.74
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	99.72
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	99.71
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	99.7
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	99.69
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	99.68
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	99.68
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	99.68
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	99.67
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	99.66
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	99.66
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.66
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	99.65
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.65
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	99.65
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.64
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	99.64
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	99.64
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	99.64
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	99.64
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	99.63
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	99.63
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	99.63
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	99.63
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	99.63
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	99.63
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	99.62
2crz_A	110	Fibronectin type-III domain containing protein 3A;	99.62
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.62
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.61
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	99.61
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	99.61
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	99.61
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	99.6
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	99.6
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	99.6
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	99.6
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	99.6
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	99.59
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	99.59
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	99.59
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	99.59
2crm_A	120	Fibronectin type-III domain containing protein 3A;	99.59
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	99.58
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	99.58
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	99.58
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	99.58
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	99.57
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.57
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	99.57
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	99.57
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	99.57
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	99.56
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	99.56
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.56
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.55
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	99.55
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	99.54
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.54
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	99.54
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	99.54
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.54
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.54
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.54
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	99.54
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	99.53
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.53
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	99.53
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.52
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	99.52
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	99.52
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.51
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.51
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	99.51
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	99.51
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.5
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	99.5
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	99.5
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	99.49
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.49
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	99.48
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	99.48
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.47
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.47
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	99.46
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.46
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	99.46
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.46
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.45
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.45
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	99.45
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.44
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	99.43
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	99.42
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	99.42
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.42
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	99.42
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.41
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.41
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	99.39
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	99.39
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.38
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	99.38
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.36
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	99.36
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	99.36
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	99.35
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	99.35
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	99.35
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	99.35
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	99.33
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.32
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.31
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.3
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.3
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	99.28
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	99.28
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.25
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	99.2
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	99.19
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.18
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	99.17
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.17
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	99.17
1oww_A	98	FN, fibronectin first type III module, CIG; fibron	99.09
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.09
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	99.09
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	99.09
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	99.06
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	99.05
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	99.05
2erj_C	247	Cytokine receptor common gamma chain; immune syste	99.03
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	99.02
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.01
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	98.98
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	98.97
1q38_A	89	Fibronectin; amyloid fibril, anastellin, extracell	98.96
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	98.93
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	98.92
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	98.92
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	98.91
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	98.89
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	98.86
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	98.86
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	98.84
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	98.82
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	98.8
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	98.78
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	98.74
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	98.71
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	98.7
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	98.69
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	98.68
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	98.67
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	98.67
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	98.66
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	98.65
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	98.64
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	98.64
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	98.61
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	98.58
2crz_A	110	Fibronectin type-III domain containing protein 3A;	98.57
2crm_A	120	Fibronectin type-III domain containing protein 3A;	98.56
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	98.55
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	98.55
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	98.53
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	98.53
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	98.52
1wft_A	123	1700129L13RIK protein; FN3 domain, similar to HOST	98.52
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	98.52
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	98.51
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	98.51
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	98.5
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	98.5
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	98.5
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	98.48
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	98.48
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	98.45
1ugn_A	198	LIR1, leukocyte immunoglobulin-like receptor 1; im	98.45
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	98.44
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	98.44
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	98.44
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	98.44
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	98.44
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	98.43
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	98.43
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.43
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	98.42
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	98.41
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	98.41
4fa8_A	203	Secreted protein BARF1; immunoglobulin-like domain	98.4
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	98.4
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	98.39
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	98.39
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	98.39
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	98.39
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	98.39
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	98.39
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	98.37
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	98.37
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	98.35
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	98.34
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	98.34
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	98.33
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	98.33
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	98.31
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	98.3
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	98.3
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	98.29
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	98.29
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	98.29
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	98.29
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	98.29
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	98.28
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	98.27
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	98.27
3p2t_A	196	Leukocyte immunoglobulin-like receptor subfamily 4	98.26
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	98.25
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	98.25
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	98.24
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	98.23
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	98.23
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	98.23
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	98.22
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	98.22
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	98.2
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	98.19
1oll_A	188	NK receptor; immune system/receptor, NK cell trigg	98.18
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	98.18
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	98.18
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	98.18
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	98.18
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	98.16
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	98.14
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	98.13
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	98.13
2d3v_A	196	Leukocyte immunoglobulin-like receptor subfamily A	98.13
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	98.12
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	98.12
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	98.12
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	98.12
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.11
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	98.11
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	98.09
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.09
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	98.08
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	98.07
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	98.06
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	98.06
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	98.06
1uct_A	218	Immunoglobulin alpha FC receptor; beta stands, imm	98.06
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	98.06
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	98.05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	98.05
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	98.04
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	98.04
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	98.04
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	98.04
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	98.03
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	98.03
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	98.03
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	98.02
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	98.02
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	98.02
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	98.0
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	97.99
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	97.98
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	97.98
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	97.98
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	97.97
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	97.97
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	97.97
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	97.96
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	97.96
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	97.96
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	97.96
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	97.95
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	97.95
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	97.95
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	97.94
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	97.94
2gi7_A	184	GPVI protein; IG-like domains, blood clotting, cel	97.93
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	97.93
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	97.92
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	97.92
1p6f_A	242	NKP46, natural cytotoxicity triggering receptor 1;	97.91
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	97.91
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	97.91
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	97.9
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	97.9
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	97.88
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	97.86
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	97.85
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	97.85
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	97.85
2erj_C	247	Cytokine receptor common gamma chain; immune syste	97.84
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	97.84
1dr9_A	201	B7-1 (CD80), T lymphocyte activation antigen; IG s	97.83
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	97.83
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	97.81
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	97.81
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	97.8
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	97.8
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	97.8
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	97.79
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	97.79
4f80_A	226	Butyrophilin subfamily 3 member A1; B7 superfamily	97.78
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	97.78
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	97.77
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	97.77
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	97.76
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	97.76
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	97.76
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	97.75
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	97.74
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	97.74
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	97.7
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	97.7
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	97.67
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	97.66
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	97.65
3og6_B	226	Interleukin 28 receptor, alpha (interferon, lambd	97.65
3s9d_B	199	Interferon alpha/beta receptor 2; human, type I in	97.64
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	97.64
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	97.63
1oww_A	98	FN, fibronectin first type III module, CIG; fibron	97.63
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	97.6
1nkr_A	201	P58-CL42 KIR; inhibitory receptor, natural killer	97.6
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	97.6
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	97.59
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	97.57
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	97.57
1jbj_A	186	CD3 epsilon and gamma ectodomain fragment complex;	97.55
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	97.55
1he7_A	126	High affinity nerve growth factor receptor; transf	97.54
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	97.53
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	97.5
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	97.5
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	97.5
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	97.49
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	97.48
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	97.47
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	97.46
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	97.45
1b6u_A	257	KIR2DL3, P58 killer cell inhibitory receptor; natu	97.44
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	97.44
2if7_A	193	SLAM family member 6; NTB-A, homophilic receptor,	97.44
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	97.43
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.43
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	97.41
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	97.38
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	97.37
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	97.36
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	97.34
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	97.32
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	97.32
2pet_A	231	Lutheran blood group glycoprotein; immunoglobulin	97.31
1fyh_B	229	Interferon-gamma receptor alpha chain; cytokine-re	97.29
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	97.29
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	97.29
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	97.27
1nqb_A	256	Single-chain antibody fragment; multivalent antibo	97.24
2ghw_B	247	Anti-SARS SCFV antibody, 80R; S protein, neutraliz	97.24
4i0k_A	222	CD276 antigen; immunoglobulin domain, glycoprotein	97.24
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	97.24
3pv7_A	248	B7-H6, IG-like domain-containing protein DKFZP686O	97.23
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	97.22
4hwu_A	95	Fibroblast growth factor receptor 2; FGFR2, KGFR,	97.22
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	97.2
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	97.14
2zg1_A	214	Sialic acid-binding IG-like lectin 5; siglec-5 inh	97.13
3o3u_N	581	Maltose-binding periplasmic protein, advanced Gly	97.1
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	97.08
3tf7_C	256	42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE;	97.06
3umt_A	256	SCFV heavy chain and light chain; stability engine	97.05
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	97.03
1qok_A	282	MFE-23 recombinant antibody fragment; immunoglobul	97.01
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	96.99
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	96.97
1y6k_R	214	Interleukin-10 receptor alpha chain; helix bundle,	96.97
3eow_R	221	Poliovirus receptor; immunoglobulin super family,	96.96
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	96.96
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	96.95
3b4n_A	344	Endo-pectate lyase; pectin, galacturonic acid, rig	96.94
1ccz_A	171	Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.8	96.94
1iam_A	185	ICAM-1, CD54, intercellular adhesion molecule-1; r	96.91
3uzq_A	253	Anti-dengue MAB 4E11; dengue antibody neutralizati	96.91
3juy_B	256	3B3 single chain variant HIV-1 antibody; envelope	96.89
2p1y_A	238	Bispecific alpha/beta TCR; autoimmunity, immunoglo	96.88
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	96.86
4frw_A	218	Poliovirus receptor-related protein 4; immunoglobu	96.84
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	96.84
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	96.84
1f3r_B	257	FV antibody fragment; IG-fold, immuno complex, ant	96.81
3mj8_L	213	Stimulatory hamster antibody HL4E10 FAB light CHA;	96.8
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	96.79
1q38_A	89	Fibronectin; amyloid fibril, anastellin, extracell	96.79
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	96.78
3gkz_A	257	Anti-methamphetamine single chain FV; therapeutic	96.75
2dru_A	180	Chimera of CD48 antigen and T-cell surface antige;	96.71
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	96.7
3d9a_L	213	Light chain of hyhel10 antibody fragment (FAB); ly	96.68
2c1o_A	254	IGK-C protein; FAB fragment, enantioselective, fin	96.67
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	96.63
3auv_A	276	SC-DSFV derived from the G6-FAB; SC-DSFV (disulfid	96.62
3rbg_A	124	Cytotoxic and regulatory T-cell molecule; IGV, crt	96.61
1gsm_A	210	Madcam-1, mucosal addressin cell adhesion molecule	96.59
2xzc_L	216	FAB A.17 light chain; immune system; HET: XOP; 1.3	96.58
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	96.54
3ux9_B	256	SCFV antibody; five helices, long loop connecting	96.54
1moe_A	240	Anti-CEA MAB T84.66; anti carcinoembryonic antigen	96.5
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	96.49
3nl4_L	213	Antigen binding fragment, immunoglobulin IGG - LI;	96.45
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	96.43
4fmk_A	225	Poliovirus receptor-related protein 2; immunoglobu	96.39
1svz_A	247	Immunoglobulin;, single-chain FV fragment 1696; an	96.38
1lk3_L	210	9D7 light chain; antigen-antibody complex, immune	96.28
3bn3_B	196	ICAM-5, intercellular adhesion molecule 5, telence	96.26
1q9r_B	222	S25-2 FAB (IGG1K) heavy chain; antigen-binding fra	96.22
2c1o_A	254	IGK-C protein; FAB fragment, enantioselective, fin	96.19
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	96.15
3d9a_H	210	Heavy chain of hyhel10 antibody fragment (FAB); ly	96.08
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	95.94
1dee_B	223	IGM RF 2A2; FAB-IBP complex 2.7A resolution bindin	95.87
2znx_A	242	SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, s	95.85
1pz5_B	220	Heavy chain of FAB (SYA/J6); antibody-antigen stru	95.84
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	95.8
2gki_A	291	Nuclease; anti-DNA antibody, catalytic antibody, i	95.73
1mq8_A	291	ICAM-1, intercellular adhesion molecule-1, CD54 an	95.72
3esu_F	250	Antibody 14B7* light chain and antibody 14B7* heav	95.66
1sy6_A	204	T-cell surface glycoprotein CD3 gamma/epsilon chai	95.59
1iga_A	475	IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg	95.55
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	95.53
2gjj_A	264	A21 single-chain antibody fragment against ERBB2;	95.4
3s96_B	218	3B5H10 FAB light chain; huntingtin, immune system;	95.38
3fku_X	280	Neutralizing antibody F10; influenza, hemagglutini	95.37
3tv3_L	211	PGT128 light chain, IG lambda-2 chain C regions; F	95.28
1iga_A	475	IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg	95.25
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	95.15
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	95.06
1q0x_L	212	FAB 9B1, light chain; anti-morphine antibody, FAB	94.94
2j6e_L	234	IGM, FAB light chain; autoimmune complex human IGM	94.91
3r06_A	213	Anti-mouse CD3epsilon antibody 2C11 FAB light CHA;	94.89
1igt_B	444	IGG2A intact antibody - MAB231; intact immunoglobu	94.87
1c1e_H	219	Catalytic antibody 1E9 (heavy chain); diels-alder,	94.87
3omz_A	259	Human vdelta1 gamma delta T cell receptor delta1A;	94.85
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	94.8
3sob_L	237	Antibody light chain; beta propeller, protein bind	94.73
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	94.69
2vol_A	207	Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry,	94.68
3knb_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, AT	94.62
3m8o_H	221	Immunoglobulin A1 heavy chain; immunoglobulin fold	94.49
3nl4_H	215	Antigen binding fragment,immunoglobulin IGG - HEA;	94.48
2fbj_H	220	IGA-kappa J539 FAB (heavy chain); immunoglobulin;	94.48
1hzh_H	457	IGG, immunoglobulin heavy chain; antibody, immune	94.44
1fyh_B	229	Interferon-gamma receptor alpha chain; cytokine-re	94.32
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	94.26
3bqu_C	233	3H6 FAB light chain; beta sheet, immune system; 3.	94.26
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	94.15
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	94.0
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	93.97
4gns_A	290	Chitin biosynthesis protein CHS5; FN3, BRCT, tetra	93.97
4go6_A	45	HCF N-terminal chain 1; tandem fibronectin repeat,	93.93
1za6_B	344	IGG heavy chain; immunoglobulin fold, CH2-domain-d	93.9
1igy_B	434	IGG1 intact antibody MAB61.1.3; intact immunoglobu	93.88
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	93.79
2rgs_A	218	I, IG gamma-2B heavy chain; FC-fragment, immunoglo	93.76
1l6x_A	207	Immunoglobulin gamma-1 heavy chain constant regio;	93.68
1mju_H	227	Immunoglobulin MS6-12; catalytic antibody, ester h	93.63
1x9q_A	268	SCFV, 4M5.3 anti-fluorescein single chain antibody	93.57
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	93.56
1op3_H	225	FAB 2G12, heavy chain; domain-swapped FAB 2G12, an	93.49

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=99.93  E-value=4.2e-23  Score=154.67  Aligned_cols=170  Identities=22%  Similarity=0.302  Sum_probs=133.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~   77 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|.+|. +.+......++.|.|.++. +++.++..|.++|+. ....|......
T Consensus       169 d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~  248 (389)
T 2jll_A          169 DFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSH  248 (389)
T ss_dssp             SSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECS
T ss_pred             hCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeecc
Confidence            47999999999999988888899999999996 8888888899999999875 555688899999984 45678876666


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCC--C---------------CCCeeecCCCC--------
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE--D---------------QTDWINIPLSN--------  132 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~--~---------------~~~w~~~~~~~--------  132 (197)
                      .....+.|.+|.+++.|.|+|.|.|..|.+.++....+.+.+.  +               ...|.......        
T Consensus       249 ~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v  328 (389)
T 2jll_A          249 GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIV  328 (389)
T ss_dssp             TTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEE
T ss_pred             CCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCccccccCcCCEEEEEEECCCCCCCcccEEEE
Confidence            6678899999999999999999999999998887776665332  1               23343211000        


Q ss_pred             --------------CcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         133 --------------LDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       133 --------------~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                                    ........++|.+|+|++.|.|+|+|.|..|.|+++..
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~  380 (389)
T 2jll_A          329 KYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY  380 (389)
T ss_dssp             EEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE
T ss_pred             EEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee
Confidence                          00012457899999999999999999999999997643

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=99.89  E-value=3.4e-21  Score=155.22  Aligned_cols=183  Identities=18%  Similarity=0.217  Sum_probs=140.0

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      +.|.|+|.|.|..|. .+..+.+.+..+|.+|. +.+.....+++.|.|.++. +++.++..|.|+|+.....|..... 
T Consensus       234 d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~-  312 (731)
T 2v5y_A          234 DAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP-  312 (731)
T ss_dssp             TCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEE-
T ss_pred             cCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEec-
Confidence            479999999999997 67778899999988776 5666678899999999865 5557899999999977778876653 


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEE--cCCcCCCCCCceEeecCCC-----C-------------CCCeeec---------
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLV--NSIGESKPSKTIAASTKGE-----D-------------QTDWINI---------  128 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~--~~~g~~~~s~~~~~~t~~~-----~-------------~~~w~~~---------  128 (197)
                      .....++|.+|.|++.|.|+|.|.  |..|.+.++..+.+.+...     |             ...|...         
T Consensus       313 ~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~  392 (731)
T 2v5y_A          313 VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHS  392 (731)
T ss_dssp             CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSS
T ss_pred             cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCccccccee
Confidence            345789999999999999999999  9999998887777766432     1             1223221         


Q ss_pred             ----------CCC---------CCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCCCC
Q psy9139         129 ----------PLS---------NLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSW  185 (197)
Q Consensus       129 ----------~~~---------~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p~~  185 (197)
                                ...         .........++|.+|+|++.|.|+|+|.|..|.|+ +..+...+.++.|.+|+.
T Consensus       393 ~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~  467 (731)
T 2v5y_A          393 YNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPT  467 (731)
T ss_dssp             CEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCT
T ss_pred             eeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCc
Confidence                      100         00001256799999999999999999999999985 555666676766665553

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.89  E-value=2.2e-21  Score=133.50  Aligned_cols=153  Identities=20%  Similarity=0.358  Sum_probs=113.8

Q ss_pred             ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEE--EeCCcccEEEECCCCCCCEEEEEE
Q psy9139          24 ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSV--HVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        24 ~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~--~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ++.+|.+|. +.+.. +.+++.|.|.++.++++++.+|.|+++..  .+.|...  .+....+.+.+ +|.|++.|.|+|
T Consensus         2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V   79 (205)
T 1cfb_A            2 VQDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRV   79 (205)
T ss_dssp             CCCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEE
T ss_pred             cccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEE
Confidence            567899997 88888 99999999999987788899999999843  4678643  23455667887 999999999999


Q ss_pred             EEEcCCcCCCCC-CceEeecCCC-----C-------------CCCeeecCC-------------------CCCc------
Q psy9139          99 KLVNSIGESKPS-KTIAASTKGE-----D-------------QTDWINIPL-------------------SNLD------  134 (197)
Q Consensus        99 ~a~~~~g~~~~s-~~~~~~t~~~-----~-------------~~~w~~~~~-------------------~~~~------  134 (197)
                      .|.|..|.+.++ ....+.|...     |             ...|.....                   ....      
T Consensus        80 ~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~  159 (205)
T 1cfb_A           80 IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIF  159 (205)
T ss_dssp             EEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEEC
T ss_pred             EEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEec
Confidence            999999998887 4455555322     1             233433220                   0000      


Q ss_pred             ccccceEEEcCCCCCCeEEEEEEEEcCCCCCC-cceEEEEeeeCC
Q psy9139         135 EALEMPLVIENLLPATRYELTISAKNDAGSTN-KNYVFATLSVNG  178 (197)
Q Consensus       135 ~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~-~~~~~~t~~~~~  178 (197)
                      ......++|.+|.|++.|.|+|+|.|..|.|+ ++..+...+.++
T Consensus       160 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~  204 (205)
T 1cfb_A          160 DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED  204 (205)
T ss_dssp             CTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred             CCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence            01256799999999999999999999999999 566665665543

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.88  E-value=7.8e-21  Score=138.22  Aligned_cols=172  Identities=13%  Similarity=0.144  Sum_probs=119.2

Q ss_pred             CeeEEEEEEeCCCCc---eeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-CcEEEEe
Q psy9139           2 VGNYTCLADNIFGKD---DIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQSVHV   76 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~---~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~   76 (197)
                      .|.|+|.|.|. |..   ...+.+.+..+|.+|. +.+.....+++.|.|.++.+.+. +..|.|+++.... .|.....
T Consensus        76 ~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~~~~~~  153 (303)
T 1i1r_A           76 NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAK  153 (303)
T ss_dssp             EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECC
T ss_pred             ceEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCccCCCc
Confidence            48999999885 533   2345677889999998 88887778999999999876554 4789999984332 2333334


Q ss_pred             CCcccEEEECCC-CCCCEEEEEEEEEcCCcCCCCCCceEee-----cCCCC-----------------------------
Q psy9139          77 DAEYREFTLTQL-KCGTHYKINIKLVNSIGESKPSKTIAAS-----TKGED-----------------------------  121 (197)
Q Consensus        77 ~~~~~~~~i~~L-~p~~~y~~~v~a~~~~g~~~~s~~~~~~-----t~~~~-----------------------------  121 (197)
                      ....+.++|.+| .|++.|.|+|.|.|..|.+.++. ..+.     .+.+|                             
T Consensus       154 ~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~-~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i  232 (303)
T 1i1r_A          154 RDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDH-INFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVII  232 (303)
T ss_dssp             SSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCC-EEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSC
T ss_pred             CCCceEEEECCcCcccccEEEEEEEEcCCCCcccCC-EEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCccc
Confidence            556788999999 99999999999999999764321 1111     01111                             


Q ss_pred             -----------CCCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCc---ceEEEEeeeC
Q psy9139         122 -----------QTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNK---NYVFATLSVN  177 (197)
Q Consensus       122 -----------~~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~---~~~~~t~~~~  177 (197)
                                 ...|..+..... ......|.|.+|.|++.|.|+|+|.|.+|.|+.   +..+...|.+
T Consensus       233 ~~Y~v~y~~~~~~~w~~~~~~~~-~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e  301 (303)
T 1i1r_A          233 LKYNIQYRTKDASTWSQIPPEDT-ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE  301 (303)
T ss_dssp             EEEEEEEEETTCSSCEECCGGGG-CSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred             EEEEEEEEeCCCCCceEEccccC-CCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence                       123333321000 012467999999999999999999999998763   4555555544

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.86  E-value=3.4e-20  Score=130.12  Aligned_cols=156  Identities=21%  Similarity=0.260  Sum_probs=112.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .+|.+|. +.+...+.+++.|.|.++   ++.+.+|.|+|+.. ...+.........+.++|.+|.|++.|.|+|.|.|.
T Consensus         4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   80 (234)
T 3f7q_A            4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGA   80 (234)
T ss_dssp             -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            5788897 889889999999999987   34789999999843 223322233456778999999999999999999999


Q ss_pred             CcCCCCCCceEeecCCCC-----------------CCCeeecCC-----------------CC----------Ccccccc
Q psy9139         104 IGESKPSKTIAASTKGED-----------------QTDWINIPL-----------------SN----------LDEALEM  139 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~~~-----------------~~~w~~~~~-----------------~~----------~~~~~~~  139 (197)
                      .|.+.++..+.+.|....                 ...|.....                 ..          .......
T Consensus        81 ~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (234)
T 3f7q_A           81 QGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNR  160 (234)
T ss_dssp             TEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCC
T ss_pred             CCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcce
Confidence            999988877777765321                 233332111                 00          0001245


Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCCCcceE-EEEeeeCCCcCCCC
Q psy9139         140 PLVIENLLPATRYELTISAKNDAGSTNKNYV-FATLSVNGGKAFHS  184 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~-~~t~~~~~~~~~p~  184 (197)
                      .++|.+|+|++.|.|+|+|.|..|.|+.+.. +...+..+.+..++
T Consensus       161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P  206 (234)
T 3f7q_A          161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIP  206 (234)
T ss_dssp             EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCC
T ss_pred             EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCc
Confidence            7999999999999999999999999997653 44555555554433

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.85  E-value=6.4e-20  Score=126.65  Aligned_cols=151  Identities=18%  Similarity=0.153  Sum_probs=111.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCC----CccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDG----GAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~----~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      .||.+|. +.+...+.+++.|+|.++...    ++.+.+|.|+|+.. ...+.........+.++|.+|.|++.|.|+|+
T Consensus         3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~   82 (211)
T 3p4l_A            3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVM   82 (211)
T ss_dssp             CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEE
Confidence            5778887 888889999999999987522    46789999999843 22333333455677899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecCCC-----C---------------CCCeeecCCCC---C---------------------cc
Q psy9139         100 LVNSIGESKPSKTIAASTKGE-----D---------------QTDWINIPLSN---L---------------------DE  135 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~~~-----~---------------~~~w~~~~~~~---~---------------------~~  135 (197)
                      |.|..|.+.++..+.+.+...     |               ...|.......   .                     ..
T Consensus        83 A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~  162 (211)
T 3p4l_A           83 VTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVV  162 (211)
T ss_dssp             EEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEEE
T ss_pred             EEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEec
Confidence            999999988887777766432     1               23344322100   0                     00


Q ss_pred             cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         136 ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       136 ~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      .....++|.+|.|++.|.|+|+|.|..|.|+.+..+...+.
T Consensus       163 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~  203 (211)
T 3p4l_A          163 GNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP  203 (211)
T ss_dssp             SSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC
T ss_pred             CCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCc
Confidence            12567999999999999999999999999997776655554

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.85  E-value=1.2e-19  Score=125.10  Aligned_cols=150  Identities=17%  Similarity=0.230  Sum_probs=110.6

Q ss_pred             EEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCC-ccccEEEEEEEe-CCCCcEEEEeC----CcccEEEECCCCCCCE
Q psy9139          21 QVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGG-AIITHYIVSYRD-RTEDWQSVHVD----AEYREFTLTQLKCGTH   93 (197)
Q Consensus        21 ~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~-~~i~~y~v~~~~-~~~~~~~~~~~----~~~~~~~i~~L~p~~~   93 (197)
                      .+....+|.+|. +.+...+. ++.|.|.++.+.+ .++.+|.|+|+. ....|......    ...+.+++.+|.|++.
T Consensus         2 ~l~~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   80 (209)
T 2vkw_A            2 PLAQADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT   80 (209)
T ss_dssp             ---CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCE
T ss_pred             CccccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCe
Confidence            355668899997 77776666 7999999986434 459999999984 45678765432    2356899999999999


Q ss_pred             EEEEEEEEcCCcCCCCCCceEeecCCC--C----------------CCCeeecCCCC----------------Cc-----
Q psy9139          94 YKINIKLVNSIGESKPSKTIAASTKGE--D----------------QTDWINIPLSN----------------LD-----  134 (197)
Q Consensus        94 y~~~v~a~~~~g~~~~s~~~~~~t~~~--~----------------~~~w~~~~~~~----------------~~-----  134 (197)
                      |.|+|.|.|..|.+.++....+.|...  |                ...|.......                ..     
T Consensus        81 Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~  160 (209)
T 2vkw_A           81 YAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRL  160 (209)
T ss_dssp             EEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEE
T ss_pred             EEEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceeeec
Confidence            999999999999998888777766433  2                34454431000                00     


Q ss_pred             ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         135 EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       135 ~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ......+++.+|+|++.|.|+|+|.|..|.|+++...
T Consensus       161 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~  197 (209)
T 2vkw_A          161 PSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV  197 (209)
T ss_dssp             CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred             CCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhh
Confidence            0124679999999999999999999999999977654

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.84  E-value=8.9e-20  Score=124.33  Aligned_cols=145  Identities=22%  Similarity=0.443  Sum_probs=108.3

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..+|.+|. +.+...+.+++.|.|.++. +++.++.+|.|+++. ....|..+......+.+.+.+|.|++.|.|+|.|.
T Consensus         3 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~   82 (197)
T 3lpw_A            3 MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAE   82 (197)
T ss_dssp             CCSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEE
T ss_pred             CCCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEE
Confidence            46899997 8888899999999999985 444568999999984 44577777666677899999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCC----CC-------------CCCeeecCCCCC----c-----------------ccccceEEE
Q psy9139         102 NSIGESKPSKTIAASTKG----ED-------------QTDWINIPLSNL----D-----------------EALEMPLVI  143 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~----~~-------------~~~w~~~~~~~~----~-----------------~~~~~~~~i  143 (197)
                      |..|.+.++......+..    .|             ...|........    .                 ......+++
T Consensus        83 ~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~  162 (197)
T 3lpw_A           83 NEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVKVTEATI  162 (197)
T ss_dssp             ETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEESSSEEEE
T ss_pred             cCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeecccccEEEe
Confidence            999988765443222211    11             234443221000    0                 013567999


Q ss_pred             cCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         144 ENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       144 ~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .+|.|++.|.|+|+|.|..|.|+++.
T Consensus       163 ~~L~p~t~Y~~~V~A~n~~G~s~~S~  188 (197)
T 3lpw_A          163 TGLIQGEEYSFRVSAQNEKGISDPRQ  188 (197)
T ss_dssp             CCCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             CCcCCCCEEEEEEEEEeCCccCCCcc
Confidence            99999999999999999999988643

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.83  E-value=1.7e-20  Score=144.86  Aligned_cols=174  Identities=16%  Similarity=0.277  Sum_probs=119.5

Q ss_pred             CeeEEEEEEeCCCCceeEE-EEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCc-cccEEEEEEEe---CCCCcEE--
Q psy9139           2 VGNYTCLADNIFGKDDIYY-QVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGA-IITHYIVSYRD---RTEDWQS--   73 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~-~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~-~i~~y~v~~~~---~~~~~~~--   73 (197)
                      .|.|.|.+.|.+|...... ......+|.+|. + ....+.+++.|+|.+|.+.++ ++..|.|+++.   ..+.|..  
T Consensus       307 ~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl-~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~  385 (536)
T 3fl7_A          307 EGATSCECEEGFFRAPQDPASMPCTRPPSAPHYL-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCE  385 (536)
T ss_dssp             TTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCE-EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECC
T ss_pred             CCccEEEEeccccccCCCccccccccCCCcccce-EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccC
Confidence            5789999999999655432 233346899997 6 456889999999999875444 78999999984   1222211  


Q ss_pred             -------EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC---CCCCceEeecCCCC--------------CCCeeecC
Q psy9139          74 -------VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES---KPSKTIAASTKGED--------------QTDWINIP  129 (197)
Q Consensus        74 -------~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~---~~s~~~~~~t~~~~--------------~~~w~~~~  129 (197)
                             .......+.++|.+|.|++.|.|+|.|.|..|.+   ..+..+.+.|...+              ...|....
T Consensus       386 ~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~pP~  465 (536)
T 3fl7_A          386 ASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPP  465 (536)
T ss_dssp             TTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEEEEECCT
T ss_pred             CCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCCeEEEEEECCc
Confidence                   1123456789999999999999999999999873   34445556654332              34454332


Q ss_pred             CCC-----------------Cc---ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         130 LSN-----------------LD---EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       130 ~~~-----------------~~---~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...                 ..   ......++|.+|+|++.|.|+|+|.|.+|.|+.+..+...|+
T Consensus       466 ~~ng~I~~Y~V~y~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~  532 (536)
T 3fl7_A          466 PQQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTL  532 (536)
T ss_dssp             TTTTTCSEEEEEEEEC--CCCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECC
T ss_pred             CCCCcccEEEEEEEECCCCceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeC
Confidence            100                 00   012467999999999999999999999999997766655554

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=99.82  E-value=3.7e-18  Score=122.75  Aligned_cols=160  Identities=21%  Similarity=0.254  Sum_probs=115.8

Q ss_pred             EEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCc---
Q psy9139           5 YTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAE---   79 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~---   79 (197)
                      +++.|.|..|... .....+..+|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+++.. ...|....+...   
T Consensus        83 ~~V~a~~~~g~s~-~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~  158 (283)
T 1tdq_A           83 VSISAVRGTNESD-ASSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKGIGP  158 (283)
T ss_dssp             EEEEEEETTEECC-CEEEEEECCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEEEECCSSS
T ss_pred             EEEEEECCCCCCC-CeeEEEECCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEEEeCCCCcceEEECCCCCcc
Confidence            4567778777543 44556667888887 8888889999999999876   4688999999853 345555555555   


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC-CCC-------------CCCeeecCCCCCc-----------
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK-GED-------------QTDWINIPLSNLD-----------  134 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~-~~~-------------~~~w~~~~~~~~~-----------  134 (197)
                      ...+++.+|.|++.|.|+|.|.|..|.+.+.. ....+. +.|             ...|.........           
T Consensus       159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t~~~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~  237 (283)
T 1tdq_A          159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT-MNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGI  237 (283)
T ss_dssp             EEEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECCCCCCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSC
T ss_pred             cceEEEecCCCCCEEEEEEEEEeCCCCCcceE-EEecCCCCCCCccEEeEecCCEEEEEEeCCCCcccEEEEEEEcCCCC
Confidence            78899999999999999999999998776532 233332 222             2345432211100           


Q ss_pred             ------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         135 ------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       135 ------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                            ......+.|.+|+|++.|.|+|+|.|..|.|+++.
T Consensus       238 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~  278 (283)
T 1tdq_A          238 SSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST  278 (283)
T ss_dssp             CEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred             eeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence                  02356799999999999999999999999888654

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.82  E-value=2.3e-18  Score=116.56  Aligned_cols=141  Identities=18%  Similarity=0.302  Sum_probs=102.9

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..+|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+|+...+.+....+....+.+++.+|.|++.|.|+|.|.+.
T Consensus         4 ~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   80 (186)
T 1qr4_A            4 GTDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG   80 (186)
T ss_dssp             ----CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred             cCCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence            45788887 8899999999999999874   3678999999866666777777777889999999999999999999998


Q ss_pred             CcCCCCCCceEeecCCCC--------------CCCeeecCCCC--------------Cc----ccccceEEEcCCCCCCe
Q psy9139         104 IGESKPSKTIAASTKGED--------------QTDWINIPLSN--------------LD----EALEMPLVIENLLPATR  151 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~~~--------------~~~w~~~~~~~--------------~~----~~~~~~~~i~~L~p~t~  151 (197)
                      .|.+.+. ...+.+.+.+              ...|.......              ..    ......++|.+|+|++.
T Consensus        81 ~~~s~~~-~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  159 (186)
T 1qr4_A           81 RHKSKPT-TIKGSTVVGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVD  159 (186)
T ss_dssp             SCBCCCE-EEEEECCCCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCE
T ss_pred             CccCCCE-EEEEECCCCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCE
Confidence            7666542 3333443222              23343322110              00    02356799999999999


Q ss_pred             EEEEEEEEcCCCCCCcce
Q psy9139         152 YELTISAKNDAGSTNKNY  169 (197)
Q Consensus       152 Y~v~V~a~n~~G~~~~~~  169 (197)
                      |.|+|+|.|..|.|++..
T Consensus       160 Y~~~V~A~~~~g~s~p~~  177 (186)
T 1qr4_A          160 YNVNIISVKGFEESEPIS  177 (186)
T ss_dssp             EEEEEEEEETTEECCCEE
T ss_pred             EEEEEEEEcCCCcCcCEE
Confidence            999999999999888644

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.81  E-value=1.1e-18  Score=120.72  Aligned_cols=148  Identities=21%  Similarity=0.240  Sum_probs=102.9

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEe------------CCcccEEEECCCCCCC
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHV------------DAEYREFTLTQLKCGT   92 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~------------~~~~~~~~i~~L~p~~   92 (197)
                      +|..|  .+...+.+++.|.|.++.+.++++.+|.|+++..  ...|..+..            ......+++.+|.|++
T Consensus         4 pP~~~--~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   81 (214)
T 2ibg_A            4 PPTPP--NVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH   81 (214)
T ss_dssp             CCCCC--EEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred             CCCCC--EeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence            44444  4455788999999999876667899999999842  367765431            1345678999999999


Q ss_pred             EEEEEEEEEcCCcCCCCCC-c--eEeecC--C----CC-------------CCCeeecCC----------------C--C
Q psy9139          93 HYKINIKLVNSIGESKPSK-T--IAASTK--G----ED-------------QTDWINIPL----------------S--N  132 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s~-~--~~~~t~--~----~~-------------~~~w~~~~~----------------~--~  132 (197)
                      .|.|+|.|.|..|.+..+. .  +...+.  .    .|             ...|.....                .  .
T Consensus        82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~  161 (214)
T 2ibg_A           82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAG  161 (214)
T ss_dssp             EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCS
T ss_pred             EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCc
Confidence            9999999999988765443 1  222211  1    11             234544320                0  0


Q ss_pred             Cc------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         133 LD------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       133 ~~------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ..      ......|+|.+|+|++.|.|+|+|.|..|.|+.+..+...|.
T Consensus       162 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~  211 (214)
T 2ibg_A          162 EYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQ  211 (214)
T ss_dssp             CCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             ceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEec
Confidence            00      011467999999999999999999999999997766666554

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.81  E-value=2.5e-18  Score=125.59  Aligned_cols=176  Identities=14%  Similarity=0.101  Sum_probs=113.8

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEee-cCCeEEEEeeeCCCCCccccEEEEEEEeCC-------CCcE
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQST-TTHSISILWKPSYDGGAIITHYIVSYRDRT-------EDWQ   72 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~-~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-------~~~~   72 (197)
                      .|.|+|.+.|..+.....+.+.+..+|++|. +.+... ..+++.+.|.++.+++.+ ..|.|+++...       ..|.
T Consensus        73 ~g~y~c~~~~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~  151 (313)
T 2d9q_B           73 AFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLP-TSFTLKSFKSRGNCQTQGDSIL  151 (313)
T ss_dssp             EEEEEEEESSSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCTTSCSCCCCEE
T ss_pred             cceEEeeecCCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCc-eeEEEEEEecCCCcccCCcccc
Confidence            6999999876545445567888899999998 777776 468999999998876555 56999987432       2344


Q ss_pred             EEEeCCcccEEEE--CCCCCCCEEEEEEEEEcCCcCCCCCC-------------ceEeecCC-------CC---CCCeee
Q psy9139          73 SVHVDAEYREFTL--TQLKCGTHYKINIKLVNSIGESKPSK-------------TIAASTKG-------ED---QTDWIN  127 (197)
Q Consensus        73 ~~~~~~~~~~~~i--~~L~p~~~y~~~v~a~~~~g~~~~s~-------------~~~~~t~~-------~~---~~~w~~  127 (197)
                      .+........+.+  .+|.+++.|.|+|.|.|..|.+....             +..+....       ..   ...|..
T Consensus       152 ~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~  231 (313)
T 2d9q_B          152 DCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEP  231 (313)
T ss_dssp             EECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEEC
T ss_pred             cCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECC
Confidence            3332233455666  45999999999999999998753211             11111110       01   112221


Q ss_pred             cC------------------CCCCc-----ccccceEEEcCCCCCCeEEEEEEEEcCCCCCC---cceEEEEeeeCC
Q psy9139         128 IP------------------LSNLD-----EALEMPLVIENLLPATRYELTISAKNDAGSTN---KNYVFATLSVNG  178 (197)
Q Consensus       128 ~~------------------~~~~~-----~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~---~~~~~~t~~~~~  178 (197)
                      ..                  .....     ......+.|.+|+|++.|.|+|+|.|..|.|.   .+..+...|.++
T Consensus       232 p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~  308 (313)
T 2d9q_B          232 WQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER  308 (313)
T ss_dssp             CGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred             CCCCCceeEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence            11                  00000     01245699999999999999999999977765   455555555543

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=99.81  E-value=6.3e-18  Score=121.96  Aligned_cols=165  Identities=18%  Similarity=0.262  Sum_probs=110.0

Q ss_pred             eEEEEEEeCCCCceeEEEEEecC---CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCC-----CcEE
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILS---PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTE-----DWQS   73 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~---~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~-----~~~~   73 (197)
                      .+++.|.|..|....+.......   +|.++. +.+.... +++.|.|.++..   .+.+|.|+|+. ...     .|..
T Consensus        75 ~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~  150 (290)
T 3l5i_A           75 LATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQ  150 (290)
T ss_dssp             EEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEECSSSCCCCEEEE
T ss_pred             EEEEEEEcCCCCCCCceEEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECCCCCCCCcCeEE
Confidence            46678889999765543333333   455665 5555554 799999999763   68999999983 221     2444


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCC-C----------------CCCeeecC-------
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE-D----------------QTDWINIP-------  129 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~-~----------------~~~w~~~~-------  129 (197)
                      .. ......+.+.+|.|++.|.|+|.|.|..|.+.+ ......+... |                ...|....       
T Consensus       151 ~~-~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~  228 (290)
T 3l5i_A          151 ED-GTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGF  228 (290)
T ss_dssp             EE-TTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSC
T ss_pred             cc-CCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCE
Confidence            43 555677888999999999999999999998764 3333333321 1                34454211       


Q ss_pred             ------------CCCC---cccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         130 ------------LSNL---DEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       130 ------------~~~~---~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                                  ....   .......|+|.+|+|++.|.|+|+|.|.+| |+.+..+...|
T Consensus       229 i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T  288 (290)
T 3l5i_A          229 IRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTT  288 (290)
T ss_dssp             CCEEEEEEEETTSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEEC
T ss_pred             EEEEEEEEEeCCCCeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeec
Confidence                        0000   002356799999999999999999999999 66554454443

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=99.81  E-value=2.6e-17  Score=118.78  Aligned_cols=161  Identities=22%  Similarity=0.224  Sum_probs=113.8

Q ss_pred             eEEEEEEeCCCCceeEE-EEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcc
Q psy9139           4 NYTCLADNIFGKDDIYY-QVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEY   80 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~-~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~   80 (197)
                      .|++.|.|..|....+. .+.....|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+++.. ...+.........
T Consensus        88 ~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~  164 (290)
T 3r8q_A           88 EVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKT---ETITGFQVDAVPANGQTPIQRTIKPDV  164 (290)
T ss_dssp             EEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECSSCEEEEEECCS---CCCCEEEEEEEESSSCCCEEEEECTTC
T ss_pred             EEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCCCeEEEEEeCCC---CcccEEEEEEEECCCCcceEEecCCCc
Confidence            35677889888654432 223333456666 8888889999999999863   4678999999843 3344445567778


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC--------------CCCeeecCCCC--------------
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED--------------QTDWINIPLSN--------------  132 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~--------------~~~w~~~~~~~--------------  132 (197)
                      +.+++.+|.|++.|.|+|.|.|..|.+.+. .....+.+.+              ...|.......              
T Consensus       165 ~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~  243 (290)
T 3r8q_A          165 RSYTITGLQPGTDYKIYLYTLNDNARSSPV-VIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPP  243 (290)
T ss_dssp             SEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECCCCCCEEEEEEEEETTEEEEEEECCSSCCCEEEEEEECTTSCC
T ss_pred             cEEEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecCCCCCCCccEEEeeCCCEEEEEEeCCCCcccEEEEEEEeCCCCc
Confidence            899999999999999999999999887653 2333343322              23343322100              


Q ss_pred             -----CcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         133 -----LDEALEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       133 -----~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                           ........+++.+|+|++.|.|+|+|.|..|.|++.
T Consensus       244 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~  284 (290)
T 3r8q_A          244 REVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPL  284 (290)
T ss_dssp             EECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             ceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence                 000135689999999999999999999999998853

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.80  E-value=9.8e-18  Score=115.10  Aligned_cols=142  Identities=23%  Similarity=0.367  Sum_probs=102.4

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--CcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..+| +|. +.+...+.+++.|.|.++.  ++.+.+|.|+|+....  .+....+....+.+++.+|.|++.|.|+|.|.
T Consensus        21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   97 (203)
T 2gee_A           21 MEVP-QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTV   97 (203)
T ss_dssp             SCCC-CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             ccCc-CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence            3567 555 9999999999999999987  3568999999984322  23444556778899999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCCCC-------------CCCeeecCCC-CCc-------------------ccccceEEEcCCCC
Q psy9139         102 NSIGESKPSKTIAASTKGED-------------QTDWINIPLS-NLD-------------------EALEMPLVIENLLP  148 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~~~-------------~~~w~~~~~~-~~~-------------------~~~~~~~~i~~L~p  148 (197)
                      +..|.+.+.........+.|             ...|...... +..                   ......++|.+|+|
T Consensus        98 ~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  177 (203)
T 2gee_A           98 KNGGESTPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLP  177 (203)
T ss_dssp             SSSCBCCCEEEEEECCCCCCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCT
T ss_pred             eCCCccccEeeeecCCCcCCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCC
Confidence            98887765432222222222             3445443211 000                   01356899999999


Q ss_pred             CCeEEEEEEEEcCCCCCCcce
Q psy9139         149 ATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       149 ~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ++.|.|+|+|.|..|.|++..
T Consensus       178 ~t~Y~~~V~A~~~~g~s~p~~  198 (203)
T 2gee_A          178 GTEYVVSVSSVYEQHESTPLR  198 (203)
T ss_dssp             TCEEEEEEEEEETTEECCCEE
T ss_pred             CCEEEEEEEEecCCCcCCCee
Confidence            999999999999999998644

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=99.80  E-value=2e-17  Score=123.50  Aligned_cols=164  Identities=18%  Similarity=0.259  Sum_probs=117.5

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEY   80 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~   80 (197)
                      .|++.|.|..|....+.......+| +|. +.+...+.+++.|.|.++.  ++.+.+|.|+|+.  ....|....+....
T Consensus       164 ~~~V~a~~~~g~s~~s~~~~~t~~~-~p~~l~~~~~~~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~  240 (375)
T 3t1w_A          164 DISVITLINGGESAPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSD  240 (375)
T ss_dssp             EEEEEEEETTEECCCEEEEEECCCC-CCEEEEEESCCSSCEEEEEECCS--SCCCCEEEEEEEEGGGTTCCEEEEECTTC
T ss_pred             EEEEEEEeCCcccCCeeeeeecCCC-CCceeEEEecccCEEEEEEcCCC--CCCccEEEEEEEeCCCCCCcEEEEcCCCc
Confidence            3566788998865544433333444 565 8888889999999999975  3568899999984  33567777777778


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC-------------CCCeeecCCCCC--------------
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED-------------QTDWINIPLSNL--------------  133 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~-------------~~~w~~~~~~~~--------------  133 (197)
                      ..+++.+|.|++.|.|+|.|.|..|.+.+........+..|             ...|........              
T Consensus       241 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~  320 (375)
T 3t1w_A          241 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGR  320 (375)
T ss_dssp             CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSS
T ss_pred             CEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCc
Confidence            89999999999999999999999988766433222222222             234443221100              


Q ss_pred             c-----ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         134 D-----EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       134 ~-----~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      .     ......+++.+|.|++.|.|+|+|.|..|.|++..-
T Consensus       321 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~  362 (375)
T 3t1w_A          321 PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG  362 (375)
T ss_dssp             CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             ceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCceee
Confidence            0     023567999999999999999999999999986543

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=99.79  E-value=3.1e-17  Score=131.24  Aligned_cols=163  Identities=14%  Similarity=0.236  Sum_probs=117.0

Q ss_pred             eEEEEEEeCCCC---ceeEEEEEec---CCCCCCE-EEEEee--cCC---eEEEEeeeCCCCCccccEEEEEEE-e----
Q psy9139           4 NYTCLADNIFGK---DDIYYQVTIL---SPPGVPN-ILLQST--TTH---SISILWKPSYDGGAIITHYIVSYR-D----   66 (197)
Q Consensus         4 ~y~c~a~n~~G~---~~~~~~~~~~---~~P~~p~-~~~~~~--~~~---~~~l~W~~~~~~~~~i~~y~v~~~-~----   66 (197)
                      .|++.|.|..|.   .+.+..+...   .+|.+|. +.+...  +.+   ++.|.|.+|.+.+++|.+|+|+|+ .    
T Consensus       237 ~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~  316 (680)
T 1zlg_A          237 QFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSK  316 (680)
T ss_pred             EEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEeccccc
Confidence            467788899882   2222233322   4778886 777776  777   999999998766788999999998 2    


Q ss_pred             ---CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc---eEeecCCCC----------------CC-
Q psy9139          67 ---RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT---IAASTKGED----------------QT-  123 (197)
Q Consensus        67 ---~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~---~~~~t~~~~----------------~~-  123 (197)
                         ....|....+....+.++|.+|.|++.|.|+|.|.|..|.+.++..   +.+.|...+                .. 
T Consensus       317 ~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~p~~l~~~~~s~tsi~lp  396 (680)
T 1zlg_A          317 SLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLP  396 (680)
T ss_pred             ccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCCccccccccccCcccccc
Confidence               1225666666667789999999999999999999999999877665   556554321                01 


Q ss_pred             ----------CeeecCC----------------CC---------------------C---cccccceEEEcCCCCCCeEE
Q psy9139         124 ----------DWINIPL----------------SN---------------------L---DEALEMPLVIENLLPATRYE  153 (197)
Q Consensus       124 ----------~w~~~~~----------------~~---------------------~---~~~~~~~~~i~~L~p~t~Y~  153 (197)
                                .|.....                ..                     .   .......|+|.+|+|++.|.
T Consensus       397 ~~~~~~~~~l~W~~P~~~~~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~  476 (680)
T 1zlg_A          397 FQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYK  476 (680)
T ss_pred             ccccCCCccccccCCcccCCcceEEEEEeCCCCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEE
Confidence                      4543310                00                     0   00124578999999999999


Q ss_pred             EEEEEEcCCCCCC
Q psy9139         154 LTISAKNDAGSTN  166 (197)
Q Consensus       154 v~V~a~n~~G~~~  166 (197)
                      |+|+|.|..|.++
T Consensus       477 ~~V~A~n~~G~s~  489 (680)
T 1zlg_A          477 VTVQPIRPKSHSK  489 (680)
T ss_pred             EEEEEecCCCCCC
Confidence            9999999999765

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=99.78  E-value=2e-17  Score=114.37  Aligned_cols=118  Identities=24%  Similarity=0.361  Sum_probs=98.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~   77 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|.+|. +.+ .....++.|.|.++. +++.++..|.|+|+. ....|......
T Consensus        87 d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~  165 (215)
T 3mtr_A           87 DFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD  165 (215)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEE
T ss_pred             hCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccc
Confidence            47999999999999999999999999999998 444 567788999999764 666789999999984 45578765432


Q ss_pred             C----cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          78 A----EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        78 ~----~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      .    ....++|.+|.+++.|.|+|.|.|..|.+.++..+.+.|.+
T Consensus       166 ~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p  211 (215)
T 3mtr_A          166 AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  211 (215)
T ss_dssp             HHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred             cccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence            2    23789999999999999999999999999999888888754

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=99.78  E-value=4.2e-17  Score=121.36  Aligned_cols=163  Identities=19%  Similarity=0.267  Sum_probs=114.5

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEY   80 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~   80 (197)
                      .|++.|.|..|.+..... .+...|.+|. +.+...+.+++.|.|.++.  +..+.+|.|+++.  ....|....+....
T Consensus        72 ~~~V~a~~~~g~s~~~~~-~~~~~~~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~  148 (368)
T 1fnf_A           72 NVSVYTVKDDKESVPISD-TIIPAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSD  148 (368)
T ss_dssp             EEEEEEEETTEECCCEEE-EECCCCCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCEEEEECTTC
T ss_pred             EEEEEEEcCCCccCceee-eecCCCcCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCCCccEEEEcCCCc
Confidence            356678898885443322 2333333565 8888889999999999985  3568899999984  33467777777778


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC-------------CCCeeecCCCCCc-------------
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED-------------QTDWINIPLSNLD-------------  134 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~-------------~~~w~~~~~~~~~-------------  134 (197)
                      ..+++.+|.|++.|.|+|.|.|..|.+.+...........|             ...|.........             
T Consensus       149 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~  228 (368)
T 1fnf_A          149 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGR  228 (368)
T ss_dssp             CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSC
T ss_pred             ceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCC
Confidence            89999999999999999999999987765322222222222             2334332211100             


Q ss_pred             ------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         135 ------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       135 ------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                            ......+++.+|.|++.|.|+|+|.|..|.++.+.
T Consensus       229 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~  269 (368)
T 1fnf_A          229 PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI  269 (368)
T ss_dssp             CEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc
Confidence                  01356799999999999999999999999888654

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=99.78  E-value=1.1e-16  Score=119.06  Aligned_cols=161  Identities=19%  Similarity=0.175  Sum_probs=115.6

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEY   80 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~   80 (197)
                      .|++.|.|..|.... .......+|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+++..  .+.+....+....
T Consensus       163 ~~~V~a~~~~g~s~~-~~~~~~~~~~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~  238 (368)
T 1fnf_A          163 VVSVSSVYEQHESTP-LRGRQKTGLDSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGRPREDRVPHSR  238 (368)
T ss_dssp             EEEEEEEETTEECCC-EEEEEECCCCCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSCCEEEEEETTC
T ss_pred             EEEEEEEeCCCCCCC-eEeeecCCCCCCCccEEEEccCCEEEEEEeCCC---CCcCEEEEEEecCCCCCCccEEEeCCCc
Confidence            356677888885433 3444556677776 8888889999999999864   4688999999843  2455666666778


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC-CC-------------CCCeeecCCCCCc------------
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-ED-------------QTDWINIPLSNLD------------  134 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~-~~-------------~~~w~~~~~~~~~------------  134 (197)
                      +.+++.+|.|++.|.|+|.|.|..|.+.++.. ...+.+ .|             ...|.........            
T Consensus       239 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~-~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~  317 (368)
T 1fnf_A          239 NSITLTNLTPGTEYVVSIVALNGREESPLLIG-QQSTVSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNS  317 (368)
T ss_dssp             CEEEEESCCTTCEEEEEEEEEETTEECCCEEE-EEECCCCSCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEEETTCCS
T ss_pred             CEEEECCCCCCCEEEEEEEEEeCCccCCcccc-cccCCCCCCCeeEEEecCCCEEEEEeeCCCCccceEEEEEEECCCCC
Confidence            89999999999999999999999998766432 222322 22             2344332211000            


Q ss_pred             -------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         135 -------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       135 -------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                             ......+++.+|+|++.|.|+|+|.|..|.|+.+.
T Consensus       318 ~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~  359 (368)
T 1fnf_A          318 PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS  359 (368)
T ss_dssp             CCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred             ccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence                   01256799999999999999999999999998543

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.78  E-value=1.2e-17  Score=114.43  Aligned_cols=137  Identities=18%  Similarity=0.373  Sum_probs=97.4

Q ss_pred             CCE-EEEEeec--CCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          30 VPN-ILLQSTT--THSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        30 ~p~-~~~~~~~--~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +|. +.+...+  .+++.|.|.++.  ++.+.+|.|+|+.  ..+.|..+.+....+.++|.+|.|++.|.|+|.|.|..
T Consensus         2 ~P~~l~v~~v~~~~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~   79 (201)
T 2ha1_A            2 GPVEVFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQY   79 (201)
T ss_dssp             CCCEEECCSCSCCSSCEEEEEECCS--STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTT
T ss_pred             CceeEEEEecCCCCCEEEEEEeCCC--CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEecc
Confidence            344 7777766  899999999983  5678999999984  34678887778778899999999999999999999998


Q ss_pred             cCCCCCCceEeecC----------------C-C--------C--------CCCeeecCC--------------CCCc---
Q psy9139         105 GESKPSKTIAASTK----------------G-E--------D--------QTDWINIPL--------------SNLD---  134 (197)
Q Consensus       105 g~~~~s~~~~~~t~----------------~-~--------~--------~~~w~~~~~--------------~~~~---  134 (197)
                      |.+.++ .+.+.+.                . .        .        ...|.....              ....   
T Consensus        80 G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~  158 (201)
T 2ha1_A           80 GHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYL  158 (201)
T ss_dssp             SCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCEEE
T ss_pred             cccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCceeEE
Confidence            876532 1111100                0 0        0        122322111              0000   


Q ss_pred             --ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         135 --EALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       135 --~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                        ......+.|.+|+|++.|.|+|+|.|.+|.|++..
T Consensus       159 ~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s  195 (201)
T 2ha1_A          159 DLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL  195 (201)
T ss_dssp             EEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred             EcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence              02356799999999999999999999999988543

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=99.78  E-value=6.4e-17  Score=120.72  Aligned_cols=164  Identities=20%  Similarity=0.266  Sum_probs=116.5

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--CcEEEEeCCccc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVHVDAEYR   81 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--~~~~~~~~~~~~   81 (197)
                      .|++.|.|..|.+..........+|.++.+.+...+.+++.|.|.++.  ++.+.+|.|+++....  .+.........+
T Consensus        73 ~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~  150 (375)
T 3t1w_A           73 NVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVG  150 (375)
T ss_dssp             EEEEEEEETTEECCCEEEEECCCCCCCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCCSCEEEEECTTCC
T ss_pred             EEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCCceeEEEcCCCcc
Confidence            356677888776554444444556654458888889999999999875  4578999999984332  334445677788


Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC-------------CCCeeecCCCC---------------C
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED-------------QTDWINIPLSN---------------L  133 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~-------------~~~w~~~~~~~---------------~  133 (197)
                      .+++.+|.|++.|.|+|.|.|..|.+.++........+.|             ...|.......               .
T Consensus       151 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~  230 (375)
T 3t1w_A          151 YYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED  230 (375)
T ss_dssp             EEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC
T ss_pred             eEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC
Confidence            9999999999999999999999998877653322222222             34454431100               0


Q ss_pred             c-----ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         134 D-----EALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       134 ~-----~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .     ......+++.+|.|++.|.|+|+|.|..|.+.+..
T Consensus       231 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~  271 (375)
T 3t1w_A          231 VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR  271 (375)
T ss_dssp             CEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             cEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee
Confidence            0     01247899999999999999999999999888654

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.77  E-value=8.1e-18  Score=116.37  Aligned_cols=154  Identities=12%  Similarity=0.166  Sum_probs=104.6

Q ss_pred             ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-cEEEEeCCcccEEEECCC-CCCCEEEEEEEE
Q psy9139          24 ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-WQSVHVDAEYREFTLTQL-KCGTHYKINIKL  100 (197)
Q Consensus        24 ~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L-~p~~~y~~~v~a  100 (197)
                      +..+|.+|. +.+.....+++.|.|.++.+.+.. ..|.|+++..... +.........+.++|.+| .+++.|.|+|.|
T Consensus         4 ~g~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~~-~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A   82 (215)
T 1bqu_A            4 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLE-TNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA   82 (215)
T ss_dssp             -CCCCCCCEEEEEEEETTSCCEEEEECCSCCSSC-CEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             cCCCCCCCEeeEeEECCCCcEEEEcCCCCCCCCC-ceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEE
Confidence            457899998 888888889999999998765543 7899999844322 222233456688999999 999999999999


Q ss_pred             EcCCcCCCCCCceEeec-----CCCC----------------------------------------CCCeeecCCCCCcc
Q psy9139         101 VNSIGESKPSKTIAAST-----KGED----------------------------------------QTDWINIPLSNLDE  135 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t-----~~~~----------------------------------------~~~w~~~~~~~~~~  135 (197)
                      .|..|.+.. ....+.+     ..+|                                        ...|..+..... .
T Consensus        83 ~n~~G~~~s-~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~-~  160 (215)
T 1bqu_A           83 ENALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDT-A  160 (215)
T ss_dssp             EETTEEEEC-CCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGG-C
T ss_pred             EecccCccC-CcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccccc-c
Confidence            999987642 2222211     1111                                        122332211000 0


Q ss_pred             cccceEEEcCCCCCCeEEEEEEEEcCCCCCC---cceEEEEeeeCCCc
Q psy9139         136 ALEMPLVIENLLPATRYELTISAKNDAGSTN---KNYVFATLSVNGGK  180 (197)
Q Consensus       136 ~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~---~~~~~~t~~~~~~~  180 (197)
                      .....++|.+|+|++.|.|+|+|.|..|.|.   .+..+...+.++.|
T Consensus       161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P  208 (215)
T 1bqu_A          161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP  208 (215)
T ss_dssp             SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHH
T ss_pred             CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCC
Confidence            1256899999999999999999999998865   45555555655444

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.76  E-value=1.6e-16  Score=116.65  Aligned_cols=161  Identities=17%  Similarity=0.273  Sum_probs=108.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEE-eecCCeEEEEeeeCCCCCccccEEEEEEEeC----CCCc-EEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQ-STTTHSISILWKPSYDGGAIITHYIVSYRDR----TEDW-QSV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~-~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~----~~~~-~~~   74 (197)
                      |+|.|+|.   ..|.....+.|.+..+|..|.+.+. .....++.+.|.++.+++.+ ..|.+.++..    ...| ..+
T Consensus        71 d~G~Y~C~---~~g~~~~~~~L~V~~pP~~P~l~c~~~~~~~~~~c~W~~~~~~~~~-~~y~l~~~~~~~~~~~~~~~~c  146 (325)
T 1n26_A           71 DSGNYSCY---RAGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRSTPSLT-TKAVLLVRKFQNSPAEDFQEPC  146 (325)
T ss_dssp             GCEEEEEE---SSSSCSCEEEEEECCCCCCCCCEEEBSSTTSCEEEEECCSSCCCTT-CEEEEEEEEESSSSCEEEEEEE
T ss_pred             hCeEeEEE---eCCEEeeeEEEEeccCCCCCceeEEeecCCCcEEEEECCCCCCCCC-ceEEEEEEEccCCCCCcccccC
Confidence            57999999   3788888999999999999986555 34467999999988766544 7799988742    1122 222


Q ss_pred             E--eCCcccEEEECCCC-CCCEEEEEEEEEcCCcCCCCCCceEeec-----CCCC---------------CCCeeecCC-
Q psy9139          75 H--VDAEYREFTLTQLK-CGTHYKINIKLVNSIGESKPSKTIAAST-----KGED---------------QTDWINIPL-  130 (197)
Q Consensus        75 ~--~~~~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~s~~~~~~t-----~~~~---------------~~~w~~~~~-  130 (197)
                      .  .......+.+..+. +++.|.|+|.|.|..|.+.. ....+..     +.+|               ...|..... 
T Consensus       147 ~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s-~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~  225 (325)
T 1n26_A          147 QYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFS-KTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSW  225 (325)
T ss_dssp             EEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEEC-CCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTC
T ss_pred             CCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCccc-CcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCcc
Confidence            2  23445678898876 88999999999999987531 1111110     1111               122322111 


Q ss_pred             ------------------CCC----cccccceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         131 ------------------SNL----DEALEMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       131 ------------------~~~----~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                                        ...    .......|+|.+|.|++.|.|+|+|.|..|.|.
T Consensus       226 ~~~~~~~~Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~  283 (325)
T 1n26_A          226 NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGE  283 (325)
T ss_dssp             CCSSSCEEEEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSC
T ss_pred             CCCcEeEEEEEEEEeCCCCCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCC
Confidence                              000    001245789999999999999999999888665

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=99.76  E-value=9e-17  Score=128.57  Aligned_cols=176  Identities=16%  Similarity=0.249  Sum_probs=115.7

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCCCCCC-E-EEEEeecCCeEEEEeeeCCC-CCccccEEEEEEEeC-C--------C
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSPPGVP-N-ILLQSTTTHSISILWKPSYD-GGAIITHYIVSYRDR-T--------E   69 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p-~-~~~~~~~~~~~~l~W~~~~~-~~~~i~~y~v~~~~~-~--------~   69 (197)
                      .|.+.| ..|..|..-......+...|.+| . +.+...+.+++.|.|.++.+ +..++. |.|+++.. .        .
T Consensus       135 ~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~  212 (680)
T 1zlg_A          135 SGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDAT  212 (680)
T ss_pred             CCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccC
Confidence            355666 45777754333333457788888 5 88888999999999999853 445666 99999843 2        4


Q ss_pred             CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC-CCCCCceEeecCCC------C------------------CCC
Q psy9139          70 DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAASTKGE------D------------------QTD  124 (197)
Q Consensus        70 ~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~-~~~s~~~~~~t~~~------~------------------~~~  124 (197)
                      .|..+.. ...+.++|.+|.|++.|.|+|.|.|..|. +..+....+.+...      |                  ...
T Consensus       213 ~w~~v~~-~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~  291 (680)
T 1zlg_A          213 HWQTVAQ-TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIV  291 (680)
T ss_pred             ceEEEEe-cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEE
Confidence            6776553 45678999999999999999999999883 33322222333111      1                  112


Q ss_pred             eeecCC-C-------------------CC--------cccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE---EEE
Q psy9139         125 WINIPL-S-------------------NL--------DEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV---FAT  173 (197)
Q Consensus       125 w~~~~~-~-------------------~~--------~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~---~~t  173 (197)
                      |..... +                   ..        ...+...++|.+|.|++.|.|+|+|.|..|.|+.+..   +..
T Consensus       292 W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~  371 (680)
T 1zlg_A          292 WDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHF  371 (680)
T ss_pred             ecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEE
Confidence            321110 0                   00        0012367999999999999999999999999985443   444


Q ss_pred             eeeCCCc
Q psy9139         174 LSVNGGK  180 (197)
Q Consensus       174 ~~~~~~~  180 (197)
                      .+..+.+
T Consensus       372 ~T~~~~P  378 (680)
T 1zlg_A          372 TSTHATN  378 (680)
T ss_pred             ECCCCCC
Confidence            4444333

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=99.76  E-value=1.4e-16  Score=115.03  Aligned_cols=139  Identities=17%  Similarity=0.288  Sum_probs=105.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .+|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+|+.  ..+.|....+....+.++|.+|.|++.|.|+|.|.|
T Consensus        19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   95 (290)
T 3r8q_A           19 PAIPAPTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALK   95 (290)
T ss_dssp             -CCCCCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred             CCCCCCCceEEEECCCCEEEEEEeCCC---CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEe
Confidence            4566776 8888999999999999873   468899999984  346788777777888999999999999999999999


Q ss_pred             CCcCCCCCCceEeecCC---CC-------------CCCeeecCCCCCc------------------ccccceEEEcCCCC
Q psy9139         103 SIGESKPSKTIAASTKG---ED-------------QTDWINIPLSNLD------------------EALEMPLVIENLLP  148 (197)
Q Consensus       103 ~~g~~~~s~~~~~~t~~---~~-------------~~~w~~~~~~~~~------------------~~~~~~~~i~~L~p  148 (197)
                      ..|.+.++. ..+.+..   .|             ...|.........                  ......+++.+|.|
T Consensus        96 ~~g~s~~s~-~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  174 (290)
T 3r8q_A           96 DTLTSRPAQ-GVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQP  174 (290)
T ss_dssp             TTEECCCEE-EEEECCCCCCCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEEEECTTCSEEEECSCCT
T ss_pred             CCCCCCCcc-eeEecCCCCCCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEEecCCCccEEEECCCCC
Confidence            999887763 3444432   22             2344433211000                  01256799999999


Q ss_pred             CCeEEEEEEEEcCCCCCCcc
Q psy9139         149 ATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       149 ~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ++.|.|+|+|.|..|.+.+.
T Consensus       175 ~t~Y~~~V~A~n~~g~s~~~  194 (290)
T 3r8q_A          175 GTDYKIYLYTLNDNARSSPV  194 (290)
T ss_dssp             TCEEEEEEEEEETTEECCCE
T ss_pred             CCEEEEEEEEEeCCcccCCE
Confidence            99999999999999988764

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=99.75  E-value=9.4e-17  Score=129.47  Aligned_cols=179  Identities=17%  Similarity=0.151  Sum_probs=123.1

Q ss_pred             eeEEEEEE--eCCCCceeEEEEEe----cCCCCCCE-EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEeCC-CCcE
Q psy9139           3 GNYTCLAD--NIFGKDDIYYQVTI----LSPPGVPN-ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRT-EDWQ   72 (197)
Q Consensus         3 g~y~c~a~--n~~G~~~~~~~~~~----~~~P~~p~-~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~~~-~~~~   72 (197)
                      ..|+|.|.  |..|....+..+.+    ..+|.+|. +.+...+.+++.|.|.++..  .+.++.+|.|+|+... +.+.
T Consensus       329 Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~  408 (731)
T 2v5y_A          329 YEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQ  408 (731)
T ss_dssp             EEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEE
T ss_pred             EEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCc
Confidence            35677888  99997653332322    24568887 88888999999999999752  2346789999998432 3332


Q ss_pred             E-----EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC------------------CCCeeecC
Q psy9139          73 S-----VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED------------------QTDWINIP  129 (197)
Q Consensus        73 ~-----~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~------------------~~~w~~~~  129 (197)
                      .     .........++|.+|.|++.|.|+|.|.|..|.+. +..+.+.|...+                  ...|....
T Consensus       409 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~~~~si~l~W~~P~  487 (731)
T 2v5y_A          409 VREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPT  487 (731)
T ss_dssp             EEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEEETTEEEEECCCCS
T ss_pred             cceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeeecCCeEEEEEcCCC
Confidence            1     12345677899999999999999999999999874 666766664321                  22333221


Q ss_pred             CC---C--------------------------CcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCc
Q psy9139         130 LS---N--------------------------LDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK  180 (197)
Q Consensus       130 ~~---~--------------------------~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~  180 (197)
                      ..   +                          ........+++.+|+|++.|.|+|+|.|..|.|+.+. ....+..+.|
T Consensus       488 ~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~~P  566 (731)
T 2v5y_A          488 QTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT-NQFTTKISAP  566 (731)
T ss_dssp             CCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE-EEEECCCCCC
T ss_pred             CCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc-cEEEcCCCCC
Confidence            00   0                          0001245789999999999999999999999998764 4455555555


Q ss_pred             CCC
Q psy9139         181 AFH  183 (197)
Q Consensus       181 ~~p  183 (197)
                      .+|
T Consensus       567 ~~p  569 (731)
T 2v5y_A          567 SMP  569 (731)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            444

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=99.74  E-value=3.7e-16  Score=112.27  Aligned_cols=146  Identities=17%  Similarity=0.270  Sum_probs=106.0

Q ss_pred             EEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEE--eCCCCcEEEEeCCcccEEEECCCCCCCEEE
Q psy9139          19 YYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTLTQLKCGTHYK   95 (197)
Q Consensus        19 ~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~--~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~   95 (197)
                      +..+....+|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+|+  ...+.|....+......+.|.+|.|++.|.
T Consensus         6 s~~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~   82 (283)
T 1tdq_A            6 SGGGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYE   82 (283)
T ss_dssp             ------CCSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEE
T ss_pred             ecccccccCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEE
Confidence            33445567888997 8888899999999999876   46789999997  345667766677788899999999999999


Q ss_pred             EEEEEEcCCcCCCCCCceEeecCCCC--------------CCCeeecCCCCC-------------c-----ccc---cce
Q psy9139          96 INIKLVNSIGESKPSKTIAASTKGED--------------QTDWINIPLSNL-------------D-----EAL---EMP  140 (197)
Q Consensus        96 ~~v~a~~~~g~~~~s~~~~~~t~~~~--------------~~~w~~~~~~~~-------------~-----~~~---~~~  140 (197)
                      |+|.|.|..|.+.+. ...+.+.+.+              ...|........             .     ..+   ...
T Consensus        83 ~~V~a~~~~g~s~~~-~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  161 (283)
T 1tdq_A           83 VSISAVRGTNESDAS-STQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTK  161 (283)
T ss_dssp             EEEEEEETTEECCCE-EEEEECCCCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEECCSSSEEE
T ss_pred             EEEEEECCCCCCCCe-eEEEECCCCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECCCCCcccce
Confidence            999999998877542 3344443332              234443321100             0     012   567


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         141 LVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       141 ~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      +.+.+|.|++.|.|+|+|.|..|.+.+.
T Consensus       162 ~~i~~L~p~t~Y~~~V~A~n~~g~s~~~  189 (283)
T 1tdq_A          162 TTLTDLVPGTEYGVGISAVMNSKQSIPA  189 (283)
T ss_dssp             EEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             EEEecCCCCCEEEEEEEEEeCCCCCcce
Confidence            9999999999999999999999887754

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.72  E-value=4.2e-17  Score=100.13  Aligned_cols=93  Identities=19%  Similarity=0.280  Sum_probs=79.3

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE--eCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..+|++|. +.+.. ..+++.|.|.+|.+++++|.+|.|+|+...+.|..+.  +....+.+++.+|.+++.|.|||.|.
T Consensus         5 pep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~   83 (108)
T 1v5j_A            5 SSGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAF   83 (108)
T ss_dssp             CCCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEE
T ss_pred             CCCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence            35678887 66654 5688999999998888899999999998777898654  45678899999999999999999999


Q ss_pred             cCCcCCCCCCceEeecC
Q psy9139         102 NSIGESKPSKTIAASTK  118 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~  118 (197)
                      |..|.+.+|..+.+.|.
T Consensus        84 n~~G~s~pS~~~~v~T~  100 (108)
T 1v5j_A           84 AGSFVSDPSNTANVSTS  100 (108)
T ss_dssp             ETTEEEEECSCCCCCCS
T ss_pred             cCCCCcCCCCCEEEEeC
Confidence            99999999988887774

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.71  E-value=3.8e-17  Score=102.99  Aligned_cols=107  Identities=21%  Similarity=0.389  Sum_probs=89.6

Q ss_pred             CCCCceeEEEEEecCCCCCCE-E--EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE--eCCcccEEEEC
Q psy9139          12 IFGKDDIYYQVTILSPPGVPN-I--LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYREFTLT   86 (197)
Q Consensus        12 ~~G~~~~~~~~~~~~~P~~p~-~--~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~   86 (197)
                      .+|..+.++.+.+..+|.+|. +  .+...+.+++.|.|.++.+++.++.+|.|+++...+.|..+.  .....+.++|.
T Consensus         2 ~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~   81 (121)
T 1wf5_A            2 SSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVK   81 (121)
T ss_dssp             CCCCCCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEE
T ss_pred             CCCcccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCCceEeEcccCCCccEEEEC
Confidence            357777888888889999997 7  788888999999999988777889999999996668888762  35567889999


Q ss_pred             CCCCCCEEEEEEEEEcCCcCCCCCCce-EeecC
Q psy9139          87 QLKCGTHYKINIKLVNSIGESKPSKTI-AASTK  118 (197)
Q Consensus        87 ~L~p~~~y~~~v~a~~~~g~~~~s~~~-~~~t~  118 (197)
                      +|.|++.|.|+|+|.|..|.+.++... .+.+.
T Consensus        82 ~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~  114 (121)
T 1wf5_A           82 GLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP  114 (121)
T ss_dssp             SCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred             CcCCCCEEEEEEEEEcCCccCCCcCCcceeEcC
Confidence            999999999999999999998887664 34443

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=99.70  E-value=7.8e-16  Score=111.56  Aligned_cols=113  Identities=28%  Similarity=0.461  Sum_probs=96.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~   77 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|.+|. +.+.....+++.|.|.++. +++.++..|.++++. ....|......
T Consensus       172 d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~  251 (305)
T 2nzi_A          172 DAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA  251 (305)
T ss_dssp             TCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE
T ss_pred             ccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc
Confidence            57999999999999999999999999999998 8888889999999999864 556678999999984 55678766533


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceE
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA  114 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~  114 (197)
                      . ...++|.+|.+++.|.|+|.|.|..|.+.++....
T Consensus       252 ~-~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~  287 (305)
T 2nzi_A          252 R-ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSE  287 (305)
T ss_dssp             S-SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCC
T ss_pred             c-CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCC
Confidence            2 67899999999999999999999999998876543

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.69  E-value=2.1e-16  Score=97.89  Aligned_cols=93  Identities=30%  Similarity=0.475  Sum_probs=74.9

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCC-cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TED-WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~-~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .+|++|.+.....+.+++.|.|.++.+++++|.+|.|+|+.. ... |....+....+.++|.+|.|++.|+|+|.|.|.
T Consensus         7 ~~P~pP~~~~~~~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~   86 (114)
T 2kbg_A            7 REPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANR   86 (114)
T ss_dssp             CCCCSCCEECCBCSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECT
T ss_pred             CCccCCcccccccCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeC
Confidence            478888744344789999999999888999999999999953 333 445556677788999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.+.++. +.+.|..
T Consensus        87 ~G~s~pS~-~~~~T~~  101 (114)
T 2kbg_A           87 LGYSEPTV-YEFSMPP  101 (114)
T ss_dssp             TSCEEEEE-EEECCCC
T ss_pred             CcCcCCcC-CEEEcCC
Confidence            99998875 4565543

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=1.7e-16  Score=100.43  Aligned_cols=114  Identities=20%  Similarity=0.335  Sum_probs=89.9

Q ss_pred             EEEEEEeCCCCceeEEEEEec---CCCC-CCE-EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEe-CCCCcEEEEe
Q psy9139           5 YTCLADNIFGKDDIYYQVTIL---SPPG-VPN-ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRD-RTEDWQSVHV   76 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~~---~~P~-~p~-~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~-~~~~~~~~~~   76 (197)
                      ++|.|.|..|....+..+.+.   ..|. +|. +.+.....+++.|.|.++..  .++.+.+|.|+|+. ....|... .
T Consensus         2 ~~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~   80 (124)
T 2ed9_A            2 SSGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET-L   80 (124)
T ss_dssp             CSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE-E
T ss_pred             CeEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE-e
Confidence            467889999976544433332   3354 775 77888889999999999875  67789999999984 33345433 5


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      ....+.+.|.+|.|++.|.|+|+|.|..|.+.++..+.++|..
T Consensus        81 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e  123 (124)
T 2ed9_A           81 EPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE  123 (124)
T ss_dssp             CSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred             cCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence            6777899999999999999999999999999999988888764

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.68  E-value=3e-16  Score=99.33  Aligned_cols=94  Identities=26%  Similarity=0.504  Sum_probs=79.0

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe----CCCCcEEEEe---CCcccEEEECCCCCCCEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD----RTEDWQSVHV---DAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~----~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~   96 (197)
                      ..+|.+|. +.+...+.+++.|.|.++.+++.+|.+|.|+++.    ..+.|..+..   ......++|.+|.|++.|.|
T Consensus        15 ~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~f   94 (124)
T 1wis_A           15 PELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSF   94 (124)
T ss_dssp             CCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECC
T ss_pred             CCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEE
Confidence            46788887 8888889999999999988888899999999985    5567876542   46678899999999999999


Q ss_pred             EEEEEcCCcCCCCCCce-EeecC
Q psy9139          97 NIKLVNSIGESKPSKTI-AASTK  118 (197)
Q Consensus        97 ~v~a~~~~g~~~~s~~~-~~~t~  118 (197)
                      +|+|.|..|.+.++... .++|.
T Consensus        95 rV~A~N~~G~s~~S~~~~~~~T~  117 (124)
T 1wis_A           95 RMRQVNIVGTSPPSQPSRKIQTL  117 (124)
T ss_dssp             CCEEECSSCBCCCCCCCCCEECC
T ss_pred             EEEEEECCccCCCcCCccceEcC
Confidence            99999999999888753 45554

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=99.68  E-value=8.7e-16  Score=114.90  Aligned_cols=119  Identities=26%  Similarity=0.296  Sum_probs=90.3

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEec----CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcE-EEE
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTIL----SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQ-SVH   75 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~----~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~-~~~   75 (197)
                      .+.|+|.|.|..|....+..+.+.    .+|.+|.+.....+.+++.|.|.++.++++++.+|.|+|+. ....|. ...
T Consensus       264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~  343 (389)
T 2jll_A          264 TYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK  343 (389)
T ss_dssp             EEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCE
T ss_pred             EEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEee
Confidence            578999999999975543333332    36788876666688999999999988888899999999984 444554 334


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED  121 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~  121 (197)
                      +....+.++|.+|.|++.|.|+|+|.|..|.+.++. ..+.|.+.|
T Consensus       344 ~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~~P  388 (389)
T 2jll_A          344 VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPPKP  388 (389)
T ss_dssp             ECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCCCC
T ss_pred             ccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCCCC
Confidence            566678899999999999999999999999998874 466665543

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.67  E-value=4.8e-15  Score=92.28  Aligned_cols=94  Identities=22%  Similarity=0.402  Sum_probs=79.5

Q ss_pred             CCCCCCE-EEEEee--cCCeEEEEeeeCCCCCccccEEEEEEEeC----CCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQST--TTHSISILWKPSYDGGAIITHYIVSYRDR----TEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~~--~~~~~~l~W~~~~~~~~~i~~y~v~~~~~----~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .+|.+|. +.+...  +.+++.|.|.++.+.++.|.+|.|+|+..    ...|....+....+.++|.+|.|++.|.|+|
T Consensus         7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   86 (114)
T 2ede_A            7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRI   86 (114)
T ss_dssp             CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEE
T ss_pred             CCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEE
Confidence            4668887 777776  78999999999987777899999999842    2356766667778899999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecCC
Q psy9139          99 KLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      +|.|..|.+.++..+.+.|..
T Consensus        87 ~A~n~~G~g~~S~~~~~~T~~  107 (114)
T 2ede_A           87 QARNSKGVGPLSDPILFRTLK  107 (114)
T ss_dssp             EEECSSCBCCCCCCEEEECCC
T ss_pred             EEEeCCcCcCCcccEEEEecC
Confidence            999999999999988888754

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=99.66  E-value=3.8e-16  Score=123.00  Aligned_cols=164  Identities=20%  Similarity=0.297  Sum_probs=110.7

Q ss_pred             eEEEEEEeCCCCcee-EEEEEe--cCCCCCCE-EEE--EeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEe
Q psy9139           4 NYTCLADNIFGKDDI-YYQVTI--LSPPGVPN-ILL--QSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHV   76 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~~~--~~~P~~p~-~~~--~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~   76 (197)
                      .|+|.|.|..|.... ...+..  ..+|.+|. +.+  .....+++.|+|.++...+..+..|.|+|+. ....|..+..
T Consensus       172 ~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~  251 (589)
T 3l5h_A          172 EVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP  251 (589)
T ss_dssp             EECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCT
T ss_pred             EEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEcc
Confidence            467899999997432 222222  24688887 666  4567899999999987555678899999984 4456775432


Q ss_pred             ---CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC---CCceEeecCCCC----------------------CCCeeec
Q psy9139          77 ---DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP---SKTIAASTKGED----------------------QTDWINI  128 (197)
Q Consensus        77 ---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~---s~~~~~~t~~~~----------------------~~~w~~~  128 (197)
                         ....+.+.+.+|.|++.|.|+|+|.|..|.+.+   +..+.+.|....                      ...|...
T Consensus       252 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~  331 (589)
T 3l5h_A          252 EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTL  331 (589)
T ss_dssp             TSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCC
T ss_pred             ccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeC
Confidence               344678999999999999999999999887654   444444432211                      2334321


Q ss_pred             CCCCCc------------------c--cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         129 PLSNLD------------------E--ALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       129 ~~~~~~------------------~--~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ......                  .  .....++  .|.+++.|.|+|+|.|..|.|+.+.
T Consensus       332 ~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G~~~~s~  390 (589)
T 3l5h_A          332 PPFEANGKILDYEVTLTRWKSHLQNYTVNATKLT--VNLTNDRYLATLTVRNLVGKSDAAV  390 (589)
T ss_dssp             CTTTSSSCCCEEEEEECCTTSCCCBCCCSSSCCE--ECCCSSCCCEEEEEEBTTBCCCCCC
T ss_pred             CchhccCceeeEEEEEecCCCCceeeccCCceEE--EEeCCCCEEEEEEEEeCCccCCCeE
Confidence            110000                  0  1122333  4889999999999999999998653

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.66  E-value=1.2e-15  Score=93.78  Aligned_cols=93  Identities=15%  Similarity=0.215  Sum_probs=76.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .+|.+|. +.+...+.+++.|.|.++.+++.+|.+|.|+++.....|..+. ....+.++|.+|.|++.|.|+|+|.|..
T Consensus         6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~n~~   84 (106)
T 1x4x_A            6 SGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICY-CGPGLSYEIKGLSPATTYYCRVQALSVV   84 (106)
T ss_dssp             CSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEE-EESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             CCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEE-eCCcceEEEcCCCCCCEEEEEEEEEcCC
Confidence            5677776 7777888999999999988755689999999985544554332 3455789999999999999999999999


Q ss_pred             cCCCCCCceEeecCC
Q psy9139         105 GESKPSKTIAASTKG  119 (197)
Q Consensus       105 g~~~~s~~~~~~t~~  119 (197)
                      |.+.++..+.+.|..
T Consensus        85 G~g~~S~~v~~~T~~   99 (106)
T 1x4x_A           85 GAGPFSEVVACVTPP   99 (106)
T ss_dssp             CCCCBCCCEEEECCC
T ss_pred             cCCCCcCCEEEECCC
Confidence            999998888888754

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.66  E-value=5.6e-16  Score=127.30  Aligned_cols=171  Identities=21%  Similarity=0.251  Sum_probs=115.9

Q ss_pred             EEEEE-EeCCCC----ceeEEEEEec---CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC------
Q psy9139           5 YTCLA-DNIFGK----DDIYYQVTIL---SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE------   69 (197)
Q Consensus         5 y~c~a-~n~~G~----~~~~~~~~~~---~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~------   69 (197)
                      |++.| .|..|.    ...+..+.+.   .+|.+|. +.+...+.+++.|.|.+|.+.++.+.+|.|+|+....      
T Consensus       564 ~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~~~~~~~~~~~~  643 (897)
T 2dtg_E          564 IFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFE  643 (897)
T ss_dssp             BEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSCTT
T ss_pred             EEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEEEECCCCcccee
Confidence            56677 788885    2223233333   4678887 8888899999999999997777789999998873111      


Q ss_pred             ------------------------------------------------------------CcEE-----E----------
Q psy9139          70 ------------------------------------------------------------DWQS-----V----------   74 (197)
Q Consensus        70 ------------------------------------------------------------~~~~-----~----------   74 (197)
                                                                                  .|..     +          
T Consensus       644 ~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v~~~~p~~~r~  723 (897)
T 2dtg_E          644 LDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRR  723 (897)
T ss_dssp             CSSSCSCCCCCC--------------------------------------------------------------------
T ss_pred             cccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceEEccCCCcccc
Confidence                                                                        0110     0          


Q ss_pred             -----------------EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC---CCceEeecCC------CC-------
Q psy9139          75 -----------------HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP---SKTIAASTKG------ED-------  121 (197)
Q Consensus        75 -----------------~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~---s~~~~~~t~~------~~-------  121 (197)
                                       ......+.++|.+|.|++.|.|+|.|.|..|.+.+   +..+.++|.+      .|       
T Consensus       724 ~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~  803 (897)
T 2dtg_E          724 SLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEI  803 (897)
T ss_dssp             ------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCS
T ss_pred             cccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEe
Confidence                             00113368999999999999999999999997653   4455666543      11       


Q ss_pred             ------CCCeeecCCCC-----------------Cc-------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         122 ------QTDWINIPLSN-----------------LD-------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       122 ------~~~w~~~~~~~-----------------~~-------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                            ...|.......                 ..       ......+++.+|+|+ .|.|+|+|.|.+|.|+.+..+
T Consensus       804 ~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v  882 (897)
T 2dtg_E          804 FENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPT  882 (897)
T ss_dssp             SSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCC
T ss_pred             CCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCE
Confidence                  34554332100                 00       012456899999999 699999999999999977666


Q ss_pred             EEeee
Q psy9139         172 ATLSV  176 (197)
Q Consensus       172 ~t~~~  176 (197)
                      ...+.
T Consensus       883 ~~~T~  887 (897)
T 2dtg_E          883 YFYVT  887 (897)
T ss_dssp             EECCC
T ss_pred             EEEeC
Confidence            55554

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=99.65  E-value=2.6e-16  Score=99.06  Aligned_cols=99  Identities=24%  Similarity=0.451  Sum_probs=84.8

Q ss_pred             CCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCC
Q psy9139          13 FGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLK   89 (197)
Q Consensus        13 ~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~   89 (197)
                      .|+.+..+.+.+..+|.+|. +.+...+.+++.|.|.++. +++.++.+|.|+++. ....|..+......+.+++.+|.
T Consensus         3 ~G~~~~~~~v~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L~   82 (120)
T 2yux_A            3 SGSSGASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELV   82 (120)
T ss_dssp             CCCCCCCCCCCCCCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCCC
T ss_pred             CCcccEEEEEEeecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCCC
Confidence            57777888888889999997 8888899999999999986 444779999999984 55678877656667789999999


Q ss_pred             CCCEEEEEEEEEcCCcCCCCCC
Q psy9139          90 CGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        90 p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      |++.|.|+|+|.|..|.+.++.
T Consensus        83 p~t~Y~frV~A~n~~G~s~~S~  104 (120)
T 2yux_A           83 IGNEYYFRVFSENMCGLSEDAT  104 (120)
T ss_dssp             SSEEEEEEECCCSSSCSCSSCE
T ss_pred             CCCEEEEEEEEeeCCcCCCCcc
Confidence            9999999999999999998765

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.65  E-value=4.8e-14  Score=102.59  Aligned_cols=163  Identities=16%  Similarity=0.163  Sum_probs=103.6

Q ss_pred             EEEEEEeCCCCceeEEEEEe----cCCCCCCEEEEEeecCCeEEEEeeeCCCC------CccccEEEEEEEeC--CCCcE
Q psy9139           5 YTCLADNIFGKDDIYYQVTI----LSPPGVPNILLQSTTTHSISILWKPSYDG------GAIITHYIVSYRDR--TEDWQ   72 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~----~~~P~~p~~~~~~~~~~~~~l~W~~~~~~------~~~i~~y~v~~~~~--~~~~~   72 (197)
                      +++.|.| .|.+..+....+    ..+++||.+.+.. ..++|.|.|.++...      ++.+..|.|.|+..  ...|.
T Consensus        76 ~rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP~v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~  153 (306)
T 3s98_A           76 LRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPEVHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER  153 (306)
T ss_dssp             EEEEEEC-SSCEEEEECCCBCHHHHCBCCCCEEEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE
T ss_pred             EEEEEEe-CCcCCCEeeeeEechhhCccCCCeEEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE
Confidence            4677889 664332222222    2467888766554 346899999965432      34688899998743  22343


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEc--CCcCCCCCCceEeecCCC-----C------------CCC---------
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVN--SIGESKPSKTIAASTKGE-----D------------QTD---------  124 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~--~~g~~~~s~~~~~~t~~~-----~------------~~~---------  124 (197)
                      .   ....+.++|.+|.|++.|.|+|+|.+  ..|.|.+|....+.+...     |            ...         
T Consensus       154 ~---~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~~~s~~l~W~~p~~~~~  230 (306)
T 3s98_A          154 I---ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMT  230 (306)
T ss_dssp             E---EEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEETTEEEEEEECSSSSCE
T ss_pred             E---ecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEecCEEEEEeCCCCCcEE
Confidence            2   23457899999999999999999999  678888888887776432     1            122         


Q ss_pred             --------------------eeecC-CCCCcccccceEEEcC-CCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         125 --------------------WINIP-LSNLDEALEMPLVIEN-LLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       125 --------------------w~~~~-~~~~~~~~~~~~~i~~-L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                                          |..+. ....   ....+.+.+ |.+...|.|||+|.|..|.|..+......+
T Consensus       231 ~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~---~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~  300 (306)
T 3s98_A          231 FQVQWLHAFLKRNPGNHLYKWKQIPDCENV---KTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDT  300 (306)
T ss_dssp             EEEEEEEGGGGSCC----CCCEECGGGTTB---SSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred             EEEEEehhhhhccccccccCceECCCceeC---CCccccCchhhcccCCEEEEEEEccCCCccccccccccCc
Confidence                                33210 0111   145677877 356569999999999988888655444443

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.65  E-value=1.2e-15  Score=94.07  Aligned_cols=94  Identities=20%  Similarity=0.308  Sum_probs=77.2

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|.|.+|.+.++.|.+|.|+|+.. ...|....+....+.++|.+|.|++.|.|+|+|.|.
T Consensus         6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~   85 (108)
T 2djs_A            6 SGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTV   85 (108)
T ss_dssp             CCCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEES
T ss_pred             CCCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEeC
Confidence            4677776 88888999999999999987777899999999843 233433334456788999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.+.++..+.+.|..
T Consensus        86 ~G~g~~S~~~~~~T~~  101 (108)
T 2djs_A           86 AGYGKFSGKMCFQTLT  101 (108)
T ss_dssp             SCEEEECCCEEEECCC
T ss_pred             CEECCCCCCEEEEeCC
Confidence            9999998888888754

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.64  E-value=1.9e-15  Score=95.94  Aligned_cols=102  Identities=25%  Similarity=0.387  Sum_probs=81.7

Q ss_pred             ceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC---CCCcEEEE-eCCcccEEEECCCCC
Q psy9139          16 DDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR---TEDWQSVH-VDAEYREFTLTQLKC   90 (197)
Q Consensus        16 ~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~---~~~~~~~~-~~~~~~~~~i~~L~p   90 (197)
                      .+..+.+.+..+|.+|. +.+...+.+++.|.|.++.+++.+|.+|.|+++..   .+.|..+. .....+. .+.+|.|
T Consensus         5 ~s~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p   83 (127)
T 1uey_A            5 SSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSP   83 (127)
T ss_dssp             CCCCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCT
T ss_pred             CcEEEEEEeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCC
Confidence            34456677788999998 88888899999999999887888999999999843   46787654 3334444 4679999


Q ss_pred             CCEEEEEEEEEcCCcCCCCCCc-eEeecC
Q psy9139          91 GTHYKINIKLVNSIGESKPSKT-IAASTK  118 (197)
Q Consensus        91 ~~~y~~~v~a~~~~g~~~~s~~-~~~~t~  118 (197)
                      ++.|.|+|+|.|..|.+.++.. ..+.|.
T Consensus        84 ~t~Y~frV~A~n~~G~s~~S~~~~~~~T~  112 (127)
T 1uey_A           84 YVNYSFRVMAVNSIGKSLPSEASEQYLTK  112 (127)
T ss_dssp             TCEECCEEEEEESSCBCCCCSCCCCEECC
T ss_pred             CCEEEEEEEEEeCCccCCccccccceEcC
Confidence            9999999999999999998876 356654

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.64  E-value=4.2e-16  Score=97.52  Aligned_cols=100  Identities=18%  Similarity=0.279  Sum_probs=79.8

Q ss_pred             EEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCC----Ccc-ccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCC
Q psy9139          20 YQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDG----GAI-ITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGT   92 (197)
Q Consensus        20 ~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~----~~~-i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~   92 (197)
                      +.+.+..+|.+|. +.+..++.+++.|.|.++.+.    +.+ |..|.|+..+ ....|..+.. ...+.++|.+|.|++
T Consensus         8 ~~~~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~-~~~t~~~v~gL~p~t   86 (120)
T 1wfu_A            8 MEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT-GYATRHVVEGLEPRT   86 (120)
T ss_dssp             CCCTTCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEE-ESCSEEEEESCCTTC
T ss_pred             EEEEeeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEec-CCccEEEECCCCCCC
Confidence            3456667788887 667778999999999998754    344 8999999554 4567876653 345679999999999


Q ss_pred             EEEEEEEEEcCCcCCCCCCceEeecCCC
Q psy9139          93 HYKINIKLVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      .|.|||+|.|..|.+.++..+.++|...
T Consensus        87 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~  114 (120)
T 1wfu_A           87 LYKFRLKVTSPSGEYEYSPVVSVATTRE  114 (120)
T ss_dssp             EEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred             EEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence            9999999999999999998888887543

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.64  E-value=3e-15  Score=94.29  Aligned_cols=91  Identities=29%  Similarity=0.550  Sum_probs=77.0

Q ss_pred             EecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEE--eCCcccEEEECCCCCCCEEEEE
Q psy9139          23 TILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVH--VDAEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        23 ~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~   97 (197)
                      ....+|.+|. +.+...+.+++.|.|.++.+++.+|.+|.|+++..  ...|..+.  +....+.++|.+|.|++.|.|+
T Consensus        13 ~~~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~fr   92 (121)
T 1x4z_A           13 GRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFR   92 (121)
T ss_dssp             SSCCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEE
T ss_pred             CcCCCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEE
Confidence            4456888887 88888899999999998778888899999999853  47887654  2566788999999999999999


Q ss_pred             EEEEcCCcCCCCCCce
Q psy9139          98 IKLVNSIGESKPSKTI  113 (197)
Q Consensus        98 v~a~~~~g~~~~s~~~  113 (197)
                      |+|.|..|.+.++...
T Consensus        93 V~A~n~~G~s~~S~~~  108 (121)
T 1x4z_A           93 VRALNMLGESEPSAPS  108 (121)
T ss_dssp             EEEEETTEECCCCCCC
T ss_pred             EEEEcCCCcCCCcCCC
Confidence            9999999998887664

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=99.64  E-value=3.4e-15  Score=91.64  Aligned_cols=93  Identities=19%  Similarity=0.260  Sum_probs=73.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCc-cccEEEEEEEeC-CCCcEEEE----eCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGA-IITHYIVSYRDR-TEDWQSVH----VDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~-~i~~y~v~~~~~-~~~~~~~~----~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ..|.+|. +.+...+.+ +.|.|.+|...++ +|.+|.|+|+.. ...|....    .....+.++|.+|.|++.|.|+|
T Consensus         5 ~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV   83 (105)
T 2haz_A            5 DTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL   83 (105)
T ss_dssp             CCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEE
T ss_pred             CCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEE
Confidence            5677787 666666666 9999999864444 599999999854 34474321    22356789999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecCC
Q psy9139          99 KLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|.|..|.+.++....++|.+
T Consensus        84 ~A~n~~G~g~~S~~~~~~T~p  104 (105)
T 2haz_A           84 AALNGKGLGEISAASEFKTQP  104 (105)
T ss_dssp             EEEETTEECCCCCCEEEECCC
T ss_pred             EEEcCCccCCCcCCEeeEEec
Confidence            999999999999988888753

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.64  E-value=6.5e-16  Score=98.51  Aligned_cols=113  Identities=22%  Similarity=0.301  Sum_probs=87.7

Q ss_pred             EEEEeCCCCceeEE---EE-EecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC---CcEEEEeCC
Q psy9139           7 CLADNIFGKDDIYY---QV-TILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE---DWQSVHVDA   78 (197)
Q Consensus         7 c~a~n~~G~~~~~~---~~-~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~---~~~~~~~~~   78 (197)
                      +.|.|..|....+.   .+ .....|.+|. +.+...+.+++.|.|.++.+.++.|.+|.|+|+....   .|.......
T Consensus         3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~   82 (130)
T 1wfo_A            3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAP   82 (130)
T ss_dssp             CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECT
T ss_pred             eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEEEeCC
Confidence            45778988654332   22 2235677776 8888889999999999988777789999999984322   344345677


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      ..+.++|.+|.|++.|.|+|+|.|..|.+.++..+.++|..
T Consensus        83 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  123 (130)
T 1wfo_A           83 SARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK  123 (130)
T ss_dssp             TCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSS
T ss_pred             CceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCC
Confidence            78899999999999999999999999999888777777643

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.63  E-value=6.2e-15  Score=92.61  Aligned_cols=96  Identities=19%  Similarity=0.236  Sum_probs=79.7

Q ss_pred             EecCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeC-CCCcEEEE-eCCcccEEEECCCCCCCEEEEEE
Q psy9139          23 TILSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDR-TEDWQSVH-VDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        23 ~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~-~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ....+|.+|. +.+.....+++.|.|.++. +.++.+.+|.|+|+.. ...|.... .....+.++|.+|.|++.|.|+|
T Consensus        13 t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   92 (120)
T 1x5f_A           13 TTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRV   92 (120)
T ss_dssp             CCCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEE
Confidence            3456788887 8888889999999999998 7777899999999854 34455443 34567899999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecC
Q psy9139          99 KLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~  118 (197)
                      +|.|..|.+.++..+.+.|.
T Consensus        93 ~A~n~~G~g~~S~~~~~~T~  112 (120)
T 1x5f_A           93 MAQNKHGSGESSAPLRVETQ  112 (120)
T ss_dssp             EEECSSCEEEECCCEEEECC
T ss_pred             EEECCCccCCCCCCEEEEeC
Confidence            99999999988888888774

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.63  E-value=1.3e-14  Score=90.39  Aligned_cols=95  Identities=21%  Similarity=0.343  Sum_probs=77.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEeCCC----CcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRDRTE----DWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .||.+|. +.+...+.+++.|.|.++.  ..++.|.+|.|.|+....    .|....+....+.++|.+|.|++.|.|+|
T Consensus         7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   86 (114)
T 1x4y_A            7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKM   86 (114)
T ss_dssp             SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEE
Confidence            5678887 7888899999999999985  467789999999983322    34333445556789999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecCCC
Q psy9139          99 KLVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      .|.|..|.+.++..+.++|...
T Consensus        87 ~A~n~~G~g~~S~~v~~~T~~~  108 (114)
T 1x4y_A           87 QCFNEGGESEFSNVMICETKAR  108 (114)
T ss_dssp             EEECTTCCCCCCCCEEEECCCC
T ss_pred             EEEcCCccCCCcCCEEEEeCCC
Confidence            9999999999999888888643

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=8.6e-15  Score=89.94  Aligned_cols=93  Identities=25%  Similarity=0.302  Sum_probs=77.3

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ...|.+|. +.+...+.+++.|.|.++.+.++.+.+|.|+|+. ....|..+..  ..+.++|.+|.|++.|.|+|+|.|
T Consensus         5 ~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~A~n   82 (106)
T 2ed8_A            5 SSGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV--DGLSYKLEGLKKFTEYSLRFLAYN   82 (106)
T ss_dssp             CCCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE--CSSCEEEESCCTTCEEEEEEEEEC
T ss_pred             CCCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC--CccEEEECCCCCCCEEEEEEEEEe
Confidence            35788887 8888889999999999987666789999999984 3445655444  357899999999999999999999


Q ss_pred             CCcCCCCCCceEeecCC
Q psy9139         103 SIGESKPSKTIAASTKG  119 (197)
Q Consensus       103 ~~g~~~~s~~~~~~t~~  119 (197)
                      ..|.+.++..+.++|..
T Consensus        83 ~~G~g~~S~~~~~~T~~   99 (106)
T 2ed8_A           83 RYGPGVSTDDITVVTLS   99 (106)
T ss_dssp             SSCEEEECCCEEEECCC
T ss_pred             CCccCCCcCCEEEEcCC
Confidence            99999888888887753

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=3.9e-15  Score=91.98  Aligned_cols=92  Identities=17%  Similarity=0.275  Sum_probs=75.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC----CCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT----EDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..|.+|. +.+...+.+++.|.|.++.+.++.|.+|.|+|+...    ..|..+  ....+.++|.+|.|++.|.|+|+|
T Consensus         6 ~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~A   83 (109)
T 2e7h_A            6 SGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL--KTSENRAELRGLKRGASYLVQVRA   83 (109)
T ss_dssp             CSSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE--EESSSEEEEESCCTTSCEEEEEEE
T ss_pred             CCCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE--ccCCCEEEECCCCCCCeEEEEEEE
Confidence            4666675 888889999999999999877778999999998432    223333  334568999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++..+.++|..
T Consensus        84 ~n~~G~g~~S~~~~~~T~~  102 (109)
T 2e7h_A           84 RSEAGYGPFGQEHHSQTQL  102 (109)
T ss_dssp             ECSSCBCCCCSCEECCCCC
T ss_pred             EeCCccCCCCCCEEEEcCC
Confidence            9999999999888887754

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=99.63  E-value=2.4e-14  Score=87.26  Aligned_cols=91  Identities=21%  Similarity=0.302  Sum_probs=74.3

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEeCC----CCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRT----EDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      -.+|. +.+...+.+++.|.|.++..  .++.|.+|.|.|+...    +.|....+....+.+.|.+|+|++.|.|+|.|
T Consensus         5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V~A   84 (102)
T 3n1f_C            5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQC   84 (102)
T ss_dssp             CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEEEE
Confidence            35676 78888999999999999753  6778999999998432    35766666666778999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecC
Q psy9139         101 VNSIGESKPSKTIAASTK  118 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~  118 (197)
                      .|..|.|.+|..+.++|.
T Consensus        85 ~n~~G~G~~S~~~~~~T~  102 (102)
T 3n1f_C           85 FNEGGESEFSNVMICETK  102 (102)
T ss_dssp             EETTEECCCCCCEEEECC
T ss_pred             ECCCcCCCCCCCEEeecC
Confidence            999999999988888763

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.63  E-value=4.4e-15  Score=92.00  Aligned_cols=95  Identities=23%  Similarity=0.329  Sum_probs=77.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|.|.++.+.++.|.+|.|+|+... ..+....+....+.++|.+|.|++.|.|+|+|.|.
T Consensus         9 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   88 (111)
T 1x5l_A            9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTS   88 (111)
T ss_dssp             CCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEET
T ss_pred             CCCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeC
Confidence            5677776 888888999999999998877778999999998432 23333333455778999999999999999999999


Q ss_pred             CcCCCCCCceEeecCCC
Q psy9139         104 IGESKPSKTIAASTKGE  120 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~~  120 (197)
                      .|.+.++..+.+.|...
T Consensus        89 ~G~g~~S~~~~~~T~~~  105 (111)
T 1x5l_A           89 AGCGRFSQAMEVETGKP  105 (111)
T ss_dssp             TEECCCCCCEEEECCCT
T ss_pred             CcCCCCcccEEEEcCCC
Confidence            99999998888887543

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=99.62  E-value=2.1e-15  Score=118.77  Aligned_cols=176  Identities=12%  Similarity=0.164  Sum_probs=114.5

Q ss_pred             CeeEEEEEEeCC--CCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE-eC
Q psy9139           2 VGNYTCLADNIF--GKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH-VD   77 (197)
Q Consensus         2 ~g~y~c~a~n~~--G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~-~~   77 (197)
                      .|.|+|.+.+..  +.....+.+.+..+|++|. +.+......++.+.|.++.+.. .+..|.|.++.....+..+. ..
T Consensus        75 ~~~y~C~~~~~~~~~~~~~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~-~~~~y~l~~~~~~~~~~~c~~~~  153 (589)
T 3l5h_A           75 NIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKFADCKAKR  153 (589)
T ss_dssp             CCCCCCC-CCTTCC-CCCCCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCSCCS-SCEEEEECCBCSSSBCCCEECBT
T ss_pred             ceeeEEecccCCCcccEEEeEEEeccCCCCCCEeeEEEECCCceEEEEECCCCcCC-cCceEEEEEEEcCCCcccCCCCC
Confidence            467899987422  2233455677788999998 8888888899999999986543 46789999874444444333 33


Q ss_pred             CcccEEEEC-CCCCCCEEEEEEEEEcCCcCCCCCCceEeec-----CCCC------------------------------
Q psy9139          78 AEYREFTLT-QLKCGTHYKINIKLVNSIGESKPSKTIAAST-----KGED------------------------------  121 (197)
Q Consensus        78 ~~~~~~~i~-~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t-----~~~~------------------------------  121 (197)
                      ...+.+.+. +|.+++.|.|+|.|.|..|.+.. ....+.+     +.+|                              
T Consensus       154 ~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s-~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~  232 (589)
T 3l5h_A          154 DTPTSCTVDYSTVYFVNIEVWVEAENALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIIL  232 (589)
T ss_dssp             TBSSCCBCCSCCCSSSCEEECEEEEESSCCBCC-CCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCE
T ss_pred             CCcEEEEECCCCchheeEEEEEEEEeCCCCccc-ccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeE
Confidence            445667777 79999999999999999987532 2222211     1111                              


Q ss_pred             ----------CCCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCc---ceEEEEeeeCCCc
Q psy9139         122 ----------QTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNK---NYVFATLSVNGGK  180 (197)
Q Consensus       122 ----------~~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~---~~~~~t~~~~~~~  180 (197)
                                ...|........ ......|.+.+|+|++.|.|+|+|.|..|.|..   +..+...+.++.|
T Consensus       233 ~Y~v~~~~~~~~~w~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P  303 (589)
T 3l5h_A          233 KYNIQYRTKDASTWSQIPPEDT-ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP  303 (589)
T ss_dssp             EEEEEEEETTCSCCBCCCTTSS-CSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCC
T ss_pred             EEEEEECCCCCCCcEEEccccC-cCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCC
Confidence                      122322211000 012467999999999999999999999988764   4444444555444

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.62  E-value=6.8e-15  Score=91.04  Aligned_cols=94  Identities=24%  Similarity=0.368  Sum_probs=76.8

Q ss_pred             cCCCCCCE-EEE-EeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          25 LSPPGVPN-ILL-QSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        25 ~~~P~~p~-~~~-~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..+|.+|. +.+ .....+++.|.|.++. +++.+|.+|.|+++. ....|..+. ....+.++|.+|.|++.|.|+|+|
T Consensus         6 ~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A   84 (110)
T 2crz_A            6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-QGSEVECTVSSLLPGKTYSFRLRA   84 (110)
T ss_dssp             CCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-EESCSEEEEESCCTTCEEEECCEE
T ss_pred             CCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-eCCcEEEEECCcCCCCEEEEEEEE
Confidence            35778886 666 4577889999998774 667789999999984 456787665 345778999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++....+.|..
T Consensus        85 ~n~~G~g~~S~~~~~~T~~  103 (110)
T 2crz_A           85 ANKMGFGPFSEKCDITTAP  103 (110)
T ss_dssp             ECSSCBCCCCCCEEEECCC
T ss_pred             EcCCccCCCCCccccccCC
Confidence            9999999999888877754

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.62  E-value=1.6e-14  Score=99.29  Aligned_cols=114  Identities=22%  Similarity=0.323  Sum_probs=88.9

Q ss_pred             eEEEEEEeCCCCceeEEEEEec---C-CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE-EEeC
Q psy9139           4 NYTCLADNIFGKDDIYYQVTIL---S-PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS-VHVD   77 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~---~-~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~-~~~~   77 (197)
                      .|+|.|.|..|....+..+.+.   . +|.+|. +.+...+.+++.|.|.++.++++++.+|.|+|+.....|.. ..+.
T Consensus        82 ~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~  161 (209)
T 2vkw_A           82 AVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLP  161 (209)
T ss_dssp             EEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEEC
T ss_pred             EEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceeeecC
Confidence            4678889999865443322222   2 577776 77778889999999999977788899999999875555653 3455


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      ...+.++|.+|.|++.|.|+|+|.|..|.+.++....+.+
T Consensus       162 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~  201 (209)
T 2vkw_A          162 SGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA  201 (209)
T ss_dssp             TTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred             CCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence            6678899999999999999999999999999887665544

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.61  E-value=2.7e-14  Score=98.37  Aligned_cols=152  Identities=18%  Similarity=0.280  Sum_probs=103.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEE--CCCCCCCEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTL--TQLKCGTHYKINIK   99 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i--~~L~p~~~y~~~v~   99 (197)
                      .||++|. +.+......++.+.|+++.+.+.+ ..|.|.|+. ....|..+.  .....+.+.+  .+|.+++.|.|+|.
T Consensus         2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~-~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~   80 (210)
T 3n06_B            2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLP-TNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVN   80 (210)
T ss_dssp             CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCC-SEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEE
T ss_pred             CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCC-ceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEE
Confidence            5789998 889888899999999998766555 689999984 344566543  1122345555  56999999999999


Q ss_pred             EEcCCcCCCCCCceEeec-----CCCC-----------------CCCeeecCCCC------------------Ccc----
Q psy9139         100 LVNSIGESKPSKTIAAST-----KGED-----------------QTDWINIPLSN------------------LDE----  135 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t-----~~~~-----------------~~~w~~~~~~~------------------~~~----  135 (197)
                      |.|..|.+.. ....+.+     ..+|                 .+.|.......                  ...    
T Consensus        81 A~N~~G~~~s-~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~  159 (210)
T 3n06_B           81 ATNQMGSSFS-DELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH  159 (210)
T ss_dssp             EEETTEEEEC-CCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE
T ss_pred             EEcCCCCeeC-CcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE
Confidence            9999987532 2222211     1111                 12343321110                  000    


Q ss_pred             --cccceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEEEEeeeCCC
Q psy9139         136 --ALEMPLVIENLLPATRYELTISAKNDAGS-TNKNYVFATLSVNGG  179 (197)
Q Consensus       136 --~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~~t~~~~~~  179 (197)
                        .....+.|.+|+|++.|.|+|+|.+..|. |+.+..+...|.++.
T Consensus       160 ~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~~  206 (210)
T 3n06_B          160 FAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSDF  206 (210)
T ss_dssp             EEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCTTC
T ss_pred             eccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcCCC
Confidence              12457899999999999999999999886 887777767766554

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=7.1e-15  Score=92.18  Aligned_cols=96  Identities=16%  Similarity=0.302  Sum_probs=78.9

Q ss_pred             ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          24 ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        24 ~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ...+|.+|. +.+...+.+++.|.|.++.+.++++.+|.|+|+.. ...|.... .....+.++|.+|.|++.|.|+|+|
T Consensus        14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   93 (119)
T 2ed7_A           14 SSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVA   93 (119)
T ss_dssp             SSSSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCEE
T ss_pred             CCCCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEEE
Confidence            346788887 88888899999999999987778899999999843 33454433 2356788999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++..+.+.|..
T Consensus        94 ~n~~G~g~~S~~~~~~T~~  112 (119)
T 2ed7_A           94 YNEWGPGESSQPIKVATQP  112 (119)
T ss_dssp             EESSCBCSCCCCEEEECCC
T ss_pred             EcCCccCCCcCCEEEEeCC
Confidence            9999999999888887753

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.61  E-value=1.6e-15  Score=94.88  Aligned_cols=96  Identities=24%  Similarity=0.439  Sum_probs=78.4

Q ss_pred             EecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          23 TILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        23 ~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      ....+|.+|. +.+...+.+++.|.|.++.+++.++.+|.|+++..  ...|..+......+.+++.+|.|++.|.|+|+
T Consensus        11 ~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~   90 (117)
T 1uem_A           11 DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR   90 (117)
T ss_dssp             CSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEE
Confidence            4457788887 88888899999999999887778899999999853  45677665555677899999999999999999


Q ss_pred             EEcCCcCCCCCCceE-eecC
Q psy9139         100 LVNSIGESKPSKTIA-ASTK  118 (197)
Q Consensus       100 a~~~~g~~~~s~~~~-~~t~  118 (197)
                      |.|..|.+.++.... +.+.
T Consensus        91 A~n~~G~s~~S~~~~~v~t~  110 (117)
T 1uem_A           91 AINPQGLSDPSPMSDPVRTQ  110 (117)
T ss_dssp             EEETTEEEEECCCCCCEECC
T ss_pred             EECCCccCCCcCCCccEEcc
Confidence            999999887766554 5543

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.61  E-value=1.2e-14  Score=91.00  Aligned_cols=94  Identities=21%  Similarity=0.405  Sum_probs=78.0

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ...|.+|. +.+...+.+++.|.|.++.+++.+|..|.|+++...  ..|..+. ....+.+++.+|.|++.|.|+|+|.
T Consensus        15 ~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~   93 (118)
T 1x3d_A           15 SCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-MGSQKQFKITKLSPAMGCKFRLSAR   93 (118)
T ss_dssp             CSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-EESCSEEEEESCCTTCEEEEECCEE
T ss_pred             CCCCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee-ccCCcEEEeCCCCCCCEEEEEEEEE
Confidence            35677886 888888999999999999877788999999998432  5787654 2345789999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCC
Q psy9139         102 NSIGESKPSKTIAASTKG  119 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~  119 (197)
                      |..|.+.++..+.+.|..
T Consensus        94 n~~G~s~~S~~~~~~T~~  111 (118)
T 1x3d_A           94 NDYGTSGFSEEVLYYTSG  111 (118)
T ss_dssp             ESSCBCCCCCCEEEECSC
T ss_pred             ECCCCCCCccCEEEEcCC
Confidence            999999999888777653

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=1.4e-14  Score=90.03  Aligned_cols=95  Identities=18%  Similarity=0.171  Sum_probs=75.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccc----cEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAII----THYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i----~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      .+|.+|. +++...+.+++.|+|.++...+..+    .+|.|+|+.. ...+....+....+.++|.+|+|++.|.|+|+
T Consensus         7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~   86 (113)
T 1x5j_A            7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVM   86 (113)
T ss_dssp             CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEE
T ss_pred             CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEEE
Confidence            5788897 9999999999999999876444443    4999999742 22333333455677899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecCCC
Q psy9139         100 LVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      |.+..|.+.++..+.++|...
T Consensus        87 A~~~~G~g~~S~~v~~~T~~~  107 (113)
T 1x5j_A           87 VTKGRRSSTWSMTAHGTTFEL  107 (113)
T ss_dssp             EECSSCBCCCCCCCCEECCCS
T ss_pred             EecCCccCCCcccEEeeccCC
Confidence            999999999998888888654

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=99.60  E-value=1.9e-14  Score=89.66  Aligned_cols=84  Identities=26%  Similarity=0.422  Sum_probs=64.1

Q ss_pred             cCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeC------------CcccEEEECCCCC
Q psy9139          25 LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVD------------AEYREFTLTQLKC   90 (197)
Q Consensus        25 ~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~------------~~~~~~~i~~L~p   90 (197)
                      ..+|++|.  +...+.+++.|.|.+|.+.+.+|.+|.|+++..  ...|..+...            ...+.++|.+|.|
T Consensus         3 ~~pP~~P~--v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p   80 (115)
T 2ic2_A            3 TYPPTPPN--VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKP   80 (115)
T ss_dssp             CCCCCCCE--EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCS
T ss_pred             cCCCCcCE--eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCC
Confidence            46788886  567889999999999987778899999999854  4678765421            2345789999999


Q ss_pred             CCEEEEEEEEEcCCcCCCCC
Q psy9139          91 GTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        91 ~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ++.|.|||.|.|..|.+.+|
T Consensus        81 ~t~Y~FRV~A~N~~G~~~pS  100 (115)
T 2ic2_A           81 QHTYRFRILAVYSNNDNKES  100 (115)
T ss_dssp             SEEEEEEEEEEETTSCEEEC
T ss_pred             CCEEEEEEEEEeCCCCCCCC
Confidence            99999999999999985443

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=2e-14  Score=88.40  Aligned_cols=91  Identities=21%  Similarity=0.365  Sum_probs=74.8

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ..|.+|.+.+...+.+++.|.|.++.+.++.+.+|.|+|+. ....|....+....+.++|.+|.|++.|.|+|.|.|..
T Consensus         6 ~~P~~p~~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   85 (107)
T 2dn7_A            6 SGPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRA   85 (107)
T ss_dssp             CCCCCCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETT
T ss_pred             CCCCCCcEeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence            45666656666678899999999998777789999999984 44567777777778899999999999999999999999


Q ss_pred             cCCCCCCceEeec
Q psy9139         105 GESKPSKTIAAST  117 (197)
Q Consensus       105 g~~~~s~~~~~~t  117 (197)
                      |.+.++. ..+.|
T Consensus        86 G~g~~s~-~~~~T   97 (107)
T 2dn7_A           86 GLGEEFE-KEIRT   97 (107)
T ss_dssp             EEEEEEE-EEEEC
T ss_pred             cccCCee-eEEeC
Confidence            9988776 44444

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=5.2e-15  Score=91.74  Aligned_cols=92  Identities=30%  Similarity=0.475  Sum_probs=73.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEe-CCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHV-DAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .+|.+|. ..+...+.+++.|.|.++. +++.+|.+|.|+++. ..+.|..+.. ....+.+++.+|.|++.|.|+|+|.
T Consensus         9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   88 (112)
T 1bpv_A            9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK   88 (112)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred             CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEE
Confidence            4666665 6677789999999999764 667789999999985 4567876542 3456789999999999999999999


Q ss_pred             cCCcC-CCCCCceEeec
Q psy9139         102 NSIGE-SKPSKTIAAST  117 (197)
Q Consensus       102 ~~~g~-~~~s~~~~~~t  117 (197)
                      |..|. +.++......+
T Consensus        89 N~~G~~s~~S~~~~~~t  105 (112)
T 1bpv_A           89 NAAGAISPPSEPSDAIT  105 (112)
T ss_dssp             CTTSCEEEEEEEEEEEC
T ss_pred             ECCCCCCCCCCCCCCEE
Confidence            99997 88876655443

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=5.1e-15  Score=91.59  Aligned_cols=93  Identities=23%  Similarity=0.270  Sum_probs=73.6

Q ss_pred             CCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      +|.+|.  +.....+.+++.|.|.++.+.+++|.+|.|+++. ..+.|..+. ....+.++|.+|.|++.|.|+|+|.|.
T Consensus         9 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~n~   87 (110)
T 2db8_A            9 VPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY-VGKETMCTVDGLHFNSTYNARVKAFNK   87 (110)
T ss_dssp             CCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE-EESCSCEEEECCCSSSCCEEEEEEECS
T ss_pred             CCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE-eCCcCEEEECCCCCCCEEEEEEEEEeC
Confidence            455554  2233457899999999998766889999999984 346787655 335677999999999999999999999


Q ss_pred             CcCCCCCCceEeecCCC
Q psy9139         104 IGESKPSKTIAASTKGE  120 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~~  120 (197)
                      .|.+.++..+.+.|...
T Consensus        88 ~G~s~~S~~~~~~T~~~  104 (110)
T 2db8_A           88 TGVSPYSKTLVLQTSEG  104 (110)
T ss_dssp             SCBCCCCSCEECCCCCC
T ss_pred             CcCCCCCCCEEEEcCCC
Confidence            99999998888877543

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=99.59  E-value=3.9e-14  Score=86.54  Aligned_cols=89  Identities=24%  Similarity=0.382  Sum_probs=73.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|.+|. +.+...+.+++.|+|.++.+.++.+.+|.|.|...  .+.+....+....++++|.+|.|++.|.|+|+|.|
T Consensus         6 t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~   85 (103)
T 3t04_D            6 SVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYD   85 (103)
T ss_dssp             CCCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred             ccCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            4577887 88889999999999999887677899999999853  23455566677788999999999999999999999


Q ss_pred             C--CcCCCCCCceEe
Q psy9139         103 S--IGESKPSKTIAA  115 (197)
Q Consensus       103 ~--~g~~~~s~~~~~  115 (197)
                      .  .|.+. +.++.+
T Consensus        86 ~~~~G~~~-S~p~~~   99 (103)
T 3t04_D           86 TFFPGYEP-NSPISI   99 (103)
T ss_dssp             CCCTTCCC-SCCEEE
T ss_pred             CCCCCCCC-CCCEEE
Confidence            9  88776 555544

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.59  E-value=1.2e-14  Score=89.77  Aligned_cols=93  Identities=25%  Similarity=0.369  Sum_probs=73.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCc-cccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGA-IITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~-~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .+|.+|. +.+...+.+++.|.|.++.+.++ +|.+|.|+++...  ..|..+. ....+.++|.+|.|++.|.|+|+|.
T Consensus         6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~   84 (109)
T 1x5x_A            6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY-DGEDLAYTVKNLRRSTKYKFKVIAY   84 (109)
T ss_dssp             CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE-EESCSEEEEESCCSSCEEEEEEEEE
T ss_pred             CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE-eCCccEEEECCCCCCCEEEEEEEEE
Confidence            3566665 56777889999999999875555 7999999998433  3565443 3346789999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCC
Q psy9139         102 NSIGESKPSKTIAASTKG  119 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~  119 (197)
                      |..|.+.++..+.+.|..
T Consensus        85 n~~G~s~~S~~~~~~T~~  102 (109)
T 1x5x_A           85 NSEGKSNPSEVVEFTTCP  102 (109)
T ss_dssp             CSSCEEEECCCEEEECCC
T ss_pred             eCCCCcCCccCEEeEeCC
Confidence            999999888887777643

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=99.59  E-value=5.1e-14  Score=86.74  Aligned_cols=91  Identities=24%  Similarity=0.357  Sum_probs=75.3

Q ss_pred             CCCCCCE-EEEEe--ecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQS--TTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~--~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..|.+|. +.+..  .+.+++.|.|.++.+.++.|.+|.|+|+. ....|.....  ..+.++|.+|.|++.|.|+|+|.
T Consensus         6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~l~~L~p~t~Y~~~V~A~   83 (108)
T 2dm4_A            6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA--ASNFTEIKNLLVNTLYTVRVAAV   83 (108)
T ss_dssp             CCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE--SSSEEEECSCCSSCEEEEEEEEE
T ss_pred             CCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC--CccEEEeCCCCCCCEEEEEEEEE
Confidence            4678887 66554  57899999999998777889999999984 4455776543  35689999999999999999999


Q ss_pred             cCCcCCCCCCceEeecC
Q psy9139         102 NSIGESKPSKTIAASTK  118 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~  118 (197)
                      |..|.+.++..+.++|.
T Consensus        84 n~~G~g~~S~~~~~~T~  100 (108)
T 2dm4_A           84 TSRGIGNWSDSKSITTI  100 (108)
T ss_dssp             ESSCEEEECCCEEEECC
T ss_pred             CCCceeCCCCCEEEECC
Confidence            99999999888888774

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=2.5e-14  Score=89.35  Aligned_cols=85  Identities=26%  Similarity=0.542  Sum_probs=70.4

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ..|.+|. +.+...+ +++.|.|.+|.+.++.|.+|.|+|+.....+....+....+.++|.+|.|++.|.|+|+|.|..
T Consensus        16 ~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~   94 (116)
T 2edb_A           16 QVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNA   94 (116)
T ss_dssp             SCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESSTTSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETT
T ss_pred             CCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCC
Confidence            4677886 8888887 9999999999876788999999998544444444556777899999999999999999999999


Q ss_pred             cCCCCCC
Q psy9139         105 GESKPSK  111 (197)
Q Consensus       105 g~~~~s~  111 (197)
                      |.+.++.
T Consensus        95 G~g~~~~  101 (116)
T 2edb_A           95 GEGVPLY  101 (116)
T ss_dssp             EECSCEE
T ss_pred             ccCCCCc
Confidence            9987653

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.59  E-value=3.6e-14  Score=89.13  Aligned_cols=93  Identities=26%  Similarity=0.532  Sum_probs=75.1

Q ss_pred             cCCCCCCE-EEEE-eecCCeEEEEeeeCCCC-CccccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQ-STTTHSISILWKPSYDG-GAIITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        25 ~~~P~~p~-~~~~-~~~~~~~~l~W~~~~~~-~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      ...|.+|. +.+. ..+.+++.|.|.++.+. +.+|.+|.|+++...  ..|..+. ....+.+++.+|.|++.|.|+|+
T Consensus        15 ~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~   93 (120)
T 2crm_A           15 PDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-SGATREHLCDRLNPGCFYRLRVY   93 (120)
T ss_dssp             CCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-CSSCSEEEECSCCTTSCEEEEEE
T ss_pred             CCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-eccccEEEECCCCCCCEEEEEEE
Confidence            45677775 5555 67889999999998754 567999999998533  4787765 34577899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecC
Q psy9139         100 LVNSIGESKPSKTIAASTK  118 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~  118 (197)
                      |.|..|.+.++..+.+.|.
T Consensus        94 A~n~~G~s~~S~~~~~~T~  112 (120)
T 2crm_A           94 CISDGGQSAVSESLLVQTP  112 (120)
T ss_dssp             EEETTEECCCCCCCCCCCC
T ss_pred             EEcCCccCCCcccEEEEcC
Confidence            9999999999887777664

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=99.58  E-value=1.9e-14  Score=90.67  Aligned_cols=93  Identities=20%  Similarity=0.267  Sum_probs=71.1

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCc-cccEEEEEEEe-CCCCcEEE----EeCCcccEEEECCCCCCCEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGA-IITHYIVSYRD-RTEDWQSV----HVDAEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~-~i~~y~v~~~~-~~~~~~~~----~~~~~~~~~~i~~L~p~~~y~~~   97 (197)
                      ...|.+|. +.+...+.+ +.|.|.+|.+.++ +|.+|.|+|+. ....|...    ......+.++|.+|.|++.|.|+
T Consensus         5 ~~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r   83 (122)
T 2e3v_A            5 SSGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR   83 (122)
T ss_dssp             -CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEE
T ss_pred             CcCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEE
Confidence            35688787 666666666 9999999864444 59999999984 44567332    12245678999999999999999


Q ss_pred             EEEEcCCcCCCCCCceEeecC
Q psy9139          98 IKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        98 v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      |.|.|..|.+.++....+++.
T Consensus        84 V~A~n~~G~g~~S~~~~~~t~  104 (122)
T 2e3v_A           84 LAALNGKGLGEISAASEFKTQ  104 (122)
T ss_dssp             EEEEETTEECCCCCCEEEECC
T ss_pred             EEEEeCCccCCCccccccccc
Confidence            999999999999888777553

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=6.1e-14  Score=86.02  Aligned_cols=93  Identities=26%  Similarity=0.413  Sum_probs=75.8

Q ss_pred             ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          24 ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        24 ~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ...+|.+|. +.+...+.+++.|.|.++.  +..+.+|.|+|+..  ...|..+. ....+.++|.+|.|++.|.|+|+|
T Consensus         4 ~~~~P~~P~~~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A   80 (106)
T 2dju_A            4 GSSGPKPPIDLVVTETTATSVTLTWDSGN--SEPVTYYGIQYRAAGTEGPFQEVD-GVATTRYSIGGLSPFSEYAFRVLA   80 (106)
T ss_dssp             CCCSCCCCEEEEEEEEETTEEEEEEECCC--SSCCSEEEEEEEETTCCSCCCCBC-CCCSSEEEEESCCTTCEEEEEEEE
T ss_pred             CCcCCcCCCCcEEEeccCCEEEEEEcCCC--CCCceEEEEEEEECCCCCCeEEcc-CCCccEEEEeCCCCCcEEEEEEEE
Confidence            356788897 8888889999999999873  56789999999843  23565432 345678999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++..+.+.|..
T Consensus        81 ~n~~G~~~~S~~~~~~T~~   99 (106)
T 2dju_A           81 VNSIGRGPPSEAVRARTGE   99 (106)
T ss_dssp             ECSSCBCCCCCCEEEECCC
T ss_pred             EeCCccCCCcccEEeEcCC
Confidence            9999999999888877754

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.58  E-value=1.7e-13  Score=83.96  Aligned_cols=89  Identities=15%  Similarity=0.180  Sum_probs=74.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .+|.+|. +.+...+.+++.|+|.++.   ..+.+|+|+|+...+.|..+.+....++++|.+|.|++.|.|+|.|.|..
T Consensus         6 t~p~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~   82 (105)
T 2cum_A            6 SGLEAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQ   82 (105)
T ss_dssp             TTCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTT
T ss_pred             cCCCCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCCceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            5788887 8899999999999999875   36899999998666678777777788999999999999999999999999


Q ss_pred             cCCCCCCceEeecC
Q psy9139         105 GESKPSKTIAASTK  118 (197)
Q Consensus       105 g~~~~s~~~~~~t~  118 (197)
                      |.+.+. ...+.|.
T Consensus        83 g~s~~~-~~~~~T~   95 (105)
T 2cum_A           83 SLLPPV-STSFTTG   95 (105)
T ss_dssp             BCCCCE-EEEEECC
T ss_pred             cccCCE-EEEEEeC
Confidence            887763 3455553

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=4.5e-14  Score=87.30  Aligned_cols=89  Identities=27%  Similarity=0.444  Sum_probs=73.2

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEe-CCcccEEEECCCCCCCEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHV-DAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..+|.+|. +.+...+.+++.|.|.++. +++.++.+|.|+++. ....|..+.. ....+.+++.+|.|++.|.|+|+|
T Consensus         5 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   84 (110)
T 2yuw_A            5 SSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA   84 (110)
T ss_dssp             CCCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence            35788897 8888899999999999986 455679999999984 4456776542 346788999999999999999999


Q ss_pred             EcCCcCCCCCCce
Q psy9139         101 VNSIGESKPSKTI  113 (197)
Q Consensus       101 ~~~~g~~~~s~~~  113 (197)
                      .|..|.+.++...
T Consensus        85 ~n~~G~s~~S~~~   97 (110)
T 2yuw_A           85 VNAAGASEPKYYS   97 (110)
T ss_dssp             EETTEECCCEECS
T ss_pred             EcCCcCCCCcCCC
Confidence            9999998877543

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.57  E-value=4.6e-14  Score=89.41  Aligned_cols=85  Identities=27%  Similarity=0.519  Sum_probs=71.8

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .|.+|. +.+...+ +++.|.|.++.+.++.|.+|.|+|+.....+....+....+.++|.+|.|++.|.|+|+|.|..|
T Consensus        27 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  105 (126)
T 1x5i_A           27 VPEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVG  105 (126)
T ss_dssp             CCCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSC
T ss_pred             CCCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCc
Confidence            678885 8877776 99999999998777889999999984444555566677788999999999999999999999999


Q ss_pred             CCCCCCc
Q psy9139         106 ESKPSKT  112 (197)
Q Consensus       106 ~~~~s~~  112 (197)
                      .+.++..
T Consensus       106 ~g~~s~~  112 (126)
T 1x5i_A          106 EGIPLYE  112 (126)
T ss_dssp             BCCCCCC
T ss_pred             cCcceee
Confidence            9987754

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.57  E-value=9.5e-14  Score=95.57  Aligned_cols=115  Identities=20%  Similarity=0.298  Sum_probs=87.3

Q ss_pred             eEEEEEEeCCCCceeEEEEEec---CCCC-CCE-EEEEee--cCCeEEEEeeeCCCCCccccEEEEEEEeCCC----CcE
Q psy9139           4 NYTCLADNIFGKDDIYYQVTIL---SPPG-VPN-ILLQST--TTHSISILWKPSYDGGAIITHYIVSYRDRTE----DWQ   72 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~---~~P~-~p~-~~~~~~--~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----~~~   72 (197)
                      .|++.|.|..|....+..+.+.   ..|. +|. +.+...  +.+++.|.|.++.+.++.+.+|.|+|+....    .|.
T Consensus        78 ~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~  157 (211)
T 3p4l_A           78 EFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV  157 (211)
T ss_dssp             EEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSE
T ss_pred             EEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceE
Confidence            3566778998865433323332   3444 776 776666  4789999999988777789999999984322    345


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      ...+....+.++|.+|.|++.|.|+|.|.|..|.|.++..+.+.+.
T Consensus       158 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~  203 (211)
T 3p4l_A          158 IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP  203 (211)
T ss_dssp             EEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC
T ss_pred             EEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCc
Confidence            5555677889999999999999999999999999999998887764

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=8.1e-14  Score=87.36  Aligned_cols=92  Identities=27%  Similarity=0.403  Sum_probs=75.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC---CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT---EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .|+.+|. +.+...+.+++.|.|.++..  +.|.+|.|+|+...   ..+..+.+......++|.+|.|++.|.|+|+|.
T Consensus        17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   94 (119)
T 2ee2_A           17 APSEAPTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGAC   94 (119)
T ss_dssp             CCCCCCCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCCCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEEEEEEEEE
Confidence            3445775 88888899999999999876  67899999997432   234455555667799999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCC
Q psy9139         102 NSIGESKPSKTIAASTKG  119 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~  119 (197)
                      |..|.+.++..+.++|..
T Consensus        95 n~~G~g~~S~~~~~~T~~  112 (119)
T 2ee2_A           95 NSAGCGPPSDMIEAFTKK  112 (119)
T ss_dssp             CSSSCCCCCCCEEEECCC
T ss_pred             cCCccCCCCCCEEEECCC
Confidence            999999999888888754

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.57  E-value=5e-14  Score=87.24  Aligned_cols=88  Identities=25%  Similarity=0.490  Sum_probs=72.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEe-CCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHV-DAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .+|.+|. +.+...+.+++.|.|.++. +++.++.+|.|+++. ....|..+.. ....+.+++.+|.|++.|.|+|+|.
T Consensus         7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   86 (111)
T 1x5y_A            7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGV   86 (111)
T ss_dssp             SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEE
T ss_pred             CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEE
Confidence            5788887 8888899999999999986 444569999999984 4456775432 2456789999999999999999999


Q ss_pred             cCCcCCCCCCce
Q psy9139         102 NSIGESKPSKTI  113 (197)
Q Consensus       102 ~~~g~~~~s~~~  113 (197)
                      |..|.+.++...
T Consensus        87 n~~G~s~~S~~~   98 (111)
T 1x5y_A           87 NIAGRSEPATLL   98 (111)
T ss_dssp             ETTEECCCCCCS
T ss_pred             cCCcCCCCccCC
Confidence            999998887654

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=99.57  E-value=1.3e-13  Score=83.66  Aligned_cols=83  Identities=25%  Similarity=0.332  Sum_probs=69.5

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      +|.+|. +.+...+.+++.|.|.+|..   ++.+|.|+|+..  .+.+....+....+.++|.+|.|++.|.|+|.|.|.
T Consensus         1 ~p~~P~~l~~~~~~~~sv~lsW~pP~~---~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~   77 (100)
T 3b83_A            1 MLQPPFNIKVTNITLTTAVVTWQPPIL---PIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNG   77 (100)
T ss_dssp             CCCCCEEEEEESCCSSCEEEEEECCSS---CCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCccCCccEEEEecCCEEEEEEcCCcc---cCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeC
Confidence            477887 88888999999999998862   689999999842  345555567788889999999999999999999999


Q ss_pred             CcCCCCCCc
Q psy9139         104 IGESKPSKT  112 (197)
Q Consensus       104 ~g~~~~s~~  112 (197)
                      .|.+.++..
T Consensus        78 ~g~s~p~~~   86 (100)
T 3b83_A           78 QQYSPPVST   86 (100)
T ss_dssp             TEECCCEEE
T ss_pred             CCCCCCEEE
Confidence            998877543

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=5.3e-14  Score=88.69  Aligned_cols=94  Identities=21%  Similarity=0.240  Sum_probs=74.0

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccc----cEEEEEEEeC---CCCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAII----THYIVSYRDR---TEDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i----~~y~v~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      ..+|.+|. +++...+.+++.|.|.++...+..+    .+|.|+|+..   ...|..+  ....+.++|.+|+|++.|.|
T Consensus        16 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~--~~~~~~~~v~gL~P~T~Y~f   93 (123)
T 2edd_A           16 STPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSE--DTTSLSYTATGLKPNTMYEF   93 (123)
T ss_dssp             CCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCE--EESSSEEEEESCCTTCEEEE
T ss_pred             CCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEE--eCCceEEEecCCCCCCEEEE
Confidence            35778887 8899999999999999875434333    4899999843   2233332  33467899999999999999


Q ss_pred             EEEEEcCCcCCCCCCceEeecCCC
Q psy9139          97 NIKLVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus        97 ~v~a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      +|+|.|..|.+.++..+.++|...
T Consensus        94 ~V~A~n~~g~g~~S~~v~~~T~~~  117 (123)
T 2edd_A           94 SVMVTKNRRSSTWSMTAHATTYEA  117 (123)
T ss_dssp             EEEECCSSSCCCCCCCEEEECCCS
T ss_pred             EEEEeCCCcccCCCCCEEEEccCC
Confidence            999999999999999888888654

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.56  E-value=4.6e-14  Score=88.06  Aligned_cols=92  Identities=23%  Similarity=0.370  Sum_probs=75.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|.|.++.+.++.+.+|.|+|+. ....|..+.  ...+.++|.+|.|++.|.|+|+|.|.
T Consensus        16 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~   93 (116)
T 1x5g_A           16 QLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVD--VSSHSYTINGLKKYTEYSFRVVAYNK   93 (116)
T ss_dssp             SCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEE--ECSSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEe--cCCceEEEcCCCCCCEEEEEEEEEcC
Confidence            4677776 8888889999999999987667789999999984 334453333  34678999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.+.++..+.++|..
T Consensus        94 ~G~g~~S~~~~~~T~~  109 (116)
T 1x5g_A           94 HGPGVSTPDVAVRTLS  109 (116)
T ss_dssp             SCCCCBCCCCCEECCC
T ss_pred             CCcCCCCCCEEEECCC
Confidence            9999988888777753

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.56  E-value=1.9e-13  Score=93.65  Aligned_cols=115  Identities=20%  Similarity=0.313  Sum_probs=87.4

Q ss_pred             EEEEEEeCCCCceeE---EEEEe--cCCCCCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEe--CCCCcEEE
Q psy9139           5 YTCLADNIFGKDDIY---YQVTI--LSPPGVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRD--RTEDWQSV   74 (197)
Q Consensus         5 y~c~a~n~~G~~~~~---~~~~~--~~~P~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~--~~~~~~~~   74 (197)
                      |++.|.|..|....+   ..+..  ..|+.+|. +.+...+.+++.|.|.++.  +.++.+.+|.|+|+.  ....|...
T Consensus        77 ~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~  156 (205)
T 1cfb_A           77 FRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN  156 (205)
T ss_dssp             EEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE
T ss_pred             EEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEE
Confidence            567788999854333   22222  23445675 7888888899999999986  677789999999984  23348776


Q ss_pred             EeCC-cccEEEECCCCCCCEEEEEEEEEcCCcCCCC-CCceEeecCC
Q psy9139          75 HVDA-EYREFTLTQLKCGTHYKINIKLVNSIGESKP-SKTIAASTKG  119 (197)
Q Consensus        75 ~~~~-~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~-s~~~~~~t~~  119 (197)
                      .+.. ..+.++|.+|.|++.|.|+|.|.|..|.+.+ +..+.+.|.+
T Consensus       157 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e  203 (205)
T 1cfb_A          157 NIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE  203 (205)
T ss_dssp             EECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSS
T ss_pred             EecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCC
Confidence            6543 5788999999999999999999999999984 6677777754

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.55  E-value=4.6e-14  Score=97.43  Aligned_cols=116  Identities=20%  Similarity=0.300  Sum_probs=85.8

Q ss_pred             eEEEEEEeCCCCcee-EEEEE--ecCCCCCCE-EEEEee--cCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEe
Q psy9139           4 NYTCLADNIFGKDDI-YYQVT--ILSPPGVPN-ILLQST--TTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHV   76 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~~--~~~~P~~p~-~~~~~~--~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~   76 (197)
                      .|++.|.|..|.... ...+.  ...+|.+|. +.+...  +.+++.|.|.++...++.+.+|.|+|+.. ...|..+..
T Consensus        77 ~~~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~  156 (215)
T 1bqu_A           77 EVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP  156 (215)
T ss_dssp             EEEEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG
T ss_pred             EEEEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc
Confidence            467889999997542 22221  124688887 666554  67999999999875556789999999853 467776542


Q ss_pred             ---CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC---CCCceEeecCC
Q psy9139          77 ---DAEYREFTLTQLKCGTHYKINIKLVNSIGESK---PSKTIAASTKG  119 (197)
Q Consensus        77 ---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~---~s~~~~~~t~~  119 (197)
                         ....+.++|.+|.|++.|.|+|+|.|..|.+.   ++..+.+.|..
T Consensus       157 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~  205 (215)
T 1bqu_A          157 EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE  205 (215)
T ss_dssp             GGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred             ccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence               45677899999999999999999999988755   55566666643

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=2.1e-14  Score=87.65  Aligned_cols=91  Identities=29%  Similarity=0.427  Sum_probs=74.2

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeCCC-CcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDRTE-DWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .+|.+|. +.+...+.+++.|.|.++  .+.++.+.+|.|+|+.... .|..  .....+.+.|.+|.|++.|.|+|+|.
T Consensus         7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~   84 (103)
T 2edy_A            7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQ--NITTDTRFTLTGLKPDTTYDIKVRAW   84 (103)
T ss_dssp             CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEE--EEESSSCCEECSCCTTCCEEEECCEE
T ss_pred             CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEE--EcCCcceEEEcCCCCCCEEEEEEEEE
Confidence            5678886 888888899999999998  4556789999999985433 3333  23456779999999999999999999


Q ss_pred             cCCcCCCCCCceEeecC
Q psy9139         102 NSIGESKPSKTIAASTK  118 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~  118 (197)
                      |..|.+.++..+.++|.
T Consensus        85 n~~G~g~~S~~~~~~T~  101 (103)
T 2edy_A           85 TSKGSGPLSPSIQSRTM  101 (103)
T ss_dssp             CSSCBCCCCCCCCCCCC
T ss_pred             CCCCCCCCCCCEEEEec
Confidence            99999999888877764

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=99.54  E-value=1.9e-13  Score=83.60  Aligned_cols=88  Identities=18%  Similarity=0.314  Sum_probs=72.4

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .|++|. +.+...+.+++.|+|.++.   +.+.+|.|.|+.  ..+.+....+....+.++|.+|.|++.|.|+|.|.+.
T Consensus         2 ~p~~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~   78 (104)
T 2rb8_A            2 RLDAPSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG   78 (104)
T ss_dssp             CCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence            578887 8899999999999999875   568999999974  2456777667778889999999999999999999999


Q ss_pred             CcCCCCCCceEeecC
Q psy9139         104 IGESKPSKTIAASTK  118 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~  118 (197)
                      .|.+.+.. ..+.|.
T Consensus        79 ~g~s~p~~-~~~~T~   92 (104)
T 2rb8_A           79 DMSSNPAK-ETFTTG   92 (104)
T ss_dssp             TEECCCEE-EEEECC
T ss_pred             CccCCCEE-EEEECC
Confidence            99887643 445553

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.54  E-value=8.5e-13  Score=91.07  Aligned_cols=150  Identities=14%  Similarity=0.116  Sum_probs=95.1

Q ss_pred             CCCCCCE-EEEEee-cCCeEEEEeeeCCCCCccccEEEEEEEeCCC-------CcEEEEe--CCcccEEEECCCCCCCEE
Q psy9139          26 SPPGVPN-ILLQST-TTHSISILWKPSYDGGAIITHYIVSYRDRTE-------DWQSVHV--DAEYREFTLTQLKCGTHY   94 (197)
Q Consensus        26 ~~P~~p~-~~~~~~-~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-------~~~~~~~--~~~~~~~~i~~L~p~~~y   94 (197)
                      .+|++|. +.+... ..+++.+.|.++.+++.+ ..|.|.++....       .+..+..  ......+.+.+|.+++.|
T Consensus         3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y   81 (215)
T 1cd9_B            3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLP-TSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM   81 (215)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred             CCCCCCeeeeeecCCCcccEEEEecCCCCCCCc-eeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEE
Confidence            5889998 777766 678999999998776554 569999984321       2333321  223456777899999999


Q ss_pred             EEEEEEEcCCcCCCCCCceEee--------------cCC-------CC---CCCeeecC------------------CCC
Q psy9139          95 KINIKLVNSIGESKPSKTIAAS--------------TKG-------ED---QTDWINIP------------------LSN  132 (197)
Q Consensus        95 ~~~v~a~~~~g~~~~s~~~~~~--------------t~~-------~~---~~~w~~~~------------------~~~  132 (197)
                      .|+|.|.|..|.+.. ..+.+.              ...       ..   ...|....                  ...
T Consensus        82 ~~~V~A~N~~G~~~s-~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~  160 (215)
T 1cd9_B           82 AIWVQAENMLGSSES-PKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGAN  160 (215)
T ss_dssp             EEEEEEEETTEEEEC-CCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCC
T ss_pred             EEEEEEECCCCCccC-ccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCC
Confidence            999999999886422 111111              110       01   11222111                  000


Q ss_pred             Cc-----ccccceEEEcCCCCCCeEEEEEEEEcCCCCC---CcceEEEEeeeC
Q psy9139         133 LD-----EALEMPLVIENLLPATRYELTISAKNDAGST---NKNYVFATLSVN  177 (197)
Q Consensus       133 ~~-----~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~---~~~~~~~t~~~~  177 (197)
                      ..     ......+.+.+|+|++.|.|+|+|.+..|.|   +.+..+...|.+
T Consensus       161 w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e  213 (215)
T 1cd9_B          161 WTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM  213 (215)
T ss_dssp             CEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred             cEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence            00     0124568999999999999999999987765   455555555543

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.8e-14  Score=87.88  Aligned_cols=92  Identities=12%  Similarity=0.271  Sum_probs=74.3

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeC-CcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVD-AEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~-~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ...|.+|. +.+...+.+++.|.|.++.+. +.|.+|.|+|+. ....|..+.+. ...+.++|.+|.|++.|.|+|+|.
T Consensus        15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   93 (118)
T 2yrz_A           15 AGVPDTPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQ   93 (118)
T ss_dssp             CSCCCCCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEEEEEEE
T ss_pred             CCCCCCCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence            35677776 888888999999999998765 478999999984 44567766554 567889999999999999999999


Q ss_pred             cCCcCCCCCC-ceEeec
Q psy9139         102 NSIGESKPSK-TIAAST  117 (197)
Q Consensus       102 ~~~g~~~~s~-~~~~~t  117 (197)
                      |..|.+.++. .+.+.+
T Consensus        94 n~~G~g~~S~~~~~~~t  110 (118)
T 2yrz_A           94 SQEGWGREREGVITIES  110 (118)
T ss_dssp             ESSCEEEEEEEEEECCC
T ss_pred             cCCcCCCCcCCceEeCC
Confidence            9999988776 344444

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=99.54  E-value=8.7e-13  Score=99.82  Aligned_cols=177  Identities=13%  Similarity=0.075  Sum_probs=105.9

Q ss_pred             eEEEEEEeCCCCceeEEEEE----ecCCCCCCEEEEEeecCCeEEEEeeeCCCCC-------ccccEEEEEEEeCCC-Cc
Q psy9139           4 NYTCLADNIFGKDDIYYQVT----ILSPPGVPNILLQSTTTHSISILWKPSYDGG-------AIITHYIVSYRDRTE-DW   71 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~----~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~-------~~i~~y~v~~~~~~~-~~   71 (197)
                      .+++.|.| .|.+..+....    ....+.+|.+.+.. ..+++.|.|. |...+       ..+.+|.|.|+.... ..
T Consensus        79 ~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~  155 (414)
T 3se4_A           79 KLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPEVHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVE  155 (414)
T ss_dssp             EEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCEEEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCE
T ss_pred             EEEEEEee-CCcCCCEecCceeecccceeCCCeEEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCce
Confidence            35667889 44222211111    12455777755543 3568999999 54222       356789999884332 22


Q ss_pred             EEEEeCCcccEEEECCCCCCCEEEEEEEEEcC--CcCCCCCCceEeecCCCC-----------------CCCeeecC---
Q psy9139          72 QSVHVDAEYREFTLTQLKCGTHYKINIKLVNS--IGESKPSKTIAASTKGED-----------------QTDWINIP---  129 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~--~g~~~~s~~~~~~t~~~~-----------------~~~w~~~~---  129 (197)
                      ..  .......+.|.+|.|++.|.|+|+|.|.  .|.+.++....+.+...+                 ...|....   
T Consensus       156 ~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~~~~~l~W~pp~~~~  233 (414)
T 3se4_A          156 ER--IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANM  233 (414)
T ss_dssp             EE--EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEETTEEEEEEECSSSSC
T ss_pred             EE--EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEecCCeEEEECCCCCCe
Confidence            22  2345678999999999999999999994  566777766666654321                 12232110   


Q ss_pred             ------------------CCC-----C-cccccceEEEc-CCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCCC
Q psy9139         130 ------------------LSN-----L-DEALEMPLVIE-NLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHS  184 (197)
Q Consensus       130 ------------------~~~-----~-~~~~~~~~~i~-~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p~  184 (197)
                                        ...     . .......+.++ +|.+++.|.|+|+|.|..|.|+.+......+.++.++.||
T Consensus       234 ~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP  313 (414)
T 3se4_A          234 TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPP  313 (414)
T ss_dssp             EEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC------
T ss_pred             EEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCC
Confidence                              000     0 00113456676 6999999999999999999998765555666666544444


Q ss_pred             C
Q psy9139         185 W  185 (197)
Q Consensus       185 ~  185 (197)
                      .
T Consensus       314 ~  314 (414)
T 3se4_A          314 V  314 (414)
T ss_dssp             -
T ss_pred             e
Confidence            3

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.54  E-value=8.6e-15  Score=102.44  Aligned_cols=119  Identities=18%  Similarity=0.215  Sum_probs=71.1

Q ss_pred             CCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCC-C---------
Q psy9139          52 DGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE-D---------  121 (197)
Q Consensus        52 ~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~-~---------  121 (197)
                      +.+..|++|.|++......+.........+.+++.+|.|++.|.|+|+|.|..|.+.++....+.+... +         
T Consensus        17 ~~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~   96 (232)
T 4go6_B           17 GTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKI   96 (232)
T ss_dssp             SSEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEE
T ss_pred             CCCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEE
Confidence            334568889888764444444444445567899999999999999999999999988887776655322 1         


Q ss_pred             -------CCCeeecCCCCCcc------------------------------------------cccceEEEcCCCCCCeE
Q psy9139         122 -------QTDWINIPLSNLDE------------------------------------------ALEMPLVIENLLPATRY  152 (197)
Q Consensus       122 -------~~~w~~~~~~~~~~------------------------------------------~~~~~~~i~~L~p~t~Y  152 (197)
                             .+.|..........                                          .....+.+.+|.+++.|
T Consensus        97 ~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y  176 (232)
T 4go6_B           97 SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAI  176 (232)
T ss_dssp             EEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEE
T ss_pred             ecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCce
Confidence                   34554432211000                                          00001123478999999


Q ss_pred             EEEEEEEcCCCCCCcceE
Q psy9139         153 ELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       153 ~v~V~a~n~~G~~~~~~~  170 (197)
                      .|+|+|.|.+|.|+.+..
T Consensus       177 ~frV~A~N~~G~Gp~S~v  194 (232)
T 4go6_B          177 IFRIAARNEKGYGPATQV  194 (232)
T ss_dssp             EEEEEEECSSCBCCCEEE
T ss_pred             EEEEEEECCCcCCCCccc
Confidence            999999999999997753

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.54  E-value=1.5e-13  Score=106.31  Aligned_cols=116  Identities=20%  Similarity=0.231  Sum_probs=88.7

Q ss_pred             eEEEEEEeCCCC---ceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           4 NYTCLADNIFGK---DDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         4 ~y~c~a~n~~G~---~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      .|++.|.|..|.   ...+..+.+...|.+|. +.....+.+++.|+|.+|.+.+++|.+|.|.|+..........+...
T Consensus       414 ~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~~~  493 (536)
T 3fl7_A          414 TFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTE  493 (536)
T ss_dssp             EEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEEES
T ss_pred             EEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEEcCC
Confidence            467788999996   34566777777777776 66677889999999999987788899999999843332222234556


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      .+.++|.+|.|++.|.|+|+|.|..|.+.+|..+.++|..
T Consensus       494 ~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~  533 (536)
T 3fl7_A          494 GFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS  533 (536)
T ss_dssp             SSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred             CCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence            7789999999999999999999999999999998888864

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.54  E-value=2.5e-14  Score=90.45  Aligned_cols=94  Identities=18%  Similarity=0.280  Sum_probs=74.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEe-CCCC---c-----EEEEeCCcccEEEECCCCCCCE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRD-RTED---W-----QSVHVDAEYREFTLTQLKCGTH   93 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~-~~~~---~-----~~~~~~~~~~~~~i~~L~p~~~   93 (197)
                      .|+.+|. +.+...+.+++.|.|.++.  ..++.|.+|.|.|+. ....   |     ..+.+....+.++|.+|.|++.
T Consensus        13 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   92 (125)
T 1uen_A           13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSH   92 (125)
T ss_dssp             CCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCE
T ss_pred             CCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCE
Confidence            3447886 8888889999999999974  356679999999983 2222   2     2344556678999999999999


Q ss_pred             EEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          94 YKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        94 y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |.|+|+|.|..|.+.++..+.++|..
T Consensus        93 Y~~~V~A~n~~G~g~~S~~~~~~T~~  118 (125)
T 1uen_A           93 YTLNVRVVNGKGEGPASPDRVFNTPE  118 (125)
T ss_dssp             EEEEEEEEESSCEEEECCCEEEECCC
T ss_pred             EEEEEEEecCCCCCCCCCCEEEECCC
Confidence            99999999999999888888887754

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=99.54  E-value=3.7e-14  Score=102.70  Aligned_cols=159  Identities=14%  Similarity=0.167  Sum_probs=102.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC--CE-----EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----C
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV--PN-----ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----T   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~--p~-----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~   68 (197)
                      ++|.|+|.|.|..|..+..+.+.+..+|..  |.     ..........+.|.|.....+..     .+.|...     .
T Consensus        73 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~i~W~~~~~~~~~  147 (305)
T 2nzi_A           73 DATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP-----VITWQKGQDLIDN  147 (305)
T ss_dssp             GCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCC-----EEEEEESSSBCCS
T ss_pred             hCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCC-----EEEEEECCEECCC
Confidence            479999999999998888888888765421  11     01222345667787765321111     3444421     1


Q ss_pred             CCcEEEEeCCcccEEEECC-CCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC--------------CCCee-------
Q psy9139          69 EDWQSVHVDAEYREFTLTQ-LKCGTHYKINIKLVNSIGESKPSKTIAASTKGED--------------QTDWI-------  126 (197)
Q Consensus        69 ~~~~~~~~~~~~~~~~i~~-L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~--------------~~~w~-------  126 (197)
                      .....+........+.|.+ +.+...+.|.|.|.|..|....+..+.+...+.+              ...|.       
T Consensus       148 ~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~  227 (305)
T 2nzi_A          148 NGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGG  227 (305)
T ss_dssp             SSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSB
T ss_pred             CCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCC
Confidence            2222333344566788988 9999999999999999987554433433322221              12232       


Q ss_pred             -------------------ecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         127 -------------------NIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       127 -------------------~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                                         .....     ....+.|.+|.+++.|.|+|+|.|..|.+.++.
T Consensus       228 ~~i~~y~v~~~~~~~~~w~~~~~~-----~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~  284 (305)
T 2nzi_A          228 SKITNYIVEKCATTAERWLRVGQA-----RETRYTVINLFGKTSYQFRVIAENKFGLSKPSE  284 (305)
T ss_dssp             SCEEEEEEEEEETTSCCEEEEEEE-----SSSEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred             CceeEEEEEEecCCCCccEECccc-----cCceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence                               22111     145789999999999999999999999998654

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.53  E-value=5.8e-14  Score=88.34  Aligned_cols=94  Identities=28%  Similarity=0.467  Sum_probs=73.9

Q ss_pred             CCC-CCCE-EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEeCC-CCc---EEEE--eCCcccEEEECCCCCCCEEE
Q psy9139          26 SPP-GVPN-ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRT-EDW---QSVH--VDAEYREFTLTQLKCGTHYK   95 (197)
Q Consensus        26 ~~P-~~p~-~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~~~-~~~---~~~~--~~~~~~~~~i~~L~p~~~y~   95 (197)
                      ..| .+|. +.+...+.+++.|.|.++..  .++.+.+|.|+|+... ..|   ....  .....+.++|.+|+|++.|.
T Consensus        13 ~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~   92 (122)
T 1va9_A           13 AAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYG   92 (122)
T ss_dssp             CCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEE
T ss_pred             CCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEE
Confidence            344 4786 88888899999999999875  5778999999998432 222   2222  23445789999999999999


Q ss_pred             EEEEEEcCCcCCCCCCceEeecCC
Q psy9139          96 INIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        96 ~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |+|+|.|..|.+.++..+.++|..
T Consensus        93 ~~V~A~n~~G~g~~S~~~~~~T~~  116 (122)
T 1va9_A           93 VVVQAFNRAGTGPSSSEINATTLE  116 (122)
T ss_dssp             EEEEEEETTEECCCCCCEECCCCS
T ss_pred             EEEEEEcCCCCCCCccCEEEEeCC
Confidence            999999999999998888877754

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.53  E-value=5e-13  Score=92.07  Aligned_cols=116  Identities=17%  Similarity=0.306  Sum_probs=88.8

Q ss_pred             eEEEEEEeCCCCceeE---EEEEec-----CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeCC--CCc
Q psy9139           4 NYTCLADNIFGKDDIY---YQVTIL-----SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRT--EDW   71 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~---~~~~~~-----~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~--~~~   71 (197)
                      .|++.|.|..|....+   ..+...     .+|.+|. +.+...+.+++.|.|.++. +.++.+.+|.|+++...  +.|
T Consensus        84 ~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~  163 (214)
T 2ibg_A           84 RFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEY  163 (214)
T ss_dssp             EEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCC
T ss_pred             EEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcce
Confidence            4677889998864332   222222     1344566 7777788899999999985 56678999999998433  578


Q ss_pred             EEEEeC-CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          72 QSVHVD-AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        72 ~~~~~~-~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      ..+... ...+.++|.+|.|++.|.|+|+|.|..|.+.++..+.++|..
T Consensus       164 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  212 (214)
T 2ibg_A          164 FKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR  212 (214)
T ss_dssp             EEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             EEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence            776654 346789999999999999999999999999999988888754

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-13  Score=87.86  Aligned_cols=95  Identities=22%  Similarity=0.419  Sum_probs=74.4

Q ss_pred             EEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe------------CCCCcEEEEeCCcccEEEEC
Q psy9139          21 QVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD------------RTEDWQSVHVDAEYREFTLT   86 (197)
Q Consensus        21 ~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~------------~~~~~~~~~~~~~~~~~~i~   86 (197)
                      .+.+...|.+|.  +.+...+.+++.|.|.++.+.+  +..|.+.|+.            ....|..+.. ...+.+++.
T Consensus         9 ~l~~~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-~~~~~~~v~   85 (127)
T 2dmk_A            9 GLDYLTAPNPPSIREELCTASHDTITVHWISDDEFS--ISSYELQYTIFTGQANFISLYNSVDSWMIVPN-IKQNHYTVH   85 (127)
T ss_dssp             CCSCCSSCCCCEEEEEEEEEETTEEEEEEECSCCSS--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-ECSSEEEEE
T ss_pred             cccccCCCcCCCCCCEEEeeeCCEEEEEECCCCCCC--ccceEEEEEEecccccccccccCCCCcEEeec-ccCCeEEEC
Confidence            445567899997  5677789999999999987544  6788898873            1245776543 456789999


Q ss_pred             CCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          87 QLKCGTHYKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        87 ~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      +|.|++.|.|+|+|.|..|. .++..+.++|..
T Consensus        86 gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~  117 (127)
T 2dmk_A           86 GLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNS  117 (127)
T ss_dssp             SCCSSCEEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred             CCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence            99999999999999999999 577777777753

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.52  E-value=1.1e-13  Score=100.50  Aligned_cols=116  Identities=20%  Similarity=0.292  Sum_probs=86.4

Q ss_pred             eEEEEEEeCCCCcee-EEEEE--ecCCCCCCE-EEEEee--cCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEe
Q psy9139           4 NYTCLADNIFGKDDI-YYQVT--ILSPPGVPN-ILLQST--TTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHV   76 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~~--~~~~P~~p~-~~~~~~--~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~   76 (197)
                      .|+|.|.|..|.... ...+.  ...+|.+|. +.+...  +.+++.|.|.+|...++++.+|.|+|+. ....|..+..
T Consensus       173 ~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~  252 (303)
T 1i1r_A          173 EVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP  252 (303)
T ss_dssp             EEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG
T ss_pred             EEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEcc
Confidence            356999999997542 22222  225788997 666543  6789999999987555678999999995 3567876543


Q ss_pred             ---CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC---CCceEeecCC
Q psy9139          77 ---DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP---SKTIAASTKG  119 (197)
Q Consensus        77 ---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~---s~~~~~~t~~  119 (197)
                         ....+.++|.+|.|++.|.|+|+|.|..|.+.+   |..+.++|.+
T Consensus       253 ~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e  301 (303)
T 1i1r_A          253 EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE  301 (303)
T ss_dssp             GGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred             ccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence               345678999999999999999999999887655   4556677654

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.52  E-value=2.7e-13  Score=83.31  Aligned_cols=90  Identities=17%  Similarity=0.263  Sum_probs=70.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEe--eeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILW--KPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W--~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|.+|. +++...+.+++.|.|  .+|...++. .+|.|+|+.....+. .....  ..++|.+|.|++.|.|+|+|.|
T Consensus         8 ~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~~~~~-~~~~~--~~~~i~~L~p~t~Y~f~V~A~~   83 (107)
T 1x5a_A            8 AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGN-LSYELHVLNQDEEWH-QMVLE--PRVLLTKLQPDTTYIVRVRTLT   83 (107)
T ss_dssp             CCCCCSCCCCEEEEETTEEEEECCCCCSSCCSSC-CEEEEEEECSSCEEE-EEESS--SEEEEESCCSSCEEEEEEEEEC
T ss_pred             CCCCCCCceEEEecCCCEEEEEECCCCCCCCCCc-eEEEEEEEeCCCCce-EEEec--ceEEECCCCCCCEEEEEEEEEC
Confidence            5677775 888889999999999  888766666 899999985422222 22222  2399999999999999999999


Q ss_pred             CCcCCCCCCceEeecCC
Q psy9139         103 SIGESKPSKTIAASTKG  119 (197)
Q Consensus       103 ~~g~~~~s~~~~~~t~~  119 (197)
                      ..|.+.++..+.+.|..
T Consensus        84 ~~G~g~~S~~~~~~T~~  100 (107)
T 1x5a_A           84 PLGPGPFSPDHEFRTSP  100 (107)
T ss_dssp             SSSCCCCCCCEEEECCC
T ss_pred             CCccCCCCCCEEEEECC
Confidence            99999999988887754

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=8.3e-13  Score=84.34  Aligned_cols=93  Identities=20%  Similarity=0.404  Sum_probs=74.2

Q ss_pred             CCC-CCE-EEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeCCC---CcEEEE-eCCcccEEEECCCCCCCEEEEEE
Q psy9139          27 PPG-VPN-ILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDRTE---DWQSVH-VDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        27 ~P~-~p~-~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~~~---~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .|. +|. +.+...+.+++.|.|.++  .+.++.+.+|.|+|+....   .+..+. +....+.++|.+|.|++.|.|+|
T Consensus        17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   96 (134)
T 2edx_A           17 TPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWV   96 (134)
T ss_dssp             CCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEE
T ss_pred             CCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEE
Confidence            454 786 888888999999999998  5667789999999984322   223222 24667899999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecCC
Q psy9139          99 KLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      +|.|..|.+.++..+.++|..
T Consensus        97 ~A~n~~G~g~~S~~~~~~T~~  117 (134)
T 2edx_A           97 RAHTDVGPGPESSPVLVRTDE  117 (134)
T ss_dssp             EEEETTBCCCCCCCEEEECCC
T ss_pred             EEEcCCCcCCCCCCEEeecCC
Confidence            999999999998888877753

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.6e-13  Score=84.32  Aligned_cols=89  Identities=15%  Similarity=0.197  Sum_probs=71.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .++.+|. +.+...+.+++.|+|.++.   +.|.+|+|+|+..++ .+..+.+....++++|.+|.|++.|.|+|.|.|.
T Consensus         6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~---~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~   82 (108)
T 2ee3_A            6 SGLAPPRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYP   82 (108)
T ss_dssp             CCCCCSSCEEEESCCSSCEEEEESCCS---SCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEECT
T ss_pred             cCCCCCceEEEEEccCCeEEEEeeCCC---CCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEeC
Confidence            4567787 9999999999999999864   568999999985433 4555566677789999999999999999999999


Q ss_pred             CcCCCCCCceEeecC
Q psy9139         104 IGESKPSKTIAASTK  118 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~  118 (197)
                      .|.+.++.. .+.|.
T Consensus        83 ~g~s~p~~~-~~~T~   96 (108)
T 2ee3_A           83 GGGSSTLTG-RVTTK   96 (108)
T ss_dssp             TSCEEEEEE-EEECC
T ss_pred             CCcCCCccC-EEEeC
Confidence            998876543 45553

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.51  E-value=3.1e-13  Score=99.10  Aligned_cols=108  Identities=12%  Similarity=0.190  Sum_probs=81.6

Q ss_pred             eEEEEEEeCCCCcee-EEEE--EecCCCCCCE-EEEEeec--CCeEEEEeeeCCC--CCccccEEEEEEEe-CCCCcEEE
Q psy9139           4 NYTCLADNIFGKDDI-YYQV--TILSPPGVPN-ILLQSTT--THSISILWKPSYD--GGAIITHYIVSYRD-RTEDWQSV   74 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~--~~~~~P~~p~-~~~~~~~--~~~~~l~W~~~~~--~~~~i~~y~v~~~~-~~~~~~~~   74 (197)
                      .|+|.|.|..|.... ...+  ....+|++|. +.+....  .+++.|+|.++..  .+..+..|.|+|+. ....|..+
T Consensus       170 ~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~  249 (325)
T 1n26_A          170 IVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW  249 (325)
T ss_dssp             EEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE
T ss_pred             EEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE
Confidence            467899999996432 2222  2235789997 7666654  3699999999864  44567899999984 45679877


Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      .+....+.++|.+|.|++.|.|+|+|.|..|.|.+|.
T Consensus       250 ~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~  286 (325)
T 1n26_A          250 MVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE  286 (325)
T ss_dssp             ECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred             cccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcC
Confidence            6655667899999999999999999999888765543

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.51  E-value=1.2e-13  Score=86.02  Aligned_cols=91  Identities=22%  Similarity=0.345  Sum_probs=73.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|.|.++.++  .+.+|.|+|+. ....|.... ....+.++|.+|.|++.|.|+|+|.|.
T Consensus        16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~--~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~   92 (115)
T 1x5z_A           16 GVPGQPLNFKAEPESETSILLSWTPPRSD--TIANYELVYKDGEHGEEQRIT-IEPGTSYRLQGLKPNSLYYFRLAARSP   92 (115)
T ss_dssp             CCCCCCEEEEEECSSSSEEEEEEECCSCC--CCCEEEECBEESSSCCCBCCE-ECSSSEEEEECCCTTCEEEECEEEECS
T ss_pred             CCCCCCccCEeeeCCCCEEEEEEcCCCCC--CccEEEEEEEeCCCCCceEEe-cCCCcEEEECCCCCCCeEEEEEEEECC
Confidence            4677786 888888999999999998753  78999999984 333443323 234588999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.+.++..+.++|..
T Consensus        93 ~G~g~~S~~~~~~T~~  108 (115)
T 1x5z_A           93 QGLGASTAEISARTMQ  108 (115)
T ss_dssp             SCEEEECCCEEEECCC
T ss_pred             CcccCCCcCEEEecCC
Confidence            9999998888887754

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=5e-13  Score=84.34  Aligned_cols=91  Identities=11%  Similarity=0.127  Sum_probs=72.5

Q ss_pred             CCCCE-EEEE-eecCCeEEEEeeeC--CCCCccccEEEEEEE-eCC---CCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          28 PGVPN-ILLQ-STTTHSISILWKPS--YDGGAIITHYIVSYR-DRT---EDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        28 P~~p~-~~~~-~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~-~~~---~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      +.+|. +.+. ..+.+++.|.|.++  ...++.|.+|+|+|+ ...   ..|... +....+.++|.+|.|++.|.|+|+
T Consensus        19 ~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~   97 (124)
T 2dbj_A           19 SVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEE-VGQNGSRARISVQVHNATCTVRIA   97 (124)
T ss_dssp             CSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEE-EESTTSCEEEECCCSSSEEEECEE
T ss_pred             CCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEE-eCCCcceEEecCCCCCCEEEEEEE
Confidence            34776 7776 57789999999998  566778999999996 222   234322 345567899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecCC
Q psy9139         100 LVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |.|..|.+.++..+.+.|..
T Consensus        98 A~n~~G~Gp~S~~~~~~T~~  117 (124)
T 2dbj_A           98 AVTRGGVGPFSDPVKIFIPA  117 (124)
T ss_dssp             EEESSCBCCCCCCEEEECCC
T ss_pred             EECCCccCCCCCCEEEEcCC
Confidence            99999999999988888754

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.50  E-value=1.5e-12  Score=89.15  Aligned_cols=103  Identities=19%  Similarity=0.301  Sum_probs=80.4

Q ss_pred             EEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCccc
Q psy9139           5 YTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYR   81 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~   81 (197)
                      |++.|.|..|.+..........+| +|. +.+...+.+++.|.|.++.  ++.+.+|.|.|+..  ...+....+....+
T Consensus        92 ~~V~a~~~~g~s~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~  168 (203)
T 2gee_A           92 ISVYTVKNGGESTPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSDN  168 (203)
T ss_dssp             EEEEEESSSCBCCCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS--SCCCSEEEEEEEETTCGGGCEEEEECTTCC
T ss_pred             EEEEEEeCCCccccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC--CCCccEEEEEEEECCCCCccEEEEcCCCcC
Confidence            566778887765444333334455 666 8888899999999999986  34789999999853  23466666777889


Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      .++|.+|.|++.|.|+|+|.+..|.+.+.
T Consensus       169 ~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~  197 (203)
T 2gee_A          169 AVVLTNLLPGTEYVVSVSSVYEQHESTPL  197 (203)
T ss_dssp             EEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             EEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence            99999999999999999999999988764

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=99.50  E-value=5.2e-13  Score=81.20  Aligned_cols=79  Identities=19%  Similarity=0.287  Sum_probs=66.2

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .|.+|. +.+...+.+++.|.|.++.. ++.+.+|.|.|....+  .+....+....+.++|.+|.|++.|.|+|.|.+.
T Consensus         4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~~-~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~   82 (101)
T 3k2m_C            4 VSSVPTKLEVVAATPTSLLISWDAPMS-SSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGE   82 (101)
T ss_dssp             EEBSSCEEEEEEEETTEEEEEECCCCT-TSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCCcceEEeecCCCEEEEEecCCCC-CCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            356776 88889999999999999763 4678999999985332  4566666777889999999999999999999999


Q ss_pred             CcC
Q psy9139         104 IGE  106 (197)
Q Consensus       104 ~g~  106 (197)
                      .|.
T Consensus        83 ~~~   85 (101)
T 3k2m_C           83 DSA   85 (101)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            887

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=99.50  E-value=1.1e-12  Score=79.22  Aligned_cols=80  Identities=25%  Similarity=0.419  Sum_probs=67.9

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +.+|. +.+...+.+++.|.|.++.   +.+.+|.|+|+.  ..+.|....+....+.++|.+|.|++.|.|+|.|.|..
T Consensus         2 ~~~P~~l~v~~~~~~sv~l~W~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   78 (98)
T 3teu_A            2 LDAPTDLQVTNVTDTSITVSWTPPS---ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDN   78 (98)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCceEEEEecCCEEEEEEeCCC---CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeCC
Confidence            56776 8888899999999999873   678999999983  33556777777788899999999999999999999999


Q ss_pred             cCCCCC
Q psy9139         105 GESKPS  110 (197)
Q Consensus       105 g~~~~s  110 (197)
                      |.+.+.
T Consensus        79 G~s~p~   84 (98)
T 3teu_A           79 QESPPL   84 (98)
T ss_dssp             EECCCE
T ss_pred             CCCCCe
Confidence            988764

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=2e-13  Score=85.72  Aligned_cols=93  Identities=22%  Similarity=0.362  Sum_probs=74.4

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC----CCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT----EDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+|.+|. +.+...+.+++.|.|.++.+.++.|.+|.|+|+...    ..|.... ....+.++|.+|.|++.|.|+|+|
T Consensus        17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A   95 (121)
T 2dlh_A           17 APSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHN-VADSQITTIGNLVPQKTYSVKVLA   95 (121)
T ss_dssp             CCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCC-CSSCSEECCBSCCSSCEEEEEEEE
T ss_pred             CCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEe-cCCceEEEecCCCCCCEEEEEEEE
Confidence            3456786 888888999999999999777778999999998321    2333222 345678999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++..+.+.|..
T Consensus        96 ~n~~G~g~~S~~~~~~T~~  114 (121)
T 2dlh_A           96 FTSIGDGPLSSDIQVITQT  114 (121)
T ss_dssp             EESSCBCCCCCCEEEECCC
T ss_pred             EeCCccCCCCCCEEEECCC
Confidence            9999999999888887753

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.49  E-value=3.3e-13  Score=103.63  Aligned_cols=169  Identities=14%  Similarity=0.124  Sum_probs=105.8

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCC---ccccEEEEEEEeCCCC--cEEEE
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGG---AIITHYIVSYRDRTED--WQSVH   75 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~---~~i~~y~v~~~~~~~~--~~~~~   75 (197)
                      .|.|+|.+.+  +.....+.+.+..+|++|. +.+......++.+.|.++.+.+   .++..|.|.++.....  |....
T Consensus       263 ~g~y~~~C~~--~~~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~  340 (488)
T 2q7n_A          263 NSGTNIIFIT--DDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIE  340 (488)
T ss_dssp             SSCEEEEEEE--SSCEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSS
T ss_pred             CCcEEEEEEc--CCeEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCcccc
Confidence            5677777663  3334467888889999998 8888778899999999987553   3578999998633221  21111


Q ss_pred             eC-CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec-----CCCC-------------CCCeeecCCC-----
Q psy9139          76 VD-AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-----KGED-------------QTDWINIPLS-----  131 (197)
Q Consensus        76 ~~-~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t-----~~~~-------------~~~w~~~~~~-----  131 (197)
                      .. .....+.+..+...+.|.|+|.|.|..|.+. + ...+.+     +.+|             ...|......     
T Consensus       341 ~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l  418 (488)
T 2q7n_A          341 GLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINL  418 (488)
T ss_dssp             CCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E-EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEE
T ss_pred             ccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcce
Confidence            11 3345677755554699999999999998732 2 222211     1111             1223221100     


Q ss_pred             -----------CCc----c---cccceE--EEcCCCCCCeEEEEEEEEcCCCCC---CcceEEEEee
Q psy9139         132 -----------NLD----E---ALEMPL--VIENLLPATRYELTISAKNDAGST---NKNYVFATLS  175 (197)
Q Consensus       132 -----------~~~----~---~~~~~~--~i~~L~p~t~Y~v~V~a~n~~G~~---~~~~~~~t~~  175 (197)
                                 ...    .   .....+  .+.+|+|++.|.|+|+|.+ .|.|   +.+..+...|
T Consensus       419 ~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T  484 (488)
T 2q7n_A          419 LCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLT  484 (488)
T ss_dssp             EEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCC
T ss_pred             EEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEEC
Confidence                       000    0   002356  9999999999999999999 7774   5555443443

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=99.48  E-value=3.5e-13  Score=97.06  Aligned_cols=114  Identities=19%  Similarity=0.269  Sum_probs=87.5

Q ss_pred             eEEEEEEeCCCCcee-EEEEEe-cCCC-CCCEEEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeCCCCcEEEEeCC
Q psy9139           4 NYTCLADNIFGKDDI-YYQVTI-LSPP-GVPNILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDRTEDWQSVHVDA   78 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~~~-~~~P-~~p~~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~~~~~~~~~~~~   78 (197)
                      .|++.|.|..|.... .+.... ...| .+|.+.+...+.+++.|.|.++  .+.++.+.+|.|.++...+.|....+..
T Consensus       171 ~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~  250 (290)
T 3l5i_A          171 LITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDS  250 (290)
T ss_dssp             EEEEEEEETTEECCCEEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCCEEEEEET
T ss_pred             EEEEEEEeCCcccccEEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCeEEEEeCC
Confidence            456778899885442 222221 2234 4556777888999999999953  3556789999999997666777666777


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      ..+.++|.+|.|++.|.|+|.|.|..| +..+..+.++|.
T Consensus       251 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~  289 (290)
T 3l5i_A          251 SHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP  289 (290)
T ss_dssp             TCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECC
T ss_pred             CceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecC
Confidence            888999999999999999999999999 777777888774

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.48  E-value=1.7e-13  Score=85.83  Aligned_cols=88  Identities=19%  Similarity=0.331  Sum_probs=72.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|.+|. +.+...+.+++.|.|.++.+.++.|.+|.|+|+...  ..+....+....+.++|.+|.|++.|.|+|+|.|
T Consensus        16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   95 (119)
T 1wfn_A           16 DVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMT   95 (119)
T ss_dssp             CSCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEEC
T ss_pred             CCCCCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEc
Confidence            4677775 888888999999999998877778999999998432  2223344567788999999999999999999999


Q ss_pred             CCcCCCCCCce
Q psy9139         103 SIGESKPSKTI  113 (197)
Q Consensus       103 ~~g~~~~s~~~  113 (197)
                      ..|.+.++...
T Consensus        96 ~~G~g~~S~~~  106 (119)
T 1wfn_A           96 SKGQGQVSAST  106 (119)
T ss_dssp             SSCEEEEEEEE
T ss_pred             CCccCCCCCCE
Confidence            99998877655

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.47  E-value=5.2e-13  Score=104.74  Aligned_cols=87  Identities=26%  Similarity=0.585  Sum_probs=75.2

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEE-eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..+|+||. +.+...+.+++.|+|.+|. ||+++|++|.|+++ .....|..+.. ...+.+++.+|.++..|.|||+|.
T Consensus         7 ~~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~-~~~t~~~V~~L~~g~~Y~FRV~A~   85 (573)
T 3uto_A            7 VPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK-SRYTYTTIEGLRAGKQYEFRIIAE   85 (573)
T ss_dssp             -CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEE-ESSSEEEECCCCTTCEEEEEEEEE
T ss_pred             CCCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecc-ccCCEEEeCCCCCCCcEeEEEEEE
Confidence            45688997 8899999999999999985 88889999999998 46678987763 346789999999999999999999


Q ss_pred             cCCcCCCCCCc
Q psy9139         102 NSIGESKPSKT  112 (197)
Q Consensus       102 ~~~g~~~~s~~  112 (197)
                      |..|.|.++..
T Consensus        86 N~~G~s~PS~~   96 (573)
T 3uto_A           86 NKHGQSKPCEP   96 (573)
T ss_dssp             ETTEECCCCCC
T ss_pred             cCceEcCCcCC
Confidence            99999987754

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.47  E-value=1.2e-13  Score=113.61  Aligned_cols=86  Identities=22%  Similarity=0.356  Sum_probs=65.8

Q ss_pred             EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeC---------------CCCcEEEEeCC----------cccEEEEC
Q psy9139          33 ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDR---------------TEDWQSVHVDA----------EYREFTLT   86 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~---------------~~~~~~~~~~~----------~~~~~~i~   86 (197)
                      +.+...+++++.|+|.++. ++++++.+|.|+|+..               ...|....+..          ....+++.
T Consensus       475 l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~  554 (897)
T 2dtg_E          475 FSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMR  554 (897)
T ss_dssp             CSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEEC
T ss_pred             EEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeC
Confidence            6788889999999999986 3456899999998732               23565433221          25789999


Q ss_pred             CCCCCCEEEEEEEE-EcCCcC----CCCCCceEeecC
Q psy9139          87 QLKCGTHYKINIKL-VNSIGE----SKPSKTIAASTK  118 (197)
Q Consensus        87 ~L~p~~~y~~~v~a-~~~~g~----~~~s~~~~~~t~  118 (197)
                      +|.|++.|.|+|.| .|..|.    +.++..+.++|.
T Consensus       555 ~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~  591 (897)
T 2dtg_E          555 GLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD  591 (897)
T ss_dssp             SCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred             CCCCCcEEEEEEEEEEeccCCccccCCccceEEEECC
Confidence            99999999999999 898887    566666666664

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.46  E-value=5e-13  Score=85.22  Aligned_cols=93  Identities=23%  Similarity=0.356  Sum_probs=75.1

Q ss_pred             CCC-CCE-EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEeCCC-CcEE-EEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          27 PPG-VPN-ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRTE-DWQS-VHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        27 ~P~-~p~-~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~~~~-~~~~-~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .|. +|. +.+...+.+++.|.|.++..  .++.+.+|.|+|+.... .|.. ..+....+.++|.+|.|++.|.|+|+|
T Consensus        17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   96 (132)
T 1x5h_A           17 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAA   96 (132)
T ss_dssp             SCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCEEEEECEE
T ss_pred             CCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCCCCCEEEEEEEE
Confidence            444 776 88888899999999999875  67789999999985332 2222 124567789999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.+.++..+.++|..
T Consensus        97 ~n~~G~g~~S~~~~~~T~~  115 (132)
T 1x5h_A           97 LTINGTGPATDWLSAETFE  115 (132)
T ss_dssp             EETTEEEEECCCEEEECCS
T ss_pred             EcCCccCCCCcCEEeEcCc
Confidence            9999999998888888754

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.46  E-value=2e-12  Score=87.71  Aligned_cols=108  Identities=27%  Similarity=0.416  Sum_probs=83.3

Q ss_pred             eEEEEEEeCCCCceeEE---EEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCC-ccccEEEEEEEe-CCCCcEEEEeC
Q psy9139           4 NYTCLADNIFGKDDIYY---QVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGG-AIITHYIVSYRD-RTEDWQSVHVD   77 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~---~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~-~~i~~y~v~~~~-~~~~~~~~~~~   77 (197)
                      .|++.|.|..|....+.   ......+|.+|. +.+...+.+++.|.|.++...+ ..+.+|.|+++. ....|.... .
T Consensus        76 ~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~  154 (197)
T 3lpw_A           76 YFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-T  154 (197)
T ss_dssp             EEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-E
T ss_pred             EEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-c
Confidence            46778889988644332   334456788886 8888889999999999876433 478999999984 445566544 3


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~  112 (197)
                      ...+.+++.+|.|++.|.|+|+|.|..|.+.++..
T Consensus       155 ~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~  189 (197)
T 3lpw_A          155 VKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQL  189 (197)
T ss_dssp             ESSSEEEECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred             ccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence            45678999999999999999999999999887654

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=99.46  E-value=6.4e-13  Score=80.16  Aligned_cols=80  Identities=21%  Similarity=0.300  Sum_probs=65.7

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .+.+|. +.+...+.+++.|.|.++.   +.+.+|.|.|+...+.  +....+....+.++|.+|.|++.|.|+|.|.+.
T Consensus         4 ~~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~   80 (97)
T 3qht_C            4 VSSVPTKLEVVAATPTSLLISWDASS---SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYS   80 (97)
T ss_dssp             -CCSSSSCEEEEEETTEEEEECCCCC---SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCCCceEEEecCCCEEEEEEeCCC---CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence            567776 8888899999999999864   4789999999853332  455566777889999999999999999999999


Q ss_pred             CcCCCC
Q psy9139         104 IGESKP  109 (197)
Q Consensus       104 ~g~~~~  109 (197)
                      .|.+..
T Consensus        81 ~G~gp~   86 (97)
T 3qht_C           81 YYDLYY   86 (97)
T ss_dssp             ETTEEE
T ss_pred             CccCCC
Confidence            998754

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.46  E-value=2.5e-13  Score=98.83  Aligned_cols=149  Identities=13%  Similarity=0.113  Sum_probs=88.2

Q ss_pred             EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEEC--CCCCCCEEEEEEEEEcCCcC
Q psy9139          32 NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTLT--QLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        32 ~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i~--~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ++.+... ...+.|.|+++.++++++. |.|+|+. ....|....  .....+.+.+.  .|.+++.|.++|+|.| .|.
T Consensus         9 nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A~n-~~~   85 (306)
T 3s98_A            9 KVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENT   85 (306)
T ss_dssp             CCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEEEC-SSC
T ss_pred             EeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEEEe-CCc
Confidence            3655544 5567899999887666776 9999995 456787542  12334556664  4689999999999999 776


Q ss_pred             CCCCCceEeec-----CCCC-----------CCCeeecCCC---------C-----------Cc-----ccccceEEEcC
Q psy9139         107 SKPSKTIAAST-----KGED-----------QTDWINIPLS---------N-----------LD-----EALEMPLVIEN  145 (197)
Q Consensus       107 ~~~s~~~~~~t-----~~~~-----------~~~w~~~~~~---------~-----------~~-----~~~~~~~~i~~  145 (197)
                      +.++....+.+     ..+|           .+.|......         .           ..     ......++|.+
T Consensus        86 S~~s~~~~f~~~~~~~~~pP~v~~~~~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~~~~~~~l~~  165 (306)
T 3s98_A           86 SSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYK  165 (306)
T ss_dssp             EEEEECCCBCHHHHCBCCCCEEEEEECSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEEEEEECTEEEECS
T ss_pred             CCCEeeeeEechhhCccCCCeEEEEEcCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEEEecccceEEEcc
Confidence            65543322221     1122           2344411110         0           00     01245689999


Q ss_pred             CCCCCeEEEEEEEEc--CCCCCCcceEEEEeeeCCCcCCC
Q psy9139         146 LLPATRYELTISAKN--DAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       146 L~p~t~Y~v~V~a~n--~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                      |+|++.|.|+|+|.|  ..|.|+.+......+..+.+.+|
T Consensus       166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~  205 (306)
T 3s98_A          166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPP  205 (306)
T ss_dssp             CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCC
T ss_pred             CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCC
Confidence            999999999999999  67888876666566655544333

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.45  E-value=4.8e-13  Score=93.55  Aligned_cols=116  Identities=18%  Similarity=0.247  Sum_probs=84.7

Q ss_pred             eEEEEEEeCCCCceeEEEEEe---cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-C-----CCcEE
Q psy9139           4 NYTCLADNIFGKDDIYYQVTI---LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-T-----EDWQS   73 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~---~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~-----~~~~~   73 (197)
                      .|++.|.|..|....+..+.+   ...|.+|. +.+...+.+++.|.|.++.+.++.+.+|.|+|+.. .     +.|..
T Consensus        72 ~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~  151 (234)
T 3f7q_A           72 EMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKK  151 (234)
T ss_dssp             EEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEE
T ss_pred             EEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceE
Confidence            355677898886543333333   24566665 88888899999999999877677899999999832 1     12333


Q ss_pred             EEe-CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc-eEeecCC
Q psy9139          74 VHV-DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT-IAASTKG  119 (197)
Q Consensus        74 ~~~-~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~-~~~~t~~  119 (197)
                      ... ....+.++|.+|.|++.|.|+|+|.|..|.+.++.. +.+.|.+
T Consensus       152 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~  199 (234)
T 3f7q_A          152 VLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQP  199 (234)
T ss_dssp             CCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSC
T ss_pred             EEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCC
Confidence            333 344578999999999999999999999999988763 5566643

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.45  E-value=4.1e-12  Score=85.65  Aligned_cols=110  Identities=25%  Similarity=0.284  Sum_probs=83.6

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCccc
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYR   81 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~   81 (197)
                      .|++.|.|..|.+ ....+.+...|.+|. +.+...+.+++.|.|.++.   +.+.+|.|+|+.. .+.+....+....+
T Consensus        72 ~~~V~a~~~~~~s-~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~  147 (186)
T 1qr4_A           72 TISLVAEKGRHKS-KPTTIKGSTVVGSPKGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTPNVVTVDGSKT  147 (186)
T ss_dssp             EEEEEEESSSCBC-CCEEEEEECCCCCCSCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCCCCEEEEEETTCC
T ss_pred             EEEEEEEcCCccC-CCEEEEEECCCCCCCccEEEEeCCCEEEEEEECCC---CcccEEEEEEEeCCCCCceEEEcCCCcC
Confidence            3566777865533 345566667788886 8888889999999999875   4589999999853 34556666677788


Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      .++|.+|.|++.|.|+|.|.+..|.+.+. ...+.|.
T Consensus       148 ~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~  183 (186)
T 1qr4_A          148 RTKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTA  183 (186)
T ss_dssp             EEEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC-
T ss_pred             EEEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEec
Confidence            99999999999999999999999887663 3444443

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=99.45  E-value=2.1e-12  Score=78.05  Aligned_cols=80  Identities=25%  Similarity=0.448  Sum_probs=66.4

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      |.|..+.+...+.+++.|+|.++.   +++.+|.|+|+...  +.+....+....+.++|.+|.|++.|.|+|.|.+..|
T Consensus         3 p~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g   79 (98)
T 3tes_A            3 PAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGH   79 (98)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence            334448888999999999999875   36889999998543  5566666777888999999999999999999999998


Q ss_pred             CCCCC
Q psy9139         106 ESKPS  110 (197)
Q Consensus       106 ~~~~s  110 (197)
                      .+.+.
T Consensus        80 ~S~p~   84 (98)
T 3tes_A           80 RSNPL   84 (98)
T ss_dssp             EBCCE
T ss_pred             ccCCE
Confidence            88764

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.44  E-value=2.4e-12  Score=88.79  Aligned_cols=115  Identities=16%  Similarity=0.217  Sum_probs=82.2

Q ss_pred             EEEEEEeCCCCcee-EEEEEe--cCCCCCCE-EEEEee------cCCeEEEEeeeCCCCCccccEEEEEEE-e-CCCCcE
Q psy9139           5 YTCLADNIFGKDDI-YYQVTI--LSPPGVPN-ILLQST------TTHSISILWKPSYDGGAIITHYIVSYR-D-RTEDWQ   72 (197)
Q Consensus         5 y~c~a~n~~G~~~~-~~~~~~--~~~P~~p~-~~~~~~------~~~~~~l~W~~~~~~~~~i~~y~v~~~-~-~~~~~~   72 (197)
                      +++.|.|..|.... ...+..  ..+|.+|. +.+...      ..+++.|.|.+|...+..+..|.|+|+ . ....|.
T Consensus        83 ~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~  162 (215)
T 1cd9_B           83 IWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWT  162 (215)
T ss_dssp             EEEEEEETTEEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCE
T ss_pred             EEEEEECCCCCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcE
Confidence            55788999996432 222222  24789997 665554      578899999998643333479999998 4 556787


Q ss_pred             EEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEeecCC
Q psy9139          73 SVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAASTKG  119 (197)
Q Consensus        73 ~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~~t~~  119 (197)
                      .+. .....+.+.|.+|.|++.|.|+|+|.+..|.   +.+|..+.++|..
T Consensus       163 ~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e  213 (215)
T 1cd9_B          163 LVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM  213 (215)
T ss_dssp             EEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred             EEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence            643 2345678999999999999999999998665   4567777777754

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.43  E-value=3.5e-12  Score=79.35  Aligned_cols=89  Identities=17%  Similarity=0.239  Sum_probs=71.4

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ..|.+|. +.+...+.+++.|.|.++.   ..+.+|+|.|....+......+....+.++|.+|.|++.|.|+|.|.+..
T Consensus         6 t~p~~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~   82 (115)
T 2cuh_A            6 SGPDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGP   82 (115)
T ss_dssp             CCCSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETT
T ss_pred             cCCCCCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCC
Confidence            4678887 8888899999999999875   35789999998544445555667778899999999999999999999988


Q ss_pred             cCCCCCCceEeecC
Q psy9139         105 GESKPSKTIAASTK  118 (197)
Q Consensus       105 g~~~~s~~~~~~t~  118 (197)
                      |.+.+. ...+.|.
T Consensus        83 ~~s~~~-~~~~~T~   95 (115)
T 2cuh_A           83 NLTSPA-SITFTTG   95 (115)
T ss_dssp             EECCCE-EEEEESC
T ss_pred             CcCCCE-EEEEEeC
Confidence            876654 3455554

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=99.42  E-value=1.4e-12  Score=81.86  Aligned_cols=85  Identities=21%  Similarity=0.287  Sum_probs=66.1

Q ss_pred             EecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-C-cEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          23 TILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-D-WQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        23 ~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~-~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      ....+|.+|. +.+...+.+++.|.|.++.   ..+.+|+|.|+...+ . +....+....+.++|.+|.|++.|.|+|.
T Consensus        24 ~~~tp~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~  100 (121)
T 2ocf_D           24 FQGSVSDVPTKLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVY  100 (121)
T ss_dssp             -----CCSCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEE
T ss_pred             eccCCCCCCCccEEEecCCCEEEEEEcCCC---CCCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEE
Confidence            4445778887 9999999999999999875   248899999985433 2 44455667788999999999999999999


Q ss_pred             EEcCCcCCCCC
Q psy9139         100 LVNSIGESKPS  110 (197)
Q Consensus       100 a~~~~g~~~~s  110 (197)
                      |.+..|.+.++
T Consensus       101 A~~~~G~g~~S  111 (121)
T 2ocf_D          101 AVTGLRLMLAG  111 (121)
T ss_dssp             EECCHHHHHHS
T ss_pred             EEeCCCccCCC
Confidence            99999986543

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=99.42  E-value=3.1e-12  Score=79.42  Aligned_cols=77  Identities=22%  Similarity=0.342  Sum_probs=62.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--cEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|++|. +.+...+.+++.|+|.++.   +.+.+|.|.|+...+.  .....+....+.++|.+|.|++.|.|+|+|.+
T Consensus         2 GvP~~P~~L~v~~~t~~Sv~lsW~~p~---g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~   78 (114)
T 3qwq_B            2 GVSDVPRDLEVVAATPTSLLISWDSGR---GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVT   78 (114)
T ss_dssp             ---CCCEEEEEEEEETTEEEEEEECCS---CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCCCceEEEecCCCEEEEEEcCCc---CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEE
Confidence            4688897 8999999999999999864   5689999999854332  34555677788999999999999999999999


Q ss_pred             CCc
Q psy9139         103 SIG  105 (197)
Q Consensus       103 ~~g  105 (197)
                      ..|
T Consensus        79 ~~G   81 (114)
T 3qwq_B           79 DHK   81 (114)
T ss_dssp             EEE
T ss_pred             CCc
Confidence            998

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.42  E-value=2.3e-12  Score=93.89  Aligned_cols=115  Identities=16%  Similarity=0.181  Sum_probs=82.1

Q ss_pred             EEEEEEeCCCCcee-EEEEEe--cCCCCCCE-EEEEee------cCCeEEEEeeeCCCCCccccEEEEEEE-e-CCCCcE
Q psy9139           5 YTCLADNIFGKDDI-YYQVTI--LSPPGVPN-ILLQST------TTHSISILWKPSYDGGAIITHYIVSYR-D-RTEDWQ   72 (197)
Q Consensus         5 y~c~a~n~~G~~~~-~~~~~~--~~~P~~p~-~~~~~~------~~~~~~l~W~~~~~~~~~i~~y~v~~~-~-~~~~~~   72 (197)
                      ++|.|.|..|.... ...+..  ..+|.+|. +.+...      ..+++.|.|.+|...+..+..|.|+|+ . ....|.
T Consensus       177 f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~  256 (313)
T 2d9q_B          177 IWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWA  256 (313)
T ss_dssp             EEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCE
T ss_pred             EEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcE
Confidence            45889999997432 222222  24689997 655544      468999999998643333579999998 4 456788


Q ss_pred             EEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC---CCCceEeecCC
Q psy9139          73 SVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGESK---PSKTIAASTKG  119 (197)
Q Consensus        73 ~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~---~s~~~~~~t~~  119 (197)
                      .+. .......+.|.+|.|++.|.|+|+|.|..|.+.   +|..+.+.|..
T Consensus       257 ~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~  307 (313)
T 2d9q_B          257 LVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE  307 (313)
T ss_dssp             EEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred             EcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence            654 344567899999999999999999999877664   56666666643

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=99.42  E-value=2.2e-11  Score=83.21  Aligned_cols=147  Identities=13%  Similarity=0.087  Sum_probs=96.1

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      |.|.++.+..... ...|.|+++.+.++.+. |.|+|+.. +.|.........+.+.|.+|.++..|.++|+|.+..|.+
T Consensus         3 p~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~-Y~V~y~~~-~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~~~S   79 (201)
T 3lqm_A            3 PPPENVRMNSVNF-KNILQWESPAFAKGQLT-FTAQYLSY-RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFADEHS   79 (201)
T ss_dssp             CCCEEEEEEEETT-EEEEEEECCCCSSSCCE-EEEEEEET-TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETTEEC
T ss_pred             CCCcccEEEEECC-ceEEEECCCCCCCCCeE-EEEEEEEC-CCcccCcCccCCCEEECCCCccCCCEEEEEEEecCCCcC
Confidence            4444466665544 56799999886555654 99999854 568765555567889999999999999999999988877


Q ss_pred             CCCCceEee----c-CCCC-----------CCCeeecC---------------------------CCCC--cccccceEE
Q psy9139         108 KPSKTIAAS----T-KGED-----------QTDWINIP---------------------------LSNL--DEALEMPLV  142 (197)
Q Consensus       108 ~~s~~~~~~----t-~~~~-----------~~~w~~~~---------------------------~~~~--~~~~~~~~~  142 (197)
                      .++.. .+.    + ..+|           .+.|....                           ....  .......++
T Consensus        80 ~~s~~-~f~~~~~t~~~PP~v~~~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~  158 (201)
T 3lqm_A           80 DWVQI-TFSPVDDTIIGPPGMQVEVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITPQYDFEV  158 (201)
T ss_dssp             CCEEE-EECHHHHSBCCCCEEEEEEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEECCSSSEEE
T ss_pred             cceee-eeeecccCeeCCCEEEEEEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEEecCceEE
Confidence            66532 221    1 1122           12221110                           0000  001245689


Q ss_pred             EcCCCCCCeEEEEEEEEcC--CCCCCcceEEEEeeeCC
Q psy9139         143 IENLLPATRYELTISAKND--AGSTNKNYVFATLSVNG  178 (197)
Q Consensus       143 i~~L~p~t~Y~v~V~a~n~--~G~~~~~~~~~t~~~~~  178 (197)
                      |.+|+|++.|.|+|+|.+.  .|.|..+...-..+..+
T Consensus       159 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~  196 (201)
T 3lqm_A          159 LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD  196 (201)
T ss_dssp             ECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred             EecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence            9999999999999999986  57777655554454443

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.41  E-value=1.2e-11  Score=84.95  Aligned_cols=115  Identities=17%  Similarity=0.245  Sum_probs=83.4

Q ss_pred             eEEEEEEeCCCCcee-EEEEEe--cCCCCCCE-EEEEeec----CCeEEEEeeeCCCCC---c-cccEEEEEEEe-CCCC
Q psy9139           4 NYTCLADNIFGKDDI-YYQVTI--LSPPGVPN-ILLQSTT----THSISILWKPSYDGG---A-IITHYIVSYRD-RTED   70 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~~~--~~~P~~p~-~~~~~~~----~~~~~l~W~~~~~~~---~-~i~~y~v~~~~-~~~~   70 (197)
                      .+++.|.|..|.... ...+..  ..+|.+|. +.+....    .+++.|.|.+|....   + .+..|.|+|+. ....
T Consensus        76 ~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~  155 (210)
T 3n06_B           76 IMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE  155 (210)
T ss_dssp             EEEEEEEETTEEEECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSS
T ss_pred             EEEEEEEcCCCCeeCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCC
Confidence            356678899996432 222222  25689997 6665443    589999999986332   2 35889999984 3456


Q ss_pred             cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC-CCCCCceEeecCC
Q psy9139          71 WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAASTKG  119 (197)
Q Consensus        71 ~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~-~~~s~~~~~~t~~  119 (197)
                      |.... ....+.+.|.+|.|++.|.|+|+|.+..|. +.+|..+.++|+.
T Consensus       156 ~~~~~-~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~  204 (210)
T 3n06_B          156 WEIHF-AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS  204 (210)
T ss_dssp             CEEEE-EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred             CEEEe-ccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence            76543 344578999999999999999999998886 8899888888854

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.1e-13  Score=84.87  Aligned_cols=84  Identities=25%  Similarity=0.451  Sum_probs=69.2

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|.+|. +.+...+.+++.|.|.++.   +.+.+|+|+|+...  ..|....+....+.++|.+|.|++.|.|+|.|.+
T Consensus         6 ~~p~~P~~l~v~~~t~~si~lsW~~p~---g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~   82 (105)
T 2ekj_A            6 SGRSPPSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIY   82 (105)
T ss_dssp             TTCCCCEEEEEEEEETTEEEEEEECCS---SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBC
T ss_pred             cCCCCCCceEEEeCCCCEEEEEEeCCC---CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            5688887 9999999999999999983   56889999987432  2344445567788999999999999999999999


Q ss_pred             CCcCCCCCCc
Q psy9139         103 SIGESKPSKT  112 (197)
Q Consensus       103 ~~g~~~~s~~  112 (197)
                      ..|.+.++..
T Consensus        83 ~~g~g~~s~~   92 (105)
T 2ekj_A           83 AAGRSEAVSA   92 (105)
T ss_dssp             SSCBCCCBCC
T ss_pred             CCccCCcccc
Confidence            9999887654

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.39  E-value=9.9e-12  Score=77.69  Aligned_cols=83  Identities=22%  Similarity=0.344  Sum_probs=67.8

Q ss_pred             EeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcEEEEe-CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          36 QSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQSVHV-DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        36 ~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+++++.|.|.++ ..++.+.+|.|.|+...     ..|....+ ......++|.+|+|++.|.|+|.|.|..|.|.+
T Consensus        25 ~a~sstsi~vsW~~~-~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~  103 (120)
T 1ujt_A           25 VVLTPTTVQVTWTVD-RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMD  103 (120)
T ss_dssp             CCCBTTEEEEEEEES-SCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCC
T ss_pred             EEccCceEEEEEccC-CCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCCC
Confidence            446789999999974 34567999999998432     46765554 345678999999999999999999999999999


Q ss_pred             CCceEeecCC
Q psy9139         110 SKTIAASTKG  119 (197)
Q Consensus       110 s~~~~~~t~~  119 (197)
                      |..+.++|..
T Consensus       104 S~~v~~~T~e  113 (120)
T 1ujt_A          104 SESKTVRTTE  113 (120)
T ss_dssp             CCCEEEEECS
T ss_pred             CCCEEEECCC
Confidence            9988888864

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=99.39  E-value=9.7e-12  Score=83.29  Aligned_cols=87  Identities=14%  Similarity=0.228  Sum_probs=72.5

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .|.||. +++..++.+++.|+|++|.+..+ |.+|+|.+..    -....++.+.++|++.+|.++|.|.|+|.|.+..|
T Consensus       150 ~p~Pp~NL~At~VT~tSVtLsW~aP~~~~G-I~gY~ly~~g----~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G  224 (238)
T 2w1n_A          150 VVNPVRDFKASEINKKNVTVTWTEPETTEG-LEGYILYKDG----KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNG  224 (238)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCSCCTT-EEEEEEEETT----EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTS
T ss_pred             ccCCCCceEEEEccCCeEEEEecCCCCCCC-ceeEEEEeCC----ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCC
Confidence            578887 99999999999999999987665 8999999842    12234667778999999999999999999999999


Q ss_pred             CCCCCCceEeecC
Q psy9139         106 ESKPSKTIAASTK  118 (197)
Q Consensus       106 ~~~~s~~~~~~t~  118 (197)
                      .......+.++|.
T Consensus       225 ~~Ss~e~vtVrTl  237 (238)
T 2w1n_A          225 EVSSKESLTLRTA  237 (238)
T ss_dssp             CBCCCEEEEEECC
T ss_pred             CccccCcEEEEec
Confidence            8777677777764

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.38  E-value=1.5e-12  Score=90.96  Aligned_cols=112  Identities=13%  Similarity=0.136  Sum_probs=74.8

Q ss_pred             eEEEEEEeCCCCceeEEEEEe----cCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-C--------
Q psy9139           4 NYTCLADNIFGKDDIYYQVTI----LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-D--------   70 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~----~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~--------   70 (197)
                      .|++.|.|..|....+....+    ..+|.+|.+.....+.+++.|.|.+|.+.+++|.+|.|+++.... .        
T Consensus        60 ~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~  139 (232)
T 4go6_B           60 KFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSST  139 (232)
T ss_dssp             EEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC------------
T ss_pred             EEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeecc
Confidence            467788999996544332222    234566666566678899999999998777799999999973211 1        


Q ss_pred             -----cEEEEe-CCcccEE-------EECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          71 -----WQSVHV-DAEYREF-------TLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        71 -----~~~~~~-~~~~~~~-------~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                           |..+.. ......+       .+.+|.+++.|.|+|.|.|..|.|.++....+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~  197 (232)
T 4go6_B          140 PAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWL  197 (232)
T ss_dssp             -CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEE
T ss_pred             CCceeeEEEEeccCceEEEEccccEEeeecCccCCceEEEEEEECCCcCCCCcccEEe
Confidence                 211111 1111122       24578999999999999999999988754443

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=5.9e-12  Score=77.73  Aligned_cols=79  Identities=13%  Similarity=0.230  Sum_probs=64.0

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC----------CcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE----------DWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----------~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      |.+|. +.+...+.+++.|.|.++.   +.+.+|+|+|....+          .+....+....+.++|.+|.|++.|.|
T Consensus         9 pp~p~~L~v~~~T~~Si~LsW~~p~---g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~   85 (112)
T 2cui_A            9 RPRLSQLSVTDVTTSSLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSL   85 (112)
T ss_dssp             CCCCCCCEEESCCSSCEEEECCCCT---TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred             CCCCCceEEEeecCCeEEEEECCCC---CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEE
Confidence            44444 9999999999999999864   468899999984433          245666778888999999999999999


Q ss_pred             EEEEEcCCcCCCC
Q psy9139          97 NIKLVNSIGESKP  109 (197)
Q Consensus        97 ~v~a~~~~g~~~~  109 (197)
                      .|.|.+..+.+.+
T Consensus        86 ~V~A~~~~~~s~p   98 (112)
T 2cui_A           86 TLYGLRGPHKADS   98 (112)
T ss_dssp             EEEEECSSSEEEE
T ss_pred             EEEEEECCcccCC
Confidence            9999987766544

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.36  E-value=1.1e-11  Score=94.86  Aligned_cols=165  Identities=14%  Similarity=0.158  Sum_probs=105.3

Q ss_pred             eEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCC---ccccEEEEEEEeCCCCcEEEEe---
Q psy9139           4 NYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGG---AIITHYIVSYRDRTEDWQSVHV---   76 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~---~~i~~y~v~~~~~~~~~~~~~~---   76 (197)
                      +|.|...    .....+.+.+..||++|. +.+......++.+.|+++.+.+   ...+.|.|.++... .......   
T Consensus       262 n~~C~~~----~~~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g-~~~~C~~~~~  336 (483)
T 3e0g_A          262 NVVFTTE----DNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSG-KYVRLKRAEA  336 (483)
T ss_dssp             EEEEEES----SCEEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTC-CEEEECCCSS
T ss_pred             eEEEecC----CcccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECC-CCccccCCcc
Confidence            5888742    123445688889999998 8888877889999999987553   23688999987432 2222221   


Q ss_pred             -CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec-----CCCC-------------CCCeeecCCC------
Q psy9139          77 -DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST-----KGED-------------QTDWINIPLS------  131 (197)
Q Consensus        77 -~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t-----~~~~-------------~~~w~~~~~~------  131 (197)
                       ......+.+.+|.+.+.|.|+|.|.|..|.+...  ..+..     +.+|             ...|......      
T Consensus       337 ~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~--~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~  414 (483)
T 3e0g_A          337 PTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQST--ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFL  414 (483)
T ss_dssp             CSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEE--EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCC
T ss_pred             cCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccc--eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEE
Confidence             1235678999999999999999999999875421  12210     1111             2233222110      


Q ss_pred             ------------------CCcc-cccceEEEcCCCCCCeEEEEEEEEcCCCC---CCcceEEEEeee
Q psy9139         132 ------------------NLDE-ALEMPLVIENLLPATRYELTISAKNDAGS---TNKNYVFATLSV  176 (197)
Q Consensus       132 ------------------~~~~-~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~---~~~~~~~~t~~~  176 (197)
                                        .... .....+.+.+|+|++.|.|+|+|. ..|.   |+.+......|.
T Consensus       415 YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~  480 (483)
T 3e0g_A          415 CEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTT  480 (483)
T ss_dssp             CEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCC
T ss_pred             EEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECC
Confidence                              0000 002246899999999999999999 6665   555554444443

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.36  E-value=6.3e-12  Score=78.43  Aligned_cols=89  Identities=21%  Similarity=0.385  Sum_probs=67.5

Q ss_pred             CCC-CCE-EEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          27 PPG-VPN-ILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        27 ~P~-~p~-~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      +|. +|. +.+.. ..+++.|.|+++  ...++.|.+|+|.|+.. ...+...  ....+.+.+. |.+++.|.|+|+|.
T Consensus        17 ~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~--~~~~~~~~~~-L~~~t~Y~~~V~A~   92 (117)
T 1wj3_A           17 PPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL--NTNKTSAELV-LPIKEDYIIEVKAT   92 (117)
T ss_dssp             CCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE--EESSSEEEEE-CCCSSCEEEEEEEE
T ss_pred             CCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE--eCCCcEEEEE-CCCCCEEEEEEEEE
Confidence            444 565 55554 778999999998  45778899999999843 2333322  2234567777 99999999999999


Q ss_pred             cCCcCCCCCCceEeecCC
Q psy9139         102 NSIGESKPSKTIAASTKG  119 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~  119 (197)
                      |..|.+.++..+.++|..
T Consensus        93 n~~G~Gp~S~~v~~~T~~  110 (117)
T 1wj3_A           93 TDGGDGTSSEQIRIPRIT  110 (117)
T ss_dssp             ESSCCCCBCCCEEECCCC
T ss_pred             CCCccCCCCCCEEEEcCC
Confidence            999999999888887753

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.36  E-value=7.3e-12  Score=79.82  Aligned_cols=93  Identities=16%  Similarity=0.196  Sum_probs=71.7

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCC-Cc------c--ccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDG-GA------I--ITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHY   94 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~-~~------~--i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y   94 (197)
                      .|.... +.+..++.+++.|+|.+|... ++      .  +..|.|.|..  .++.+..+ .....+.++|.+|.|++.|
T Consensus        17 ~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-~~g~~ts~~v~~L~P~T~Y   95 (137)
T 1wk0_A           17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-YVGEETNITLNDLKPAMDY   95 (137)
T ss_dssp             HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-EEESCSEEEECSCCTTCEE
T ss_pred             ccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-EecCccEEEEcCCCCCCEE
Confidence            344433 677889999999999997532 21      2  5789999873  23444443 3566789999999999999


Q ss_pred             EEEEEEEcCCcCCCCCCceEeecCCC
Q psy9139          95 KINIKLVNSIGESKPSKTIAASTKGE  120 (197)
Q Consensus        95 ~~~v~a~~~~g~~~~s~~~~~~t~~~  120 (197)
                      .|+|+|.|..|.|.+|..+.++|...
T Consensus        96 ~~rV~A~n~~G~G~~S~~~~f~T~~~  121 (137)
T 1wk0_A           96 HAKVQAEYNSIKGTPSEAEIFTTLSC  121 (137)
T ss_dssp             CEEEEEEETTEECCCCCCCCEECCCS
T ss_pred             EEEEEEEeCCCcCCCCCCEEEECCCC
Confidence            99999999999999999888888644

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=99.35  E-value=3.3e-11  Score=73.34  Aligned_cols=90  Identities=17%  Similarity=0.183  Sum_probs=66.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ..|.+|. +++...+.+++.|.|.++.+++..+..|+|.|..... .  ..+....+.++|.+|.|++.|.|+|+|....
T Consensus         6 ~~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~-~--~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~   82 (104)
T 2dle_A            6 SGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD-S--SNLNVSEPRAVIPGLRSSTFYNITVCPVLGD   82 (104)
T ss_dssp             SSCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC-E--EEEEESSSEEECCSCCSSCEEEEEEEEESSS
T ss_pred             CCCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC-e--EEEcCCCCEEEECCCCCCCEEEEEEEEEECC
Confidence            4577776 8999999999999999887666667789999974322 2  2334567889999999999999999999654


Q ss_pred             cCCCCCCceEeecCC
Q psy9139         105 GESKPSKTIAASTKG  119 (197)
Q Consensus       105 g~~~~s~~~~~~t~~  119 (197)
                      ..+.+ ..+.+.|.+
T Consensus        83 ~~~~p-~~~~~~T~p   96 (104)
T 2dle_A           83 IEGTP-GFLQVHTPP   96 (104)
T ss_dssp             CCCBC-EEEEEECCC
T ss_pred             cccCC-eeEEEEccC
Confidence            33333 345555543

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.35  E-value=1.2e-11  Score=73.98  Aligned_cols=78  Identities=22%  Similarity=0.403  Sum_probs=61.3

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-cEEEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-WQSVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +|. +.+...+.+++.|+|.++.   +.+.+|.|+|+..... +.... .....+.++|.+|.|++.|.|+|.|.+..|.
T Consensus         4 ~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~   80 (94)
T 1j8k_A            4 RPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDME   80 (94)
T ss_dssp             CCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCC
T ss_pred             CCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCCCc
Confidence            444 7888889999999999876   4688999999854332 21221 2456789999999999999999999999998


Q ss_pred             CCCC
Q psy9139         107 SKPS  110 (197)
Q Consensus       107 ~~~s  110 (197)
                      +.+.
T Consensus        81 s~p~   84 (94)
T 1j8k_A           81 SQPL   84 (94)
T ss_dssp             CCCE
T ss_pred             CCCE
Confidence            8765

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2e-11  Score=74.53  Aligned_cols=79  Identities=24%  Similarity=0.458  Sum_probs=62.4

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC----CcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE----DWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+|.+|. +++...+.+++.|+|.++..    +.+|.|.|+....    .+..+.+...  .++|.+|.|++.|.|+|+|
T Consensus         7 ~~~~~P~~l~~~~~~~~sv~lsW~~p~~----~~~Y~v~y~~~~~~~~~~~~~~~~~~~--~~~l~~L~p~t~Y~~~V~A   80 (104)
T 2dkm_A            7 GPLPPPRALTLAAVTPRTVHLTWQPSAG----ATHYLVRCSPASPKGEEEEREVQVGRP--EVLLDGLEPGRDYEVSVQS   80 (104)
T ss_dssp             CSCCCCCCCEEEEECSSEEEEECCCCSS----CSEEEEEEEESSSCCSSCCEEEEESSS--EEEEESCCTTCCEEEEEEE
T ss_pred             CCCCCCceeEEEecCCCEEEEEEeCCCC----CCeEEEEEEECCCCCCcceEEEecCCC--EEEECCCCCCCEEEEEEEE
Confidence            3567776 88899999999999998752    3789999984332    3444455443  8999999999999999999


Q ss_pred             EcCCcCCCCC
Q psy9139         101 VNSIGESKPS  110 (197)
Q Consensus       101 ~~~~g~~~~s  110 (197)
                      .+..|.+.+.
T Consensus        81 ~~~~~~s~p~   90 (104)
T 2dkm_A           81 LRGPEGSEAR   90 (104)
T ss_dssp             ECSSSBCCCE
T ss_pred             ECCCCCCCCE
Confidence            9998877664

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=99.35  E-value=2.7e-12  Score=97.11  Aligned_cols=142  Identities=14%  Similarity=0.141  Sum_probs=82.1

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE----eCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH----VDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~----~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      +.+... ...+.|.|+++.+.++++. |.|+|+. ..+.|....    .......++..+|.+++.|.|+|+|.| .+.+
T Consensus        14 v~~~~~-~~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n-~~~S   90 (414)
T 3se4_A           14 VEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTS   90 (414)
T ss_dssp             CCEEEE-TTEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE-TTEE
T ss_pred             eEEEEE-CCceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee-CCcC
Confidence            555555 4568999999887666777 9999985 556787532    233444455567899999999999999 5554


Q ss_pred             CCCCceEee----cC-CCC-----------CCCeeecCCCC---------C-c----------------ccccceEEEcC
Q psy9139         108 KPSKTIAAS----TK-GED-----------QTDWINIPLSN---------L-D----------------EALEMPLVIEN  145 (197)
Q Consensus       108 ~~s~~~~~~----t~-~~~-----------~~~w~~~~~~~---------~-~----------------~~~~~~~~i~~  145 (197)
                      .++....+.    +. .+|           .+.|. .....         . .                ......+.|.+
T Consensus        91 ~~s~~~~~~~~~~~~~~pP~v~~~~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~i~~  169 (414)
T 3se4_A           91 SWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYK  169 (414)
T ss_dssp             EEEECCCBCHHHHCCCCCCEEEEEECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEEECSEEEECC
T ss_pred             CCEecCceeecccceeCCCeEEEEEcCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEecCCcEEEEcC
Confidence            432211110    11 111           34455 21110         0 0                01245689999


Q ss_pred             CCCCCeEEEEEEEEcC--CCCCCcceEEEEeeeCC
Q psy9139         146 LLPATRYELTISAKND--AGSTNKNYVFATLSVNG  178 (197)
Q Consensus       146 L~p~t~Y~v~V~a~n~--~G~~~~~~~~~t~~~~~  178 (197)
                      |.|++.|.|+|+|.|.  .|.|+.+......+.++
T Consensus       170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~  204 (414)
T 3se4_A          170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE  204 (414)
T ss_dssp             CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSC
T ss_pred             CCCCCeEEEEEEEEeccCCCCCccCcccccccccc
Confidence            9999999999999994  67777555544455444

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=99.33  E-value=1.2e-10  Score=68.70  Aligned_cols=85  Identities=25%  Similarity=0.359  Sum_probs=65.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .+|.+|. +.+.....+++.|.|.++.+. ..+.+|.|.. .  +. ....  ...+.+++.+|.|++.|.|+|.|.|..
T Consensus         2 ~~P~~P~~l~~~~~~~~sv~L~W~~~~~~-~~i~~Y~v~~-~--~~-~~~~--~~~~~~~~~~L~~~t~Y~~~V~A~n~~   74 (88)
T 1k85_A            2 MAPTAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYN-G--TA-LATT--VTGTTATISGLAADTSYTFTVKAKDAA   74 (88)
T ss_dssp             CSCCCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEE-S--SS-EEEE--ESSSEEEECCCCSSCEEEEEEEEEETT
T ss_pred             cCcCCCCccEEEeccCCEEEEEECCCCCC-CCccEEEEEE-C--CE-EEee--cCCCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            4788887 888888999999999998653 3488999984 2  11 1122  234689999999999999999999999


Q ss_pred             cC-CCCCCceEeec
Q psy9139         105 GE-SKPSKTIAAST  117 (197)
Q Consensus       105 g~-~~~s~~~~~~t  117 (197)
                      |. +.++..+.++|
T Consensus        75 G~~s~~S~~v~v~T   88 (88)
T 1k85_A           75 GNVSAASNAVSVKT   88 (88)
T ss_dssp             TEECCCCCCEEEEC
T ss_pred             CCcCCCCCCEEEEC
Confidence            97 77777776654

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.32  E-value=1.4e-10  Score=84.51  Aligned_cols=113  Identities=15%  Similarity=0.128  Sum_probs=80.3

Q ss_pred             eEEEEEEeCCCCceeE-EEEEe--cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeC-
Q psy9139           4 NYTCLADNIFGKDDIY-YQVTI--LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVD-   77 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~-~~~~~--~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~-   77 (197)
                      .+++.|.|..|....+ ..+..  ...|.+|. +.+. ...+++.|+|.+|......+..|.|+|+. ....|....+. 
T Consensus       173 ~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~  251 (314)
T 3bpo_C          173 SVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQE  251 (314)
T ss_dssp             CEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESC
T ss_pred             EEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccc
Confidence            4667888998865433 22222  24689998 6665 67889999999987444446889999984 44567654331 


Q ss_pred             ------------CcccEEEECCCCCCCEEEEEEEEEcC------Cc-CCCCCCceEeec
Q psy9139          78 ------------AEYREFTLTQLKCGTHYKINIKLVNS------IG-ESKPSKTIAAST  117 (197)
Q Consensus        78 ------------~~~~~~~i~~L~p~~~y~~~v~a~~~------~g-~~~~s~~~~~~t  117 (197)
                                  ...+.+.|.+|+|++.|.|+|+|.+.      .| .+.+|..+.+.+
T Consensus       252 ~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~  310 (314)
T 3bpo_C          252 AKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK  310 (314)
T ss_dssp             CCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESC
T ss_pred             ccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecc
Confidence                        34678999999999999999999984      45 467777666644

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.31  E-value=3.6e-10  Score=84.54  Aligned_cols=105  Identities=15%  Similarity=0.213  Sum_probs=59.2

Q ss_pred             eeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeec-CCeEEEEeeeCCC---CCccccEEEEEEEe-CCCCcEEEEe
Q psy9139           3 GNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTT-THSISILWKPSYD---GGAIITHYIVSYRD-RTEDWQSVHV   76 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~-~~~~~l~W~~~~~---~~~~i~~y~v~~~~-~~~~~~~~~~   76 (197)
                      +.++..+.|..|.+...   -....|.||. +.+.... .+++.|+|+++.+   .+..+..|.++|+. ..+.|..+..
T Consensus        10 ~~~~~~~~~~~~~~~~~---~~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~~   86 (380)
T 3lb6_C           10 CLYTFLISTTFGCTSSS---DTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIIT   86 (380)
T ss_dssp             ------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEEE
T ss_pred             hhhhheeecccccccCC---cccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEEe
Confidence            45677888888854221   1123578887 8877666 6899999999864   22457889999985 4477988775


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcC----CcCCCCCCce
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNS----IGESKPSKTI  113 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~----~g~~~~s~~~  113 (197)
                      ... ..  ...+..+..|.|+|+|.|.    .|.|.++...
T Consensus        87 ~~~-~~--~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s  124 (380)
T 3lb6_C           87 KNL-HY--KDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWA  124 (380)
T ss_dssp             SSS-EE--EEECCTTSCEEEEEEEECCHHHHSSSCCBCCCE
T ss_pred             ccE-EE--EEeecCCCceEEEEEeecCCcccCCccCccccc
Confidence            432 22  2345568999999999965    5666655443

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.30  E-value=2.9e-10  Score=82.85  Aligned_cols=144  Identities=15%  Similarity=0.153  Sum_probs=86.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEE---eCCcccEEEECCCC----CCCEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVH---VDAEYREFTLTQLK----CGTHYKI   96 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~---~~~~~~~~~i~~L~----p~~~y~~   96 (197)
                      .+|.+|. +.+......++.+.|.++.+.+ .+..|.|.++.. ...+..+.   .......+.+..+.    ..+.|.|
T Consensus        96 ~pp~~P~~l~c~~~~~~~~~c~W~~~~~~~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~  174 (314)
T 3bpo_C           96 DPESAVTELQCIWHNLSYMKCSWLPGRNTS-PDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSV  174 (314)
T ss_dssp             -CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--------CCE
T ss_pred             CCCCCCEeceEEECCCCeEEEEECCCCCCC-CCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEE
Confidence            5677887 8888888899999999987543 367899998743 33343321   22334667777665    4789999


Q ss_pred             EEEEEcCCcCCCCCCceEeec-----CCCC-------------------------------------CCCeeecCCC---
Q psy9139          97 NIKLVNSIGESKPSKTIAAST-----KGED-------------------------------------QTDWINIPLS---  131 (197)
Q Consensus        97 ~v~a~~~~g~~~~s~~~~~~t-----~~~~-------------------------------------~~~w~~~~~~---  131 (197)
                      +|.|.|..|.+..+. ..+..     +.+|                                     ...|......   
T Consensus       175 ~V~a~n~~G~~~~~~-~~~~~~~~v~P~pP~~l~~~~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~  253 (314)
T 3bpo_C          175 QIMVKDNAGKIKPSF-NIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAK  253 (314)
T ss_dssp             EEEEEETTSCSCCEE-EEECSSSSEECCCCEEEEEEEETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCC
T ss_pred             EEEEEcCCCceeccc-EEEehhheEeeCCCCEEEEEEcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccc
Confidence            999999988765431 22211     1122                                     2223221000   


Q ss_pred             -----C-CcccccceEEEcCCCCCCeEEEEEEEEcC------CC-CCCcceEE
Q psy9139         132 -----N-LDEALEMPLVIENLLPATRYELTISAKND------AG-STNKNYVF  171 (197)
Q Consensus       132 -----~-~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~------~G-~~~~~~~~  171 (197)
                           . ........+.|.+|+|++.|.|+|+|.+.      .| +|+.+..+
T Consensus       254 c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~  306 (314)
T 3bpo_C          254 CENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEM  306 (314)
T ss_dssp             CCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCE
T ss_pred             ccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCe
Confidence                 0 00012567899999999999999999984      44 35655544

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.30  E-value=1.4e-11  Score=94.67  Aligned_cols=114  Identities=16%  Similarity=0.165  Sum_probs=83.5

Q ss_pred             eEEEEEEeCCCCceeEEEEEe----cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcEE-EEe
Q psy9139           4 NYTCLADNIFGKDDIYYQVTI----LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQS-VHV   76 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~----~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~~-~~~   76 (197)
                      .|+|.|.|..|....  .+.+    ..+|.+|. +.+...+.+++.|+|.+|...+..+..|.|+|+... ..|.. ...
T Consensus       361 ~f~V~A~N~~G~~~S--~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~~~  438 (488)
T 2q7n_A          361 NFTLTGRNPLGQAQS--AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATI  438 (488)
T ss_dssp             EEEEEEEETTEEEEE--EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEEEE
T ss_pred             EEEEEEEeCCCCccc--eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEEEE
Confidence            567899999997433  2333    25789998 888778899999999998644556789999998433 34532 222


Q ss_pred             -CCcccEE--EECCCCCCCEEEEEEEEEcCCcC---CCCCCceEeecCCC
Q psy9139          77 -DAEYREF--TLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAASTKGE  120 (197)
Q Consensus        77 -~~~~~~~--~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~~t~~~  120 (197)
                       ......+  .+.+|.|++.|.|+|+|.+ .|.   |.+|..+.++|.+.
T Consensus       439 ~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~  487 (488)
T 2q7n_A          439 RGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA  487 (488)
T ss_dssp             ECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred             ecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence             2223455  9999999999999999999 776   57777777777653

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=99.28  E-value=3.5e-10  Score=76.85  Aligned_cols=87  Identities=23%  Similarity=0.321  Sum_probs=70.6

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-C-cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-D-WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~-~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +.+|. +.+...+.+++.|+|.++.   +.+.+|.|.|..... . .....+....++++|.+|.|++.|.|+|+|.+..
T Consensus       104 ~~~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~  180 (195)
T 2qbw_A          104 SSVPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDY  180 (195)
T ss_dssp             CCSSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESST
T ss_pred             CCCCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCCCcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            45565 8888999999999999875   458899999874322 2 4455566777899999999999999999999999


Q ss_pred             cCCCCCCceEeec
Q psy9139         105 GESKPSKTIAAST  117 (197)
Q Consensus       105 g~~~~s~~~~~~t  117 (197)
                      |.+.+|..+.+++
T Consensus       181 G~g~~S~~v~~~~  193 (195)
T 2qbw_A          181 YGSHHYSPISINY  193 (195)
T ss_dssp             TSSCBCCCEEEEE
T ss_pred             ccCCCCCCEEEEe
Confidence            9999888776643

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.28  E-value=9.1e-11  Score=72.18  Aligned_cols=84  Identities=17%  Similarity=0.378  Sum_probs=63.6

Q ss_pred             CCCCCCE-EEEEeec--CCeEEEEeeeCCC---CCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTT--THSISILWKPSYD---GGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~--~~~~~l~W~~~~~---~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ..|++|. +.+....  ..++.|+|.+|..   .+..+..|.|+|+. ....|..... ...+.+.|.+|.|++.|.|+|
T Consensus         6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~-~~~~~~~l~~L~p~t~Y~~~V   84 (109)
T 1uc6_A            6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL-SNGTAHTITDAYAGKEYIIQV   84 (109)
T ss_dssp             CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE-SSCSEEEETTCCSSSCEEEEE
T ss_pred             EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec-ccCCEEEEeCCCCCCEEEEEE
Confidence            5789997 6666543  5899999999863   44567889999984 3346765443 345789999999999999999


Q ss_pred             EEEcCCcCCCCCC
Q psy9139          99 KLVNSIGESKPSK  111 (197)
Q Consensus        99 ~a~~~~g~~~~s~  111 (197)
                      +|.+. |.|.+|.
T Consensus        85 Ra~~~-g~g~wS~   96 (109)
T 1uc6_A           85 AAKDN-EIGTWSD   96 (109)
T ss_dssp             ECCBS-SSCCCCC
T ss_pred             EEEeC-CCCCcCc
Confidence            99985 6655544

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-10  Score=79.19  Aligned_cols=76  Identities=17%  Similarity=0.250  Sum_probs=60.6

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCc-EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDW-QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~-~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      +.+...+.+++.|.|.++.   +.+.+|.|.|+.. .+.| ....+....+.++|.+|.|++.|.|+|.|.|..|.+.+.
T Consensus       118 l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~  194 (201)
T 2ha1_A          118 ESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLI  194 (201)
T ss_dssp             SSCCCCCSCCEEEECCCSC---TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEE
T ss_pred             eEEEecCCCeEEEEEeCCC---CCccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccE
Confidence            4666678899999999873   4789999999843 2333 344566777899999999999999999999999987654


Q ss_pred             C
Q psy9139         111 K  111 (197)
Q Consensus       111 ~  111 (197)
                      .
T Consensus       195 s  195 (201)
T 2ha1_A          195 L  195 (201)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=99.20  E-value=2.4e-10  Score=78.33  Aligned_cols=106  Identities=14%  Similarity=0.128  Sum_probs=66.2

Q ss_pred             EEEEEEeCCCCcee-EEEE--EecCCCCCCE-EEEEee-cCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeC
Q psy9139           5 YTCLADNIFGKDDI-YYQV--TILSPPGVPN-ILLQST-TTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVD   77 (197)
Q Consensus         5 y~c~a~n~~G~~~~-~~~~--~~~~~P~~p~-~~~~~~-~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~   77 (197)
                      +.+.|.|..|.... ...+  .-...|.||. +.+... ....+.|.|.+|.... ....|.|+|+..  ...|......
T Consensus        84 ~~V~a~N~~G~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~-~~l~yev~y~~~~~~~~w~~~~~~  162 (206)
T 3v6o_A           84 MWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPE-NNLQFQIRYGLSGKEVQWKMYEVY  162 (206)
T ss_dssp             EEEEEC---CCEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC---------CEEEEEEEEESSSSCCCEEEEEC
T ss_pred             EEEEEEcCCccccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCC-CcEEEEEEEEECCCCCceEEEecc
Confidence            44567788886432 2222  3346788997 665544 5789999999876432 347899999853  3578876643


Q ss_pred             C-cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          78 A-EYREFTLTQLKCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        78 ~-~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      . ....+.+.+|+|++.|.|+|+|.+..|.+.+|+
T Consensus       163 ~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe  197 (206)
T 3v6o_A          163 DAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN  197 (206)
T ss_dssp             C---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred             cCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence            3 235789999999999999999998766555443

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=99.19  E-value=4.6e-11  Score=71.25  Aligned_cols=74  Identities=18%  Similarity=0.271  Sum_probs=61.0

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +++..++.+++.|+|.++.   +.+.+|+|.|....+.  .....++.+.++++|.+|.|++.|.+.|.|.+..+.+.+
T Consensus        12 l~vt~vt~~S~~lsW~~p~---~~v~~Y~I~y~~~~g~~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S~p   87 (95)
T 2h41_A           12 ESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSL   87 (95)
T ss_dssp             TSCCCCGGGCEEEECCCSC---TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred             EEEEEeCCCeEEEEECCCC---CCccEEEEEEEeCCCCCcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCcccC
Confidence            5567788999999999864   5789999999965443  345677888999999999999999999999997766544

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.18  E-value=2.4e-10  Score=80.03  Aligned_cols=93  Identities=13%  Similarity=0.331  Sum_probs=69.2

Q ss_pred             cCCCCCCE-EE--EEeecC----CeEEEEeeeCCCC---Cc-cccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCC
Q psy9139          25 LSPPGVPN-IL--LQSTTT----HSISILWKPSYDG---GA-IITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGT   92 (197)
Q Consensus        25 ~~~P~~p~-~~--~~~~~~----~~~~l~W~~~~~~---~~-~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~   92 (197)
                      ...|.+|. +.  +...+.    ..+.|+|.+|...   ++ .+..|.|+|+. ....|.... ....+.+.|.+|+|++
T Consensus       128 ~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~-~~~~~~~~l~~L~p~t  206 (236)
T 1axi_B          128 IVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD-PILTTSVPVYSLKVDK  206 (236)
T ss_dssp             GBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-CBSSSEEEEEEEETTS
T ss_pred             ccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe-ccCCCEEEEeccCCCC
Confidence            46799997 53  444433    3499999998532   22 46789999984 445677543 2345789999999999


Q ss_pred             EEEEEEEEEcCCc--CCCCCCceEeecC
Q psy9139          93 HYKINIKLVNSIG--ESKPSKTIAASTK  118 (197)
Q Consensus        93 ~y~~~v~a~~~~g--~~~~s~~~~~~t~  118 (197)
                      .|.|+|+|....|  .+.+|..+.+.++
T Consensus       207 ~Y~vqVRa~~~~gg~ws~WS~~~~~~~p  234 (236)
T 1axi_B          207 EYEVRVRSKQRNSGNYGEFSEVLYVTLP  234 (236)
T ss_dssp             CEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence            9999999999888  7888888877765

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=99.17  E-value=3.9e-10  Score=78.43  Aligned_cols=93  Identities=16%  Similarity=0.177  Sum_probs=68.5

Q ss_pred             CCCCCCE-EEEEeec-CCeEEEEeeeCCCC-CccccEEEEEEEeC-CCCcEE-EEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTT-THSISILWKPSYDG-GAIITHYIVSYRDR-TEDWQS-VHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~-~~~~~l~W~~~~~~-~~~i~~y~v~~~~~-~~~~~~-~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+|.+|. +.+.... ...+.|+|.+|... ...+..|.|+|+.. ...|.. .......+.+.|.+|+|++.|.++|+|
T Consensus       120 v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa  199 (227)
T 1eer_B          120 VLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA  199 (227)
T ss_dssp             EECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEE
T ss_pred             EccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEE
Confidence            4689997 7776654 78999999998632 22367899999843 344654 334555778999999999999999999


Q ss_pred             EcCC----c-CCCCCCceEeecC
Q psy9139         101 VNSI----G-ESKPSKTIAASTK  118 (197)
Q Consensus       101 ~~~~----g-~~~~s~~~~~~t~  118 (197)
                      ....    | .|.+|..+.+.|.
T Consensus       200 ~~~~~~~~g~wS~WS~~~~~~t~  222 (227)
T 1eer_B          200 RMAEPSFGGFWSEWSEPVSLLTP  222 (227)
T ss_dssp             EECTTTCCEECCCCCCCEEEEC-
T ss_pred             eECCCCCCCcCCCCCCCEEEECc
Confidence            9642    3 4778887777763

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.17  E-value=2.6e-10  Score=79.84  Aligned_cols=148  Identities=17%  Similarity=0.205  Sum_probs=83.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCcc-ccEEEEEEEeCC-----CCcEEEEe----CCcccEEEECCCCCCCEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAI-ITHYIVSYRDRT-----EDWQSVHV----DAEYREFTLTQLKCGTHY   94 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~-i~~y~v~~~~~~-----~~~~~~~~----~~~~~~~~i~~L~p~~~y   94 (197)
                      .+|..|. +.+......++.+.|+++.+++.+ ...|.+.|....     ..+..+..    ......+...+|.+++.|
T Consensus        28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y  107 (236)
T 1axi_B           28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY  107 (236)
T ss_dssp             ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred             CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence            5788887 768877889999999987655544 246888887322     23444321    112344556779999999


Q ss_pred             EEEEEEEcCCcCCC-----------CCCceEe--ecCC----C----CCCCeeecCCC------C--------------C
Q psy9139          95 KINIKLVNSIGESK-----------PSKTIAA--STKG----E----DQTDWINIPLS------N--------------L  133 (197)
Q Consensus        95 ~~~v~a~~~~g~~~-----------~s~~~~~--~t~~----~----~~~~w~~~~~~------~--------------~  133 (197)
                      .|+|.| | .+.+.           +..+..+  ....    .    ....|......      .              .
T Consensus       108 ~~~V~a-N-~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~  185 (236)
T 1axi_B          108 CIKLTS-N-GGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETK  185 (236)
T ss_dssp             EEEEEE-T-TEEEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSS
T ss_pred             EEEEEE-C-CccCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCc
Confidence            999999 7 32221           1111111  1000    0    01223322110      0              0


Q ss_pred             c---c-cccceEEEcCCCCCCeEEEEEEEEcCCC--CCCcceEEEEee
Q psy9139         134 D---E-ALEMPLVIENLLPATRYELTISAKNDAG--STNKNYVFATLS  175 (197)
Q Consensus       134 ~---~-~~~~~~~i~~L~p~t~Y~v~V~a~n~~G--~~~~~~~~~t~~  175 (197)
                      .   . .....+.|.+|+|++.|.|+|+|.+..|  +|+.+..+...+
T Consensus       186 w~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~  233 (236)
T 1axi_B          186 WKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL  233 (236)
T ss_dssp             CEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECC
T ss_pred             eEEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEEC
Confidence            0   0 1246799999999999999999999888  788776665544

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=99.17  E-value=1.2e-09  Score=66.31  Aligned_cols=89  Identities=16%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             CCCCCCE-EEEEee-cCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQST-TTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~-~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .+|.+|. +.+... ...++.|+|.+..+    ..+|.|+... ..+.|..+......+.|+..+|.+++.|.|+|.|.|
T Consensus         3 ~~P~aP~~l~a~~~~~~~~v~LsW~~~~~----~~~Y~VyR~~~~~~~~~~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Avn   78 (103)
T 3mpc_A            3 SAPAFPTGLSAVLDSSGNTANLTWNAAPG----ANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYVVSAVS   78 (103)
T ss_dssp             CCCCCCEEEEEEECTTSCCEEEEEECCTT----CSEEEEEEESSTTCCCEEEEEEECSSEEEETTCCTTCCCEEEEEEEE
T ss_pred             cCCCCCceeEEEEeCCCCEEEEEEECCCC----CCEEEEEEecCCCCCcEEEeecCCCCEEEECCCCCCCEEEEEEEEEe
Confidence            5688887 777665 46799999998532    4789998764 355676655334567899999999999999999999


Q ss_pred             CCcCCCCCCceEeecC
Q psy9139         103 SIGESKPSKTIAASTK  118 (197)
Q Consensus       103 ~~g~~~~s~~~~~~t~  118 (197)
                      ..|.+.+|..+.+.+.
T Consensus        79 ~~geS~~S~~vs~~~~   94 (103)
T 3mpc_A           79 NGVETLNSAEAILQYP   94 (103)
T ss_dssp             TTEECCCCCCEECBCC
T ss_pred             CcCCcCCCccEEEECC
Confidence            8888988888776653

>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.09  E-value=1.5e-09  Score=62.13  Aligned_cols=77  Identities=19%  Similarity=0.439  Sum_probs=66.7

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEE--eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~--~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      ...++-.+.|..+.  .++|.-|++.|+  ...+.|+++.+.+..++|+|.+|+|+..|+.+|.+.|.-|.++.+ .+.+
T Consensus        18 s~pdsh~iqW~~~s--~s~I~eyiL~~R~k~~~g~Wke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs-~f~F   94 (98)
T 1oww_A           18 SQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDF   94 (98)
T ss_dssp             SCTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEE-EEEE
T ss_pred             CCCCccceEEecCC--CCCceEEEEEEEEcCCCCceeEEEecCccceEEEecCCCCcEEEEEEEEeeccCcccce-EEEE
Confidence            34678889999876  678999999999  467899999999999999999999999999999999999988876 5555


Q ss_pred             ec
Q psy9139         116 ST  117 (197)
Q Consensus       116 ~t  117 (197)
                      .|
T Consensus        95 tT   96 (98)
T 1oww_A           95 TT   96 (98)
T ss_dssp             EE
T ss_pred             Ee
Confidence            44

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.09  E-value=3.4e-10  Score=86.65  Aligned_cols=115  Identities=17%  Similarity=0.157  Sum_probs=81.5

Q ss_pred             EEEEEEeCCCCceeEEEEE--ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--CcEEEEeCC-
Q psy9139           5 YTCLADNIFGKDDIYYQVT--ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVHVDA-   78 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~--~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--~~~~~~~~~-   78 (197)
                      +++.|.|..|.......+.  -..+|.+|. +.+.....+.+.|+|.+|...+..+..|.|+|+....  .|....+.. 
T Consensus       357 f~V~A~N~lG~~~S~~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~vsv~~~  436 (483)
T 3e0g_A          357 FTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGV  436 (483)
T ss_dssp             EEEEEECSSCEEEEEEEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEEECCCBCC
T ss_pred             EEEEEEeCCCCcccceEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceEEEEEecc
Confidence            5678899999755433222  236799998 7777778899999999986544556789999984333  354333321 


Q ss_pred             --cccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEeecCCC
Q psy9139          79 --EYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAASTKGE  120 (197)
Q Consensus        79 --~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~~t~~~  120 (197)
                        ....+.+.+|.|++.|.++|+|. ..|.   +.+|....+.|.++
T Consensus       437 ~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~  482 (483)
T 3e0g_A          437 ENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA  482 (483)
T ss_dssp             SSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred             CCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence              23357899999999999999999 5665   66777777777543

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*

Probab=99.09  E-value=2.8e-09  Score=73.51  Aligned_cols=95  Identities=15%  Similarity=0.176  Sum_probs=68.9

Q ss_pred             cCCCCCCE-EEEEeec-CCeEEEEeeeCCCCC--ccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTT-THSISILWKPSYDGG--AIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~-~~~~~l~W~~~~~~~--~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ...|.||. +.+.... ...+.|+|.+|....  .....|.|+|+..  ...|..+.+......+.+.+|.|++.|.++|
T Consensus       110 iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~~~t~~~i~l~~L~Pgt~Y~vqV  189 (223)
T 3up1_A          110 IVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKV  189 (223)
T ss_dssp             SBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEESSSEEEEEGGGSCTTCEEEEEE
T ss_pred             eEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEecCceeEEeccccCCCcEEEEEE
Confidence            47899998 6665543 467999999975222  2246799999854  5678876655444456667999999999999


Q ss_pred             EEEcC----CcCCCCCCceEeecCC
Q psy9139          99 KLVNS----IGESKPSKTIAASTKG  119 (197)
Q Consensus        99 ~a~~~----~g~~~~s~~~~~~t~~  119 (197)
                      +|...    .+.+.+|..+.+.|..
T Consensus       190 R~r~~~~~~G~WSeWS~~~~~~T~~  214 (223)
T 3up1_A          190 RSIPDHYFKGFWSEWSPSYYFRTPE  214 (223)
T ss_dssp             EEEECSSCCBCCCCCCCCEEEECCC
T ss_pred             EEeeCCCCCCCCCCCCCCeEEECCC
Confidence            99875    2357788778777754

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=99.09  E-value=5.5e-09  Score=79.13  Aligned_cols=95  Identities=15%  Similarity=0.247  Sum_probs=64.2

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCC------ccccEEEEEEEeCCCCcEEEEe-CCcccEEEEC--CCCCCCEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGG------AIITHYIVSYRDRTEDWQSVHV-DAEYREFTLT--QLKCGTHY   94 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~------~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~i~--~L~p~~~y   94 (197)
                      ...|.||. +.+.... ..+.|+|.++....      .....|.|+|+.....|..... ......+.+.  +|.|++.|
T Consensus       106 ~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y  184 (419)
T 2gys_A          106 HVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTY  184 (419)
T ss_dssp             SBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTTCCTTCEE
T ss_pred             cccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCCCChhheeeecccceEEEechhhcCCCCeE
Confidence            35799996 7776655 69999999986321      2357799999965566754332 1223455665  89999999


Q ss_pred             EEEEEEEcCCc---C---CCCCCceEeecCCC
Q psy9139          95 KINIKLVNSIG---E---SKPSKTIAASTKGE  120 (197)
Q Consensus        95 ~~~v~a~~~~g---~---~~~s~~~~~~t~~~  120 (197)
                      .++|+|.+..|   .   +.+|..+.+.+...
T Consensus       185 ~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~  216 (419)
T 2gys_A          185 VARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG  216 (419)
T ss_dssp             EEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred             EEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence            99999998642   2   34556666666543

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*

Probab=99.06  E-value=3e-09  Score=77.22  Aligned_cols=105  Identities=11%  Similarity=0.121  Sum_probs=69.8

Q ss_pred             EEEEEEeCCCCceeEEEEEe--cCCCCCCE-EEEEeec-CCeEEEEeeeCCCCCccc----cEEEEEEEeC-CCCcEEEE
Q psy9139           5 YTCLADNIFGKDDIYYQVTI--LSPPGVPN-ILLQSTT-THSISILWKPSYDGGAII----THYIVSYRDR-TEDWQSVH   75 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~--~~~P~~p~-~~~~~~~-~~~~~l~W~~~~~~~~~i----~~y~v~~~~~-~~~~~~~~   75 (197)
                      ++|.|.|..|..+....+.+  ...|+||. +.+.... ...+.|+|++|...+.+.    ..|.|+|+.. ...|....
T Consensus       188 ~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~  267 (306)
T 3d85_D          188 VMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRV  267 (306)
T ss_dssp             EEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEE
T ss_pred             EEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEEe
Confidence            47899999997555543333  47899997 7776643 478999999986444333    5799999843 23444332


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                       ....+++.|   .+++.|.|+|+|.+..|.|.+|...
T Consensus       268 -~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS  301 (306)
T 3d85_D          268 -FTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWA  301 (306)
T ss_dssp             -EESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred             -eccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCC
Confidence             233456666   3699999999999988888877654

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=99.05  E-value=2.2e-08  Score=68.13  Aligned_cols=111  Identities=14%  Similarity=0.211  Sum_probs=75.0

Q ss_pred             eEEEEEEeCCCCceeEE-EEE--ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCC
Q psy9139           4 NYTCLADNIFGKDDIYY-QVT--ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDA   78 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~-~~~--~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~   78 (197)
                      .|.+.+.+..|...... .+.  ....|.||. +.+.......+.|+|++|..  .....|.|+|+.. ...|..... .
T Consensus        72 ~~~i~v~~~~g~~~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~--~~~l~yev~y~~~~~~~w~~~~~-~  148 (199)
T 2b5i_C           72 TFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDHSWTEQSV-D  148 (199)
T ss_dssp             CEEEEEECSSCTTCEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSC--STTCEEEEEEEETTCSSCEEEEE-C
T ss_pred             EEEEEEEeCCcceecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCC--CCceEEEEEEeecCCcccEEEec-c
Confidence            56666766555433222 221  224699998 77777677899999999862  2335799999853 447887653 3


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCC-----c-CCCCCCceEeec
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSI-----G-ESKPSKTIAAST  117 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~-----g-~~~~s~~~~~~t  117 (197)
                      ..+.+.|.+|+|++.|.++|+|....     | .+.+|....+.+
T Consensus       149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t  193 (199)
T 2b5i_C          149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS  193 (199)
T ss_dssp             SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC--
T ss_pred             CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecC
Confidence            35789999999999999999999753     2 355665555544

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.05  E-value=8.3e-09  Score=71.41  Aligned_cols=151  Identities=14%  Similarity=0.136  Sum_probs=92.9

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEECCCC--CCCEEEEEEEEE
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTLTQLK--CGTHYKINIKLV  101 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i~~L~--p~~~y~~~v~a~  101 (197)
                      .|.|.++.+....-.. .|.|+++.........|.++|+. ....|..+.  .....+.+.|+++.  +...|.+||+|.
T Consensus         9 lp~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A~   87 (221)
T 4doh_R            9 LPKPANITFLSINMKN-VLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAI   87 (221)
T ss_dssp             --CCEEEEEEEETTEE-EEEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEEE
T ss_pred             CCCCceeEEEEECCcE-EEEEcCCCCCCCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEEE
Confidence            3444447777655544 59999976433456789999984 556787643  23456789998864  567899999999


Q ss_pred             cCCcCCCCCCceEee-----cCCCC-----------CCCeeecCC---------------------------CCCcc---
Q psy9139         102 NSIGESKPSKTIAAS-----TKGED-----------QTDWINIPL---------------------------SNLDE---  135 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~-----t~~~~-----------~~~w~~~~~---------------------------~~~~~---  135 (197)
                      ...+.+.++....+.     ...+|           .+.|.....                           +....   
T Consensus        88 ~g~~~S~w~~~~~F~p~~~t~igPP~v~v~~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~~  167 (221)
T 4doh_R           88 WGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWS  167 (221)
T ss_dssp             SSSCBCCCEECCCBCHHHHCBCCCCEEEEECCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEEE
T ss_pred             cCCcccCCEecCceechhhCccCCCEEEEEECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEEE
Confidence            987776654322111     11111           111111000                           00000   


Q ss_pred             --cccceEEEcCCCCCCeEEEEEEEEcC--CCCCCcceEEEEeeeCC
Q psy9139         136 --ALEMPLVIENLLPATRYELTISAKND--AGSTNKNYVFATLSVNG  178 (197)
Q Consensus       136 --~~~~~~~i~~L~p~t~Y~v~V~a~n~--~G~~~~~~~~~t~~~~~  178 (197)
                        .....+.|.+|+|++.|-|+|+|...  .|.|..+...-..|..+
T Consensus       168 ~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d  214 (221)
T 4doh_R          168 QCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD  214 (221)
T ss_dssp             EEECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred             EeecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence              01346789999999999999999965  67788766665555544

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=99.03  E-value=7.7e-09  Score=72.76  Aligned_cols=111  Identities=14%  Similarity=0.209  Sum_probs=77.5

Q ss_pred             eEEEEEEeCCCCcee-EEEE--EecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCC
Q psy9139           4 NYTCLADNIFGKDDI-YYQV--TILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDA   78 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~-~~~~--~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~   78 (197)
                      .|.+.+.+..|.... ...+  .....|.||. +.+.......+.|.|++|..  .....|.|+|+. ....|..... .
T Consensus       110 ~y~i~V~~~~g~~~s~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~--~~~L~Yevry~~~~~~~W~~~~~-~  186 (247)
T 2erj_C          110 TFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDHSWTEQSV-D  186 (247)
T ss_dssp             CEEEEEECSSCTTCEEEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC--CTTEEEEEEEECSSCSSCEEEEE-C
T ss_pred             EEEEEEEECCCccccceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC--CCcEEEEEEEeeCCCCCCEEEec-C
Confidence            477777766664422 2222  2235699998 77777777899999999862  233579999984 3457887664 3


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCC-----c-CCCCCCceEeec
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSI-----G-ESKPSKTIAAST  117 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~-----g-~~~~s~~~~~~t  117 (197)
                      ..+.+.|.+|+|++.|.|+|+|....     | .+.+|..+.+.+
T Consensus       187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t  231 (247)
T 2erj_C          187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS  231 (247)
T ss_dssp             SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC
T ss_pred             CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEEC
Confidence            45789999999999999999999854     2 356666666555

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=99.02  E-value=3.4e-09  Score=83.29  Aligned_cols=170  Identities=14%  Similarity=0.130  Sum_probs=106.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCC---CCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPG---VPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~---~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|.   .|. .........+.|.|.....+...+.||+-......+....+...
T Consensus       358 D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~-~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~  436 (570)
T 3b43_A          358 DSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH-PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE  436 (570)
T ss_dssp             GCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCC-CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEE
T ss_pred             cCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCC-ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEc
Confidence            57999999999999998899999888773   222 12224566788888774332223443321111111211222223


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC---------------------------CCCCCCeeecCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK---------------------------GEDQTDWINIPL  130 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~---------------------------~~~~~~w~~~~~  130 (197)
                      .....+.|.++.......|.|.|.|..|.......+.+..+                           +.+...|.....
T Consensus       437 ~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~  516 (570)
T 3b43_A          437 NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKG  516 (570)
T ss_dssp             TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTE
T ss_pred             CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCe
Confidence            33457889999999999999999999886432221211111                           111677876542


Q ss_pred             CCCc---------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         131 SNLD---------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       131 ~~~~---------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ....         ..+...+.|.++.+...-.+.+.|.|.+|....+..+
T Consensus       517 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L  566 (570)
T 3b43_A          517 EIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATL  566 (570)
T ss_dssp             ECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEE
T ss_pred             EeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEE
Confidence            1110         0123568899999988899999999999987765544

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.01  E-value=5.4e-09  Score=78.17  Aligned_cols=149  Identities=9%  Similarity=-0.042  Sum_probs=69.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcEEE---EeC-CcccEEEEC--CCCCCCEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQSV---HVD-AEYREFTLT--QLKCGTHYKIN   97 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~~~---~~~-~~~~~~~i~--~L~p~~~y~~~   97 (197)
                      .||.+|. +.+.......+.++|+++.+.+ ....|.+.|+... ..+..+   ... +....+.+.  ++.+++.|.++
T Consensus       135 ~P~~~P~nl~C~~~~~~~l~csW~p~~~~~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~  213 (380)
T 3lb6_C          135 IPETXVQDMDCVYYNWQYLLCSWKPGIGVL-LDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYIC  213 (380)
T ss_dssp             CTTSSCEEEEEEEETTTEEEEEEECC-------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEE
T ss_pred             CCCCCCcEeEEEECCCcEEEEEEcCCCCCC-CCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEE
Confidence            5567787 8888888999999999976543 3567999998432 223322   112 233356665  56788999999


Q ss_pred             EEEEcCCcCCCCCCceEeec-----CCCC-------------CCCeeecCCCCC-c---------------c--cccceE
Q psy9139          98 IKLVNSIGESKPSKTIAAST-----KGED-------------QTDWINIPLSNL-D---------------E--ALEMPL  141 (197)
Q Consensus        98 v~a~~~~g~~~~s~~~~~~t-----~~~~-------------~~~w~~~~~~~~-~---------------~--~~~~~~  141 (197)
                      |.+.|..|..... ...+.+     +.+|             ...|........ .               .  .....+
T Consensus       214 V~a~n~~G~~~s~-~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~  292 (380)
T 3lb6_C          214 VNGSSENKPIRSS-YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENET  292 (380)
T ss_dssp             EEEC-----CCCE-EEEECGGGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC--------CCEESSSC
T ss_pred             EEEEcCCeeeccc-cEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCCCceEecccceE
Confidence            9999988765432 122211     1111             344543321100 0               0  001246


Q ss_pred             EEcC-CCCCCeEEEEEEEEcC-----CC-CCCcceEEEEeee
Q psy9139         142 VIEN-LLPATRYELTISAKND-----AG-STNKNYVFATLSV  176 (197)
Q Consensus       142 ~i~~-L~p~t~Y~v~V~a~n~-----~G-~~~~~~~~~t~~~  176 (197)
                      .+.+ |+|++.|.|+|+|...     .| +|+.+......+.
T Consensus       293 ~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~  334 (380)
T 3lb6_C          293 YTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGE  334 (380)
T ss_dssp             C------------CCEEEEECTTTCSSCCCCCCCCC------
T ss_pred             EEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCC
Confidence            6888 9999999999999943     23 2555544444443

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=98.98  E-value=1.2e-08  Score=69.85  Aligned_cols=142  Identities=15%  Similarity=0.198  Sum_probs=89.0

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe------CCCCcEEEE--eCCcccEEEECC-CCCCCEEEEE
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD------RTEDWQSVH--VDAEYREFTLTQ-LKCGTHYKIN   97 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~------~~~~~~~~~--~~~~~~~~~i~~-L~p~~~y~~~   97 (197)
                      .|.|.++.+....-. ..|.|+++...... ..|.++|+.      ....|..+.  .....+.+.|.+ |..+..|.+|
T Consensus         7 lp~P~nv~~~s~n~~-~iL~W~p~~~~~~~-~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~R   84 (206)
T 4doh_B            7 LPAPQQLSVLSTNMK-HLLMWSPVIAPGET-VYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLR   84 (206)
T ss_dssp             CCCCCCCEEEEETTE-EEEECCCCCCSSSC-CEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEEE
T ss_pred             CCCCCeeEEEEeCCE-EEEEECCCCCCCCC-EEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEEE
Confidence            444444666655444 79999998533333 569999983      667898643  345667888984 7778899999


Q ss_pred             EEEEcCCcCCCCCCceEe-----ecCCCC-----------CCCe--------------eecCCCCCc-c---cccceEEE
Q psy9139          98 IKLVNSIGESKPSKTIAA-----STKGED-----------QTDW--------------INIPLSNLD-E---ALEMPLVI  143 (197)
Q Consensus        98 v~a~~~~g~~~~s~~~~~-----~t~~~~-----------~~~w--------------~~~~~~~~~-~---~~~~~~~i  143 (197)
                      |+|.+..+.+.++....+     ...++|           .+.|              ......... .   .....++|
T Consensus        85 VrA~~~~~~S~w~~~~~f~~~~~t~i~PP~v~v~~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i  164 (206)
T 4doh_B           85 VRATLGSQTSAWSILKHPFNRQSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHL  164 (206)
T ss_dssp             EEEEETTEECCCEECSSCBCGGGCBCCCCCEEEEEETTEEEEEECCCCTTCEEEEEEEESSSSCCCEEEEECCSSSEEEE
T ss_pred             EEEEcCCCccCccccccccchhhcccCCCeEEEEeCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEEeEEccCCeEEEE
Confidence            999998877766433222     111222           1111              111111000 0   11356899


Q ss_pred             cCCCCCCeEEEEEEEEcC--CCCCCcceE
Q psy9139         144 ENLLPATRYELTISAKND--AGSTNKNYV  170 (197)
Q Consensus       144 ~~L~p~t~Y~v~V~a~n~--~G~~~~~~~  170 (197)
                      .+|+|++.|-|+|+|...  .|.|..+..
T Consensus       165 ~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~  193 (206)
T 4doh_B          165 ETMEPGAAYCVKAQTFVKAIGRYSAFSQT  193 (206)
T ss_dssp             EECCSSSCEEEEEEEEEGGGTEECCCCCC
T ss_pred             eCCCCCCcEEEEEEEEecCCCCCCCCCCC
Confidence            999999999999999875  355664433

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=98.97  E-value=5e-08  Score=66.49  Aligned_cols=113  Identities=13%  Similarity=0.059  Sum_probs=76.2

Q ss_pred             EEEEEEeCCCCceeEEEEEe---cCCCCCCEEEEEeecCCeEEEEeeeCCCCC-c---------cccEEEEEEEeCCCCc
Q psy9139           5 YTCLADNIFGKDDIYYQVTI---LSPPGVPNILLQSTTTHSISILWKPSYDGG-A---------IITHYIVSYRDRTEDW   71 (197)
Q Consensus         5 y~c~a~n~~G~~~~~~~~~~---~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~-~---------~i~~y~v~~~~~~~~~   71 (197)
                      +++.|.|..|.+.-+.....   ...++||.+.+ ....+++.|.|.+|...+ +         .+..|.|.|......-
T Consensus        68 ~rV~A~~~~~~S~~s~~~f~~~~~t~~~PP~v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~  146 (201)
T 3lqm_A           68 LRVRAEFADEHSDWVQITFSPVDDTIIGPPGMQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDE  146 (201)
T ss_dssp             EEEEEEETTEECCCEEEEECHHHHSBCCCCEEEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCC
T ss_pred             EEEEEecCCCcCcceeeeeeecccCeeCCCEEEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCc
Confidence            35567777653332222121   25678888665 455789999999985221 2         3678999876432221


Q ss_pred             EEEEeCCcccEEEECCCCCCCEEEEEEEEEcC--CcCCCCCCceEeecCC
Q psy9139          72 QSVHVDAEYREFTLTQLKCGTHYKINIKLVNS--IGESKPSKTIAASTKG  119 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~--~g~~~~s~~~~~~t~~  119 (197)
                      .. ........++|.+|+|++.|.|+|+|.+.  .|.|.+|....+.|..
T Consensus       147 ~~-~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~  195 (201)
T 3lqm_A          147 KF-QITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTH  195 (201)
T ss_dssp             CE-EECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCC
T ss_pred             EE-EEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCC
Confidence            11 23455678999999999999999999986  5778888888887753

>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.96  E-value=1.5e-09  Score=60.13  Aligned_cols=70  Identities=17%  Similarity=0.341  Sum_probs=58.1

Q ss_pred             EEeeeCCCCCccccEEEEEEE--eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec
Q psy9139          45 ILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        45 l~W~~~~~~~~~i~~y~v~~~--~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      +.|++|.  .+.+..|.+.|+  .....|+++.++...++|+|.+|.||..|..++.+.-..|.++.. .+.+.|
T Consensus         2 IqWnap~--~shi~~YIL~w~pk~~~~~wKev~IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evt-rfdfTT   73 (89)
T 1q38_A            2 RGSNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDFTT   73 (89)
T ss_dssp             CCCCCSS--CSSCSEEEEEEEETTTTCCCEEEEECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEE-EEEECS
T ss_pred             ccccCCC--cccceeeEEEEEecCCCCccEEEEcCCccceEEEeccCCCcEEEEEEEeeeecccCCce-EEEEEe
Confidence            5798765  456889999999  467789999999999999999999999999999999888877653 344444

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=98.93  E-value=1.5e-08  Score=72.25  Aligned_cols=170  Identities=17%  Similarity=0.107  Sum_probs=100.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      +.|.|+|.|.|..|..+..+.+.+..+|....   ..........+.|.|.....+...+.+|+-...............
T Consensus        72 d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~  151 (284)
T 2rik_A           72 DAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV  151 (284)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEE
T ss_pred             cCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEc
Confidence            47999999999999888888888888774221   112223456778888763222222222211111111222222333


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC---------------------------CCCCCeeecCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG---------------------------EDQTDWINIPL  130 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~---------------------------~~~~~w~~~~~  130 (197)
                      .....+.|.++.......|.|.+.|..|.......+.+...+                           .+...|.....
T Consensus       152 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~  231 (284)
T 2rik_A          152 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKR  231 (284)
T ss_dssp             TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTE
T ss_pred             CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCE
Confidence            445678899999999999999999887653322222221111                           01455655432


Q ss_pred             CCCcc--------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         131 SNLDE--------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       131 ~~~~~--------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      .....        .....+.|.++.....-.+.+.|.|..|....+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~  279 (284)
T 2rik_A          232 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGS  279 (284)
T ss_dssp             EECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred             ECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEE
Confidence            22110        01246778888888888999999999987654443

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}

Probab=98.92  E-value=1e-07  Score=65.82  Aligned_cols=115  Identities=15%  Similarity=0.267  Sum_probs=76.6

Q ss_pred             eeEEEEEEeCCCCceeE---EEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCC---C--ccccEEEEEEEeCCCCcEE
Q psy9139           3 GNYTCLADNIFGKDDIY---YQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDG---G--AIITHYIVSYRDRTEDWQS   73 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~~---~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~---~--~~i~~y~v~~~~~~~~~~~   73 (197)
                      ..|.+.+.|..|.....   +.+.-...|.||. +.+.  ....+.|+|.+|...   .  .....|.|+|+.....|..
T Consensus        73 ~~y~v~v~~~~g~~~s~~~~f~~~~iVkp~PP~nltv~--~~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~  150 (219)
T 3tgx_A           73 DIFSVQITDQSGQYSQECGSFLLAESIKPAPPFDVTVT--FSGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAV  150 (219)
T ss_dssp             CEEEEEEECTTSSCEEEEEEEEGGGCBCCCCCEEEEEE--ESSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTS
T ss_pred             ceEEEEEEeCCCCEEecCceEeeeeeEEeCCCCceEEE--eCCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCcee
Confidence            36778888887853322   2223346799997 6555  357999999987531   1  1246799999966567742


Q ss_pred             ----EEe--CCcccEEEECCCCCCCEEEEEEEEEcCC-----c-CCCCCCceEeecCC
Q psy9139          74 ----VHV--DAEYREFTLTQLKCGTHYKINIKLVNSI-----G-ESKPSKTIAASTKG  119 (197)
Q Consensus        74 ----~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~-----g-~~~~s~~~~~~t~~  119 (197)
                          ..+  ......+.+.+|.|++.|.++|+|....     | .+.+|....+.|.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~  208 (219)
T 3tgx_A          151 SPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQS  208 (219)
T ss_dssp             CCEEEEECSSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred             cccceeEecCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCc
Confidence                122  2334566778999999999999998764     3 35667777777654

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=98.92  E-value=5.4e-08  Score=66.96  Aligned_cols=91  Identities=19%  Similarity=0.229  Sum_probs=67.2

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCC--ccccEEEEEEEeCCCCcEE---EEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGG--AIITHYIVSYRDRTEDWQS---VHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~--~~i~~y~v~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .+|. +.+.....+.+.|+|..|....  ..+..|.|+|+..+..|..   ..+....+.+.|.+|.|++.|.++|+|..
T Consensus       107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~  186 (214)
T 2b5i_B          107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKP  186 (214)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEee
Confidence            8997 7777777789999999976321  1256899999855445543   22345567899999999999999999997


Q ss_pred             CCc----CCCCCCceEeecCC
Q psy9139         103 SIG----ESKPSKTIAASTKG  119 (197)
Q Consensus       103 ~~g----~~~~s~~~~~~t~~  119 (197)
                      ..|    .|.+|..+.+.|.+
T Consensus       187 ~~~~~G~WS~WS~~~~~~T~~  207 (214)
T 2b5i_B          187 LQGEFTTWSPWSQPLAFRTKP  207 (214)
T ss_dssp             SCCSSCCCCCCCCCEEEECCC
T ss_pred             CCCCCCCccCCCCCEEEEcCC
Confidence            643    36777777777753

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=98.91  E-value=1.4e-07  Score=74.98  Aligned_cols=165  Identities=15%  Similarity=0.157  Sum_probs=102.7

Q ss_pred             CCeeEEEEEEeCCCCceeE--EEEEecCCCCCCEEE----EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIY--YQVTILSPPGVPNIL----LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~--~~~~~~~~P~~p~~~----~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~   74 (197)
                      +.|.|+|.|.|..|....+  ..+.+..++.+|.+.    ........+.|.|.... +...+.+|+-........  ..
T Consensus       437 d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~--~~  513 (642)
T 1e07_A          437 NSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSP--RL  513 (642)
T ss_pred             hCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCC--cE
Confidence            5799999999999976544  455666655566532    12235678889998752 222233221111111111  12


Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC-CCceEeecCCC----------------------------CCCCe
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP-SKTIAASTKGE----------------------------DQTDW  125 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~-s~~~~~~t~~~----------------------------~~~~w  125 (197)
                      .+......+.|.++.....+.|.|.|.|..|.... ...+.+...+.                            +...|
T Consensus       514 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W  593 (642)
T 1e07_A          514 QLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSW  593 (642)
T ss_pred             EEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEE
Confidence            22333457899999999999999999999886432 22222221111                            04567


Q ss_pred             eecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         126 INIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       126 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .........   ...+.|.++.+...-.+.+.|.|..|....+..+
T Consensus       594 ~~~g~~i~~---~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l  636 (642)
T 1e07_A          594 RINGIPQQH---TQVLFIAKITPNNNGTYACFVSNLATGRNNSIVK  636 (642)
T ss_pred             EECCEECcc---CceEEECcccccCCeEEEEEEEecccCcceeEEE
Confidence            665443332   4578999999999999999999999988765554

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*

Probab=98.89  E-value=2.8e-08  Score=72.18  Aligned_cols=104  Identities=10%  Similarity=0.038  Sum_probs=56.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec-------------C---CCCCCEEEEEeecCC-eEEEEeeeCCCCCccccEEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL-------------S---PPGVPNILLQSTTTH-SISILWKPSYDGGAIITHYIVS   63 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~-------------~---~P~~p~~~~~~~~~~-~~~l~W~~~~~~~~~i~~y~v~   63 (197)
                      ++|+|+|.|   .|.....+.+.+.             .   +|.++.+.+...... .+.+.|.++.++..+ ..|...
T Consensus        62 d~G~YtC~~---~~~~~~~~~l~v~~~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~~~l~-~~~~~~  137 (306)
T 3d85_D           62 DAGQYTCHK---GGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLT-FSVKSS  137 (306)
T ss_dssp             GCEEEEEEE---TTEEEEEEEEEEEEEETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCCSSEE-EEEEEE
T ss_pred             CCceEEEee---CCcccceEEEEEEeccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCCCcee-EEEEEE
Confidence            479999999   3655555444442             2   234444666654433 899999997754332 334443


Q ss_pred             EEeCCCCcEEEE----------eCCcc--cE--EEECCCCCC----CEEEEEEEEEcCCcCCC
Q psy9139          64 YRDRTEDWQSVH----------VDAEY--RE--FTLTQLKCG----THYKINIKLVNSIGESK  108 (197)
Q Consensus        64 ~~~~~~~~~~~~----------~~~~~--~~--~~i~~L~p~----~~y~~~v~a~~~~g~~~  108 (197)
                      +......|..+.          ++...  ..  +.+..+.|.    ..|.|.|.|.|..|...
T Consensus       138 r~~~~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s  200 (306)
T 3d85_D          138 RGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQ  200 (306)
T ss_dssp             ECSSSCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEE
T ss_pred             ecCCCCcceECCCCCCCccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccc
Confidence            222222232211          11111  11  123456665    48999999999988643

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=98.86  E-value=7.5e-09  Score=71.10  Aligned_cols=84  Identities=17%  Similarity=0.204  Sum_probs=57.0

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEECC--CCCCCEEEEEEEEE
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTLTQ--LKCGTHYKINIKLV  101 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i~~--L~p~~~y~~~v~a~  101 (197)
                      .|.|.++.+....-.. .|.|+++....+.+..|.|+|+. ....|..+.  .....+.+.|+.  +.+...|.+||+|.
T Consensus         8 lp~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~   86 (211)
T 3g9v_A            8 SLKPQRVQFQSRNFHN-ILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAA   86 (211)
T ss_dssp             -CCCEEEEEEEETTEE-EEEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEE
T ss_pred             CCCCceeEEEEEcCce-EEEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEE
Confidence            3443347776655555 59999986444336789999984 446787542  234456777764  57899999999999


Q ss_pred             cCCcCCCCCC
Q psy9139         102 NSIGESKPSK  111 (197)
Q Consensus       102 ~~~g~~~~s~  111 (197)
                      +..+.+.++.
T Consensus        87 ~~~~~S~ws~   96 (211)
T 3g9v_A           87 SAGSYSEWSM   96 (211)
T ss_dssp             ETTEECCCEE
T ss_pred             CCCCcCCCEe
Confidence            9888777653

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=98.86  E-value=2.1e-08  Score=78.75  Aligned_cols=168  Identities=17%  Similarity=0.133  Sum_probs=100.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-E--EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-I--LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~--~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      ++|.|+|.|.|..|..+.++.+.+..+|.... +  .........+.|.|.....+...+.||+-...............
T Consensus       264 D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~  343 (570)
T 3b43_A          264 DAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV  343 (570)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEE
T ss_pred             cCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEE
Confidence            47999999999999988888888887763211 1  01113456678888763322222332221111111111222222


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC---------------------------CCCCCCeeecCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK---------------------------GEDQTDWINIPL  130 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~---------------------------~~~~~~w~~~~~  130 (197)
                      .....+.|.++.......|.|.|.|..|....+..+.+..+                           +.+...|.+...
T Consensus       344 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~  423 (570)
T 3b43_A          344 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKR  423 (570)
T ss_dssp             TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTE
T ss_pred             CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCE
Confidence            33456888999999999999999999986543222222111                           111577876543


Q ss_pred             CCCcc--------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         131 SNLDE--------ALEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       131 ~~~~~--------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      .....        .....+.|.++.....-.+.+.|.|..|.....
T Consensus       424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~  469 (570)
T 3b43_A          424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCV  469 (570)
T ss_dssp             ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred             ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEE
Confidence            22210        012356788999888889999999999976543

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=98.84  E-value=1.3e-07  Score=64.71  Aligned_cols=130  Identities=10%  Similarity=0.119  Sum_probs=72.5

Q ss_pred             EEEEee-cCCeEEEEeeeCCCCCccccEEEEEEEeCCC------------CcEEEEeC-CcccEEEECCCCCCCEEEEEE
Q psy9139          33 ILLQST-TTHSISILWKPSYDGGAIITHYIVSYRDRTE------------DWQSVHVD-AEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        33 ~~~~~~-~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~------------~~~~~~~~-~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      +.+... .-..+...|+++.+...+...|.+.+.....            ....+... .....+.+..+...+.|.|+|
T Consensus         7 lsC~~~~~~~~~~C~W~~g~~~~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~Y~~~V   86 (206)
T 3v6o_A            7 ISCETDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGYTMWI   86 (206)
T ss_dssp             CEEEECTTSSCEEEEECCCC--------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSCEEEEE
T ss_pred             EEEEECCCCcEEEEEecCCCcCCcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcccEEEEE
Confidence            555555 4578999999977554442268887763210            01222222 334578888888899999999


Q ss_pred             EEEcCCcCCCCCCceEee-----cCCCC--------------CC-------------------------CeeecCCCCCc
Q psy9139          99 KLVNSIGESKPSKTIAAS-----TKGED--------------QT-------------------------DWINIPLSNLD  134 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~-----t~~~~--------------~~-------------------------~w~~~~~~~~~  134 (197)
                      .|.|..|.... ..+.+.     .+.+|              ..                         .|........ 
T Consensus        87 ~a~N~~G~~~s-~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~~~~-  164 (206)
T 3v6o_A           87 RINHSLGSLDS-PPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVYDA-  164 (206)
T ss_dssp             EEC---CCEEC-CCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEECC--
T ss_pred             EEEcCCccccC-CcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEecccC-
Confidence            99999886432 222221     11111              11                         2222111100 


Q ss_pred             ccccceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         135 EALEMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       135 ~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                        ....+.+.+|+|++.|.|+|+|.+..|.|.
T Consensus       165 --~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~  194 (206)
T 3v6o_A          165 --KSKSVSLPVPDLCAVYAVQVRCKRLDGLGY  194 (206)
T ss_dssp             ----CEEEECCSCTTSCEEEEEEEEETTSCSC
T ss_pred             --cceeEEeecCCCCCEEEEEEEEecCCCCCc
Confidence              023588999999999999999999766654

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=98.82  E-value=5.4e-08  Score=74.59  Aligned_cols=81  Identities=21%  Similarity=0.276  Sum_probs=65.7

Q ss_pred             EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          32 NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        32 ~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .+++...+.++++|+|.+|  .++.+..|.|.|......  .....+....++.+|.+|.|++.|.|+|+|.... .+..
T Consensus       375 ~l~~~~~~~~s~~l~W~~p--~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~-~g~~  451 (461)
T 3csg_A          375 NLEVVAATPTSLLISWDAS--YSSSVSYYRITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAYSYY-YYYY  451 (461)
T ss_dssp             CCEEEEECSSCEEEECCCT--TGGGCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTT-SCBC
T ss_pred             ceEEeccCCCeEEEEecCC--CCCcceEEEEEEEECCCCccceEEEecCCCceEEecCCCCCCEEEEEEEEEecc-CCCC
Confidence            4889999999999999998  356789999999753322  3555567778899999999999999999999988 7777


Q ss_pred             CCceEe
Q psy9139         110 SKTIAA  115 (197)
Q Consensus       110 s~~~~~  115 (197)
                      |..+.+
T Consensus       452 s~~~~~  457 (461)
T 3csg_A          452 SSPISI  457 (461)
T ss_dssp             SCCEEE
T ss_pred             CCCEEE
Confidence            766543

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=98.80  E-value=1.1e-08  Score=71.03  Aligned_cols=147  Identities=16%  Similarity=0.210  Sum_probs=84.0

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe-------CCcccEEEE--CCCCCCCEEEEEEE
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV-------DAEYREFTL--TQLKCGTHYKINIK   99 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~-------~~~~~~~~i--~~L~p~~~y~~~v~   99 (197)
                      .|. +.+.......+.+.|+++.+.+.....|.+.|+..+..|..+..       ......+.+  .++..++.|.|+|.
T Consensus        23 ~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~V~  102 (227)
T 1eer_B           23 GPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVT  102 (227)
T ss_dssp             STTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETTSCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEEEE
T ss_pred             CCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCCCCceeccceeccCCCCCceEEEEeCCCcceeeEEEEEEEE
Confidence            344 77777788899999999875443457799999854444544321       112334444  46778899999999


Q ss_pred             EEcCCcCCC----------CCCc--eEeecCC-CC--CCCeeecCCC-----------------C-Cc-----ccccceE
Q psy9139         100 LVNSIGESK----------PSKT--IAASTKG-ED--QTDWINIPLS-----------------N-LD-----EALEMPL  141 (197)
Q Consensus       100 a~~~~g~~~----------~s~~--~~~~t~~-~~--~~~w~~~~~~-----------------~-~~-----~~~~~~~  141 (197)
                      +.+..+...          +..+  +.+.... ..  .+.|......                 . ..     ......+
T Consensus       103 a~~~~~~~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~  182 (227)
T 1eer_B          103 AASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTEC  182 (227)
T ss_dssp             ETTSCEEEEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEECTTCCEE
T ss_pred             ecCCCccEEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEEecCceEE
Confidence            876443110          1111  1111100 00  1222221100                 0 00     0124578


Q ss_pred             EEcCCCCCCeEEEEEEEEcCC----C-CCCcceEEEEeee
Q psy9139         142 VIENLLPATRYELTISAKNDA----G-STNKNYVFATLSV  176 (197)
Q Consensus       142 ~i~~L~p~t~Y~v~V~a~n~~----G-~~~~~~~~~t~~~  176 (197)
                      .|.+|+|++.|.|+|+|....    | +|+.+..+...+.
T Consensus       183 ~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~  222 (227)
T 1eer_B          183 VLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP  222 (227)
T ss_dssp             EECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred             EEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence            999999999999999999642    2 3666655555543

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.78  E-value=1.5e-08  Score=64.10  Aligned_cols=44  Identities=14%  Similarity=0.170  Sum_probs=36.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|....++
T Consensus        84 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  127 (130)
T 1wfo_A           84 ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGP  127 (130)
T ss_dssp             CCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCC
T ss_pred             ceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCC
Confidence            56799999999999999999999999999877766666554443

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=98.74  E-value=5.9e-08  Score=66.52  Aligned_cols=98  Identities=17%  Similarity=0.183  Sum_probs=64.5

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCCC-------------C------------------CCee
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED-------------Q------------------TDWI  126 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~~-------------~------------------~~w~  126 (197)
                      .....+.|.++.....+.|.|.|.|..|.......+.+...+.+             .                  ..|.
T Consensus        73 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~  152 (215)
T 3mtr_A           73 PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWR  152 (215)
T ss_dssp             TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEE
T ss_pred             CCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEE
Confidence            34567999999999999999999999886532222222211111             1                  2232


Q ss_pred             ecCCCCCcc--------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         127 NIPLSNLDE--------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       127 ~~~~~~~~~--------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      .........        .....+.|.+|.+++.|.|+|+|.|..|.++++......+
T Consensus       153 ~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T  209 (215)
T 3mtr_A          153 AVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT  209 (215)
T ss_dssp             ETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred             ECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEe
Confidence            222111000        0126799999999999999999999999999776555444

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=2.4e-08  Score=62.56  Aligned_cols=40  Identities=13%  Similarity=0.218  Sum_probs=34.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|+.+..+...|.+
T Consensus        84 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e  123 (124)
T 2ed9_A           84 NLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE  123 (124)
T ss_dssp             CSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred             cCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence            5679999999999999999999999999977766666554

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.70  E-value=6e-08  Score=60.41  Aligned_cols=42  Identities=14%  Similarity=0.096  Sum_probs=38.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGG  179 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~  179 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+..+...|.++.
T Consensus        74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v  115 (120)
T 1ujt_A           74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES  115 (120)
T ss_dssp             CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred             cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence            568999999999999999999999999998887878887766

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.69  E-value=1.2e-08  Score=64.90  Aligned_cols=51  Identities=14%  Similarity=0.146  Sum_probs=42.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHSWSPI  188 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p~~~~~  188 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+..+.+.|..+.|.+|....+
T Consensus        81 ~ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l  131 (137)
T 1wk0_A           81 ETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI  131 (137)
T ss_dssp             CSEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred             ccEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence            568999999999999999999999999998777777888777766655444

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=98.68  E-value=1.8e-07  Score=70.83  Aligned_cols=89  Identities=19%  Similarity=0.271  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCC-CccccEEEEEEEeCCCCcE---EEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDG-GAIITHYIVSYRDRTEDWQ---SVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~-~~~i~~y~v~~~~~~~~~~---~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .|.||.+.+.. ..+.+.|.|.+|... ...+..|.|+|+..+..|.   ...+. ..+.+.|.+|+|++.|.|+|+|.+
T Consensus       321 ~p~PP~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~  398 (419)
T 2gys_A          321 QMAPPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ-NAHSMALPALEPSTRYWARVRVRT  398 (419)
T ss_dssp             CCCCCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEE-SCSEEECCCCCSSCCCEEEEEEEE
T ss_pred             EECCCCeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCCcceeeccccc-cccEEEeccCCCCCeEEEEEEEEE
Confidence            47788654444 478999999998521 1146789999985545554   12222 467899999999999999999998


Q ss_pred             CCc-----CCCCCCceEeec
Q psy9139         103 SIG-----ESKPSKTIAAST  117 (197)
Q Consensus       103 ~~g-----~~~~s~~~~~~t  117 (197)
                      ..|     .+.+|..+.+.|
T Consensus       399 ~~g~~~G~wS~WS~~~~~~t  418 (419)
T 2gys_A          399 SRTGYNGIWSEWSEARSWDT  418 (419)
T ss_dssp             CCTTCCBCCCCCCCCEECCC
T ss_pred             cCCCCCCccCCCCCCeEeeC
Confidence            763     245565555543

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.67  E-value=8.4e-08  Score=59.66  Aligned_cols=46  Identities=17%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|+.+..+...|..+.+.+|
T Consensus        75 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~P  120 (121)
T 2dlh_A           75 SQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS  120 (121)
T ss_dssp             CSEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSCCC
T ss_pred             ceEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCCCC
Confidence            5679999999999999999999999999987667677766665544

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.67  E-value=6e-08  Score=58.84  Aligned_cols=47  Identities=15%  Similarity=0.144  Sum_probs=39.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFHS  184 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p~  184 (197)
                      ...|+|.+|+|++.|.|+|+|.|..|.|..+..+...+..+.+..|+
T Consensus        60 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~P~~Pp  106 (106)
T 2dju_A           60 TTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPSSG  106 (106)
T ss_dssp             SSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSSCCCCC
T ss_pred             ccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCCCCCCC
Confidence            55799999999999999999999999999777776777666665543

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*

Probab=98.66  E-value=1.4e-06  Score=59.49  Aligned_cols=93  Identities=14%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCC---CccccEEEEEEEeCCCCcEEE--EeC--CcccEEEECCCCCCCEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDG---GAIITHYIVSYRDRTEDWQSV--HVD--AEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~---~~~i~~y~v~~~~~~~~~~~~--~~~--~~~~~~~i~~L~p~~~y~~~   97 (197)
                      ..|.||. +.+....+..+.|+|.+|...   ...-..|.|+|+.....|...  .+.  .....+.+.+|.|++.|.++
T Consensus        96 Vkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~vq  175 (207)
T 1iar_B           96 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRAR  175 (207)
T ss_dssp             BCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEE
T ss_pred             cccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhheeeeeecCCcEEEEEHHHCCCCCEEEEE
Confidence            6799997 766644566899999987521   112456999998655555432  232  33344555789999999999


Q ss_pred             EEEEcC--Cc-CCCCCCceEeecC
Q psy9139          98 IKLVNS--IG-ESKPSKTIAASTK  118 (197)
Q Consensus        98 v~a~~~--~g-~~~~s~~~~~~t~  118 (197)
                      |+|...  .| .|.+|..+.+.+.
T Consensus       176 VR~k~~~~~G~WSeWS~~~~~~t~  199 (207)
T 1iar_B          176 VRAWAQAYNTTWSEWSPSTKWHNS  199 (207)
T ss_dssp             EEEECGGGTCCCCCCCCCEEEC--
T ss_pred             EEEecCCCCCCCCCCCcCeEEECC
Confidence            999965  34 4677777777664

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.65  E-value=2.6e-07  Score=58.45  Aligned_cols=49  Identities=12%  Similarity=0.012  Sum_probs=39.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCc-CCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK-AFHSWS  186 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~-~~p~~~  186 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+..+.+ .+|...
T Consensus        78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l  127 (134)
T 2edx_A           78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKV  127 (134)
T ss_dssp             CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCC
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCcee
Confidence            5689999999999999999999999999987766677776666 344333

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.64  E-value=7.2e-08  Score=59.80  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=35.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...+++.+|+|++.|.|+|+|.|..|.|+.+......|....+.
T Consensus        72 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~  115 (118)
T 1x3d_A           72 QKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGP  115 (118)
T ss_dssp             CSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCC
T ss_pred             CcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCc
Confidence            45799999999999999999999999999776665555544443

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.64  E-value=8.5e-08  Score=58.36  Aligned_cols=44  Identities=23%  Similarity=0.244  Sum_probs=36.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+..+...+....+.
T Consensus        60 ~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~P~  103 (106)
T 1x4x_A           60 GLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGP  103 (106)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCCSC
T ss_pred             cceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCCcC
Confidence            45799999999999999999999999999777676666555444

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=98.61  E-value=5.8e-06  Score=65.73  Aligned_cols=159  Identities=15%  Similarity=0.168  Sum_probs=99.2

Q ss_pred             CCeeEEEEEEeCCCCcee--EEEEEecCCCCCCEEEEE----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC---c
Q psy9139           1 MVGNYTCLADNIFGKDDI--YYQVTILSPPGVPNILLQ----STTTHSISILWKPSYDGGAIITHYIVSYRDRTED---W   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~--~~~~~~~~~P~~p~~~~~----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~---~   71 (197)
                      +.|.|+|.|.|..|....  .+.+.+..+|.+|.+...    ......+.|.|.....   +   ..+.|...+..   .
T Consensus       259 d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~---p---~~v~W~~~g~~l~~~  332 (642)
T 1e07_A          259 NSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQ---N---TTYLWWVNNQSLPVS  332 (642)
T ss_pred             CCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCC---C---ccEEEEECCccCCCc
Confidence            579999999999996543  456666666666653221    1224568888876432   2   13444422111   0


Q ss_pred             EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC-CCceEeecCCC----------------------------CC
Q psy9139          72 QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP-SKTIAASTKGE----------------------------DQ  122 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~-s~~~~~~t~~~----------------------------~~  122 (197)
                      ...........+.|.++.....+.|.|.+.|..|.... ...+.+...+.                            +.
T Consensus       333 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~  412 (642)
T 1e07_A          333 PRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQ  412 (642)
T ss_pred             CCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCe
Confidence            11222334567899999999999999999998875321 11122211110                            04


Q ss_pred             CCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         123 TDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       123 ~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ..|.........   ...+.|.++.+.....+++.|.|..|....+
T Consensus       413 i~W~~~g~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s  455 (642)
T 1e07_A          413 YSWLIDGNIQQH---TQELFISNITEKNSGLYTCQANNSASGHSRT  455 (642)
T ss_pred             EEEEECCEEcCC---CceEEEccCChhhCeEEEEEEEcCCCCCccc
Confidence            567665544333   5679999999999999999999999877644

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=98.58  E-value=7.6e-08  Score=58.73  Aligned_cols=46  Identities=22%  Similarity=0.193  Sum_probs=38.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+.++.+.+|
T Consensus        62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p  107 (108)
T 2dm4_A           62 SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKGSGPSS  107 (108)
T ss_dssp             SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSCSSCCC
T ss_pred             ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCCCCCCC
Confidence            4479999999999999999999999999987777777766666543

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.57  E-value=8.7e-08  Score=58.67  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=36.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAF  182 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~  182 (197)
                      ...++|.+|.|++.|.|+|+|.|..|.|+.+......+..+.+.+
T Consensus        64 ~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~P~~  108 (110)
T 2crz_A           64 EVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGPS  108 (110)
T ss_dssp             CSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSCCCC
T ss_pred             cEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCCCCC
Confidence            557999999999999999999999999998776666665544433

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.56  E-value=1.1e-07  Score=59.18  Aligned_cols=39  Identities=15%  Similarity=0.215  Sum_probs=32.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...|++.+|+|++.|.|+|+|.|..|.|+.+..+...+.
T Consensus        74 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~  112 (120)
T 2crm_A           74 TREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP  112 (120)
T ss_dssp             CSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcC
Confidence            567999999999999999999999999997665544443

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.55  E-value=2.1e-07  Score=57.73  Aligned_cols=41  Identities=29%  Similarity=0.448  Sum_probs=34.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|++.|.|+|+|+|.+|.|+.+..+...+...
T Consensus        73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~  113 (119)
T 2ee2_A           73 EYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKA  113 (119)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred             EeEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCC
Confidence            45799999999999999999999999999776666666543

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.55  E-value=2.4e-07  Score=57.11  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=35.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGG  179 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~  179 (197)
                      ...++|.+|+|++.|.|+|+|+|.+|.|+.+..+...|.++.
T Consensus        68 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~  109 (114)
T 1x4y_A           68 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARS  109 (114)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCC
T ss_pred             EeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence            457999999999999999999999999998777767666543

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=98.53  E-value=9.4e-07  Score=63.09  Aligned_cols=167  Identities=11%  Similarity=0.113  Sum_probs=95.2

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-----E
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-----Q   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-----~   72 (197)
                      +.|.|+|.|.|..|.. ...+.+.+..+|....  ..........+.|.|.....+..     .+.|.......     .
T Consensus        71 D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-----~v~W~~~~~~~~~~~~~  145 (291)
T 2wim_A           71 DAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAP-----AVSWLYHNEEVTTISDN  145 (291)
T ss_dssp             GCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCC-----EEEEECC----CBCCCS
T ss_pred             cCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCC-----EEEEEECCccccccCCc
Confidence            4799999999999975 4566777766664322  11122456678888875322211     24444211100     0


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc--eEeecCC-----------------------------CC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT--IAASTKG-----------------------------ED  121 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~--~~~~t~~-----------------------------~~  121 (197)
                      .... .....+.|.++.......|.|.+.+..+.......  +.+..++                             .+
T Consensus       146 ~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p  224 (291)
T 2wim_A          146 RFAM-LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP  224 (291)
T ss_dssp             SEEE-CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCC
T ss_pred             eEEE-ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCC
Confidence            0111 12345888899888888999998887643211111  1111100                             01


Q ss_pred             CCCeeecCCCCCcc------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEE
Q psy9139         122 QTDWINIPLSNLDE------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFAT  173 (197)
Q Consensus       122 ~~~w~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t  173 (197)
                      ...|..........      .....+.|.++.....-.+++.|.|..|....+..+..
T Consensus       225 ~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v  282 (291)
T 2wim_A          225 AISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV  282 (291)
T ss_dssp             EEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred             eEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence            45565543322110      12456899999998888999999999998776555433

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.53  E-value=1.1e-07  Score=58.03  Aligned_cols=44  Identities=20%  Similarity=0.365  Sum_probs=35.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...|++.+|+|++.|.|+|+|.|..|.|+++......+..+.+.
T Consensus        63 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~  106 (109)
T 1x5x_A           63 DLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGP  106 (109)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCCCC
Confidence            45799999999999999999999999998776665666544443

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.52  E-value=1e-07  Score=58.72  Aligned_cols=46  Identities=11%  Similarity=0.199  Sum_probs=38.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+..+.+.+|
T Consensus        69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p  114 (115)
T 1x5z_A           69 GTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSS  114 (115)
T ss_dssp             SSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCCCC
T ss_pred             CcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCCCC
Confidence            4579999999999999999999999999977777677766555544

>1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.52  E-value=4.2e-06  Score=49.80  Aligned_cols=84  Identities=18%  Similarity=0.237  Sum_probs=61.4

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-C----CCCcEEE--E-eCCcccEEEEC---------CC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-R----TEDWQSV--H-VDAEYREFTLT---------QL   88 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~----~~~~~~~--~-~~~~~~~~~i~---------~L   88 (197)
                      -|++|. +++. .....+.|+|++|....+.|.-|.+++.. .    ...|...  + ..+...++++.         ++
T Consensus         7 fPgAPs~ikIs-K~~dgahLsWePP~~~sG~I~EYSVYlAvrs~~~~~~~~qL~FvrVYcG~~~~C~V~~~~L~~ahid~   85 (123)
T 1wft_A            7 GPGAPSTVRIS-KNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY   85 (123)
T ss_dssp             CCCCCEEEEEE-ECSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred             CCCCCcceEEe-eCCCceEEeecCCCCCCcccEEEEEEEEecccccCCCcCeeeEEEEEecCCcceEecccchhhhhhcc
Confidence            478887 4444 56889999999998777789999999872 1    1223222  2 14556677776         67


Q ss_pred             CCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          89 KCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        89 ~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      .+...|.|||.|.|..|.+..+.
T Consensus        86 t~kpAiiFRIaArNeKGYGPaTq  108 (123)
T 1wft_A           86 TSRPAIVFRISAKNEKGYGPATQ  108 (123)
T ss_dssp             SSSCEEEEEEEEBSSSSBCCCEE
T ss_pred             CCCceEEEEEEeecCCCCCCccc
Confidence            77779999999999999998763

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=2.1e-07  Score=58.23  Aligned_cols=41  Identities=15%  Similarity=0.250  Sum_probs=36.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|.++
T Consensus        77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~  117 (123)
T 2edd_A           77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA  117 (123)
T ss_dssp             SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred             ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence            45799999999999999999999999999887777777665

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=98.51  E-value=6.1e-07  Score=63.90  Aligned_cols=104  Identities=13%  Similarity=0.153  Sum_probs=68.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----CCCcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----TEDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~~~~~~   73 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|....  ..........+.|.|.....+..     .+.|...     ......
T Consensus       166 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-----~v~W~~~~~~~~~~~~~~  240 (284)
T 2rik_A          166 DSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPF-----QVSWHKDKRELRSGKKYK  240 (284)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCC-----EEEEEETTEEECBTTTEE
T ss_pred             cCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCC-----EEEEEECCEECcCCCCEE
Confidence            47999999999999988888999988874322  11222456678888876332221     2444421     122222


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +........+.|.++.......|.|.|.|..|....
T Consensus       241 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  276 (284)
T 2rik_A          241 IMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTC  276 (284)
T ss_dssp             EEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             EEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeE
Confidence            222333457889999999999999999999986543

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.51  E-value=1.9e-07  Score=57.61  Aligned_cols=45  Identities=18%  Similarity=0.165  Sum_probs=37.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAF  182 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~  182 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|..+..+...|.++.+.+
T Consensus        70 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~p  114 (116)
T 1x5g_A           70 SHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGPS  114 (116)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCCC
T ss_pred             CceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCCC
Confidence            457999999999999999999999999997766666666655443

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=98.50  E-value=4.8e-07  Score=73.90  Aligned_cols=170  Identities=12%  Similarity=0.090  Sum_probs=104.6

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC------CC
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT------ED   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~------~~   70 (197)
                      +.|.|+|.|.|..|. ....+.+.+..+|....   ..........+.|.|..... ..+   ..+.|...+      ..
T Consensus       591 d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~-~~~---~~i~W~~~g~~l~~~~~  666 (816)
T 3dmk_A          591 DQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGG-DLP---LNIDWTLDGQAISEDLG  666 (816)
T ss_dssp             HCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCS-SSC---CEEEEEETTBCCCGGGT
T ss_pred             cCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCC-CCC---CEEEEEECCeEcCCCCC
Confidence            479999999999995 34566677776664321   11112346788999986431 112   134454221      12


Q ss_pred             cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC------C---------------------CCCC
Q psy9139          71 WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK------G---------------------EDQT  123 (197)
Q Consensus        71 ~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~------~---------------------~~~~  123 (197)
                      +...........+.|.++.....+.|+|.|.|..|....+..+.+..+      +                     .+..
T Consensus       667 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i  746 (816)
T 3dmk_A          667 ITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQV  746 (816)
T ss_dssp             CEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEE
T ss_pred             eeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeE
Confidence            222233445567999999999999999999999886543322222110      0                     1156


Q ss_pred             CeeecCCCCCc-------c----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         124 DWINIPLSNLD-------E----ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       124 ~w~~~~~~~~~-------~----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      .|.........       .    .....+.|.++.....-.+.+.|.|..|.+..+..+...
T Consensus       747 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~  808 (816)
T 3dmk_A          747 TWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISV  808 (816)
T ss_dssp             ECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEE
T ss_pred             EEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEe
Confidence            67664322110       0    113468899999988889999999999998866554433

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.50  E-value=2.1e-07  Score=57.92  Aligned_cols=40  Identities=20%  Similarity=0.314  Sum_probs=33.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...|+|.+|+|++.|.|+|+|.|.+|.|+.+..+...|..
T Consensus        74 ~t~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~  113 (120)
T 1wfu_A           74 ATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTR  113 (120)
T ss_dssp             CSEEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCC
Confidence            3469999999999999999999999999976666555543

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}

Probab=98.50  E-value=4.6e-06  Score=55.76  Aligned_cols=108  Identities=11%  Similarity=0.114  Sum_probs=66.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEE--EE-e--CCCCcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVS--YR-D--RTEDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~--~~-~--~~~~~~~   73 (197)
                      ++|.|+|.|.|. |.....+.+.+..+|....  ..........+.|.|.....+...+.+|+-.  .. .  .......
T Consensus        67 d~G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~  145 (190)
T 2wv3_A           67 DSGEYHCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFF  145 (190)
T ss_dssp             GCEEEEEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEE
T ss_pred             cCEEEEEEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEE
Confidence            579999999999 8888888888888764321  1122345677888888632222223333210  00 0  0111122


Q ss_pred             EEeCCcccEEEECCCC-CCCEEEEEEEEEcCCcCCCC
Q psy9139          74 VHVDAEYREFTLTQLK-CGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +........+.|.++. ......|.|.|.|..|....
T Consensus       146 ~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~  182 (190)
T 2wv3_A          146 IINKENYTELNIVNLQITEDPGEYECNATNSIGSASV  182 (190)
T ss_dssp             EEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEE
T ss_pred             EecCCCeeEEEEEeccccCCCEEEEEEEEecCCccee
Confidence            2223334578999999 78899999999999886543

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.48  E-value=1.5e-07  Score=58.55  Aligned_cols=44  Identities=18%  Similarity=0.296  Sum_probs=37.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+..+...|.++.|.
T Consensus        77 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  120 (122)
T 1va9_A           77 SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS  120 (122)
T ss_dssp             EEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCC
T ss_pred             eeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCC
Confidence            56899999999999999999999999999777666666655544

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=98.48  E-value=2.4e-06  Score=60.88  Aligned_cols=168  Identities=10%  Similarity=-0.030  Sum_probs=93.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCcc-ccEEEEEEEe-CCCCcEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAI-ITHYIVSYRD-RTEDWQSVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~-i~~y~v~~~~-~~~~~~~~~   75 (197)
                      ++|.|+|.|.|..|..+..+.+.+..+|.+..   ..........+.|.|......... +.+|...-.. ........ 
T Consensus        62 d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~-  140 (289)
T 3ejj_X           62 NTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFF-  140 (289)
T ss_dssp             GCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEE-
T ss_pred             cCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEE-
Confidence            57999999999999888888999988876532   122334567788988874311111 3332111011 11111111 


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEE-cCCcCCCCCCceEeecC--CCC------------------------------C
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLV-NSIGESKPSKTIAASTK--GED------------------------------Q  122 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~-~~~g~~~~s~~~~~~t~--~~~------------------------------~  122 (197)
                       . ....+.|.++.......|.|.+. +..+.......+.+...  ..+                              .
T Consensus       141 -~-~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~  218 (289)
T 3ejj_X          141 -S-PWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFN  218 (289)
T ss_dssp             -E-TTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCE
T ss_pred             -C-CCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceE
Confidence             1 22458899998888889999988 43332222112222110  011                              3


Q ss_pred             CCeeecCCCCCcc----------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         123 TDWINIPLSNLDE----------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       123 ~~w~~~~~~~~~~----------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ..|..........          .....+.|.++.....-.+.+.|.|..|....+..+
T Consensus       219 i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L  277 (289)
T 3ejj_X          219 VILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNF  277 (289)
T ss_dssp             EEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEE
T ss_pred             EEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEE
Confidence            4565543322110          114568899999988999999999999987765443

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=98.45  E-value=3.1e-07  Score=57.36  Aligned_cols=38  Identities=24%  Similarity=0.231  Sum_probs=32.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+......+
T Consensus        66 ~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t  103 (122)
T 2e3v_A           66 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT  103 (122)
T ss_dssp             TTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred             cceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccc
Confidence            55799999999999999999999999999765554433

>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A

Probab=98.45  E-value=6.3e-06  Score=55.57  Aligned_cols=109  Identities=12%  Similarity=0.106  Sum_probs=67.7

Q ss_pred             CCeeEEEEEEeCC-C--CceeEEEEEecCCCCCCEEEEE----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE-
Q psy9139           1 MVGNYTCLADNIF-G--KDDIYYQVTILSPPGVPNILLQ----STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~-G--~~~~~~~~~~~~~P~~p~~~~~----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~-   72 (197)
                      ++|.|+|.|.|.. |  ..+..+.+.+...+.+|.+...    ......+.|.|.....  .+    .+.|........ 
T Consensus        69 D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~--~~----~v~W~k~g~~~~~  142 (198)
T 1ugn_A           69 HTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVA--FD----GFILCKEGEDEHP  142 (198)
T ss_dssp             GCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSC--CS----EEEEEEC------
T ss_pred             HCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCC--Cc----EEEEEECCCccCC
Confidence            5799999999988 6  3456778888876666653322    2346788999987432  11    244442221110 


Q ss_pred             -EEE--e---CCcccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEe
Q psy9139          73 -SVH--V---DAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAA  115 (197)
Q Consensus        73 -~~~--~---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~  115 (197)
                       ...  .   ......+.|.++.......|.|.|.|..+.   +..+..+.+
T Consensus       143 ~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l  194 (198)
T 1ugn_A          143 QCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLEL  194 (198)
T ss_dssp             CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEE
T ss_pred             ccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEE
Confidence             011  1   123467999999999999999999998753   344544443

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=98.44  E-value=4.4e-05  Score=59.95  Aligned_cols=165  Identities=13%  Similarity=0.054  Sum_probs=93.9

Q ss_pred             CCeeEEEEEEeCCCCce----eEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCC---
Q psy9139           1 MVGNYTCLADNIFGKDD----IYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TED---   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~----~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~---   70 (197)
                      +.|.|+|.|.|..+...    ..+.+.+..+|..+.  ..........+.|.|.....+...+ .|-+.|... ++.   
T Consensus       301 d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i-~~w~~W~~~~~g~~~~  379 (585)
T 2ocw_A          301 DAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSI-KYWCLWEGAQNGRCPL  379 (585)
T ss_pred             hCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccE-EEEEEEEccCCCCCce
Confidence            57999999999643332    677888887765443  2222345667888887643222222 232344320 111   


Q ss_pred             --------------cEEEEe--CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCCC----C---------
Q psy9139          71 --------------WQSVHV--DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE----D---------  121 (197)
Q Consensus        71 --------------~~~~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~~----~---------  121 (197)
                                    ...+..  ......+.|.++.......|.|.| |..|.......+.+...+.    +         
T Consensus       380 l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~  458 (585)
T 2ocw_A          380 LVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGE  458 (585)
T ss_pred             eeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCC
Confidence                          011110  111224888899998888999988 7776543322232221100    0         


Q ss_pred             ------------------CCCeeecCCCCCcc---------------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         122 ------------------QTDWINIPLSNLDE---------------ALEMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       122 ------------------~~~w~~~~~~~~~~---------------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                                        ...|..........               .....+.|.++.....-.+.+.|.|..|.+..
T Consensus       459 ~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  537 (585)
T 2ocw_A          459 TLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGET  537 (585)
T ss_pred             cEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEE
Confidence                              23565544322110               01247889999998888999999999997764

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.44  E-value=2.5e-07  Score=56.15  Aligned_cols=43  Identities=19%  Similarity=0.213  Sum_probs=36.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGK  180 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~  180 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|.++.+
T Consensus        60 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P  102 (106)
T 2ed8_A           60 GLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSG  102 (106)
T ss_dssp             SSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCCC
Confidence            3479999999999999999999999999977777677766553

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.44  E-value=5.8e-07  Score=55.24  Aligned_cols=38  Identities=24%  Similarity=0.356  Sum_probs=31.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS-TNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~~t~~  175 (197)
                      ...|++.+|+|++.|.|+|+|.|..|. |+++......+
T Consensus        67 ~~~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t  105 (112)
T 1bpv_A           67 ENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAIT  105 (112)
T ss_dssp             SSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEE
Confidence            567999999999999999999999997 98765544443

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.44  E-value=1.7e-07  Score=57.78  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=35.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|+|.|.|+|+|+|..|.|+.+..+...|.+.
T Consensus        67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~  107 (113)
T 1x5j_A           67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL  107 (113)
T ss_dssp             SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred             cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence            55799999999999999999999999999777666666654

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.44  E-value=5.1e-07  Score=55.00  Aligned_cols=38  Identities=13%  Similarity=0.141  Sum_probs=32.8

Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         141 LVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       141 ~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ++|.+|+|++.|.|+|+|.|.+|.|+.+..+...+..+
T Consensus        64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~  101 (107)
T 1x5a_A           64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP  101 (107)
T ss_dssp             EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred             EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCC
Confidence            99999999999999999999999999776665665543

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.43  E-value=2.9e-07  Score=55.88  Aligned_cols=45  Identities=18%  Similarity=0.155  Sum_probs=35.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAFH  183 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~p  183 (197)
                      ...|+|.+|+|++.|.|+|+|+|..|.|+.+.. ...+.++.+.+|
T Consensus        61 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~~P~~p  105 (107)
T 2dn7_A           61 DQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEK-EIRTPEDLSGPS  105 (107)
T ss_dssp             CCEEEEECCCTTCEEEEEEEEEETTEEEEEEEE-EEECCCCCCCCC
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEcCCcccCCeee-EEeCCCCCCCCC
Confidence            457999999999999999999999999997663 355555555443

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.43  E-value=3.9e-07  Score=55.64  Aligned_cols=40  Identities=15%  Similarity=0.135  Sum_probs=33.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+..+...|..
T Consensus        63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  102 (109)
T 2e7h_A           63 ENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQL  102 (109)
T ss_dssp             SSEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCC
T ss_pred             CCEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCC
Confidence            4579999999999999999999999999977666555543

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.43  E-value=3.1e-07  Score=57.43  Aligned_cols=44  Identities=16%  Similarity=0.175  Sum_probs=37.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+..+...|.++.|.
T Consensus        79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  122 (125)
T 1uen_A           79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             ccEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCC
Confidence            55799999999999999999999999998777666666665544

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4

Probab=98.42  E-value=1.8e-06  Score=58.54  Aligned_cols=107  Identities=17%  Similarity=0.204  Sum_probs=69.6

Q ss_pred             CCeeEEEEEEeCCC--CceeEEEEEecCCCCCCEEE--EEeecCCeEEEEeee-CCCCCccccEEEEEEEeCCC-CcE--
Q psy9139           1 MVGNYTCLADNIFG--KDDIYYQVTILSPPGVPNIL--LQSTTTHSISILWKP-SYDGGAIITHYIVSYRDRTE-DWQ--   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G--~~~~~~~~~~~~~P~~p~~~--~~~~~~~~~~l~W~~-~~~~~~~i~~y~v~~~~~~~-~~~--   72 (197)
                      ++|.|+|.|.|..|  ..+..+.+.+..+|..+...  ........+.|.|.. ...+..     .+.|..... ...  
T Consensus        76 D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-----~i~W~~~~~~~l~~~  150 (212)
T 1f97_A           76 DNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPS-----EYSWFKDGISMLTAD  150 (212)
T ss_dssp             GCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCC-----EEEEEETTEESBC--
T ss_pred             cCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCC-----EEEEEeCCccccccc
Confidence            57999999999988  45667788888888777522  222446778899983 222211     244442221 111  


Q ss_pred             ----------EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc
Q psy9139          73 ----------SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        73 ----------~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~  112 (197)
                                ..........+.|.++.......|.|.|.|..|....+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~  200 (212)
T 1f97_A          151 AKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEA  200 (212)
T ss_dssp             ---CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCC
T ss_pred             ccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccce
Confidence                      0112344567899999999999999999999987633333

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=98.41  E-value=5.9e-06  Score=56.40  Aligned_cols=88  Identities=14%  Similarity=0.109  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..+.||.+.+. ....+|.|.|.++    ..+..|.|.|...  ........+....+.+.|.+|.|++.|.|+|+|...
T Consensus       108 t~i~PP~v~v~-~~~~~i~V~~~~p----~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~  182 (206)
T 4doh_B          108 TILTRPGMEIT-KDGFHLVIELEDL----GPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVK  182 (206)
T ss_dssp             CBCCCCCEEEE-EETTEEEEEECCC----CTTCEEEEEEEESSSSCCCEEEEECCSSSEEEEEECCSSSCEEEEEEEEEG
T ss_pred             cccCCCeEEEE-eCCCEEEEEecCC----CCcEEEEEEEEEcCCCceeEEeEEccCCeEEEEeCCCCCCcEEEEEEEEec
Confidence            45677876555 5788999999875    3567899988732  222221223344578999999999999999999875


Q ss_pred             C--cCCCCCCceEeecC
Q psy9139         104 I--GESKPSKTIAASTK  118 (197)
Q Consensus       104 ~--g~~~~s~~~~~~t~  118 (197)
                      .  +.+.+|....+.|.
T Consensus       183 ~~~~~g~~S~~~C~~t~  199 (206)
T 4doh_B          183 AIGRYSAFSQTECVEVQ  199 (206)
T ss_dssp             GGTEECCCCCCEEECC-
T ss_pred             CCCCCCCCCCCEeEEcc
Confidence            3  67888887777664

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.41  E-value=3.3e-07  Score=56.14  Aligned_cols=39  Identities=15%  Similarity=0.187  Sum_probs=33.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|.
T Consensus        64 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~  102 (110)
T 2db8_A           64 ETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTS  102 (110)
T ss_dssp             CSCEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcC
Confidence            457999999999999999999999999997766655443

>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*

Probab=98.40  E-value=1.9e-07  Score=63.71  Aligned_cols=103  Identities=12%  Similarity=-0.040  Sum_probs=60.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EE-EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-------
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-IL-LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-------   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~-~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-------   71 (197)
                      ++|.|+|.|.|..|.....+.+.+..||.... .. ........+.|.|...-.+..     .|.|...++..       
T Consensus        80 D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P-----~v~W~~~~~~~~~~~~~~  154 (203)
T 4fa8_A           80 HDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHP-----HVQWLMPEGVEPAPTAAN  154 (203)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCC-----EEEECCC-----------
T ss_pred             HCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCC-----EEEEEECCeeecCccccc
Confidence            57999999999999888888888876553322 11 111335678888876322111     24453211100       


Q ss_pred             EEEEeC--CcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          72 QSVHVD--AEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        72 ~~~~~~--~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ..+...  +.-....+.++.+.....|.|.|.|..|..+
T Consensus       155 ~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~  193 (203)
T 4fa8_A          155 GGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH  193 (203)
T ss_dssp             -CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred             ceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence            001111  2222334456777778889999999998654

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X

Probab=98.40  E-value=9.6e-07  Score=59.98  Aligned_cols=104  Identities=11%  Similarity=0.185  Sum_probs=70.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEE--EEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEE--EE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNIL--LQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQS--VH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~--~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~--~~   75 (197)
                      ++|.|+|.|.|..|..+..+.+.+..+|..+...  ........+.|.|....  +.+..  .+.|... .+....  ..
T Consensus        95 D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~--g~p~~--~v~W~~~~~~~~~~~~~~  170 (214)
T 3jz7_A           95 DIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKE--GSLPL--QFEWQKLSDSQTMPTPWL  170 (214)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSB--CCSSC--EEEEEECSTTCCCCGGGG
T ss_pred             hCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCC--CCCCC--EEEEEECCCCCccCccce
Confidence            4799999999999988889999999998887622  22344677899998732  11211  3455432 111000  01


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .......+.|.++.......|.|.|.|..|...
T Consensus       171 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~  203 (214)
T 3jz7_A          171 AEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQ  203 (214)
T ss_dssp             GGTTSSEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred             eccCCCEEEEecCCHHHCEEEEEEEEcCCCcEE
Confidence            122345899999999999999999999987653

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=98.39  E-value=2e-06  Score=70.22  Aligned_cols=161  Identities=14%  Similarity=0.102  Sum_probs=99.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQSV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~~~   74 (197)
                      +.|.|+|.|.|..|....++.+.+..+|.... ..........+.|.|.....   +.  -.+.|....     ..... 
T Consensus       501 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~---p~--~~i~W~k~~~~l~~~~~~~-  574 (816)
T 3dmk_A          501 DGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGY---PI--DSIVWERDNRALPINRKQK-  574 (816)
T ss_dssp             TCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECS---SE--EEEEEEETTEESCCSTTEE-
T ss_pred             CCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCC---CC--CEEEEEECCeEcccCCceE-
Confidence            57999999999999988899999988773221 11222456778888876332   21  245554221     11111 


Q ss_pred             EeCCcccEEEECCCC-CCCEEEEEEEEEcCCcCCCC-CCceEeecCCC----------------------------C-CC
Q psy9139          75 HVDAEYREFTLTQLK-CGTHYKINIKLVNSIGESKP-SKTIAASTKGE----------------------------D-QT  123 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~-s~~~~~~t~~~----------------------------~-~~  123 (197)
                       . .....+.|.++. ....+.|+|.|.|..|.... ...+.+...+.                            + ..
T Consensus       575 -~-~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i  652 (816)
T 3dmk_A          575 -V-FPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNI  652 (816)
T ss_dssp             -E-CTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEE
T ss_pred             -E-ecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEE
Confidence             1 123468888887 56788999999998875321 11111111100                            0 35


Q ss_pred             CeeecCCCCCcc---------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         124 DWINIPLSNLDE---------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       124 ~w~~~~~~~~~~---------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .|..........         .....+.|.++.......+++.|.|..|....+.
T Consensus       653 ~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~  707 (816)
T 3dmk_A          653 DWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTT  707 (816)
T ss_dssp             EEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred             EEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEE
Confidence            576654333210         1235689999999999999999999998765433

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=98.39  E-value=3.6e-07  Score=55.45  Aligned_cols=38  Identities=24%  Similarity=0.231  Sum_probs=32.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+......|
T Consensus        65 ~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T  102 (105)
T 2haz_A           65 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT  102 (105)
T ss_dssp             HSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEE
Confidence            56899999999999999999999999999766554444

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.39  E-value=4.8e-07  Score=56.02  Aligned_cols=42  Identities=19%  Similarity=0.307  Sum_probs=35.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGG  179 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~  179 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+..+.
T Consensus        73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  114 (119)
T 2ed7_A           73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES  114 (119)
T ss_dssp             CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred             ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence            557999999999999999999999999997776666655433

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=98.39  E-value=5e-07  Score=60.57  Aligned_cols=103  Identities=11%  Similarity=0.135  Sum_probs=65.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEE-----EEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----CCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNIL-----LQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----TED   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~~~   70 (197)
                      ++|.|+|.|.|..|.....+.+.+...+.+|.+.     ........+.|.|.....+..     .+.|...     ...
T Consensus        74 d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~v~W~~~~~~~~~~~  148 (194)
T 2a38_A           74 NSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTP-----VVKFYRDGAEIQSSL  148 (194)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCC-----EEEEEETTEECCCSS
T ss_pred             cCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCC-----eEEEEECCEECCCCC
Confidence            5799999999999988888888888766555422     122345567888876321111     1344311     111


Q ss_pred             cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          71 WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        71 ~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ............+.|.++.+.....|.|.+.|..|...
T Consensus       149 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~  186 (194)
T 2a38_A          149 DFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRAT  186 (194)
T ss_dssp             SEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEE
T ss_pred             cEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceE
Confidence            12222233344688888888888999999999988643

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.39  E-value=5.9e-07  Score=54.89  Aligned_cols=33  Identities=21%  Similarity=0.354  Sum_probs=29.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...|++.+|.+++.|.|+|+|.|.+|.|+++..
T Consensus        64 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~   96 (110)
T 2yuw_A           64 KTKFTITGLPTDAKIFVRVKAVNAAGASEPKYY   96 (110)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEcCCcCCCCcCC
Confidence            568999999999999999999999999986543

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.39  E-value=8.4e-07  Score=54.48  Aligned_cols=40  Identities=20%  Similarity=0.174  Sum_probs=34.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+..
T Consensus        68 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  107 (114)
T 2ede_A           68 RLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLK  107 (114)
T ss_dssp             CCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             ceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecC
Confidence            5579999999999999999999999999977666555543

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.37  E-value=4.9e-07  Score=55.02  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=34.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+..+...|..+
T Consensus        62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~  102 (108)
T 2djs_A           62 TNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD  102 (108)
T ss_dssp             SSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCS
T ss_pred             ccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCC
Confidence            45799999999999999999999999999776665665543

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.37  E-value=6.4e-07  Score=56.02  Aligned_cols=42  Identities=10%  Similarity=-0.035  Sum_probs=36.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGG  179 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~  179 (197)
                      ...++|.+|.|++.|.|+|+|+|.+|.|+.+..+...+.++.
T Consensus        78 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~  119 (124)
T 2dbj_A           78 GSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS  119 (124)
T ss_dssp             TSCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred             cceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence            457999999999999999999999999998877767766543

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.35  E-value=6e-07  Score=55.66  Aligned_cols=40  Identities=33%  Similarity=0.464  Sum_probs=34.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...+..
T Consensus        74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  113 (120)
T 1x5f_A           74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP  113 (120)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred             ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCC
Confidence            5679999999999999999999999998877666555544

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.34  E-value=4.5e-07  Score=57.26  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=34.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|.++
T Consensus        76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~  116 (132)
T 1x5h_A           76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES  116 (132)
T ss_dssp             CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence            56899999999999999999999999998776665666553

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=6.7e-07  Score=55.30  Aligned_cols=32  Identities=25%  Similarity=0.501  Sum_probs=29.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+.
T Consensus        72 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~  103 (118)
T 2yrz_A           72 QTSVVVEDLLPNHSYVFRVRAQSQEGWGRERE  103 (118)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEESSCEEEEEE
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence            56799999999999999999999999998765

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=98.33  E-value=3.9e-07  Score=66.51  Aligned_cols=167  Identities=12%  Similarity=0.158  Sum_probs=74.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCC-------------------CCE---------EEEEeecCCeEEEEeeeCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPG-------------------VPN---------ILLQSTTTHSISILWKPSYD   52 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~-------------------~p~---------~~~~~~~~~~~~l~W~~~~~   52 (197)
                      ++|.|+|.|.|. |.....+.+.+...|.                   +|.         ..........+.|.|.....
T Consensus        72 D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~  150 (334)
T 1ry7_B           72 DSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGN  150 (334)
T ss_dssp             ------------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCS
T ss_pred             cCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCC
Confidence            579999999999 8777777776665432                   221         01222346678888875322


Q ss_pred             CCccccEEEEEEEeCCCC------cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecCC-------
Q psy9139          53 GGAIITHYIVSYRDRTED------WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG-------  119 (197)
Q Consensus        53 ~~~~i~~y~v~~~~~~~~------~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~~-------  119 (197)
                      +.   .  .+.|......      ............+.|.++.......|.|.+.|..|.......+.+....       
T Consensus       151 p~---~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~  225 (334)
T 1ry7_B          151 PT---P--SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQ  225 (334)
T ss_dssp             SC---C--EEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCC
T ss_pred             CC---C--eEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceE
Confidence            11   1  3455422111      0011122345578999998888888899998877653222112211100       


Q ss_pred             -------------------------CCCCCeeec----CCCCCcc-----------------cccceEEEcCCCCCCeEE
Q psy9139         120 -------------------------EDQTDWINI----PLSNLDE-----------------ALEMPLVIENLLPATRYE  153 (197)
Q Consensus       120 -------------------------~~~~~w~~~----~~~~~~~-----------------~~~~~~~i~~L~p~t~Y~  153 (197)
                                               .+...|...    .......                 .....+.|.++.....-.
T Consensus       226 ~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~  305 (334)
T 1ry7_B          226 AGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGE  305 (334)
T ss_dssp             TTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSE
T ss_pred             ecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEE
Confidence                                     004667662    1111000                 001268999999988889


Q ss_pred             EEEEEEcCCCCCCcceEEEE
Q psy9139         154 LTISAKNDAGSTNKNYVFAT  173 (197)
Q Consensus       154 v~V~a~n~~G~~~~~~~~~t  173 (197)
                      +++.|.|..|....+..+..
T Consensus       306 Y~C~a~N~~G~~~~~~~l~V  325 (334)
T 1ry7_B          306 YTCLAGNSIGFSHHSAWLVV  325 (334)
T ss_dssp             EEEEEEESSCCEEEEEEEEE
T ss_pred             EEEEEeCCCCeEEEEEEEEE
Confidence            99999999998766554433

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.33  E-value=5.8e-07  Score=55.02  Aligned_cols=32  Identities=16%  Similarity=0.227  Sum_probs=29.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|++.+|.+++.|.|+|+|.|.+|.|+++.
T Consensus        65 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~   96 (111)
T 1x5y_A           65 RCGFTVKDLPTGARILFRVVGVNIAGRSEPAT   96 (111)
T ss_dssp             SSEEEEECCCTTCCEEEEEEEEETTEECCCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcc
Confidence            56799999999999999999999999988654

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=98.31  E-value=1.3e-06  Score=63.00  Aligned_cols=163  Identities=15%  Similarity=0.132  Sum_probs=92.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC----CCCEEEE-----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP----GVPNILL-----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P----~~p~~~~-----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-   70 (197)
                      ++|.|+|.|.|..|..+..+.+.+...+    ..|.+..     .......+.|.|.....+..     .+.|...... 
T Consensus        75 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~-----~v~W~k~~~~~  149 (304)
T 2yd9_A           75 DENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDP-----EITWFKDFLPV  149 (304)
T ss_dssp             TCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCC-----EEEEEETTEEC
T ss_pred             CCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCC-----eEEEEECCEEC
Confidence            4799999999999988888888887653    2344221     12335678888876322221     2444321100 


Q ss_pred             -----cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC-CceEeec---------CCC---------------
Q psy9139          71 -----WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS-KTIAAST---------KGE---------------  120 (197)
Q Consensus        71 -----~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s-~~~~~~t---------~~~---------------  120 (197)
                           ..... ......+.|.++.......|.|.+.|..|..... ..+.+..         .+.               
T Consensus       150 ~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~  228 (304)
T 2yd9_A          150 DPSASNGRIK-QLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCV  228 (304)
T ss_dssp             CGGGGTTSEE-ECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEE
T ss_pred             cCCCCcceEE-eCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEE
Confidence                 00111 1123368999999999999999999988754322 1222211         000               


Q ss_pred             ------CCCCeeecCCCCCcc----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         121 ------DQTDWINIPLSNLDE----ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       121 ------~~~~w~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                            +...|..........    .....+.+.+++.  .-.+++.|.|..|....+..+
T Consensus       229 ~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~d--~G~Y~C~a~N~~G~~~~~~~l  287 (304)
T 2yd9_A          229 AVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDVKD--SANYTCVAMSSLGVIEAVAQI  287 (304)
T ss_dssp             EEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSCCS--CEEEEEEEEETTEEEEEEEEE
T ss_pred             EeeeCCCEEEEEECCEECCCcccccCCcEEEEEccccc--CEEEEEEEEeCCCcEEEEEEE
Confidence                  045676544322211    1123466666653  457789999998876554433

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=98.30  E-value=6.4e-05  Score=51.82  Aligned_cols=93  Identities=20%  Similarity=0.185  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEEeecCCeEEEEeeeCCCC----Cc---------cccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCC
Q psy9139          25 LSPPGVPNILLQSTTTHSISILWKPSYDG----GA---------IITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCG   91 (197)
Q Consensus        25 ~~~P~~p~~~~~~~~~~~~~l~W~~~~~~----~~---------~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   91 (197)
                      ....+||.+.+. ...++|.|.|.+|...    ++         +...|.|.|........... ......+.|.+|+|+
T Consensus       106 ~t~igPP~v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~~~-~~~~~~~~l~~L~p~  183 (221)
T 4doh_R          106 ETQIGPPEVALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQ-CVTNHTLVLTWLEPN  183 (221)
T ss_dssp             HCBCCCCEEEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEEEE-EECSSEEEECSCCTT
T ss_pred             hCccCCCEEEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEEEE-eecCcEEEEecCCCC
Confidence            356788886655 5778999999987521    11         03579999875433322111 223467899999999


Q ss_pred             CEEEEEEEEEcC--CcCCCCCCceEeecCC
Q psy9139          92 THYKINIKLVNS--IGESKPSKTIAASTKG  119 (197)
Q Consensus        92 ~~y~~~v~a~~~--~g~~~~s~~~~~~t~~  119 (197)
                      +.|.++|+|...  .|.+.+|....+.|..
T Consensus       184 t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~  213 (221)
T 4doh_R          184 TLYCVHVESFVPGPPRRAQPSEKQCARTLK  213 (221)
T ss_dssp             CEEEEEEEEECSSSCCCCCCCEEEEEECCC
T ss_pred             CcEEEEEEEEEcCCCCCCCCCCCEeEecCC
Confidence            999999999864  5778888888887754

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.30  E-value=8.9e-07  Score=54.72  Aligned_cols=44  Identities=20%  Similarity=0.206  Sum_probs=33.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAF  182 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~  182 (197)
                      ...|+|.+|+|++.|.|+|+|+|.+|.|+++.. ...|..+.+.+
T Consensus        70 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~-~~~T~~~~P~p  113 (116)
T 2edb_A           70 QRYYSIERLESSSHYVISLKAFNNAGEGVPLYE-SATTRSITSGP  113 (116)
T ss_dssp             CCEEEECSCCSSSBEEEEEEEEETTEECSCEEE-CCBCCCSSSCS
T ss_pred             eeEEEeCCCCCCCEEEEEEEEEeCCccCCCCcc-eeecccCCCCC
Confidence            457999999999999999999999999986543 23444444433

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=98.29  E-value=9.9e-06  Score=53.75  Aligned_cols=106  Identities=12%  Similarity=0.066  Sum_probs=64.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCC-CccccEEEE----EEEeCCC--Cc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDG-GAIITHYIV----SYRDRTE--DW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~-~~~i~~y~v----~~~~~~~--~~   71 (197)
                      +.|.|+|.|.|   .....+.+.+..+|....  ..........+.|.|.....+ ...+.+|+.    .......  ..
T Consensus        60 d~G~Y~C~~~n---~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~  136 (184)
T 3b5h_A           60 QWGEYSCVFLP---EPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESR  136 (184)
T ss_dssp             CCEEEEEEEES---TTSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGT
T ss_pred             hCeEEEEEEEC---CcCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCE
Confidence            57999999999   334677888887775443  122334567888998764322 122333320    0000000  11


Q ss_pred             EEEEeCCcccEEEECCCC-CCCEEEEEEEEEcCCcCCCC
Q psy9139          72 QSVHVDAEYREFTLTQLK-CGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ..+........+.|.++. +.....|.|.|.|..|....
T Consensus       137 ~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~  175 (184)
T 3b5h_A          137 FFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQA  175 (184)
T ss_dssp             EEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEE
T ss_pred             EEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceE
Confidence            122222334579999999 88899999999999986543

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.29  E-value=9.8e-07  Score=53.89  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=34.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...++|.+|.|++.|.|+|+|.|..|.|+.+..+...+..
T Consensus        65 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  104 (111)
T 1x5l_A           65 TTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK  104 (111)
T ss_dssp             SSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCC
T ss_pred             CCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCC
Confidence            4579999999999999999999999999977666555543

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=98.29  E-value=1.3e-06  Score=62.95  Aligned_cols=165  Identities=13%  Similarity=0.152  Sum_probs=85.6

Q ss_pred             CCeeEEEEEEeC-CCCceeEEEEEecCCCCCCEEE----EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE--E
Q psy9139           1 MVGNYTCLADNI-FGKDDIYYQVTILSPPGVPNIL----LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ--S   73 (197)
Q Consensus         1 ~~g~y~c~a~n~-~G~~~~~~~~~~~~~P~~p~~~----~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~--~   73 (197)
                      ++|.|+|.|.|. .|..+..+.+.+...|..+.+.    ........+.|.|....  +.|.  -.+.|........  .
T Consensus        85 D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~--g~P~--~~i~W~~~~~~~~~~~  160 (308)
T 4fom_A           85 DSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAAT--GKPV--AHIDWEGDLGEMESTT  160 (308)
T ss_dssp             GCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEE--EBSC--CEEEECCCSSBCCEEE
T ss_pred             HCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecC--CcCC--ceEEEEECCccccccc
Confidence            479999999987 4566667777776665443211    11123455666664321  1111  1244432211111  1


Q ss_pred             EEeCC----cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee--------cCCC---------------------
Q psy9139          74 VHVDA----EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS--------TKGE---------------------  120 (197)
Q Consensus        74 ~~~~~----~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~--------t~~~---------------------  120 (197)
                      .....    ....+.|..........|.|.+.|..|.......+.+.        ....                     
T Consensus       161 ~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P  240 (308)
T 4fom_A          161 TSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANP  240 (308)
T ss_dssp             EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEES
T ss_pred             ceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCC
Confidence            11111    12246777766666677788888876654322111110        0000                     


Q ss_pred             -C-CCCeeecCCCCCcc---cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         121 -D-QTDWINIPLSNLDE---ALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       121 -~-~~~w~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                       + ...|.+........   .+...+.|..+.....-.+++.|.|..|....+.
T Consensus       241 ~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~  294 (308)
T 4fom_A          241 PPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQK  294 (308)
T ss_dssp             CEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEE
Confidence             0 35576544332211   1233455778888777788999999999765443

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.29  E-value=1e-06  Score=54.65  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=29.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...+++.+|.|++.|.|+|+|.|..|.|+++..
T Consensus        75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~  107 (121)
T 1wf5_A           75 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKD  107 (121)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEESSCEEEECCC
T ss_pred             ccEEEECCcCCCCEEEEEEEEEcCCccCCCcCC
Confidence            567999999999999999999999999886543

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=98.29  E-value=9.8e-07  Score=53.23  Aligned_cols=37  Identities=22%  Similarity=0.346  Sum_probs=31.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      ...+.|.+|+|++.|.|+|+|+|.+|.|+.+..+...
T Consensus        64 ~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~  100 (102)
T 3n1f_C           64 KQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICE  100 (102)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEE
T ss_pred             ceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEee
Confidence            4468999999999999999999999999976655443

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=98.28  E-value=1.9e-05  Score=53.70  Aligned_cols=103  Identities=17%  Similarity=0.194  Sum_probs=66.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCC----CCCCEEEE-----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCC---
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSP----PGVPNILL-----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRT---   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~----P~~p~~~~-----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~---   68 (197)
                      ++|.|+|.|.|..|.....+.+.+...    |..|.+..     .......+.|.|.....+..     .+.|....   
T Consensus        75 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-----~v~W~~~g~~l  149 (212)
T 2yd6_A           75 DEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP-----EITWFKDFLPV  149 (212)
T ss_dssp             TCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC-----EEEEEETTEEC
T ss_pred             CCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC-----eEEEEECCccc
Confidence            579999999999998888888888654    34454221     12335678888887322221     24443211   


Q ss_pred             -----CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          69 -----EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        69 -----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                           ..............+.|.++.......|.|.|.|..|...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~  194 (212)
T 2yd6_A          150 DTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY  194 (212)
T ss_dssp             ------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             cCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence                 0111111223456789999999999999999999998754

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=98.27  E-value=3.3e-05  Score=54.07  Aligned_cols=104  Identities=9%  Similarity=-0.009  Sum_probs=70.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV   76 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~   76 (197)
                      +.|.|+|.|.|..|..+..+.+.+..++.+|.+....    .....+.|.|.....+..+...+.+.|......   +..
T Consensus       142 d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~---~~~  218 (262)
T 3rjd_A          142 HNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKT---LRG  218 (262)
T ss_dssp             GCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEE---EEE
T ss_pred             hCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcE---ecc
Confidence            4799999999999888888888888876666644332    346778899987443221222344555433221   111


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ......+.|.++.......|.|.|.|..|..
T Consensus       219 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~  249 (262)
T 3rjd_A          219 RNTSSEYQILTARREDSGLYWCEAATEDGNV  249 (262)
T ss_dssp             EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred             cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence            2344578899999999999999999999863

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=98.27  E-value=1.3e-06  Score=53.68  Aligned_cols=32  Identities=25%  Similarity=0.375  Sum_probs=29.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|+|++.|+|+|.|.|.+|.|.++.
T Consensus        63 ~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~   94 (114)
T 2kbg_A           63 KDHIILEHLQWTMGYEVQITAANRLGYSEPTV   94 (114)
T ss_dssp             TCCEEECCCCTTCCEEEEEEEECTTSCEEEEE
T ss_pred             cCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcC
Confidence            45799999999999999999999999999765

>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}

Probab=98.26  E-value=4.4e-05  Score=51.27  Aligned_cols=109  Identities=12%  Similarity=0.174  Sum_probs=68.7

Q ss_pred             CCeeEEEEEEeCCC--CceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC----
Q psy9139           1 MVGNYTCLADNIFG--KDDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTED----   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G--~~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~----   70 (197)
                      ++|.|+|.|.|..|  ..+..+.+.+...+.+|.+....    .....+.|.|....   .+   -.+.|......    
T Consensus        69 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~---~~---~~~~w~k~g~~~~~~  142 (196)
T 3p2t_A           69 YAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRS---PM---DTFLLCKERAAHPLL  142 (196)
T ss_dssp             GCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEE---EE---EEEEEEETTCCCGGG
T ss_pred             cCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCC---CC---CEEEEEeCCCcccce
Confidence            57999999999998  34566778887776667643322    34667888887632   11   12444422211    


Q ss_pred             -cE-EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEe
Q psy9139          71 -WQ-SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAA  115 (197)
Q Consensus        71 -~~-~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~  115 (197)
                       .. ..........+.|.++.......|.|.|.|..+.   +..+..+.+
T Consensus       143 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l  192 (196)
T 3p2t_A          143 CLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLEL  192 (196)
T ss_dssp             SEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEE
T ss_pred             eecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEE
Confidence             01 1111223456899999999999999999998763   445554443

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=98.25  E-value=1.8e-06  Score=57.95  Aligned_cols=103  Identities=13%  Similarity=0.100  Sum_probs=64.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC--CE-----EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----C
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV--PN-----ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----T   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~--p~-----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~   68 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|..  |.     -.........+.|.|.....+..     .+.|...     .
T Consensus        73 d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~i~W~~~~~~~~~  147 (197)
T 2j8h_A           73 DATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP-----VITWQKGQDLIDN  147 (197)
T ss_dssp             GCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCC-----EEEEEESSCEECS
T ss_pred             hCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCC-----cEEEEECCEEeec
Confidence            479999999999998878887777654421  10     12223445667788766321111     2444321     1


Q ss_pred             CCcEEEEeCCcccEEEECC-CCCCCEEEEEEEEEcCCcCCC
Q psy9139          69 EDWQSVHVDAEYREFTLTQ-LKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        69 ~~~~~~~~~~~~~~~~i~~-L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....+........+.|.+ +.......|.|.+.|..|...
T Consensus       148 ~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~  188 (197)
T 2j8h_A          148 NGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQ  188 (197)
T ss_dssp             SSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEE
T ss_pred             CCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEe
Confidence            1112222234456788888 888889999999999988643

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.25  E-value=6.3e-07  Score=55.32  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=28.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|++.+|+|++.|.|+|+|.|..|.|+.+.
T Consensus        71 ~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~  102 (117)
T 1uem_A           71 TTLYTVRGLRPNTIYLFMVRAINPQGLSDPSP  102 (117)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEEETTEEEEECC
T ss_pred             cCEEEECCCCCCCEEEEEEEEECCCccCCCcC
Confidence            45799999999999999999999999987544

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=98.23  E-value=1.3e-06  Score=65.16  Aligned_cols=104  Identities=17%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~~   73 (197)
                      ++|.|+|.|.|..|.......+.+..+|....  ..........+.|.|.....+..     .+.|....     .....
T Consensus       269 D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-----~i~W~k~g~~l~~~~~~~  343 (384)
T 3kld_A          269 DAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKP-----TYRWLKNGDPLLTRDRIQ  343 (384)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCC-----EEEEEETTEECCCBTTEE
T ss_pred             hCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCC-----eEEEEECCEECCCCccEE
Confidence            57999999999999988888888877663221  11222345677888876322222     23343211     11111


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                        .  ....+.|.++.......|.|.|.|..|....+..+
T Consensus       344 --~--~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L  379 (384)
T 3kld_A          344 --I--EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAEL  379 (384)
T ss_dssp             --E--ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             --E--eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEE
Confidence              1  23478999999999999999999999875444333

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=98.23  E-value=8e-06  Score=60.97  Aligned_cols=164  Identities=13%  Similarity=0.074  Sum_probs=98.1

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE-EEE-------EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN-ILL-------QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE--   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~-~~~-------~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--   69 (197)
                      ++|.|+|.|.|..|. ....+.+.+...|..+. +..       .......+.|.|.....+..     .+.|.....  
T Consensus       188 d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~~~~~~  262 (403)
T 3laf_A          188 DSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPP-----SFTWLRGEEVI  262 (403)
T ss_dssp             GCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCC-----EEEEEETTEEC
T ss_pred             cCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCC-----eEEEEECCeec
Confidence            579999999999886 34567777777776543 211       12245677887766321111     244442111  


Q ss_pred             ---CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC------C---------------------
Q psy9139          70 ---DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK------G---------------------  119 (197)
Q Consensus        70 ---~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~------~---------------------  119 (197)
                         ......  .....+.|.++.......|.|.+.|..|....+..+.+..+      +                     
T Consensus       263 ~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p  340 (403)
T 3laf_A          263 QLRSKKYSL--LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKP  340 (403)
T ss_dssp             CCSSSSEEE--ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEES
T ss_pred             cCCCceEEE--CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeecc
Confidence               000111  12346889999999899999999988775433222222110      0                     


Q ss_pred             CCCCCeeecCCCCCcc-----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         120 EDQTDWINIPLSNLDE-----ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       120 ~~~~~w~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .+...|..........     .....+.|.++.....-.+.+.|.|..|....+..+
T Consensus       341 ~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  397 (403)
T 3laf_A          341 VPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQL  397 (403)
T ss_dssp             CCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             CCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEE
Confidence            0145676544322110     124568899999888889999999999887665544

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.23  E-value=1.2e-06  Score=54.95  Aligned_cols=33  Identities=33%  Similarity=0.441  Sum_probs=29.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...|+|.+|+|++.|.|+|+|+|.+|.|+++..
T Consensus        80 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~  112 (126)
T 1x5i_A           80 QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE  112 (126)
T ss_dssp             CCEEEECSCCSSCEECCEEEEECSSCBCCCCCC
T ss_pred             eeEEEEeCCCCCCEEEEEEEEEeCCccCcceee
Confidence            567999999999999999999999999986543

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.22  E-value=1.2e-06  Score=54.50  Aligned_cols=33  Identities=18%  Similarity=0.276  Sum_probs=29.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|+++..
T Consensus        75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~  107 (121)
T 1x4z_A           75 RLSVEITGLEKGISYKFRVRALNMLGESEPSAP  107 (121)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEETTEECCCCCC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCC
Confidence            567999999999999999999999999886543

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=98.22  E-value=1.4e-06  Score=62.20  Aligned_cols=164  Identities=13%  Similarity=0.091  Sum_probs=92.3

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC------c
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED------W   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~------~   71 (197)
                      ++|.|+|.|.|..|. .+..+.+.+..+|....  ..........+.|.|.....+..     .+.|......      .
T Consensus        73 D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-----~v~W~~~~~~~~~~~~~  147 (291)
T 1qz1_A           73 DAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPP-----TIIWKHKGRDVILKKDV  147 (291)
T ss_dssp             GCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCC-----EEEEEETTSCSSTTCCT
T ss_pred             CCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCC-----EEEEEECCEEcccCCCc
Confidence            479999999999974 45666777766552211  01112345678888876332111     2455422111      1


Q ss_pred             EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCc--eEe------ecC-----------------------CC
Q psy9139          72 QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT--IAA------STK-----------------------GE  120 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~--~~~------~t~-----------------------~~  120 (197)
                      ....  .....+.|.++.......|.|.+.|..+.......  +.+      ...                       +.
T Consensus       148 ~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~  225 (291)
T 1qz1_A          148 RFIV--LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPE  225 (291)
T ss_dssp             TEEE--CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESC
T ss_pred             eEEE--ccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCC
Confidence            1111  12346888999998888999998876532211110  100      000                       01


Q ss_pred             CCCCeeecCCCCCcc----------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         121 DQTDWINIPLSNLDE----------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       121 ~~~~w~~~~~~~~~~----------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      +...|..........          .+...+.|.++.....-.+.+.|.|..|....+..+
T Consensus       226 p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  286 (291)
T 1qz1_A          226 PTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHL  286 (291)
T ss_dssp             CEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             CcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEE
Confidence            145666543322110          113468899999888889999999999875544433

>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B

Probab=98.20  E-value=3.6e-06  Score=56.85  Aligned_cols=103  Identities=15%  Similarity=0.084  Sum_probs=65.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEE-EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE-EEeCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILL-QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS-VHVDA   78 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~-~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~-~~~~~   78 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|..|.+.+ .......+.|.|.....   |.  -.+.|......... .....
T Consensus        78 D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~---P~--p~v~W~~~~~~~~~~~~~~~  152 (202)
T 3bp6_B           78 DSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGY---PL--AEVSWQNVSVPANTSHIRTP  152 (202)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEB---SC--CEEEETTCCSCCEEEEEECT
T ss_pred             HCcEEEEEEEeCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEcccc---CC--ceEEEEeCCCCccCceeeCC
Confidence            47999999999999888888999998888887544 44567788898886211   11  13555432222211 11111


Q ss_pred             c--ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          79 E--YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        79 ~--~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .  .....+..+.......|.|.|.|..|...
T Consensus       153 ~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~  184 (202)
T 3bp6_B          153 EGLYQVTSVLRLKPQPSRNFSCMFWNAHMKEL  184 (202)
T ss_dssp             TSCEEEEEEEEECCCTTCCEEEEEEETTTTEE
T ss_pred             CCCEEEEEEEEEEcCCCCEEEEEEEcCCcccc
Confidence            1  12233445555566778899999987643

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=98.19  E-value=2.5e-06  Score=51.22  Aligned_cols=34  Identities=29%  Similarity=0.344  Sum_probs=30.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+++...
T Consensus        54 ~t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p~~~~   87 (100)
T 3b83_A           54 ITSLTLTNLEPNTTYEIRIVARNGQQYSPPVSTT   87 (100)
T ss_dssp             EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred             ceEEEECCCCCCCEEEEEEEEEeCCCCCCCEEEE
Confidence            5689999999999999999999999999865544

>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=98.18  E-value=9.1e-05  Score=49.42  Aligned_cols=109  Identities=10%  Similarity=0.067  Sum_probs=67.8

Q ss_pred             CCeeEEEEEEeCCCC--ceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEE
Q psy9139           1 MVGNYTCLADNIFGK--DDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~--~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~   73 (197)
                      ++|.|+|.+.|..|.  .+..+.+.+...+.+|.+....    .....+.|.|....  ..+    .+.|. +.......
T Consensus        68 D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~--~~~----~~~w~k~g~~~~~~  141 (188)
T 1oll_A           68 MAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT--ATS----MFLLLKEGRSSHVQ  141 (188)
T ss_dssp             GCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSS--SCS----EEEEEEESSSCEEE
T ss_pred             cCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCC--CCC----EEEEEECCcccccc
Confidence            579999999997663  3456677777655566543221    34678999998643  212    23343 32222111


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCC-cCCCCCCceEe
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSI-GESKPSKTIAA  115 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~-g~~~~s~~~~~  115 (197)
                      .........+.|.++.......|.|.|.|.. ..+..|..+.+
T Consensus       142 ~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l  184 (188)
T 1oll_A          142 RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL  184 (188)
T ss_dssp             EEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEE
T ss_pred             ccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEE
Confidence            2233455678999999999999999998864 33455655544

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R

Probab=98.18  E-value=2.1e-07  Score=75.40  Aligned_cols=173  Identities=13%  Similarity=0.111  Sum_probs=0.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC---CC-------
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR---TE-------   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~---~~-------   69 (197)
                      ++|.|+|.|.|..|..+..+.+.+..+|.... ..........+.|.|.....+...+.+|+......   ..       
T Consensus       524 d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~  603 (772)
T 3v2a_R          524 VSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVC  603 (772)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCccccccc
Confidence            47999999999999888888888877664332 11222345567777765322222233332111000   00       


Q ss_pred             -----CcEEE-----EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC--CceEeecCCCC----------------
Q psy9139          70 -----DWQSV-----HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS--KTIAASTKGED----------------  121 (197)
Q Consensus        70 -----~~~~~-----~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s--~~~~~~t~~~~----------------  121 (197)
                           .|...     ........+.|.++.....+.|.|.|.|..|....+  ..+.+.....|                
T Consensus       604 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~  683 (772)
T 3v2a_R          604 KNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGES  683 (772)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCC
Confidence                 00000     001112348889999999999999999965432211  11111111111                


Q ss_pred             -------------CCCeeecCCCCCcc------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEE
Q psy9139         122 -------------QTDWINIPLSNLDE------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFAT  173 (197)
Q Consensus       122 -------------~~~w~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t  173 (197)
                                   ...|.+........      .....+.|.++.....-.+++.|.|..|....+..+..
T Consensus       684 ~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V  754 (772)
T 3v2a_R          684 IEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII  754 (772)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             EEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEE
Confidence                         56676654332211      11456888888888888999999999998876655533

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.18  E-value=2.8e-06  Score=52.53  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=30.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+...
T Consensus        73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~  106 (119)
T 1wfn_A           73 TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST  106 (119)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred             ceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence            5579999999999999999999999999977655

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.18  E-value=8.9e-07  Score=55.37  Aligned_cols=32  Identities=19%  Similarity=0.299  Sum_probs=29.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+++.+|+|++.|.|+|+|.|..|.|+++.
T Consensus        78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~  109 (124)
T 1wis_A           78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQ  109 (124)
T ss_dssp             CSEEEECSCCTTSEECCCCEEECSSCBCCCCC
T ss_pred             ceEEEeCCCCCCCEEEEEEEEEECCccCCCcC
Confidence            55799999999999999999999999998654

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=98.18  E-value=2.6e-07  Score=66.80  Aligned_cols=166  Identities=13%  Similarity=0.126  Sum_probs=91.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC-------------CCC-EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP-------------GVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD   66 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P-------------~~p-~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~   66 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|             +.+ .+.+.   .....+.+....  ..+.  -.+.|..
T Consensus        72 d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~---~~~~~l~c~~~~--~~p~--~~i~W~~  144 (317)
T 2y25_A           72 DAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQST---AEGIQLYSFVTY--YVED--LKVNWSH  144 (317)
T ss_dssp             TCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEEC---SSEEEEEEEBSS--CCSS--CEEEEEE
T ss_pred             cCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEee---ccccEEEEEecc--CCCC--cEEEEEE
Confidence            5799999999999977666655544322             111 13332   222334443321  0111  1233431


Q ss_pred             C-----CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce----------------------------
Q psy9139          67 R-----TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI----------------------------  113 (197)
Q Consensus        67 ~-----~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~----------------------------  113 (197)
                      .     ...............+.|.++.......|.|.+.|..|....+..+                            
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~  224 (317)
T 2y25_A          145 NGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARV  224 (317)
T ss_dssp             SSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEE
T ss_pred             CCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcc
Confidence            1     1122223334444568888999988999999999877643211110                            


Q ss_pred             ------------------Eee--cCCCCCCCeeecCCCCCcc---------cccceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         114 ------------------AAS--TKGEDQTDWINIPLSNLDE---------ALEMPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       114 ------------------~~~--t~~~~~~~w~~~~~~~~~~---------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                                        ...  ..+.+...|..........         .....+.|.++.....-.+++.|.|..|.
T Consensus       225 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~  304 (317)
T 2y25_A          225 LGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS  304 (317)
T ss_dssp             EEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEE
T ss_pred             cccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCe
Confidence                              000  0111146676554322110         11237899999998888999999999987


Q ss_pred             CCcceEEEE
Q psy9139         165 TNKNYVFAT  173 (197)
Q Consensus       165 ~~~~~~~~t  173 (197)
                      ...+..+..
T Consensus       305 ~~~~~~l~V  313 (317)
T 2y25_A          305 ETSDFTVSV  313 (317)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            665544433

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.16  E-value=2.8e-07  Score=56.21  Aligned_cols=39  Identities=15%  Similarity=0.192  Sum_probs=33.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...|++.+|.+++.|.|+|.|.|.+|.|+++..+.+.|.
T Consensus        62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~  100 (108)
T 1v5j_A           62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS  100 (108)
T ss_dssp             CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCS
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeC
Confidence            568999999999999999999999999998766555543

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A

Probab=98.14  E-value=1.5e-05  Score=54.11  Aligned_cols=105  Identities=19%  Similarity=0.057  Sum_probs=62.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEE--EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILL--QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDA   78 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~--~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~   78 (197)
                      +.|.|+|.|.|..|..+..+.+.|..+|..+.+..  .......+.|.|....  ..+.....+.|...+..........
T Consensus        65 D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~--~~p~~~~~i~W~k~~~~l~~~~~~~  142 (202)
T 1vca_A           65 NEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVAD--VYPFDRLEIDLLKGDHLMKSQEFLE  142 (202)
T ss_dssp             GCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEE--EBSGGGEEEEEEETTEEEEEEECCS
T ss_pred             HCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECC--cCCCCCeEEEEEeCCeECccccccc
Confidence            47999999999999888888999998887776332  1234567888887632  1111123455543221111111110


Q ss_pred             -------c--ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          79 -------E--YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        79 -------~--~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                             .  ...+++..........|.|.|.|..|..
T Consensus       143 ~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~  180 (202)
T 1vca_A          143 DADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM  180 (202)
T ss_dssp             CCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCC
T ss_pred             ccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCC
Confidence                   1  1224555555545557889999988764

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*

Probab=98.13  E-value=6.4e-05  Score=50.72  Aligned_cols=102  Identities=8%  Similarity=0.107  Sum_probs=68.1

Q ss_pred             CCeeEEEEEEeCC-CCceeEEEEEecCCCCCCEEEEEe---ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc---EE
Q psy9139           1 MVGNYTCLADNIF-GKDDIYYQVTILSPPGVPNILLQS---TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW---QS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~-G~~~~~~~~~~~~~P~~p~~~~~~---~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~---~~   73 (197)
                      ++|.|+|.+.|.. +.....+.+.+..++..|.+....   .....+.|.|.....  .+    .+.|.......   ..
T Consensus        82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~--pp----~i~W~~~g~~l~~~~~  155 (208)
T 3r4d_A           82 DMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDI--GA----NIQWLFNSQSLQLTER  155 (208)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCT--TC----EEEEEETTEECCCCSS
T ss_pred             CCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCC--CC----ceEEEECCEeCCCCCC
Confidence            4799999999995 556677788888888777644332   345678899986432  12    24443211000   01


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .........+.|.++.......|.|.+.|..|...
T Consensus       156 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~  190 (208)
T 3r4d_A          156 MTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRR  190 (208)
T ss_dssp             EEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEE
T ss_pred             eEEcCCCCEEEEeccCHHhCeEEEEEEecCCCccc
Confidence            12233446799999999999999999999998753

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=98.13  E-value=9e-05  Score=54.66  Aligned_cols=157  Identities=8%  Similarity=-0.019  Sum_probs=92.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC------------
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT------------   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~------------   68 (197)
                      ++|.|+|.|.|..+.....+.+.+..+|..|. .........+.|.|............-.+.|....            
T Consensus       153 d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~  231 (363)
T 1wio_A          153 DSGTWTCTVLQNQKKVEFKIDIVVLAFQKASS-IVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDL  231 (363)
T ss_dssp             GCEECEEEEEETTEEEEECCEECEECCSCSEE-EEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEE
T ss_pred             cCCEEEEEEecCCCeEEEEEEEEEecCCCCCC-ceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEe
Confidence            57999999999977777777787877777664 22223456778888552211110012234454211            


Q ss_pred             --CCcEEEEe---------CCcccEEEECCCCCCCEEEEEEEEEcC--CcCCCCCC------------ceE--eecCCCC
Q psy9139          69 --EDWQSVHV---------DAEYREFTLTQLKCGTHYKINIKLVNS--IGESKPSK------------TIA--ASTKGED  121 (197)
Q Consensus        69 --~~~~~~~~---------~~~~~~~~i~~L~p~~~y~~~v~a~~~--~g~~~~s~------------~~~--~~t~~~~  121 (197)
                        ........         ......+.|.++.......|.|.|.|.  .|......            .+.  +...+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p  311 (363)
T 1wio_A          232 KNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSP  311 (363)
T ss_dssp             CSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESSCCT
T ss_pred             cCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccccCC
Confidence              11111000         112347899999999999999999999  76432211            111  1112222


Q ss_pred             C--CCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcC
Q psy9139         122 Q--TDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKND  161 (197)
Q Consensus       122 ~--~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~  161 (197)
                      .  ..|.........   ...+.|..+.+...-.+.+.|.|.
T Consensus       312 ~~~i~W~~~~~~~~~---~~~l~i~~v~~~d~G~Y~C~a~~~  350 (363)
T 1wio_A          312 KLMLSLKLENKEAKV---SKREKAVWVLNPEAGMWQCLLSDS  350 (363)
T ss_dssp             TCCEEEECSSSSCSE---EESSSEEEESSCCSEEEEEEECSS
T ss_pred             CccEEEEeCCCceee---eeeeeeeeeccccceeEEEEEecC
Confidence            4  788877655543   445667777777777888888854

>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}

Probab=98.13  E-value=1.9e-05  Score=53.07  Aligned_cols=109  Identities=9%  Similarity=0.030  Sum_probs=63.5

Q ss_pred             CCeeEEEEEEeCCCCc--eeEEEEEecCCCCCCEEEE----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc--E
Q psy9139           1 MVGNYTCLADNIFGKD--DIYYQVTILSPPGVPNILL----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW--Q   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~--~~~~~~~~~~~P~~p~~~~----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~--~   72 (197)
                      ++|.|+|.|.|..|..  +..+.+.+...+.+|.+..    .......+.|.|.....+  +    .+.|.......  .
T Consensus        69 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p--~----~~~W~k~g~~~~~~  142 (196)
T 2d3v_A           69 HAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRF--D----RFILTEEGDHKLSW  142 (196)
T ss_dssp             GCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCC--S----EEEEEEC---CCEE
T ss_pred             HCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCC--C----EEEEEccCCccccc
Confidence            5799999999998743  4567777777555555322    123456788999875422  1    24444222111  1


Q ss_pred             EE---Ee--CCcccEEEECCCCCCCEEEEEEEEEcCCc---CCCCCCceEe
Q psy9139          73 SV---HV--DAEYREFTLTQLKCGTHYKINIKLVNSIG---ESKPSKTIAA  115 (197)
Q Consensus        73 ~~---~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~g---~~~~s~~~~~  115 (197)
                      ..   ..  ......+.|.++.......|.|.|.|..+   .+..+..+.+
T Consensus       143 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l  193 (196)
T 2d3v_A          143 TLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHILQVWSEPSDLLEI  193 (196)
T ss_dssp             EEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEEEEECCCCCCEEE
T ss_pred             ccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCCCccCCCCccEEE
Confidence            10   11  12236789999999999999999999765   2455555443

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=98.12  E-value=4.8e-06  Score=63.12  Aligned_cols=98  Identities=9%  Similarity=0.052  Sum_probs=58.7

Q ss_pred             CCeeEEEEEEeCCCCcee-EEEEEecCCCCCCEEEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeCCCC-----cE-
Q psy9139           1 MVGNYTCLADNIFGKDDI-YYQVTILSPPGVPNILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRTED-----WQ-   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~-~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~~-----~~-   72 (197)
                      ++|.|+|.|.|..|.... .+.+.+..+|..+...........+.|.|.... .+..     .+.|...+..     .. 
T Consensus       202 d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p-----~i~W~k~g~~l~~~~~~~  276 (423)
T 3qs7_E          202 FGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGF-----GLTWELENKALEEGNYFE  276 (423)
T ss_dssp             CSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCC-----CEEEEESSSBCCGGGEEE
T ss_pred             cCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCc-----EEEEEECCEEccccceee
Confidence            479999999999997543 466777766644322223345677888887632 1111     2344422111     00 


Q ss_pred             EEEe-C----CcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          73 SVHV-D----AEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        73 ~~~~-~----~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .... .    .....+.|.++.......|.|.|.|.
T Consensus       277 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~  312 (423)
T 3qs7_E          277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH  312 (423)
T ss_dssp             EEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred             cccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence            0011 1    11235889999999999999999887

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=98.12  E-value=8e-06  Score=54.63  Aligned_cols=108  Identities=14%  Similarity=0.168  Sum_probs=62.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC----CE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV----PN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~----p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~   75 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|..    +. ..........+.|.|.....+...+.+|+-.............
T Consensus        74 d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~  153 (197)
T 3lcy_A           74 DEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIE  153 (197)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEE
T ss_pred             CCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEE
Confidence            479999999999998777777777644321    11 1122235667888887532211122222110001112222223


Q ss_pred             eCCcccEEEECCCCC-CCEEEEEEEEEcCCcCCC
Q psy9139          76 VDAEYREFTLTQLKC-GTHYKINIKLVNSIGESK  108 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p-~~~y~~~v~a~~~~g~~~  108 (197)
                      .......+.|.++.. .....|.|.+.|..|...
T Consensus       154 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~  187 (197)
T 3lcy_A          154 NTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVD  187 (197)
T ss_dssp             ECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEE
T ss_pred             EcCCEEEEEEccccchhhCceEEEEEEcCcCceE
Confidence            233446788888874 567889999999988654

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.12  E-value=5.5e-06  Score=51.20  Aligned_cols=42  Identities=12%  Similarity=0.155  Sum_probs=34.9

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         139 MPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       139 ~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ..+.+. |++++.|.|+|+|+|.+|.|+.+..+...|.++.++
T Consensus        73 ~~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~p  114 (117)
T 1wj3_A           73 TSAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP  114 (117)
T ss_dssp             SEEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred             cEEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCC
Confidence            357777 999999999999999999999887777777665543

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.12  E-value=6.5e-06  Score=48.65  Aligned_cols=34  Identities=18%  Similarity=0.221  Sum_probs=29.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|.+....
T Consensus        54 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~   87 (94)
T 1j8k_A           54 EDTAELQGLRPGSEYTVSVVALHDDMESQPLIGT   87 (94)
T ss_dssp             CCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEE
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeE
Confidence            5589999999999999999999999999865443

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.11  E-value=2e-06  Score=53.89  Aligned_cols=40  Identities=20%  Similarity=0.182  Sum_probs=30.9

Q ss_pred             EEcCCCCCCeEEEEEEEEcCCCCCCcceE-EEEeeeCCCcC
Q psy9139         142 VIENLLPATRYELTISAKNDAGSTNKNYV-FATLSVNGGKA  181 (197)
Q Consensus       142 ~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~-~~t~~~~~~~~  181 (197)
                      .+.+|+|++.|.|+|+|.|..|.|+++.. ....+....+.
T Consensus        77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~  117 (127)
T 1uey_A           77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPD  117 (127)
T ss_dssp             EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCS
T ss_pred             EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCC
Confidence            57799999999999999999999986554 23445444443

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=98.11  E-value=3.6e-06  Score=62.60  Aligned_cols=99  Identities=11%  Similarity=0.098  Sum_probs=66.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDA   78 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~   78 (197)
                      +.|.|+|.|.|..|..+..+.+.+..+|....  ..........+.|.|.....+.   .  .+.|...+.     .+..
T Consensus       281 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~---p--~i~W~~~g~-----~i~~  350 (388)
T 2v5m_A          281 DSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPI---K--TVSWMKDGK-----AIGH  350 (388)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECC---C--EEEEEETTE-----ECSC
T ss_pred             HCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccC---C--eEEEEECCE-----ECcc
Confidence            57999999999999888888888876653211  1122234567888887632111   1  355543221     1233


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ....+.|.++.......|.|.|.|..|....
T Consensus       351 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  381 (388)
T 2v5m_A          351 SESVLRIESVKKEDKGMYQCFVRNDRESAEA  381 (388)
T ss_dssp             CSSEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred             CCCEEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence            4567999999999999999999999886543

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=98.09  E-value=2.2e-05  Score=56.04  Aligned_cols=158  Identities=15%  Similarity=0.076  Sum_probs=92.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEE-EeCCCCc---EEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSY-RDRTEDW---QSV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~-~~~~~~~---~~~   74 (197)
                      ++|.|+|.|.|  |. ...+.+.+..+|.+..  ..........+.|.|... .+.    .-.+.| .......   ...
T Consensus        68 d~G~Y~C~~~n--g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~p~----~~~v~W~~~~g~~l~~~~~~  139 (290)
T 2o26_X           68 RTGTYTCSNSN--GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLT-DPQ----VSQYSLIECDGKSLPTDLTF  139 (290)
T ss_dssp             GCEEEEEEESS--SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBS-CCS----CEEEEEEETTSCCCCTTCEE
T ss_pred             hCeEEEEEeeC--Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCC-CCC----CceEEEEeCCCcCCCCCCce
Confidence            57999999999  65 6777888887665431  112223566788888764 211    123555 3211110   111


Q ss_pred             EeCCcccEEEECCCCCCCEE-EEEEEEEcCCcCCCC-CCceEee--cCCCC-----------------------------
Q psy9139          75 HVDAEYREFTLTQLKCGTHY-KINIKLVNSIGESKP-SKTIAAS--TKGED-----------------------------  121 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y-~~~v~a~~~~g~~~~-s~~~~~~--t~~~~-----------------------------  121 (197)
                      ... ....+.|.++...... .|.|.+.|..|.... ...+.+.  ....|                             
T Consensus       140 ~~~-~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p  218 (290)
T 2o26_X          140 VPN-PKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS  218 (290)
T ss_dssp             EEE-TTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT
T ss_pred             eeC-CCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc
Confidence            111 1246888888888888 888999887554211 1112211  00000                             


Q ss_pred             C-CCeeecCCCC----Cc-----------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         122 Q-TDWINIPLSN----LD-----------EALEMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       122 ~-~~w~~~~~~~----~~-----------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      . ..|.......    ..           ......+.|.++.....-.+.+.|.|..|....
T Consensus       219 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~  280 (290)
T 2o26_X          219 VNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANV  280 (290)
T ss_dssp             CEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEE
T ss_pred             eeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEE
Confidence            3 6787665441    10           011456888999998888999999999887643

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=9.4e-06  Score=49.41  Aligned_cols=33  Identities=12%  Similarity=0.194  Sum_probs=29.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+++..
T Consensus        59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~   91 (108)
T 2ee3_A           59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTG   91 (108)
T ss_dssp             CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEE
T ss_pred             cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccC
Confidence            457999999999999999999999999986543

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}

Probab=98.08  E-value=1.5e-05  Score=54.08  Aligned_cols=109  Identities=8%  Similarity=-0.013  Sum_probs=63.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecC------------------CCCCCEE-----EEEeecCCeEEEEeeeCCCCCccc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILS------------------PPGVPNI-----LLQSTTTHSISILWKPSYDGGAII   57 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~------------------~P~~p~~-----~~~~~~~~~~~l~W~~~~~~~~~i   57 (197)
                      ++|.|+|.|.|..|.....+.+.+..                  .+.++..     .........+.|.|.....+...+
T Consensus        70 D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v  149 (212)
T 2r15_A           70 DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEV  149 (212)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEE
T ss_pred             cCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceE
Confidence            47999999999988777776665542                  1111111     122244567888887643222222


Q ss_pred             cEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          58 THYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        58 ~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .||+-..... ...............+.|.++.......|.|.|.|..|....
T Consensus       150 ~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~  202 (212)
T 2r15_A          150 SWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS  202 (212)
T ss_dssp             EEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             EEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEE
Confidence            2222111111 122222222244567999999999999999999999886533

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=98.07  E-value=6.3e-05  Score=59.05  Aligned_cols=107  Identities=10%  Similarity=0.032  Sum_probs=67.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCC-CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-------
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSP-PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-------   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~-P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-------   71 (197)
                      +.|.|+|+| |..|.....+.+.+... |.... ..........+.|.|....+..+. ....+.|...+...       
T Consensus       417 D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~-p~~~v~W~k~g~~~~~~~~~~  494 (585)
T 2ocw_A          417 DAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSY-EKYWCKWNNTGCQALPSQDEG  494 (585)
T ss_pred             hCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCC-ccEEEEEeecCceeeeccCCC
Confidence            579999999 99998888888888754 32211 222334567789999874321111 12345554221110       


Q ss_pred             --E-EEEe--CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          72 --Q-SVHV--DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        72 --~-~~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                        . ....  ......++|.++.......|.|.|.|..|.+..
T Consensus       495 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  537 (585)
T 2ocw_A          495 PSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGET  537 (585)
T ss_pred             CCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEE
Confidence              0 1111  123357899999999999999999999886543

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=98.06  E-value=2.5e-06  Score=52.61  Aligned_cols=29  Identities=17%  Similarity=0.315  Sum_probs=26.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      ...+++.+|.|++.|.|+|+|.|..|.+.
T Consensus        70 ~~~~~v~~L~p~t~Y~FRV~A~N~~G~~~   98 (115)
T 2ic2_A           70 SFTASVTDLKPQHTYRFRILAVYSNNDNK   98 (115)
T ss_dssp             EEEEEECSCCSSEEEEEEEEEEETTSCEE
T ss_pred             eeEEEeCCCCCCCEEEEEEEEEeCCCCCC
Confidence            45799999999999999999999999865

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=98.06  E-value=7.1e-06  Score=49.54  Aligned_cols=32  Identities=31%  Similarity=0.417  Sum_probs=28.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|.+..
T Consensus        55 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~   86 (104)
T 2rb8_A           55 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPAK   86 (104)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEeCCccCCCEE
Confidence            45799999999999999999999999988543

>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*

Probab=98.06  E-value=0.00011  Score=50.41  Aligned_cols=110  Identities=13%  Similarity=0.013  Sum_probs=66.4

Q ss_pred             CCeeEEEEEEeCCCCc--eeEEEEEecCCCCCCEEEEE----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-EE
Q psy9139           1 MVGNYTCLADNIFGKD--DIYYQVTILSPPGVPNILLQ----STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-QS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~--~~~~~~~~~~~P~~p~~~~~----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-~~   73 (197)
                      ++|.|+|.|.|..|..  +..+.+.+...+.+|.+...    ......+.|.|.....+  + .  .+.|...+... ..
T Consensus        75 D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~--~-~--~~~W~k~g~~~~~~  149 (218)
T 1uct_A           75 KAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIP--F-D--RFSLAKEGELSLPQ  149 (218)
T ss_dssp             GCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSC--C-S--EEEEEETTCSSCCS
T ss_pred             cCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCC--C-C--EEEEEECCCccccc
Confidence            4799999999987732  34567777765555653322    13457789999543211  1 2  23443222111 11


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCc---CCCCCCceEe
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIG---ESKPSKTIAA  115 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g---~~~~s~~~~~  115 (197)
                      .........+.|.++.......|.|.|.|...   .+..+..+.+
T Consensus       150 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l  194 (218)
T 1uct_A          150 HQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALEL  194 (218)
T ss_dssp             EEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEE
T ss_pred             ccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEE
Confidence            11234456799999999999999999998642   3455555444

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}

Probab=98.06  E-value=2.6e-05  Score=54.28  Aligned_cols=106  Identities=15%  Similarity=0.084  Sum_probs=64.2

Q ss_pred             CCeeEEEEEEeCCCCc-----eeEEEEEecCCCCCCEEEE------EeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-
Q psy9139           1 MVGNYTCLADNIFGKD-----DIYYQVTILSPPGVPNILL------QSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-----~~~~~~~~~~~P~~p~~~~------~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-   68 (197)
                      ++|.|+|.|.|..+..     ...+.+.+..+|.+|.+.+      .......+.|.|.....+...+.||+-...... 
T Consensus       101 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~  180 (250)
T 2fbo_J          101 DGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENY  180 (250)
T ss_dssp             GCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCS
T ss_pred             hCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCccccc
Confidence            4799999999988853     4577888888765554222      122467788888774322223443332211000 


Q ss_pred             CCc--EEE------------------EeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          69 EDW--QSV------------------HVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        69 ~~~--~~~------------------~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ...  ..+                  ........+.|.++.......|.|.|.|..|.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~  238 (250)
T 2fbo_J          181 ETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE  238 (250)
T ss_dssp             SSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred             ccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence            000  000                  00002357999999999999999999997764

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.05  E-value=1.8e-05  Score=47.84  Aligned_cols=31  Identities=16%  Similarity=0.131  Sum_probs=28.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.+.+.
T Consensus        58 ~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~   88 (105)
T 2cum_A           58 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPV   88 (105)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEBTTBCCCCE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCcccCCE
Confidence            5689999999999999999999999988854

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=98.05  E-value=6.5e-06  Score=61.11  Aligned_cols=101  Identities=18%  Similarity=0.148  Sum_probs=65.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~~   73 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|....  ..........+.|.|.....+..     .+.|...+     .....
T Consensus       268 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~v~W~~~g~~~~~~~~~~  342 (382)
T 1cs6_A          268 DEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRP-----AVRWLRDGQPLASQNRIE  342 (382)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCC-----EEEEEETTEECCCCSSEE
T ss_pred             hCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCC-----EEEEEECCEECCCCceEE
Confidence            47999999999999988888888876653221  11122346678888876322111     24443211     11111


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                        .  ....+.|.++.......|.|.|.|..|....+
T Consensus       343 --~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~  375 (382)
T 1cs6_A          343 --V--SGGELRFSKLVLEDSGMYQCVAENKHGTVYAS  375 (382)
T ss_dssp             --E--ETTEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred             --E--ECCEEEECcCCcccCEEEEEEEEeCCCeEEEE
Confidence              1  23479999999999999999999999875443

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=98.04  E-value=4.2e-05  Score=55.23  Aligned_cols=49  Identities=14%  Similarity=0.100  Sum_probs=34.5

Q ss_pred             CCeeecCCCCCcc--cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         123 TDWINIPLSNLDE--ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       123 ~~w~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ..|..........  .....+.|.++.....-.+++.|.|..|....+..+
T Consensus       250 v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  300 (313)
T 4fqp_A          250 YNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTV  300 (313)
T ss_dssp             EEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEE
T ss_pred             EEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEE
Confidence            5687765443221  224578999999988889999999999976554433

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=98.04  E-value=1e-05  Score=57.63  Aligned_cols=166  Identities=10%  Similarity=-0.025  Sum_probs=90.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC----CcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE----DWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----~~~~   73 (197)
                      ++|.|+|.|.|..|..+..+.+.+..+|.+..   ..........+.|.|.... +... .  .+.|...++    ....
T Consensus        62 d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~-~--~v~W~~~~~~~~~~~~~  137 (292)
T 4dkd_C           62 NTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLE-A--GVSLVRVRGRPLMRHTN  137 (292)
T ss_dssp             GCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGG-S--SEEEEEGGGCCCCSSCC
T ss_pred             cCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcc-e--eEEEEecCCCccccCCc
Confidence            57999999999999888888888888776432   1222345677888888643 1110 1  233331100    0001


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC-CCceEeecCC--CC----------------------------C
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP-SKTIAASTKG--ED----------------------------Q  122 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~-s~~~~~~t~~--~~----------------------------~  122 (197)
                      .... ....+.|.++.......|.|.+.|..|.... ...+.+....  .|                            .
T Consensus       138 ~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~  216 (292)
T 4dkd_C          138 YSFS-PWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVN  216 (292)
T ss_dssp             EECC-SSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSC
T ss_pred             cccc-CCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCc
Confidence            1111 1223888888888888889999877654211 1122222100  11                            1


Q ss_pred             CC--eeecCCCCCcc----------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         123 TD--WINIPLSNLDE----------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       123 ~~--w~~~~~~~~~~----------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ..  |..........          .....+.|.++.....-.+.+.|.|..|....+..+
T Consensus       217 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l  277 (292)
T 4dkd_C          217 FDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFF  277 (292)
T ss_dssp             CEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEE
T ss_pred             eEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEE
Confidence            22  22222111100          012368899999988899999999999876554433

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3

Probab=98.04  E-value=1.5e-05  Score=52.80  Aligned_cols=94  Identities=13%  Similarity=0.087  Sum_probs=58.4

Q ss_pred             CCeeEEEEEEeCCCCc--eeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKD--DIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDA   78 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~--~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~   78 (197)
                      ++|.|+|.|.|..|..  +..+.+.+..++..|.+...   ...+.|.|.....+..     .+.|.....   .+....
T Consensus        72 D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~~---~~~v~L~C~~~g~p~p-----~i~W~~~g~---~l~~~~  140 (176)
T 1hng_A           72 DSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWE---CSNATLTCEVLEGTDV-----ELKLYQGKE---HLRSLR  140 (176)
T ss_dssp             GCEEEEEEEEETTCCEEEEEEEEEEEECCCCCCEEEEE---TTTTEEEEECSSCSSC-----EEEEEETTE---EEEEES
T ss_pred             cCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCCCEEEec---CCcEEEEEEecCCCCc-----EEEEEECCE---ECCCCC
Confidence            4799999999999986  66778888888777764432   3348888876432221     344543221   111111


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                       .  +.+..+.......|.|.|.|..|...
T Consensus       141 -~--~~i~~~~~~d~G~Y~C~a~N~~g~~~  167 (176)
T 1hng_A          141 -Q--KTMSYQWTNLRAPFKCKAVNRVSQES  167 (176)
T ss_dssp             -S--SEEEEECSCCSSCEEEEEEETTEEEE
T ss_pred             -c--EEEEEEEccCCeEEEEEEEecCCCce
Confidence             1  22334445666778899999988643

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=98.04  E-value=0.00012  Score=54.64  Aligned_cols=163  Identities=14%  Similarity=0.177  Sum_probs=95.2

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCE--E-EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc----E
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPN--I-LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW----Q   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~--~-~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~----~   72 (197)
                      ++|.|+|.|.|..|.. +..+.+.+..+|..+.  . .........+.|.|....  +.+.  ..+.|.......    .
T Consensus        88 D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~--~~p~--~~v~W~~~~~~~~~~~~  163 (404)
T 3p3y_A           88 YEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPP--GLPS--PVIFWMSSSMEPITQDK  163 (404)
T ss_dssp             SCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCC--CSSC--CEEEEECTTSCBCCCCS
T ss_pred             CCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCC--CCCC--CeEEEeCCCccccCCCC
Confidence            4799999999999976 4677888887776553  1 133345678889887632  1121  245555322110    0


Q ss_pred             EEEeCCcccEEEECCCCCCC-EEEEEEEEEcCCcCCC---CCCceEeec-------------------------------
Q psy9139          73 SVHVDAEYREFTLTQLKCGT-HYKINIKLVNSIGESK---PSKTIAAST-------------------------------  117 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~-~y~~~v~a~~~~g~~~---~s~~~~~~t-------------------------------  117 (197)
                      .... .....+.|.++.... ...|.|.+.|..|...   ....+.+..                               
T Consensus       164 ~~~~-~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l  242 (404)
T 3p3y_A          164 RVSQ-GHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLL  242 (404)
T ss_dssp             SEEE-CTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEE
T ss_pred             cEEE-cCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEE
Confidence            1111 123357788887766 3677788887665421   111111110                               


Q ss_pred             ----C--CCCCCCeeecCCCCCcc-----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         118 ----K--GEDQTDWINIPLSNLDE-----ALEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       118 ----~--~~~~~~w~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                          .  +.+...|..........     .....+.|.++.....-.+++.|.|..|.....
T Consensus       243 ~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~  304 (404)
T 3p3y_A          243 ECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT  304 (404)
T ss_dssp             ECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred             EEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEE
Confidence                0  00145676655433221     124568999999988899999999998875443

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C

Probab=98.03  E-value=0.0001  Score=50.38  Aligned_cols=115  Identities=16%  Similarity=0.211  Sum_probs=67.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCC-CCEE------EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----C
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPG-VPNI------LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----T   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~-~p~~------~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~   68 (197)
                      ++|.|+|.|.|..|.....+.+.+...+. +|.+      .........+.|.|.....+...+.+|+-...+.     .
T Consensus        87 d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~  166 (231)
T 3ojm_B           87 DKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPD  166 (231)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTT
T ss_pred             cCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCC
Confidence            57999999999999888888888876543 2211      1122345678888876332222222222100000     1


Q ss_pred             CC-cE-EEE----eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          69 ED-WQ-SVH----VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        69 ~~-~~-~~~----~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      .. .. ...    .......+.|.++.......|.|.+.|..|....+..+.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V  219 (231)
T 3ojm_B          167 GLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTV  219 (231)
T ss_dssp             SCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEE
Confidence            10 11 111    1123456899999999999999999999887644434443

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=98.03  E-value=3.7e-05  Score=52.24  Aligned_cols=100  Identities=16%  Similarity=0.135  Sum_probs=64.6

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCC----CCEEEE-----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPG----VPNILL-----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~----~p~~~~-----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--   68 (197)
                      ++|.|+|.|.|..|. ....+.+.+...+.    .|.+..     .......+.|.|.....+..     .+.|....  
T Consensus        76 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-----~i~W~~~~~~  150 (212)
T 2yd1_A           76 DDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTP-----NIYWIKNQTK  150 (212)
T ss_dssp             TCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCC-----EEEEEETTEE
T ss_pred             cCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCC-----eEEEEECCeE
Confidence            579999999999998 67788888876532    243221     12335678888876322211     24444211  


Q ss_pred             ----CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          69 ----EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        69 ----~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                          ......    ....+.|.++.......|.|.|.|..|....
T Consensus       151 ~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s  191 (212)
T 2yd1_A          151 VDMSNPRYSL----KDGFLQIENSREEDQGKYECVAENSMGTEHS  191 (212)
T ss_dssp             CCTTSTTEEE----ETTEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred             cccCCCeEEc----cCCeEEEccCChhhCEEEEEEeecCCCceeE
Confidence                111111    1237899999999999999999999987543

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=98.03  E-value=4.6e-06  Score=62.29  Aligned_cols=102  Identities=17%  Similarity=0.133  Sum_probs=65.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~~   73 (197)
                      +.|.|+|.|.|..|.....+.+.+..+|....  ..........+.|.|.....+..     .+.|....     .....
T Consensus       286 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-----~v~W~~~g~~~~~~~~~~  360 (403)
T 3laf_A          286 DSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP-----TVNWMKNGDVVIPSDYFQ  360 (403)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCC-----EEEEEETTEECCCSSSEE
T ss_pred             HCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCC-----EEEEEECCEECCCCCcEE
Confidence            57999999999999888888888877652211  11122345678888776321111     24444211     11111


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ..   ....+.|.++.......|.|.|.|..|....+
T Consensus       361 ~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~  394 (403)
T 3laf_A          361 IV---GGSNLRILGVVKSDEGFYQCVAENEAGNAQSS  394 (403)
T ss_dssp             EE---TTTEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred             Ee---cCccEEEeccccccCEEEEEEEEcCCceEEEE
Confidence            11   23568999999999999999999999876543

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.02  E-value=5.9e-06  Score=51.83  Aligned_cols=37  Identities=24%  Similarity=0.281  Sum_probs=29.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|++.+|+|++.|.|+|+|.|.+|.+ .+..+...|
T Consensus        79 ~~~~~v~gL~p~t~Y~frV~A~N~~G~~-~S~~v~~~T  115 (127)
T 2dmk_A           79 QNHYTVHGLQSGTRYIFIVKAINQAGSR-NSEPTRLKT  115 (127)
T ss_dssp             SSEEEEESCCSSCEEEEEEEEEESSCEE-ECCCEEEEC
T ss_pred             CCeEEECCCCCCCEEEEEEEEEeCCCCC-CCcCeEeEe
Confidence            4579999999999999999999999994 333343333

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=98.02  E-value=2.9e-05  Score=57.84  Aligned_cols=166  Identities=12%  Similarity=0.083  Sum_probs=93.4

Q ss_pred             CCeeEEEEEEeCCCCcee---EEEEEec----CCCCCCEE------EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDI---YYQVTIL----SPPGVPNI------LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR   67 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~---~~~~~~~----~~P~~p~~------~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~   67 (197)
                      ++|.|+|.|.|..|....   ...+.+.    .....|.+      .........+.|.|.....+.   .  .+.|...
T Consensus       168 D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~---p--~i~W~k~  242 (384)
T 3kld_A          168 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV---P--TILWRRA  242 (384)
T ss_dssp             GCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESC---C--EEEEEET
T ss_pred             HCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCC---C--cEEEEeC
Confidence            579999999999985432   1122221    00111111      112234667888887632111   1  2445432


Q ss_pred             CCCc--EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC---------------------------
Q psy9139          68 TEDW--QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK---------------------------  118 (197)
Q Consensus        68 ~~~~--~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~---------------------------  118 (197)
                      ++..  ...........+.|.++.......|.|.|.|..|.......+.+...                           
T Consensus       243 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~  322 (384)
T 3kld_A          243 DGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGR  322 (384)
T ss_dssp             TCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEE
T ss_pred             CCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCcc
Confidence            2110  00112233457899999999999999999999886432222211110                           


Q ss_pred             CCCCCCeeecCCCCCcc----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         119 GEDQTDWINIPLSNLDE----ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       119 ~~~~~~w~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      +.+...|..........    .....+.|..+.....-.+.+.|.|.+|....+..+
T Consensus       323 P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L  379 (384)
T 3kld_A          323 PKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAEL  379 (384)
T ss_dssp             SCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEE
Confidence            01156676654322211    113468889999888889999999999987655544

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=98.02  E-value=1.5e-05  Score=62.10  Aligned_cols=159  Identities=11%  Similarity=0.047  Sum_probs=89.9

Q ss_pred             CCeeEEEEEEeCCCCceeE-EEEEecCCCCCCEEEEEeecCCeEEEEeeeC-CCCCccccEEEEEEEeCCCC-----cEE
Q psy9139           1 MVGNYTCLADNIFGKDDIY-YQVTILSPPGVPNILLQSTTTHSISILWKPS-YDGGAIITHYIVSYRDRTED-----WQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~-~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~-~~~~~~i~~y~v~~~~~~~~-----~~~   73 (197)
                      ++|.|+|.|.|..|..... +.+.+...|..|-..........+.|.|... ..+.     ..+.|...+..     ...
T Consensus       202 d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~-----p~i~W~k~g~~l~~~~~~~  276 (527)
T 3qs9_E          202 FGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHG-----FGLTWELENKALEEGNYFE  276 (527)
T ss_dssp             CSSCEEEEEECSSCEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSC-----CCEEEECSSSCCCGGGEEE
T ss_pred             CCEEEEEEEEeCCCcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCC-----eEEEEEECCEECCCCceee
Confidence            4799999999999976544 6777776665332223334567788888863 2221     12445422111     111


Q ss_pred             -EEe-CC----cccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe-----------------------------ecC
Q psy9139          74 -VHV-DA----EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA-----------------------------STK  118 (197)
Q Consensus        74 -~~~-~~----~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~-----------------------------~t~  118 (197)
                       ... ..    ....+.|.++.......|.|.|.|. ...  +..+.+                             ...
T Consensus       277 ~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~-~~~--~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~  353 (527)
T 3qs9_E          277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-PSQ--SALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAY  353 (527)
T ss_dssp             EEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE-EEE--EEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEE
T ss_pred             eeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC-CCc--eEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEec
Confidence             111 11    1234788898888888899888875 110  000000                             000


Q ss_pred             CCCCCCeeecCCCCCcc----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         119 GEDQTDWINIPLSNLDE----ALEMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       119 ~~~~~~w~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      +.+...|.+....+...    .+...+.|.++.....-.+.+.|.|..|....
T Consensus       354 P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~  406 (527)
T 3qs9_E          354 PQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTK  406 (527)
T ss_dssp             SCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEE
T ss_pred             CCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEE
Confidence            11156676543222110    11346778888887777888999999886554

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.00  E-value=1.7e-06  Score=51.98  Aligned_cols=34  Identities=21%  Similarity=0.355  Sum_probs=29.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|+.+..+
T Consensus        63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~   96 (103)
T 2edy_A           63 DTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSI   96 (103)
T ss_dssp             SSCCEECSCCTTCCEEEECCEECSSCBCCCCCCC
T ss_pred             cceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCE
Confidence            4579999999999999999999999999866544

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=97.99  E-value=3.7e-05  Score=53.82  Aligned_cols=156  Identities=10%  Similarity=-0.025  Sum_probs=85.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEE-EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNI-LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~-~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      ++|.|+|.|.|..++.  .+.+.+..+|..... .........+.|.|.....  .+  ...+.|......   +.....
T Consensus        59 d~G~Y~C~~~~~~~s~--~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--~p--~~~v~W~~~g~~---~~~~~~  129 (262)
T 3rjd_A           59 DSGEYRCQRGLSGRSD--PIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKD--KL--VYNVLYYRNGKA---FKFFHW  129 (262)
T ss_dssp             GCEEEEEEESSSCCCC--CEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGG--CC--CEEEEEEETTEE---EEEEEE
T ss_pred             cCeEEEEEEecCCccc--cEEEEEeccceEecCCCeEEecCCeEEEEEEccCC--CC--CceEEEEECCcc---ccccCC
Confidence            5799999999877754  344455443311110 0111346678888876321  11  123444432211   111222


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC-CCC-----------------------------C----CCe
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK-GED-----------------------------Q----TDW  125 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~-~~~-----------------------------~----~~w  125 (197)
                      ...+.|.++.......|.|.+.|..+.......+.+.-. ..+                             .    ..|
T Consensus       130 ~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w  209 (262)
T 3rjd_A          130 NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSF  209 (262)
T ss_dssp             CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEE
T ss_pred             CCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEE
Confidence            456888899988888999999887754322212222111 011                             1    123


Q ss_pred             eecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy9139         126 INIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGST  165 (197)
Q Consensus       126 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~  165 (197)
                      ...............+.|.++.....-.+.+.|.|..|..
T Consensus       210 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~  249 (262)
T 3rjd_A          210 YMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNV  249 (262)
T ss_dssp             EETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred             EeCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence            2222211110123468889999988889999999999964

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=97.98  E-value=6.3e-05  Score=55.83  Aligned_cols=162  Identities=15%  Similarity=0.138  Sum_probs=90.7

Q ss_pred             eeEEEEEEeCCCCcee-E---EEEEecCC-----CCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEE-eCCC
Q psy9139           3 GNYTCLADNIFGKDDI-Y---YQVTILSP-----PGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTE   69 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~-~---~~~~~~~~-----P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~   69 (197)
                      |.|+|.|.|..|.... +   ..+.+..+     |..|.   -.........+.|.|.....+..     .+.|. ...+
T Consensus       178 G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-----~v~W~~~~~~  252 (388)
T 2v5m_A          178 KSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP-----SFRWYKFIEG  252 (388)
T ss_dssp             CCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCC-----EEEEEEECTT
T ss_pred             eeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCC-----EEEEEecCCC
Confidence            9999999998754321 1   23444443     11111   00112335678888864211111     23443 2111


Q ss_pred             Cc-E-EEE----eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC-------------------------
Q psy9139          70 DW-Q-SVH----VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK-------------------------  118 (197)
Q Consensus        70 ~~-~-~~~----~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~-------------------------  118 (197)
                      .. . ...    .......+.|.++.......|.|.|.|..|.......+.+..+                         
T Consensus       253 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~  332 (388)
T 2v5m_A          253 TTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYT  332 (388)
T ss_dssp             SSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEE
T ss_pred             CcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEec
Confidence            10 0 000    0112357899999999999999999998876432222221110                         


Q ss_pred             --CCCCCCeeecCCCCCcccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         119 --GEDQTDWINIPLSNLDEALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       119 --~~~~~~w~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                        +.+...|.........  ....+.|.++.....-.+++.|.|..|....+..+
T Consensus       333 g~p~p~i~W~~~g~~i~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  385 (388)
T 2v5m_A          333 GNPIKTVSWMKDGKAIGH--SESVLRIESVKKEDKGMYQCFVRNDRESAEASAEL  385 (388)
T ss_dssp             EECCCEEEEEETTEECSC--CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred             cccCCeEEEEECCEECcc--CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence              0014667665433322  24579999999988889999999999876654433

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=97.98  E-value=0.00016  Score=51.85  Aligned_cols=169  Identities=12%  Similarity=0.133  Sum_probs=94.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecC------------CCCCCE---EEEEeecCCeEEEEeeeC-CCCCccccEEEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILS------------PPGVPN---ILLQSTTTHSISILWKPS-YDGGAIITHYIVSY   64 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~------------~P~~p~---~~~~~~~~~~~~l~W~~~-~~~~~~i~~y~v~~   64 (197)
                      ++|.|+|.|.|..|... +..+.+..            +|..+.   ..........+.|.|... ..+...+.+|+-..
T Consensus        69 D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~  147 (312)
T 2y23_A           69 DLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEK  147 (312)
T ss_dssp             GCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTE
T ss_pred             CCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCE
Confidence            57999999999999554 45555542            554443   133445567889999875 32222233322111


Q ss_pred             Ee-CCCCcEEEEe-CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC-----------------------------CC---
Q psy9139          65 RD-RTEDWQSVHV-DAEYREFTLTQLKCGTHYKINIKLVNSIGESK-----------------------------PS---  110 (197)
Q Consensus        65 ~~-~~~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~-----------------------------~s---  110 (197)
                      .. ....+..... ......+.|.++.......|.|.+.+..+...                             +.   
T Consensus       148 ~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  227 (312)
T 2y23_A          148 EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE  227 (312)
T ss_dssp             EECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE
T ss_pred             ECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceee
Confidence            11 1122222111 23345589999999888899998865432211                             10   


Q ss_pred             ---------C--ceE--eecCCCC-CCCeeecCCCCCc------ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         111 ---------K--TIA--ASTKGED-QTDWINIPLSNLD------EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       111 ---------~--~~~--~~t~~~~-~~~w~~~~~~~~~------~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                               .  .+.  +...+.+ ...|.........      ......+.|.++.+...-.+.+.|.|..|....+..
T Consensus       228 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~  307 (312)
T 2y23_A          228 YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK  307 (312)
T ss_dssp             EEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEE
T ss_pred             cceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeE
Confidence                     0  000  0111122 5667654322210      011357899999998888999999999997665443

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=97.98  E-value=4.7e-06  Score=49.63  Aligned_cols=30  Identities=20%  Similarity=0.170  Sum_probs=27.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.
T Consensus        57 ~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~   86 (97)
T 3qht_C           57 SSTATISGLSPGVDYTITVYAYYSYYDLYY   86 (97)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEEEETTEEE
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEeCCccCCC
Confidence            457999999999999999999999999874

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=97.97  E-value=1.4e-05  Score=46.64  Aligned_cols=35  Identities=26%  Similarity=0.397  Sum_probs=29.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS-TNKNYVFA  172 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~~  172 (197)
                      ...|++.+|.|++.|.|+|+|.|..|. ++.+..+.
T Consensus        50 ~~~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~   85 (88)
T 1k85_A           50 GTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVS   85 (88)
T ss_dssp             SSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEE
T ss_pred             CCEEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEE
Confidence            347999999999999999999999998 66554443

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=97.97  E-value=0.00011  Score=54.58  Aligned_cols=167  Identities=12%  Similarity=0.091  Sum_probs=91.7

Q ss_pred             eEEEEEEeCCCCceeEEEEEe---cCCCC-------CCEE---EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC--
Q psy9139           4 NYTCLADNIFGKDDIYYQVTI---LSPPG-------VPNI---LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT--   68 (197)
Q Consensus         4 ~y~c~a~n~~G~~~~~~~~~~---~~~P~-------~p~~---~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~--   68 (197)
                      .|+|.|.|..|..........   ..++.       +|.+   .........+.|.|.....+...+.+|+-......  
T Consensus       178 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~  257 (395)
T 1bih_A          178 KYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNP  257 (395)
T ss_dssp             EEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCT
T ss_pred             EEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCC
Confidence            999999999997554332211   11111       1211   12223466788888763222222333321111010  


Q ss_pred             CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC-CCceEeec-------C---------------------C
Q psy9139          69 EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP-SKTIAAST-------K---------------------G  119 (197)
Q Consensus        69 ~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~-s~~~~~~t-------~---------------------~  119 (197)
                      ..............+.|.++.......|.|.+.|..|.... +..+.+..       .                     +
T Consensus       258 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p  337 (395)
T 1bih_A          258 EDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLP  337 (395)
T ss_dssp             TSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEES
T ss_pred             ceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECccc
Confidence            01111011122347999999999999999999998876432 11111110       0                     0


Q ss_pred             CCCCCeeecCCCCCcc---cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         120 EDQTDWINIPLSNLDE---ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       120 ~~~~~w~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      .+...|..........   .....+.|.++.....-.+.+.|.|..|....+..
T Consensus       338 ~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~  391 (395)
T 1bih_A          338 APNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETL  391 (395)
T ss_dssp             CCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred             CCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEE
Confidence            1156777654332211   11337899999999999999999999987665443

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=97.97  E-value=1.7e-05  Score=47.81  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=27.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcC--CCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKND--AGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~--~G~~~~  167 (197)
                      ...++|.+|+|++.|.|+|+|.|.  .|.+++
T Consensus        63 ~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~S   94 (103)
T 3t04_D           63 YSTATISGLKPGVDYTITVYAYDTFFPGYEPN   94 (103)
T ss_dssp             CCEEEECSCCTTCCEEEEEEEESCCCTTCCCS
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEeCCCCCCCCC
Confidence            457999999999999999999999  998883

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}

Probab=97.96  E-value=1.6e-05  Score=52.96  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=59.7

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-----CCcE
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-----EDWQ   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-----~~~~   72 (197)
                      ++|.|+|.+.|..|. ....+.+.+..+|....  ..........+.|.|.....+..     .+.|....     ....
T Consensus        73 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~v~W~~~~~~~~~~~~~  147 (192)
T 2iep_A           73 DDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKP-----SVSWIKGDSALRENSRI  147 (192)
T ss_dssp             GCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCC-----EEEEEETTEECCCCSSE
T ss_pred             cCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCc-----eEEEEeCCEEccCCCcE
Confidence            579999999999987 44556666665543211  11122345667887775221111     24443211     1111


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                        .. .....+.|.++.......|.|.+.|..|..
T Consensus       148 --~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  179 (192)
T 2iep_A          148 --AV-LESGSLRIHNVQKEDAGQYRCVAKNSLGTA  179 (192)
T ss_dssp             --EE-CTTSCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             --EE-ecCCcEEEecCChhhCEEEEEEEEcCCCcE
Confidence              11 123368899999999999999999998865

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=97.96  E-value=4.4e-05  Score=55.00  Aligned_cols=105  Identities=10%  Similarity=0.089  Sum_probs=64.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecC-----------------CCCCCE-E-----EEEeecCCeEEEEeeeCCCCCccc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILS-----------------PPGVPN-I-----LLQSTTTHSISILWKPSYDGGAII   57 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~-----------------~P~~p~-~-----~~~~~~~~~~~l~W~~~~~~~~~i   57 (197)
                      +.|.|+|.|.|..|.....+.+.+..                 ....|. +     .........+.|.|.....+..  
T Consensus       175 d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--  252 (317)
T 2y25_A          175 DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPP--  252 (317)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCC--
T ss_pred             cCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCC--
Confidence            47999999999999887777776431                 112222 1     1222345677888876322221  


Q ss_pred             cEEEEEEEeC-----CCCcEEEEeC-CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          58 THYIVSYRDR-----TEDWQSVHVD-AEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        58 ~~y~v~~~~~-----~~~~~~~~~~-~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                         .+.|...     ......+... .....+.|.++.......|.|.|.|..|....+
T Consensus       253 ---~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~  308 (317)
T 2y25_A          253 ---EVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD  308 (317)
T ss_dssp             ---EEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred             ---EEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEE
Confidence               2444321     1111222212 334579999999999999999999999875433

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}

Probab=97.96  E-value=8.2e-05  Score=50.66  Aligned_cols=105  Identities=14%  Similarity=0.123  Sum_probs=59.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecC------------------CCCCCE----EEEEeecCCeEEEEeeeCCC-CCccc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILS------------------PPGVPN----ILLQSTTTHSISILWKPSYD-GGAII   57 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~------------------~P~~p~----~~~~~~~~~~~~l~W~~~~~-~~~~i   57 (197)
                      ++|.|+|.|.|  |.......+.+..                  ...+|.    +.........+.|.|..... +...+
T Consensus        72 D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i  149 (207)
T 3rbs_A           72 DEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHI  149 (207)
T ss_dssp             GCEEEEEEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEE
T ss_pred             hCEEEEEEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEE
Confidence            47999999999  6555444433210                  002343    22333456788899886332 22234


Q ss_pred             cEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          58 THYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        58 ~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .||+-........  ..........+.|.++.+.....|.|.|.|..|....
T Consensus       150 ~W~k~g~~l~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~  199 (207)
T 3rbs_A          150 VWYKDEREISVDE--KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKS  199 (207)
T ss_dssp             EEEETTEEECCCC--CCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEE
T ss_pred             EEEECCEECCCCC--ceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEE
Confidence            4332111111111  0112233446899999999999999999999986543

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A

Probab=97.96  E-value=1.5e-05  Score=54.44  Aligned_cols=48  Identities=19%  Similarity=0.208  Sum_probs=37.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEE--EeecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILL--QSTTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~--~~~~~~~~~l~W~~   49 (197)
                      ++|.|+|.|.| .|.....+.+.|..+|..|....  .......+.|.|..
T Consensus        91 D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~  140 (222)
T 3sbw_C           91 DAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQA  140 (222)
T ss_dssp             GCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEE
T ss_pred             cCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEe
Confidence            47999999999 67777788889988888876333  44566788999886

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=97.95  E-value=1e-05  Score=55.45  Aligned_cols=89  Identities=10%  Similarity=0.062  Sum_probs=41.4

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCC----CCcc--------ccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCE
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYD----GGAI--------ITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTH   93 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~----~~~~--------i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~   93 (197)
                      ..++||.+.+... .++|.|.|.+|..    .++.        ...|.|.|......-.........+.+.|.+|+|++.
T Consensus       106 t~i~PP~v~v~~~-~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  184 (211)
T 3g9v_A          106 TKIDPPVMNITQV-NGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSS  184 (211)
T ss_dssp             CBCCCCEEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------CEEEEEESSCCCC---------
T ss_pred             CccCCCEEEEEEc-CCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccEEEEEecCCcEEEEecCCCCCe
Confidence            5568887665544 4589999999864    2221        3569998863221111112233456788999999999


Q ss_pred             EEEEEEEEcC--CcCCCCCCceEe
Q psy9139          94 YKINIKLVNS--IGESKPSKTIAA  115 (197)
Q Consensus        94 y~~~v~a~~~--~g~~~~s~~~~~  115 (197)
                      |.++|+|...  ...+.+|....+
T Consensus       185 Ycv~V~a~~~~~~~~s~~S~~~C~  208 (211)
T 3g9v_A          185 YCVVAEIYQPMLDRRSQRSEERCV  208 (211)
T ss_dssp             -CEEEEEEETTTTEECCCCCC---
T ss_pred             EEEEEEEEeCCCCCcCCCCCCEeE
Confidence            9999999853  223556655443

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=97.95  E-value=0.00051  Score=49.97  Aligned_cols=87  Identities=16%  Similarity=0.166  Sum_probs=56.2

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCC-CccccEEEEEEEeCC-CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDG-GAIITHYIVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~-~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ...|.||. +.+. .....+.|.|.+|... ...-..|.|+|+... ..|....+.  .+.+.+ .|.|++.|.++|+|.
T Consensus       218 iVkp~PP~nL~v~-~~~~~l~v~W~~P~~~~~~~~L~Yevryr~~~~~~~~~~~~~--~~~~~l-~l~p~~~Y~vqVR~k  293 (317)
T 3qt2_A          218 IDQINPPLNVTAE-IEGTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLM--TNAFIS-IIDDLSKYDVQVRAA  293 (317)
T ss_dssp             HBCCCCCEEEEEE-EETTEEEEEEECCSSSSCGGGEEEEEEEEETTTCCEEEEEES--SSEEEE-ECCTTCCEEEEEEEE
T ss_pred             cCcCCCCceeEEE-EeCCcEEEEECCCCcccccCceEEEEEEEeCCCCcceEEEEe--eeEEEe-ecCCCCEEEEEEEEe
Confidence            47899996 6655 4457999999987521 112357999998533 333332332  345655 499999999999998


Q ss_pred             cCC-----c-CCCCCCceEe
Q psy9139         102 NSI-----G-ESKPSKTIAA  115 (197)
Q Consensus       102 ~~~-----g-~~~~s~~~~~  115 (197)
                      ...     | .+.+|.++.+
T Consensus       294 ~~~~~~~~g~WSeWS~~~~~  313 (317)
T 3qt2_A          294 VSSMCREAGLWSEWSQPIYV  313 (317)
T ss_dssp             ECTTTSSCCCCCCCCCCEEE
T ss_pred             ecCCCCCCCCcCCCCCCEEE
Confidence            432     2 3555655544

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=97.95  E-value=1.1e-05  Score=60.21  Aligned_cols=104  Identities=13%  Similarity=0.097  Sum_probs=64.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc----EEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW----QSV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~----~~~   74 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|....  ..........+.|.|.....+..     .+.|...+...    ...
T Consensus       286 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-----~v~W~~~g~~~~~~~~~~  360 (404)
T 3p3y_A          286 DSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKP-----TVQWMVNGEPLQSAPPNP  360 (404)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCC-----EEEEEETTEEGGGSCCCT
T ss_pred             HCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCC-----ceEEEECCEecCCCCCCc
Confidence            57999999999999988888888877652211  11122345678888876322111     24443211000    000


Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ........+.|.++.......|.|.|.|..|....
T Consensus       361 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  395 (404)
T 3p3y_A          361 NREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLA  395 (404)
T ss_dssp             TEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEE
T ss_pred             eEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEE
Confidence            00112347899999999999999999999987543

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=97.94  E-value=4.1e-05  Score=52.95  Aligned_cols=105  Identities=17%  Similarity=0.222  Sum_probs=64.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC-CCCEEE------EEeecCCeEEEEeeeCCCCCccccEEEEEEEe----C--
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP-GVPNIL------LQSTTTHSISILWKPSYDGGAIITHYIVSYRD----R--   67 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P-~~p~~~------~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~----~--   67 (197)
                      ++|.|+|.|.|..|.....+.+.+...+ .+|.+.      ........+.|.|.....+..     .+.|..    .  
T Consensus        83 d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p-----~v~W~~~~~~~g~  157 (241)
T 3grw_A           83 DRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-----HIQWLKHVEVNGS  157 (241)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC-----EEEEEEECCSSSC
T ss_pred             cCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC-----EEEEEEcccCCCc
Confidence            4799999999999988888888776543 333321      112235678888877332222     233332    1  


Q ss_pred             ----CCC-cEEEE------eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          68 ----TED-WQSVH------VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        68 ----~~~-~~~~~------~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                          .+. .....      .......+.|.++.......|.|.+.|..|....+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~  211 (241)
T 3grw_A          158 KVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKA  211 (241)
T ss_dssp             SSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred             ccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEE
Confidence                111 11100      01124468899999989999999999988866433

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=97.94  E-value=1.3e-05  Score=47.79  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=28.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|++..
T Consensus        54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p~~   85 (98)
T 3tes_A           54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSNPLS   85 (98)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEETTEEBCCEE
T ss_pred             cCEEEECCCCCCCEEEEEEEEEeCCcccCCEE
Confidence            55799999999999999999999999888643

>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}

Probab=97.93  E-value=7.6e-05  Score=49.64  Aligned_cols=109  Identities=12%  Similarity=0.098  Sum_probs=63.6

Q ss_pred             CCeeEEEEEEeCCCC--ceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEE
Q psy9139           1 MVGNYTCLADNIFGK--DDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~--~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~   73 (197)
                      ++|.|+|.|.|..|.  .+..+.+.+...+.+|.+....    .....+.|.|....  . + .  .+.|. +.......
T Consensus        63 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~--~-~-~--~~~w~k~g~~~~~~  136 (184)
T 2gi7_A           63 LAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRY--G-F-D--QFALYKEGDPAPYK  136 (184)
T ss_dssp             GCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSS--C-C-C--EEEEEECCCCTTSC
T ss_pred             hCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCC--C-C-c--EEEEEECCCcCcce
Confidence            579999999998873  3456677777666666643322    23578899998532  1 2 1  23343 22111100


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEe
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAA  115 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~  115 (197)
                      .........+.|.++.......|.|.|.|..+.   +..+..+.+
T Consensus       137 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l  181 (184)
T 2gi7_A          137 NPERWYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLEL  181 (184)
T ss_dssp             CCCEEEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEE
T ss_pred             ecCCCceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEE
Confidence            000112234567778888888999999997643   344544443

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=97.93  E-value=5.7e-06  Score=51.29  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=29.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+++.+|.|++.|.|+|+|.|..|.|+++.
T Consensus        73 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~  104 (120)
T 2yux_A           73 RTSATITELVIGNEYYFRVFSENMCGLSEDAT  104 (120)
T ss_dssp             SSCCEECCCCSSEEEEEEECCCSSSCSCSSCE
T ss_pred             cCEEEECCCCCCCEEEEEEEEeeCCcCCCCcc
Confidence            55799999999999999999999999998654

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=97.92  E-value=0.00065  Score=49.37  Aligned_cols=166  Identities=13%  Similarity=0.014  Sum_probs=88.0

Q ss_pred             CCe-eEEEEEEeCCCCceeEEEEEe-cCCCCCCEEE--EEeecCCeEEEEeeeCCCC-CccccEEEEEEEeCCCCcEEEE
Q psy9139           1 MVG-NYTCLADNIFGKDDIYYQVTI-LSPPGVPNIL--LQSTTTHSISILWKPSYDG-GAIITHYIVSYRDRTEDWQSVH   75 (197)
Q Consensus         1 ~~g-~y~c~a~n~~G~~~~~~~~~~-~~~P~~p~~~--~~~~~~~~~~l~W~~~~~~-~~~i~~y~v~~~~~~~~~~~~~   75 (197)
                      ++| .|+|.|.|..|.........+ ..+|......  ........+.|.|.....+ ...+.+|+-.............
T Consensus       100 D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~  179 (329)
T 3oq3_B          100 DSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ  179 (329)
T ss_dssp             GGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE
T ss_pred             hCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec
Confidence            478 899999999997554443333 3344322211  1112356889998654322 2223322211111000101111


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcC--CcCCCCC----CceEeecCC------------------------------
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNS--IGESKPS----KTIAASTKG------------------------------  119 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~--~g~~~~s----~~~~~~t~~------------------------------  119 (197)
                         ....+.|.++.......|.|.+.|.  .|.....    ..+.+...+                              
T Consensus       180 ---~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p  256 (329)
T 3oq3_B          180 ---SGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTS  256 (329)
T ss_dssp             ---ETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETT
T ss_pred             ---CCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECC
Confidence               1367889999998889999999986  4432221    111111111                              


Q ss_pred             ---CC-CCCeeecCCCCCcc-c------------ccceEEEcCCCCCCeE-EEEEEEEcCCCCCCcce
Q psy9139         120 ---ED-QTDWINIPLSNLDE-A------------LEMPLVIENLLPATRY-ELTISAKNDAGSTNKNY  169 (197)
Q Consensus       120 ---~~-~~~w~~~~~~~~~~-~------------~~~~~~i~~L~p~t~Y-~v~V~a~n~~G~~~~~~  169 (197)
                         .+ ...|.......... .            ....+.|.++.....- .+.+.|.|..|....+.
T Consensus       257 ~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~  324 (329)
T 3oq3_B          257 LLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTT  324 (329)
T ss_dssp             CCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEE
T ss_pred             CCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEE
Confidence               01 12676544331110 0            1345788888887777 88899999988765443

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=97.92  E-value=1.8e-05  Score=47.12  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=28.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|.|++.|.|+|+|.|..|.|++..
T Consensus        54 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~   85 (98)
T 3teu_A           54 STSVTITGLTPGVEYVVSVYALKDNQESPPLV   85 (98)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             cCEEEecCCCCCCEEEEEEEEEeCCCCCCCeE
Confidence            55799999999999999999999999988643

>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=97.91  E-value=0.00067  Score=47.32  Aligned_cols=109  Identities=10%  Similarity=0.073  Sum_probs=67.6

Q ss_pred             CCeeEEEEEEeCCCC--ceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE-E
Q psy9139           1 MVGNYTCLADNIFGK--DDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-S   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~--~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~-~   73 (197)
                      ++|.|+|.+.|..|.  .+..+.+.+...+..|.+....    .....+.|.|....  ..  .  .+.|...+.... .
T Consensus        71 DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~--~~--~--~~~w~k~g~~~~~~  144 (242)
T 1p6f_A           71 MAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT--AT--S--MFLLLKEGRSSHVQ  144 (242)
T ss_dssp             GCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTT--SC--S--EEEEEECSSSCEEE
T ss_pred             cCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCC--CC--C--EEEEEECCCccCcc
Confidence            579999999987653  3456677777655566543322    35678999998643  21  1  233432222211 2


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCC-cCCCCCCceEe
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSI-GESKPSKTIAA  115 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~-g~~~~s~~~~~  115 (197)
                      .........+.|.++.......|+|.+.|.. ..+..+..+.+
T Consensus       145 ~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l  187 (242)
T 1p6f_A          145 RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL  187 (242)
T ss_dssp             EEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEE
T ss_pred             ccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEE
Confidence            2234456678999999988999999998864 23445555443

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G

Probab=97.91  E-value=6.5e-06  Score=55.61  Aligned_cols=104  Identities=16%  Similarity=0.233  Sum_probs=64.9

Q ss_pred             CCeeEEEEEEeCCCC--ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE----
Q psy9139           1 MVGNYTCLADNIFGK--DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ----   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~--~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~----   72 (197)
                      ++|.|+|.|.|..|.  .+..+.+.+..+|..+.  ..........+.|.|....  +.|..  .+.|........    
T Consensus        79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~--~~p~~--~v~W~~~~~~~~~~~~  154 (209)
T 1nbq_A           79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQD--GSPPS--EYTWFKDGIVMPTNPK  154 (209)
T ss_dssp             SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCS--CBSCC--EEEEEETTCCCCSCSS
T ss_pred             HCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCC--CCCCc--eeEEEECCeeCCCccc
Confidence            579999999999773  34566777777776654  1112244677888887522  11211  355542211110    


Q ss_pred             --------EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          73 --------SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        73 --------~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                              ..........+.|.++.......|.|.+.|..|...
T Consensus       155 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~  198 (209)
T 1nbq_A          155 STRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM  198 (209)
T ss_dssp             SSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred             cceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence                    001122445789999988888899999999998763

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=97.91  E-value=1.3e-05  Score=59.58  Aligned_cols=103  Identities=17%  Similarity=0.156  Sum_probs=64.1

Q ss_pred             CCeeEEEEEEeCCCCcee-EEEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDI-YYQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV   76 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~-~~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~   76 (197)
                      +.|.|+|.|.|..|.... .+.+.+..+|....   ..........+.|.|.....+...+.||+-......+ ..  ..
T Consensus       281 d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~--~~  357 (395)
T 1bih_A          281 DEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RA--TV  357 (395)
T ss_dssp             GCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SE--EE
T ss_pred             hCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ce--EE
Confidence            579999999999998655 77888876653221   1122344567888887632222223332211111111 11  11


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                        ....+.|.++.......|.|.|.|..|...
T Consensus       358 --~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~  387 (395)
T 1bih_A          358 --TDSGLVIKGVKNGDKGYYGCRATNEHGDKY  387 (395)
T ss_dssp             --ETTEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred             --ECCEEEEeeCCcccCEEEEEEEEccCCCce
Confidence              123799999999999999999999998654

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=97.90  E-value=3.3e-05  Score=57.26  Aligned_cols=165  Identities=12%  Similarity=0.085  Sum_probs=94.2

Q ss_pred             CCeeEEEEEEeCCCCcee-----EEEEEecC---CCCCCEE------EEEeecCCeEEEEeeeCCCCCccccEEEEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDI-----YYQVTILS---PPGVPNI------LLQSTTTHSISILWKPSYDGGAIITHYIVSYRD   66 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~-----~~~~~~~~---~P~~p~~------~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~   66 (197)
                      +.|.|+|.|.|..|....     .+.+.+..   ...+|.+      .........+.|.|.....+.   .  .+.|..
T Consensus       169 d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~---~--~i~W~~  243 (382)
T 1cs6_A          169 DLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPV---P--QIKWRK  243 (382)
T ss_dssp             GCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESC---C--EEEEEE
T ss_pred             cCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCC---C--EEEEEE
Confidence            479999999999864322     23343322   1112221      122234667888887532111   1  355543


Q ss_pred             CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec------C---------------------C
Q psy9139          67 RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST------K---------------------G  119 (197)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t------~---------------------~  119 (197)
                      ....... ........+.|.++.......|.|.+.|..|.......+.+..      .                     +
T Consensus       244 ~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p  322 (382)
T 1cs6_A          244 LDGSQTS-KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKP  322 (382)
T ss_dssp             CCSCCSC-CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEES
T ss_pred             CCccccc-EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeec
Confidence            2221110 1223456789999999889999999999887643222221111      0                     0


Q ss_pred             CCCCCeeecCCCCCcc----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         120 EDQTDWINIPLSNLDE----ALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       120 ~~~~~w~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .+...|..........    .....+.|.++.......+++.|.|..|....+..+
T Consensus       323 ~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  378 (382)
T 1cs6_A          323 RPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAEL  378 (382)
T ss_dssp             CCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             CCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEE
Confidence            1145676544322211    113468999999998999999999999987655444

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*

Probab=97.90  E-value=5.8e-05  Score=51.44  Aligned_cols=104  Identities=8%  Similarity=0.050  Sum_probs=56.6

Q ss_pred             CCeeEEEEEEeCCCCcee-EEEEEecCCCCCCEEEE------EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--c
Q psy9139           1 MVGNYTCLADNIFGKDDI-YYQVTILSPPGVPNILL------QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--W   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~-~~~~~~~~~P~~p~~~~------~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--~   71 (197)
                      ++|.|+|.|.|..+.... .+.+.+.. +.+|.+.+      .......+.|.|.....+..+   +.+.|......  .
T Consensus        75 D~G~Y~C~a~n~~~~~~s~~~~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~---~~i~W~~~g~~~~~  150 (213)
T 2x1w_L           75 YAGMVFCEAKINDESYQSIMYIVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVG---IDFNWEYPSSKHQH  150 (213)
T ss_dssp             TCSEEEEEEC----CEECCCEEEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBC---CEEEEECSCSSCCS
T ss_pred             cCceEEEEEEECCeeEEEEEEEEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCc---eEEEEEecCCccce
Confidence            589999999996554322 35565543 23332221      223456788888764221111   23555522211  1


Q ss_pred             EEE---EeC--------CcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          72 QSV---HVD--------AEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        72 ~~~---~~~--------~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...   ...        .....+.|.++.......|.|.|.|..|...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~  198 (213)
T 2x1w_L          151 KKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK  198 (213)
T ss_dssp             EEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred             EEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEE
Confidence            111   111        1133589999999999999999999987653

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=97.88  E-value=5.1e-05  Score=54.72  Aligned_cols=104  Identities=8%  Similarity=0.039  Sum_probs=59.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec-CCCCC---CE--EEEEeecCCeEEEEeeeC------CCCCccccEEEEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL-SPPGV---PN--ILLQSTTTHSISILWKPS------YDGGAIITHYIVSYRDRT   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~-~~P~~---p~--~~~~~~~~~~~~l~W~~~------~~~~~~i~~y~v~~~~~~   68 (197)
                      ++|.|+|.|.|..|.....+.+.+. .+|..   +.  ..........+.|.|...      ..+...+.||+-......
T Consensus        73 D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~  152 (315)
T 1itb_B           73 DSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL  152 (315)
T ss_dssp             GCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC
T ss_pred             hCEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC
Confidence            4799999999999987666655543 33332   11  222334567889999752      122222443321111111


Q ss_pred             CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE-cCCcCC
Q psy9139          69 EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV-NSIGES  107 (197)
Q Consensus        69 ~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~-~~~g~~  107 (197)
                      ....   .......+.|.++.......|.|.+. |..|..
T Consensus       153 ~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~  189 (315)
T 1itb_B          153 DNIH---FSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQ  189 (315)
T ss_dssp             CSSS---EEEETTEEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred             ccce---EeecCceEEEEeceehhCcEEEEEEEcCCCCcE
Confidence            1111   11123478999999999999999998 666643

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=97.86  E-value=0.00018  Score=52.17  Aligned_cols=166  Identities=13%  Similarity=0.105  Sum_probs=90.3

Q ss_pred             CCeeEEEE-EEeCCCCceeEEEEEecCCCCCCE------EEEEee-cCCeEEEEee-eCCCCCccccEEEEEEEeC-CCC
Q psy9139           1 MVGNYTCL-ADNIFGKDDIYYQVTILSPPGVPN------ILLQST-TTHSISILWK-PSYDGGAIITHYIVSYRDR-TED   70 (197)
Q Consensus         1 ~~g~y~c~-a~n~~G~~~~~~~~~~~~~P~~p~------~~~~~~-~~~~~~l~W~-~~~~~~~~i~~y~v~~~~~-~~~   70 (197)
                      +.|.|+|. +.|..|.....+.+.+..+|....      +.+... ....+.|.|. ....+..     .+.|... .+.
T Consensus       103 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~-----~i~W~~~~~~~  177 (331)
T 3u83_A          103 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPS-----VVSWETRLKGE  177 (331)
T ss_dssp             GCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCC-----EEEEEESSCCE
T ss_pred             cCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCc-----eEEEEcCCCCc
Confidence            47999998 667778777888888887764321      222211 1256888886 3222222     2333321 111


Q ss_pred             cEE--EEeCCc----ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe--------ecC------------------
Q psy9139          71 WQS--VHVDAE----YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA--------STK------------------  118 (197)
Q Consensus        71 ~~~--~~~~~~----~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~--------~t~------------------  118 (197)
                      ...  ......    ...+.|..........|.|.+.|..|....+..+.+        ...                  
T Consensus       178 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~  257 (331)
T 3u83_A          178 AEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKAD  257 (331)
T ss_dssp             EEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEE
T ss_pred             cccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCc
Confidence            111  111111    133666666666667777888887654321111111        110                  


Q ss_pred             --CCCC-CCeeecCCCCCcc--cccceEEEc-CCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         119 --GEDQ-TDWINIPLSNLDE--ALEMPLVIE-NLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       119 --~~~~-~~w~~~~~~~~~~--~~~~~~~i~-~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                        +.+. ..|..........  .....+.|. .+.....-.+++.|.|..|....+..+
T Consensus       258 g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l  316 (331)
T 3u83_A          258 ANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEV  316 (331)
T ss_dssp             EESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEE
Confidence              0114 7787655443221  124568888 788888889999999999876544433

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=2.1e-05  Score=47.38  Aligned_cols=30  Identities=13%  Similarity=0.372  Sum_probs=27.1

Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         140 PLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .++|.+|+|++.|.|+|+|.|..|.+.+..
T Consensus        62 ~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~   91 (104)
T 2dkm_A           62 EVLLDGLEPGRDYEVSVQSLRGPEGSEARG   91 (104)
T ss_dssp             EEEEESCCTTCCEEEEEEEECSSSBCCCEE
T ss_pred             EEEECCCCCCCEEEEEEEEECCCCCCCCEE
Confidence            799999999999999999999988887643

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=97.85  E-value=0.0001  Score=52.41  Aligned_cols=106  Identities=12%  Similarity=0.108  Sum_probs=67.1

Q ss_pred             CCeeEEEEEEeCCCCc--eeEEEEEecCCCCCCE----EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----CC
Q psy9139           1 MVGNYTCLADNIFGKD--DIYYQVTILSPPGVPN----ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----TE   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~--~~~~~~~~~~~P~~p~----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~~   69 (197)
                      +.|.|+|.|.|..+..  ...+.+.+..+|....    ..........+.|.|.....+..     .+.|...     ..
T Consensus       164 d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~v~W~~~g~~~~~~  238 (291)
T 2wim_A          164 DEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP-----AISWFRNGKLIEEN  238 (291)
T ss_dssp             GCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCC-----EEEEEETTEECCCT
T ss_pred             hCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCC-----eEEEEECCEECcCC
Confidence            4799999999998653  3455667777765432    12333456788999986432211     2444421     11


Q ss_pred             CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          70 DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        70 ~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ..  .........+.|.++.......|.|.|.|..|....+..+
T Consensus       239 ~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l  280 (291)
T 2wim_A          239 EK--YILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL  280 (291)
T ss_dssp             TT--EEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred             cc--EEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEE
Confidence            11  1223345679999999999999999999999876554433

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=97.85  E-value=0.00036  Score=50.37  Aligned_cols=101  Identities=10%  Similarity=0.125  Sum_probs=62.5

Q ss_pred             CCeeEEEEEEeCCC-----CceeEEEEEecCCCCCCEEEEE----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-
Q psy9139           1 MVGNYTCLADNIFG-----KDDIYYQVTILSPPGVPNILLQ----STTTHSISILWKPSYDGGAIITHYIVSYRDRTED-   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~~~~~~~~~~~~~P~~p~~~~~----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-   70 (197)
                      ++|.|+|.|.|..+     ..+..+.+.+...+.+|.+...    ......+.|.|....  . + ..|.+ |++.... 
T Consensus        85 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~--~-~-~~~~w-~k~g~~~~  159 (316)
T 3vh8_G           85 HAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDI--M-F-EHFFL-HKEGISKD  159 (316)
T ss_dssp             GCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESS--C-C-SEEEE-EETTCCSC
T ss_pred             cCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCC--C-C-cEEEE-EECCCccc
Confidence            57999999987432     3445677778777666653322    235678899998742  1 1 12222 2222111 


Q ss_pred             cEE----EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          71 WQS----VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        71 ~~~----~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ...    .........+.|.++.......|.|.|.|..|.
T Consensus       160 ~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~  199 (316)
T 3vh8_G          160 PSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP  199 (316)
T ss_dssp             CEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred             cceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence            111    111223456899999999999999999998774

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=97.84  E-value=0.00027  Score=49.55  Aligned_cols=138  Identities=9%  Similarity=0.081  Sum_probs=73.8

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC---CCCcEEEE----eCCcccEEEECC--CCCCCEEEEEEEEEcC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR---TEDWQSVH----VDAEYREFTLTQ--LKCGTHYKINIKLVNS  103 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~---~~~~~~~~----~~~~~~~~~i~~--L~p~~~y~~~v~a~~~  103 (197)
                      +.+.......+...|+++.. .. -..|.+.+...   ...|..+.    .......+.+..  +.....|.+.|.+  .
T Consensus        43 l~C~~~~~~~l~CtW~~g~~-~~-~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~V~~--~  118 (247)
T 2erj_C           43 VQCFVFNVEYMNCTWQSSSE-PQ-PTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--P  118 (247)
T ss_dssp             CEEEEETTSEEEEECCTTSS-SS-CCCCEEEEEESSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEEEEC--S
T ss_pred             CEEEECCCCEEEEEEcCCCC-CC-CeeEEEEEEECCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEEEEE--C
Confidence            77777788899999998652 11 24577777522   23454442    123334555533  4456678887754  2


Q ss_pred             CcCCCCCCceEe-----ecCCCC-------------CCCeeecCCC-------------C-Ccc----cccceEEEcCCC
Q psy9139         104 IGESKPSKTIAA-----STKGED-------------QTDWINIPLS-------------N-LDE----ALEMPLVIENLL  147 (197)
Q Consensus       104 ~g~~~~s~~~~~-----~t~~~~-------------~~~w~~~~~~-------------~-~~~----~~~~~~~i~~L~  147 (197)
                      .|.... ....+     ..+.+|             ...|......             . .-+    .....+.|.+|.
T Consensus       119 ~g~~~s-~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~~~~~~~l~~L~  197 (247)
T 2erj_C          119 REPRRQ-ATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVD  197 (247)
T ss_dssp             SCTTCE-EEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEECSSCEEEESCCC
T ss_pred             CCcccc-ceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecCCceEEEecCCC
Confidence            332211 11111     011122             1223221100             0 000    114578999999


Q ss_pred             CCCeEEEEEEEEcCCC------CCCcceEEEEee
Q psy9139         148 PATRYELTISAKNDAG------STNKNYVFATLS  175 (197)
Q Consensus       148 p~t~Y~v~V~a~n~~G------~~~~~~~~~t~~  175 (197)
                      |++.|.|+|+|....|      +|+.+..+...+
T Consensus       198 p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t  231 (247)
T 2erj_C          198 GQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS  231 (247)
T ss_dssp             TTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC
T ss_pred             CCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEEC
Confidence            9999999999998543      355565554444

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=97.84  E-value=2.6e-05  Score=46.71  Aligned_cols=27  Identities=22%  Similarity=0.364  Sum_probs=25.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.
T Consensus        59 ~t~~~l~~L~p~t~Y~~~V~A~~~~~~   85 (101)
T 3k2m_C           59 SSTATISGLSPGVDYTITVYAWGEDSA   85 (101)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEEECTT
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence            457999999999999999999999998

>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*

Probab=97.83  E-value=0.00018  Score=48.28  Aligned_cols=101  Identities=14%  Similarity=0.046  Sum_probs=56.7

Q ss_pred             CCeeEEEEEEeCCCCc-----eeEEEEEecCCCCCCEEEEEe-ecCCeEEEEeeeC-CCCCccccEEEEEEEeCCC----
Q psy9139           1 MVGNYTCLADNIFGKD-----DIYYQVTILSPPGVPNILLQS-TTTHSISILWKPS-YDGGAIITHYIVSYRDRTE----   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-----~~~~~~~~~~~P~~p~~~~~~-~~~~~~~l~W~~~-~~~~~~i~~y~v~~~~~~~----   69 (197)
                      ++|.|+|.|.|..|..     ...+.+.+..++..|.+.... .....+.|.|... ..+..     .+.|.....    
T Consensus        76 D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p-----~i~W~k~g~~l~~  150 (201)
T 1dr9_A           76 DEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEP-----HLSWLENGEELNA  150 (201)
T ss_dssp             GCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCE-----EEEEEESSCEECC
T ss_pred             hCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCC-----EEEEEECCEECcc
Confidence            4799999999988754     356777888877777744333 4466788988863 22222     344542211    


Q ss_pred             CcEEEEeCCcccEE---EECCCCCCCEEEEEEEEEcCCcC
Q psy9139          70 DWQSVHVDAEYREF---TLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        70 ~~~~~~~~~~~~~~---~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .-...........+   .+..+.......|.|.|.|..|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~  190 (201)
T 1dr9_A          151 INTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR  190 (201)
T ss_dssp             SEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred             ccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence            11111122111111   11223344566888999988764

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=97.83  E-value=1.9e-05  Score=48.24  Aligned_cols=32  Identities=28%  Similarity=0.516  Sum_probs=29.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN   32 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~   32 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|.+|.
T Consensus        74 D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~P~  105 (114)
T 2cqv_A           74 HCGCYTLLVENKLGSRQAQVNLTVVDKPDPPA  105 (114)
T ss_dssp             TCEEEEEEEECSSCEEECCEEEEEECSCSCCC
T ss_pred             cCEEEEEEEEECCCcEEEEEEEEEECCCCCCC
Confidence            58999999999999988999999999888874

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=97.81  E-value=2.9e-05  Score=60.22  Aligned_cols=164  Identities=10%  Similarity=0.058  Sum_probs=93.4

Q ss_pred             CCe-eEEEEEEeCCCCc-eeEEEEEecC-CCCCCEEE-----EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--
Q psy9139           1 MVG-NYTCLADNIFGKD-DIYYQVTILS-PPGVPNIL-----LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--   70 (197)
Q Consensus         1 ~~g-~y~c~a~n~~G~~-~~~~~~~~~~-~P~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--   70 (197)
                      +.| .|+|.|.|..|.. +..+.+.+.. +..+|.+.     ........+.|.|.....+. +   ..+.|......  
T Consensus       179 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~-p---~~i~W~~~~~~~~  254 (524)
T 2ec8_A          179 YHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSS-S---VYSTWKRENSQTK  254 (524)
T ss_dssp             GTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESST-T---CEEEEEETTCSCC
T ss_pred             hCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCC-c---EEEEEEeCCCCCc
Confidence            468 9999999998865 3366776652 22334321     23345677888887642111 1   12445432221  


Q ss_pred             --cEE-EEeC-----CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC------------------------
Q psy9139          71 --WQS-VHVD-----AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK------------------------  118 (197)
Q Consensus        71 --~~~-~~~~-----~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~------------------------  118 (197)
                        +.. ....     .....+.|.++.......|.|.+.|..|.......+.+...                        
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~  334 (524)
T 2ec8_A          255 LQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLI  334 (524)
T ss_dssp             CCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEE
T ss_pred             cccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEE
Confidence              111 1111     22456889999999999999999998875432222211100                        


Q ss_pred             ------CCCC-CCeeecCCCCCccc-------------ccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         119 ------GEDQ-TDWINIPLSNLDEA-------------LEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       119 ------~~~~-~~w~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                            +.+. ..|...........             ....+.|.++.....-.+++.|.|..|....+
T Consensus       335 C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~  404 (524)
T 2ec8_A          335 VEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIA  404 (524)
T ss_dssp             EEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred             EEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEE
Confidence                  0014 67876544332210             13468899999988889999999999875443

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=97.81  E-value=0.00058  Score=49.29  Aligned_cols=108  Identities=12%  Similarity=0.114  Sum_probs=61.7

Q ss_pred             CCeeEEEEEEeCCCCc-----eeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-C
Q psy9139           1 MVGNYTCLADNIFGKD-----DIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTE-D   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-----~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~   70 (197)
                      +.|.|+|.|.|..|..     +....+.+...+.+|.+....    .....+.|.|....    +..  .+.|..... .
T Consensus       185 D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~----~~~--~~~W~k~g~~~  258 (316)
T 3vh8_G          185 LAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS----SYD--MYHLSREGGAH  258 (316)
T ss_dssp             GCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS----CCS--EEEEEETTSSC
T ss_pred             hCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC----CCc--EEEEEECCCcC
Confidence            4799999999998852     456677777777777644432    24677899998742    112  244442222 1


Q ss_pred             cEEE---Ee--CCcccEEEECCCCCCCEEEEEEEEEcCCcC---CCCCCceEee
Q psy9139          71 WQSV---HV--DAEYREFTLTQLKCGTHYKINIKLVNSIGE---SKPSKTIAAS  116 (197)
Q Consensus        71 ~~~~---~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~---~~~s~~~~~~  116 (197)
                      ....   ..  ......+.|.++.  ....|.|.+.|..+.   +..|..+.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~  310 (316)
T 3vh8_G          259 ERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVS  310 (316)
T ss_dssp             CEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred             CCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence            1111   11  1123568888887  678889999997764   4555555443

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.80  E-value=5.2e-05  Score=46.51  Aligned_cols=31  Identities=16%  Similarity=0.236  Sum_probs=27.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.+.+.
T Consensus        58 ~t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~   88 (115)
T 2cuh_A           58 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPA   88 (115)
T ss_dssp             CSEEEECSCCSSSEEEEEEEEEETTEECCCE
T ss_pred             ccEEEEeCCCCCCEEEEEEEEEeCCCcCCCE
Confidence            4579999999999999999999998877754

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}

Probab=97.80  E-value=9.7e-05  Score=49.35  Aligned_cols=101  Identities=10%  Similarity=-0.028  Sum_probs=59.2

Q ss_pred             CCeeEEEEEEeCCCCce-eEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDD-IYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~-~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      ++|.|+|.|.|..|... ..+.+.+..+|....  ..........+.|.|.....+. +   ..+.|.............
T Consensus        79 d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p---~~v~W~~~~~~~~~~~~~  154 (195)
T 2c5d_C           79 DTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPE-P---VDLLWLQDAVPLATAPGH  154 (195)
T ss_dssp             TCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSC-C---CEEEEEESSCBSSSSTTS
T ss_pred             CCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCC-C---CEEEEEECCEeccCCCCc
Confidence            57999999999988643 347788877763211  1122234667888887633221 1   134554222110000000


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .....+.|.++..  ...|.|.|.|..|..
T Consensus       155 ~~~~~L~i~~~~d--~G~Y~C~a~N~~g~~  182 (195)
T 2c5d_C          155 GPQRSLHVPGLNK--TSSFSCEAHNAKGVT  182 (195)
T ss_dssp             SCCEEEEECCCSS--CEEEEEEEEETTEEE
T ss_pred             CCCCeEEEccccc--CceEEEEEEcCCCce
Confidence            2455688888873  578899999998865

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*

Probab=97.80  E-value=0.00015  Score=49.23  Aligned_cols=104  Identities=12%  Similarity=0.073  Sum_probs=60.5

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCC-CCCCE--EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeCCCC-----
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSP-PGVPN--ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRTED-----   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~-P~~p~--~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~~-----   70 (197)
                      ++|.|+|.|.|..|.. ...+.+.+... |....  ..........+.|.|.... .+..     .+.|......     
T Consensus        80 d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~-----~v~W~~~g~~~~~~~  154 (217)
T 2vr9_A           80 DGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP-----TLIWIKDGVPLDDLK  154 (217)
T ss_dssp             CCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC-----EEEEEETTEEECCCC
T ss_pred             cCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC-----eEEEEECCcCCCccc
Confidence            5799999999999965 33555555542 22111  1122244667888887522 1111     2334321100     


Q ss_pred             -c-----EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          71 -W-----QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        71 -~-----~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                       .     ..... .....+.|.++.......|.|.|.|..|....+
T Consensus       155 ~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~  199 (217)
T 2vr9_A          155 AMSFGASSRVRI-VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESS  199 (217)
T ss_dssp             CC---CCCSEEE-ETTTEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred             ccccccCCcEEe-cCCCcEEEeeCCHHHCeEEEEEEEcccceeccc
Confidence             0     00001 123468999999999999999999999876544

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=97.79  E-value=5.3e-06  Score=59.78  Aligned_cols=109  Identities=14%  Similarity=0.123  Sum_probs=59.6

Q ss_pred             CCeeEEEEEEeCCCCceeE--EEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIY--YQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~--~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~   75 (197)
                      +.|.|+|.|.|..|.....  +.+.+..+|....   ..........+.|.|....  ..+  -..+.|...+.......
T Consensus       183 d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g--~P~--p~~v~W~k~~~~~~~~~  258 (308)
T 4fom_A          183 RGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADA--NPP--PFKSVWSRLDGQWPDGL  258 (308)
T ss_dssp             TTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEE--ESC--EEEEECCBSSSCCCSSC
T ss_pred             CCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEec--CCC--CcEEEEEECCeECCCcE
Confidence            5799999999998865443  4444444442111   0011123456777776521  111  12344543222211111


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      .......+.|.++.......|.|.|.|..|....+..+
T Consensus       259 ~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l  296 (308)
T 4fom_A          259 LASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVI  296 (308)
T ss_dssp             BCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEEC
T ss_pred             EEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEE
Confidence            22334455677888888889999999999875443333

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=97.79  E-value=4.4e-05  Score=51.53  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=30.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .+.+++.+|+|++.|.|+|+|.|..|.|+.+..+
T Consensus       156 ~t~~~l~gL~p~t~Y~~~V~A~~~~G~g~~S~~v  189 (195)
T 2qbw_A          156 SSTATISGLKPGVDYTITVYAYSDYYGSHHYSPI  189 (195)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEESSTTSSCBCCCE
T ss_pred             CCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCE
Confidence            4679999999999999999999999999976544

>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A

Probab=97.78  E-value=4.4e-05  Score=52.44  Aligned_cols=104  Identities=7%  Similarity=0.009  Sum_probs=55.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-----EEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-----QSVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-----~~~~   75 (197)
                      +.|.|+|.|.|..|.....+.+.+..++..+...........+.+.+....  +.|..  .|.|...++..     ....
T Consensus        94 D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g--~~P~p--~i~W~k~~~~~~~~~~~~~~  169 (226)
T 4f80_A           94 DSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTG--WYPQP--QIQWSNNKGENIPTVEAPVV  169 (226)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEE--EBSCC--EEEEECTTSCBCCCEECCCE
T ss_pred             HCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEecc--CCCCC--EEEEEECCceEcCCCceEEE
Confidence            479999999999998777777766666555543444455667777776532  11111  35555322111     0011


Q ss_pred             eCCcc--cEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          76 VDAEY--REFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        76 ~~~~~--~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.  ....+..+.+.....|.|.|.|..|...
T Consensus       170 ~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~  204 (226)
T 4f80_A          170 ADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLE  204 (226)
T ss_dssp             ECTTSCEEEEEEEEECC----CEEEEEEETTTTEE
T ss_pred             ECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeE
Confidence            11111  1111223445556678899999887543

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A

Probab=97.78  E-value=0.00011  Score=49.60  Aligned_cols=99  Identities=14%  Similarity=0.132  Sum_probs=60.0

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCC-E--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC------CC
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVP-N--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT------ED   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p-~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~------~~   70 (197)
                      ++|.|+|.|.|..|.. +..+.+.+...|... .  ..........+.|.|....  +.+..  .+.|....      ..
T Consensus        83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~p~~--~v~W~~~~~~l~~~~~  158 (212)
T 2v9r_A           83 DEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPR--GHPEP--TISWKKDGSPLDDKDE  158 (212)
T ss_dssp             SCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCC--EESCC--EEEEEETTEEECTTST
T ss_pred             cCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCC--CCCCC--EEEEEECCccCCCCcc
Confidence            5799999999999865 456666665433211 1  1122345677888887522  11111  24443211      11


Q ss_pred             cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          71 WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        71 ~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...    .....+.|.++.......|.|.+.|..|..
T Consensus       159 ~~~----~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~  191 (212)
T 2v9r_A          159 RIT----IRGGKLMITYTRKSDAGKYVCVGTNMVGER  191 (212)
T ss_dssp             TEE----EETTEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             eEE----ccCCeEEEeeCCHhhCeeEEEEEecccCce
Confidence            111    123478999999988999999999998864

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=97.77  E-value=8e-05  Score=52.98  Aligned_cols=109  Identities=10%  Similarity=-0.019  Sum_probs=65.0

Q ss_pred             CCeeEEEEEEeCCCCce-eEEEEEecCCCCCCE--EE---EEeecCCeEEEEeeeCCCCCccccEEEEEEEeC----CC-
Q psy9139           1 MVGNYTCLADNIFGKDD-IYYQVTILSPPGVPN--IL---LQSTTTHSISILWKPSYDGGAIITHYIVSYRDR----TE-   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~-~~~~~~~~~~P~~p~--~~---~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~----~~-   69 (197)
                      ++|.|+|.|.|..|... ..+.+.+... .+|.  +.   ........+.|.|.....+.   .  .+.|...    .. 
T Consensus       152 d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~---p--~v~W~~~~~~~~~~  225 (289)
T 3mjg_X          152 EDRSYICKTTIGDREVDSDAYYVYRLQV-SSINVSVNAVQTVVRQGENITLMCIVIGNEV---V--NFEWTYPRKESGRL  225 (289)
T ss_dssp             CSSEEEEEEEETTEEEECCCEEEEECCC-CCCCCEEEESCSEEETTSCEEEEEEEESCSS---B--EEEEECTTSSSSCC
T ss_pred             cCcEEEEEEEeCCceeeeeeEEEEecCC-CCCCcEEeCCcceeEcCCCEEEEEEECCCCC---c--ceEEEcCCccCCCc
Confidence            57999999998877543 3445555543 3332  11   11234678888888733221   1  3455411    11 


Q ss_pred             C-cEEEEe----CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          70 D-WQSVHV----DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        70 ~-~~~~~~----~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      . ......    ......+.|.++.......|.|.|.|..|....+..+.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v  276 (289)
T 3mjg_X          226 VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINI  276 (289)
T ss_dssp             CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEE
Confidence            1 111111    113457899999999999999999999987765554444

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=97.77  E-value=7.8e-05  Score=57.80  Aligned_cols=104  Identities=13%  Similarity=0.137  Sum_probs=67.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-E----EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC----c
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-I----LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED----W   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~----~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~----~   71 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|.... .    .........+.|.|.....+. + .  .+.|...+..    .
T Consensus       284 D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~-p-~--~v~W~k~g~~~~~~~  359 (524)
T 2ec8_A          284 DSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPK-P-E--HQQWIYMNRTFTDKW  359 (524)
T ss_dssp             TCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESC-C-C--EEEEESSSCBCSSSB
T ss_pred             HCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCC-C-c--EEEEEECCeeccCCc
Confidence            57999999999999988888888887764332 1    133345667888887622111 1 1  3555522111    0


Q ss_pred             -EEEEeCC-----cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          72 -QSVHVDA-----EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        72 -~~~~~~~-----~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                       .......     ....+.|.++.......|.|.|.|..|...
T Consensus       360 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~  402 (524)
T 2ec8_A          360 EDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAA  402 (524)
T ss_dssp             CCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred             cceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEE
Confidence             1111111     235789999999999999999999988643

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=97.76  E-value=0.00038  Score=52.74  Aligned_cols=152  Identities=13%  Similarity=0.014  Sum_probs=73.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC-E-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEE--Ee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP-N-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSV--HV   76 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p-~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~--~~   76 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|... . .... .....+.|.|...-.+..     .|.|..........  ..
T Consensus       114 D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~-~~~~~~~L~C~a~G~P~P-----~i~W~k~~~~~~~~~~~~  187 (423)
T 3qs7_E          114 QAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFR-KMENQDALVCISESVPEP-----IVEWVLCDSQGESCKEES  187 (423)
T ss_dssp             SCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEE-ECSSSSCEEEEEEESSCC-----EEEEEEC-----------
T ss_pred             cCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEe-ccCCceEEEEEEeeecCC-----eEEEEECCCCCccccccc
Confidence            5799999999999988888888888665432 1 2222 224455667765322222     23343211110000  00


Q ss_pred             CC--cccEEEECCCCCCCEEEEEEEEEcCCcCCCCC-CceEeec--------------------------CCCCCCCeee
Q psy9139          77 DA--EYREFTLTQLKCGTHYKINIKLVNSIGESKPS-KTIAAST--------------------------KGEDQTDWIN  127 (197)
Q Consensus        77 ~~--~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s-~~~~~~t--------------------------~~~~~~~w~~  127 (197)
                      ..  ......   |.......|.|.|.|..|..... ..+.+..                          .+.+...|..
T Consensus       188 ~~~~~~~~~~---l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k  264 (423)
T 3qs7_E          188 PAVVKKEEKV---LHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL  264 (423)
T ss_dssp             --CEEECCSE---ECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEE
T ss_pred             cccccccceE---EecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEE
Confidence            00  000011   12333446778888877753210 0011100                          0112567876


Q ss_pred             cCCCCCcc--------------cccceEEEcCCCCCCeEEEEEEEEcC
Q psy9139         128 IPLSNLDE--------------ALEMPLVIENLLPATRYELTISAKND  161 (197)
Q Consensus       128 ~~~~~~~~--------------~~~~~~~i~~L~p~t~Y~v~V~a~n~  161 (197)
                      ........              .....+.|.++.....-.+.+.|.|.
T Consensus       265 ~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~  312 (423)
T 3qs7_E          265 ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH  312 (423)
T ss_dssp             SSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred             CCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence            55432210              00125889999998888999999887

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=97.76  E-value=4.2e-05  Score=55.65  Aligned_cols=111  Identities=21%  Similarity=0.221  Sum_probs=66.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC-CCCEE------EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC---CC-
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP-GVPNI------LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR---TE-   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P-~~p~~------~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~---~~-   69 (197)
                      ++|.|+|.|.|..|.....+.+.+...+ .+|.+      .........+.|.|.....+..     .+.|...   ++ 
T Consensus       191 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p-----~v~W~~~~~~~g~  265 (334)
T 1ry7_B          191 DRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-----HIQWLKHVEVNGS  265 (334)
T ss_dssp             GCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCE-----EEEEEECCCGGGC
T ss_pred             cCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCC-----eEEEEECCcCCCc
Confidence            4799999999999988888888877532 22221      1122345668888876322211     3444321   11 


Q ss_pred             ------Cc-EEEEe-------CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          70 ------DW-QSVHV-------DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        70 ------~~-~~~~~-------~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                            .. ..+..       ......+.|.++.......|.|.|.|..|....+..+.+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~  326 (334)
T 1ry7_B          266 KVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL  326 (334)
T ss_dssp             SBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEE
T ss_pred             cccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEE
Confidence                  00 00000       0112368999999988999999999999876544444443

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=97.76  E-value=0.00013  Score=53.13  Aligned_cols=105  Identities=10%  Similarity=-0.017  Sum_probs=66.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC--E--EEEEeecCCeEEEEeee-----CCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP--N--ILLQSTTTHSISILWKP-----SYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p--~--~~~~~~~~~~~~l~W~~-----~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|...  .  ..........+.|.|..     ...+...+.+|+-.........
T Consensus        92 D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~  171 (339)
T 3o4o_C           92 DSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE  171 (339)
T ss_dssp             CCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCS
T ss_pred             cCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCc
Confidence            5799999999999988888888888776542  1  22233567889999984     2122223444331110011101


Q ss_pred             EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          72 QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        72 ~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      . .........+.|.++.......|.|.+.|..|.
T Consensus       172 ~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~  205 (339)
T 3o4o_C          172 K-FLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG  205 (339)
T ss_dssp             S-EEECTTSSEEEESSCCGGGCEEEEEEEECCBTT
T ss_pred             e-eEEcCCcceEEEcccCHhhCeEEEEEEEECCCC
Confidence            1 112223357999999999999999999987764

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A

Probab=97.75  E-value=2.7e-05  Score=51.84  Aligned_cols=100  Identities=11%  Similarity=0.033  Sum_probs=59.9

Q ss_pred             CCeeEEEEEEeCCC-CceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-----E
Q psy9139           1 MVGNYTCLADNIFG-KDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-----Q   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-----~   72 (197)
                      ++|.|+|.|.|..| .....+.+.+..+|....  ..........+.|.|.....+..     .+.|.......     .
T Consensus        73 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~v~W~~~~~~~~~~~~~  147 (191)
T 1epf_A           73 DAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPP-----TIIWKHKGRDVILKKDV  147 (191)
T ss_dssp             GCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCC-----EEEEEETTEEGGGGCCT
T ss_pred             cCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCC-----EEEEEECCEEeeccCCc
Confidence            57999999999984 556677777776553211  01122346678888876422221     24444211100     0


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ..... ....+.|.++.......|.|.|.|..|.
T Consensus       148 ~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~~~  180 (191)
T 1epf_A          148 RFIVL-SNNYLQIRGIKKTDEGTYRCEGRILARG  180 (191)
T ss_dssp             TEEEC-TTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred             eEEEe-cCCeEEECCCChhhCEEEEEEEEEecce
Confidence            01111 2236899999999999999999997754

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=97.74  E-value=0.00055  Score=46.73  Aligned_cols=69  Identities=19%  Similarity=0.316  Sum_probs=48.2

Q ss_pred             CCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEECCC--CCCCEEEEEEEEEcCCcCCCC
Q psy9139          40 THSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTLTQL--KCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        40 ~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i~~L--~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .-...|.|+++..... -..|.++|+. ....|..+.  .....+.+.++++  .....|..||+|....+.+.+
T Consensus        17 Nf~~iL~W~p~~~~~~-~~~YtVqy~~~~~~~W~~v~~C~~it~t~CDlT~~~~d~~~~Y~~RVrA~~g~~~S~w   90 (211)
T 3dlq_R           17 NFENILTWDSGPEGTP-DTVYSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSAT   90 (211)
T ss_dssp             TTEEEEEEEECTTCCS-SEEEEEEEEETTCCCCEECTTCSSBSSSEEECTGGGCCTTCCEEEEEEEEETTSCEEE
T ss_pred             CCeeEEEECCCCCCCC-CeEEEEEEEECCCCCceeccccCCCCCCEEeCCcccccCCccEEEEEEEEeCCCcCCc
Confidence            4456899999764333 4669999984 455788643  3445667888774  567889999999987655543

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=97.74  E-value=1e-05  Score=59.56  Aligned_cols=107  Identities=16%  Similarity=0.168  Sum_probs=62.8

Q ss_pred             CCe-eEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC--
Q psy9139           1 MVG-NYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD--   77 (197)
Q Consensus         1 ~~g-~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--   77 (197)
                      +.| .|+|.|.|..|.....+.+.+..+|.. . .........+.|.|.....+...+.||+-...............  
T Consensus       223 D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i-~-~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~  300 (347)
T 2ifg_A          223 LNRKNVTCWAENDVGRAEVSVQVNVSFPASV-Q-LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEP  300 (347)
T ss_dssp             TTTCCEEECCEETTEECCEEECCCCBEEEEE-E-ECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCC
T ss_pred             HCCCeEEEEEEcCCCCEEEEEEEEEcCCCee-e-eccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEee
Confidence            478 999999999998877777777665543 1 11122345677777663222222222210000111212221111  


Q ss_pred             -----CcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          78 -----AEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        78 -----~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                           .....+.|.++.......|.|.|.|..|....
T Consensus       301 ~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~  337 (347)
T 2ifg_A          301 AANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA  337 (347)
T ss_dssp             CTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             cCCCcccceEEEECCCCcccCceEEEEEecCCCceee
Confidence                 12445899999999999999999999886543

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}

Probab=97.70  E-value=0.0001  Score=48.80  Aligned_cols=102  Identities=13%  Similarity=0.120  Sum_probs=61.6

Q ss_pred             CCeeEEEEEEeCCCCce--eEEEEEecCCCCCC---E-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-----CC
Q psy9139           1 MVGNYTCLADNIFGKDD--IYYQVTILSPPGVP---N-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----TE   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~--~~~~~~~~~~P~~p---~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-----~~   69 (197)
                      +.|.|+|.+.|..+...  ..+.+.+..+|...   . ..........+.|.|.....+..     .+.|...     ..
T Consensus        68 d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-----~v~W~~~g~~~~~~  142 (189)
T 2v5t_A           68 DEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP-----AISWFRNGKLIEEN  142 (189)
T ss_dssp             GCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCC-----EEEEEETTEECCCS
T ss_pred             HCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCC-----eEEEEECCEECcCC
Confidence            57999999999986433  34455555544221   1 22333456778888876322111     2344321     11


Q ss_pred             CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          70 DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        70 ~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...  ........+.|.++.......|.|.+.|..|....
T Consensus       143 ~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~  180 (189)
T 2v5t_A          143 EKY--ILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEK  180 (189)
T ss_dssp             SSE--EEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             CcE--EEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeE
Confidence            111  12334567999999999999999999999886543

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*

Probab=97.70  E-value=0.00035  Score=49.05  Aligned_cols=106  Identities=13%  Similarity=0.098  Sum_probs=57.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeC---CCCCccccEEE-----------EEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPS---YDGGAIITHYI-----------VSYR   65 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~---~~~~~~i~~y~-----------v~~~   65 (197)
                      ++|.|+|.|.|..+.......+.+...|..|. ..+  .....+.|.|...   ..+...+.||+           +.+.
T Consensus        95 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v--~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~  172 (268)
T 3mj6_A           95 DEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRV--RVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYD  172 (268)
T ss_dssp             GCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEE--ETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEE
T ss_pred             HCEEEEEEEEecCCcceEEEEEEEEEeccCCCcccc--ccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEec
Confidence            47999999999877654444343333355553 222  3456677777651   11111122222           1110


Q ss_pred             e--------CCCCcE-EEEe----CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          66 D--------RTEDWQ-SVHV----DAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        66 ~--------~~~~~~-~~~~----~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .        ..+.+. .+.+    ......+.|.++.......|.|.+.|..|...
T Consensus       173 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~  228 (268)
T 3mj6_A          173 SNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESR  228 (268)
T ss_dssp             TTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEE
Confidence            0        000000 0001    12345789999999999999999999776543

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=7.2e-06  Score=49.59  Aligned_cols=32  Identities=25%  Similarity=0.353  Sum_probs=29.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|.++.
T Consensus        60 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~g~~s~   91 (105)
T 2ekj_A           60 RSHVTLPDLQAATKYRVLVSAIYAAGRSEAVS   91 (105)
T ss_dssp             SSEEEECSCCSSCCCBCBBCBBCSSCBCCCBC
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEeCCccCCccc
Confidence            56899999999999999999999999998654

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=97.66  E-value=1.1e-05  Score=50.26  Aligned_cols=30  Identities=20%  Similarity=0.226  Sum_probs=27.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.
T Consensus        81 ~t~~~l~gL~P~t~Y~~~V~A~~~~G~g~~  110 (121)
T 2ocf_D           81 KSTATISGLKPGVDYTITVYAVTGLRLMLA  110 (121)
T ss_dssp             CCEEEECCCCTTCEEEEEEEEECCHHHHHH
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEeCCCccCC
Confidence            457999999999999999999999998764

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=97.65  E-value=6.2e-05  Score=53.54  Aligned_cols=103  Identities=15%  Similarity=0.159  Sum_probs=62.1

Q ss_pred             CCeeEEEEEEeCCCCc--eeEEEEEecCCCCCCE----EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC----CC
Q psy9139           1 MVGNYTCLADNIFGKD--DIYYQVTILSPPGVPN----ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT----ED   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~--~~~~~~~~~~~P~~p~----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~----~~   70 (197)
                      +.|.|+|.|.|..+..  ...+.+.+..+|....    ..........+.|.|.....+..     .+.|....    ..
T Consensus       166 d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-----~i~W~~~g~~~~~~  240 (291)
T 1qz1_A          166 DEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEP-----TMSWTKDGEPIENE  240 (291)
T ss_dssp             GCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCC-----EEEEEETTEECCCC
T ss_pred             cCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCC-----cEEEEECCEECcCC
Confidence            4799999999987532  3455666665553221    12233456778888876322111     24443211    00


Q ss_pred             c---EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          71 W---QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        71 ~---~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .   ...........+.|.++.......|.|.|.|..|...
T Consensus       241 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  281 (291)
T 1qz1_A          241 EEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQD  281 (291)
T ss_dssp             --CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceE
Confidence            0   0122334456799999999999999999999998654

>3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor); helical bundle, fibronectin type III domain, beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A {Homo sapiens} PDB: 3og4_B*

Probab=97.65  E-value=0.0019  Score=44.45  Aligned_cols=81  Identities=17%  Similarity=0.294  Sum_probs=53.9

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEE--eCCCCcEEEE--eCCcccEEEECCC---CCCCEEEEEEEE
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVH--VDAEYREFTLTQL---KCGTHYKINIKL  100 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~--~~~~~~~~~~--~~~~~~~~~i~~L---~p~~~y~~~v~a  100 (197)
                      |.|.++.+. ...-...|.|+++...... ..|.++|+  .....|..+.  .....+.+.++.+   +....|..||+|
T Consensus         7 p~P~NV~~~-S~Nf~~iL~W~p~~~~~~~-v~YtVqy~~~y~~~~W~~v~~C~~it~t~CDlT~~~~~d~~~~Y~~RVrA   84 (226)
T 3og6_B            7 APPQNVTLL-SQNFSVYLTWLPGLGNPQD-VTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRT   84 (226)
T ss_dssp             CCCEEEEEE-EETTEEEEEEECCSSCCSS-CEEEEEEECCTTSCCEEECGGGTTBCSSEEECSSCTTCCTTSCBCEEEEE
T ss_pred             CCCceeEEE-EECCceEEEECCCCCCCCC-eEEEEEEEecCCCCCceeCccccCCCCCEEeCCcccccCCccCEEEEEEE
Confidence            333335544 3355678999997533333 45999998  3556887643  2455678898874   667889999999


Q ss_pred             EcCCcCCCCC
Q psy9139         101 VNSIGESKPS  110 (197)
Q Consensus       101 ~~~~g~~~~s  110 (197)
                      ......+.+.
T Consensus        85 ~~g~~~S~W~   94 (226)
T 3og6_B           85 VSPSSKSPWV   94 (226)
T ss_dssp             EETTEECCCE
T ss_pred             EcCCCccCCe
Confidence            9876555543

>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*

Probab=97.64  E-value=0.00056  Score=46.17  Aligned_cols=64  Identities=17%  Similarity=0.192  Sum_probs=45.1

Q ss_pred             CCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE--eCCcccEEEECCC--CCCCEEEEEEEEEcCC
Q psy9139          40 THSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH--VDAEYREFTLTQL--KCGTHYKINIKLVNSI  104 (197)
Q Consensus        40 ~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~--~~~~~~~~~i~~L--~p~~~y~~~v~a~~~~  104 (197)
                      .-.-.|.|+++.....+ ..|.++|..  ....|..+.  .....+.+.+++.  .....|..||+|..+.
T Consensus        14 Nf~~iL~W~p~~~~~~~-v~YtVqy~~~~~~~~W~~v~~C~nit~t~CDLt~~~~~~~~~Y~~RV~A~~g~   83 (199)
T 3s9d_B           14 NFRSILSWELKNHSIVP-THYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGN   83 (199)
T ss_dssp             TTEEEEEEECSSCCSSC-CEEEEEEEESSSCCCCEECGGGSSBSCSEEECTTTCCCSSSCEEEEEEEEC--
T ss_pred             CCceEEEECCCCCCCCC-cEEEEEEEEecCCCcceECCcCCccCCCEEcCCCccccCcccEEEEEEEECCC
Confidence            44567999997644334 469999983  367887643  2455678888776  6788899999998654

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.64  E-value=7.5e-05  Score=45.68  Aligned_cols=31  Identities=19%  Similarity=0.253  Sum_probs=26.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      .+.++|.+|+|++.|.|+|+|.+..|.+.+.
T Consensus        69 ~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~   99 (112)
T 2cui_A           69 RHSAVLRDLRSGTLYSLTLYGLRGPHKADSI   99 (112)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECSSSEEEEE
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEECCcccCCE
Confidence            5579999999999999999999887766543

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=97.63  E-value=0.00011  Score=43.43  Aligned_cols=30  Identities=20%  Similarity=0.433  Sum_probs=26.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...++|.+|+|++.|.|.|.|.+..+.+.+
T Consensus        58 ~~s~~l~~L~PgT~Y~V~v~a~~~~~~S~p   87 (95)
T 2h41_A           58 ATSVNIPDLLPGRKYIVNVYQISEDGEQSL   87 (95)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCCcccC
Confidence            568999999999999999999998777764

>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.63  E-value=0.00013  Score=41.97  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=31.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      ..+|+|+||+|+..|+..|.+.|..|.++.+ .|...
T Consensus        60 ~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs-~f~Ft   95 (98)
T 1oww_A           60 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDFT   95 (98)
T ss_dssp             CCEEEECSCCSSEEEEEEEEEEESSSCEEEE-EEEEE
T ss_pred             cceEEEecCCCCcEEEEEEEEeeccCcccce-EEEEE
Confidence            4579999999999999999999999999965 44443

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=97.60  E-value=0.0018  Score=43.67  Aligned_cols=25  Identities=8%  Similarity=0.256  Sum_probs=22.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDA  162 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~  162 (197)
                      ...+.|.+|.|++.|.|+|+|....
T Consensus       150 ~~~~~l~~l~p~~~Y~vqVR~~~~~  174 (199)
T 2b5i_C          150 RHKFSLPSVDGQKRYTFRVRSRFNP  174 (199)
T ss_dssp             SCEEEECSCCTTSCEEEEEEEECCS
T ss_pred             ceEEEecCCCCCcEEEEEEEEeccC
Confidence            4578999999999999999999854

>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A

Probab=97.60  E-value=0.0046  Score=41.44  Aligned_cols=107  Identities=12%  Similarity=0.098  Sum_probs=62.2

Q ss_pred             CCeeEEEEEEeCCC-----CceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFG-----KDDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|+|.|.|..+     ..+..+.+.+...+.+|.+....    .....+.|.|....  . + ..  +.|...+...
T Consensus        74 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~--~-~-~~--~~w~k~g~~~  147 (201)
T 1nkr_A           74 LAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRS--S-Y-DM--YHLSREGEAH  147 (201)
T ss_dssp             GCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESS--C-C-SE--EEEEETTCSS
T ss_pred             cCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCC--C-C-ce--EEEEECCccc
Confidence            57999999987532     23456678887776667644322    34678999998743  1 1 22  3343222211


Q ss_pred             EE-E---E-eCC-cccEEEECCCCCCCEEEEEEEEEcCC---cCCCCCCceEe
Q psy9139          72 QS-V---H-VDA-EYREFTLTQLKCGTHYKINIKLVNSI---GESKPSKTIAA  115 (197)
Q Consensus        72 ~~-~---~-~~~-~~~~~~i~~L~p~~~y~~~v~a~~~~---g~~~~s~~~~~  115 (197)
                      .. .   . ... ....+.|.++.  ....|.|.|.+..   ..+.+|..+.+
T Consensus       148 ~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l  198 (201)
T 1nkr_A          148 ERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLV  198 (201)
T ss_dssp             CEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEE
T ss_pred             CcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEE
Confidence            11 0   1 111 24567888887  6778888888653   34556665543

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=97.60  E-value=5.2e-05  Score=54.74  Aligned_cols=107  Identities=9%  Similarity=0.107  Sum_probs=61.1

Q ss_pred             CCeeEEEEEEeCCCCceeE--EEEEecCCCCCCEEEEE------eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE
Q psy9139           1 MVGNYTCLADNIFGKDDIY--YQVTILSPPGVPNILLQ------STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~--~~~~~~~~P~~p~~~~~------~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~   72 (197)
                      +.|.|+|.|.|..|.....  +.+.+..+|   .+.+.      ......+.|.|.....+ .+   ..+.|...+....
T Consensus       188 d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P---~v~~~~~~~~~~~~g~~v~l~C~~~g~P-~p---~~v~W~~~~~~l~  260 (313)
T 4fqp_A          188 DGKNVTCKVEHESFEKPQLLTVNLTVYYPP---EVSISGYDNNWYLGQNEATLTCDARSNP-EP---TGYNWSTTMGPLP  260 (313)
T ss_dssp             TTCEEEEEEECTTSSSCEEEEEECCBCEEE---EEEEECCCSCEETTCCCEEEEEEEEEES-CC---CEEEEEETTBSCC
T ss_pred             cCeeEEEEEEccCcCccceeeeecccccCC---ccccccccceeecCCCeEEEEEEecCCC-CC---cEEEEEECCEECC
Confidence            4689999999998865443  344444333   21111      12345678888752211 12   1244543222110


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      .. .......+.|.++.......|.|.|.|..|....+..+.+
T Consensus       261 ~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V  302 (313)
T 4fqp_A          261 PF-AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQV  302 (313)
T ss_dssp             TT-EEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEE
T ss_pred             Cc-eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEE
Confidence            00 0112357899999999999999999999986544333333

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4

Probab=97.59  E-value=0.00029  Score=46.39  Aligned_cols=99  Identities=10%  Similarity=-0.006  Sum_probs=58.9

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      ++|.|+|.|.|..|. .+..+.+.+..+|....  ..........+.|.|.....+. ++   .+.|.........  ..
T Consensus        71 d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~---~v~W~~~~~~~~~--~~  144 (182)
T 1rhf_A           71 DAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPE-PV---TIVWWRGTTKIGG--PA  144 (182)
T ss_dssp             GCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSS-CC---EEEEEETTEECSC--SE
T ss_pred             cCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCC-CC---EEEEEcCCeECCC--CC
Confidence            579999999999885 44677888887663221  1122234567888888643221 11   3455432211000  00


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .....+.|.+++.  ...|.|.|.|..|..
T Consensus       145 ~~~~~L~i~~~~d--~G~Y~C~a~N~~g~~  172 (182)
T 1rhf_A          145 PSPSVLNVTGVTQ--STMFSCEAHNLKGLA  172 (182)
T ss_dssp             ESSEEEEECCCSS--CEEEEEEEEETTEEE
T ss_pred             CCceEEEEecccc--CeEEEEEEECCCCCc
Confidence            1455688888853  468889999998865

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=97.57  E-value=0.00045  Score=48.54  Aligned_cols=87  Identities=15%  Similarity=0.127  Sum_probs=51.1

Q ss_pred             eeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEE---eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQ---STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~---~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      |.|+|.|.|..|..+..+.+.+...|. |.+...   ......+.|.|...  +..     .+.| +....    .....
T Consensus        74 g~Y~C~a~n~~~~~~~~~~l~V~~~p~-p~~~~~~~~v~~G~~v~l~C~~~--p~~-----~i~W-~g~~~----~~~~~  140 (265)
T 2oz4_A           74 QRLTCAVILGNQSQETLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEAH--PRA-----KVTL-NGVPA----QPLGP  140 (265)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEEECCCC-CEEEESCSEEETTCEEEEEEECC--TTS-----EEEE-SSCSS----SCCSS
T ss_pred             ceEEEEEecCCCCcEEEEEEEEeCCCC-ceeecCCceecCCCcEEEEEEcc--CCC-----EEEE-CCEEc----cCCCC
Confidence            369999999999888888888887665 432221   13367788888765  222     2445 22111    11222


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEc
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ...+.+..........|.|.+.|
T Consensus       141 ~~~l~i~~~~~~~~g~Y~C~a~n  163 (265)
T 2oz4_A          141 RAQLLLKATPEDNGRSFSCSATL  163 (265)
T ss_dssp             EECCEEECCGGGTTEEEEEEEEE
T ss_pred             cEEEEEccccccCCceEEEEEEc
Confidence            33355555555555566677764

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*

Probab=97.57  E-value=0.00054  Score=46.60  Aligned_cols=69  Identities=10%  Similarity=0.021  Sum_probs=41.4

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEe-CC--cccEEEE--CCCCCCCEEEEEEEEEc
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHV-DA--EYREFTL--TQLKCGTHYKINIKLVN  102 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~-~~--~~~~~~i--~~L~p~~~y~~~v~a~~  102 (197)
                      +.+.......+...|.++.+++.+ ..|.+.|+..  ...+..+.. ..  ....+.+  ..+.....|.+.|.+.+
T Consensus         7 l~C~~~~~~~~~C~W~~~~~~~~~-~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~~i~v~~~~   82 (207)
T 1iar_B            7 PTCVSDYMSISTCEWKMNGPTNCS-TELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQ   82 (207)
T ss_dssp             EEEEECSSSEEEEEEEESSCCCHH-HHEEEEEEESSSSCCCEEECCEESSSSEEEEEEECSCCCTTCCEEEEEEETT
T ss_pred             CcEEECCCceEEEEecCCCCCCCC-cCEEEEEEeccCCCCCccCcCccCcccceEEEEeCcccccceEEEEEEEeCC
Confidence            666666778899999998765444 4678888743  234443331 11  1223444  44556677888886643

>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A

Probab=97.55  E-value=6e-05  Score=50.33  Aligned_cols=97  Identities=9%  Similarity=0.094  Sum_probs=57.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC---------------E-----------EEE-EeecCCeEEEEeeeCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP---------------N-----------ILL-QSTTTHSISILWKPSYDG   53 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p---------------~-----------~~~-~~~~~~~~~l~W~~~~~~   53 (197)
                      ++|.|+|.|.|..|.......+.+...+.+.               .           ..+ .......+.|.|..|   
T Consensus        56 D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p---  132 (186)
T 1jbj_A           56 DSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLT---  132 (186)
T ss_dssp             SCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSS---
T ss_pred             cCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCC---
Confidence            5899999999999985555544433221111               0           000 112567788888762   


Q ss_pred             CccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          54 GAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        54 ~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...     +.|........  ........+.|.++.+.....|.|.|.|..|..
T Consensus       133 ~p~-----i~W~k~g~~i~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~  179 (186)
T 1jbj_A          133 DKT-----IKWLKDGSIIS--PLNATKNTWNLGNNAKDPRGTYQCQGAKETSNP  179 (186)
T ss_dssp             CSC-----EEEEETTEECC--CSSCCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred             CCe-----EEEEECCEECc--ccCCCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence            222     34432211000  012245568888999999999999999988754

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=97.55  E-value=0.0002  Score=48.45  Aligned_cols=95  Identities=14%  Similarity=0.064  Sum_probs=56.6

Q ss_pred             ccEEEECCCCCCCEEEEEEEEE-----c-CCcCCCCCCceEeec----CCCCCCCeeecCCCCCc---------------
Q psy9139          80 YREFTLTQLKCGTHYKINIKLV-----N-SIGESKPSKTIAAST----KGEDQTDWINIPLSNLD---------------  134 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~-----~-~~g~~~~s~~~~~~t----~~~~~~~w~~~~~~~~~---------------  134 (197)
                      -+.+.|.+++ |+.|.+.....     + ..+.-.+.++..++.    .......|.........               
T Consensus       117 vts~~vgdg~-g~~~~~~~~~k~v~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~GI~gY~ly~~g~~v~~v  195 (238)
T 2w1n_A          117 VTNSSVGDGE-GLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGKKVAEI  195 (238)
T ss_dssp             EEEEEEECTT-SCEEECBCEEEEEEEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTTEEEEEEEETTEEEEEE
T ss_pred             eeeEEEecCC-CcEEEeeccceeeeeccCCCCcCccCCCCceEEEEccCCeEEEEecCCCCCCCceeEEEEeCCceeEEe
Confidence            4567888888 88898876432     1 112222332222211    11114555544432100               


Q ss_pred             ccccceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         135 EALEMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       135 ~~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ..+...|++.+|+++|.|.|+|.|.|..|.+.....+...|
T Consensus       196 ~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrT  236 (238)
T 2w1n_A          196 GKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT  236 (238)
T ss_dssp             ETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEEC
T ss_pred             eccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEe
Confidence            02346899999999999999999999999887655554443

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X

Probab=97.54  E-value=5.8e-05  Score=47.12  Aligned_cols=31  Identities=32%  Similarity=0.365  Sum_probs=27.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP   31 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p   31 (197)
                      ++|+|+|+|.|.+|.....+.+.+...|.+.
T Consensus        74 D~G~YtC~A~N~~G~~~~t~~l~v~~~P~~~  104 (126)
T 1he7_A           74 NNGNYTLLAANPFGQASASIMAAFMDNPFEF  104 (126)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEECCCSCTTSC
T ss_pred             CCEEEEEEEEECCCeEEEEEEEEEEcCCCCC
Confidence            4799999999999999999999998888654

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=97.53  E-value=0.0022  Score=45.39  Aligned_cols=37  Identities=8%  Similarity=-0.036  Sum_probs=30.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      ...+.|.++.....-.+.+.|.|..|....+..+...
T Consensus       241 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~  277 (289)
T 3mjg_X          241 RSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT  277 (289)
T ss_dssp             EEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred             EEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEE
Confidence            3578999999988889999999999988876655444

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=97.50  E-value=4.9e-05  Score=46.67  Aligned_cols=26  Identities=27%  Similarity=0.363  Sum_probs=24.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAG  163 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G  163 (197)
                      ...++|.+|+|++.|.|+|+|.|..|
T Consensus        56 ~ts~~l~gL~P~T~Y~v~V~A~~~~G   81 (114)
T 3qwq_B           56 VHTATISGLKPGVDYTITVYAVTDHK   81 (114)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEEEEE
T ss_pred             cCEEEeCCCCCCCEEEEEEEEEECCc
Confidence            45799999999999999999999998

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}

Probab=97.50  E-value=0.00053  Score=46.74  Aligned_cols=97  Identities=10%  Similarity=0.089  Sum_probs=61.0

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCC------------CCCEEE-----EEeecCCeEEEEeeeCCCCCccccEEEE
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPP------------GVPNIL-----LQSTTTHSISILWKPSYDGGAIITHYIV   62 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P------------~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~v   62 (197)
                      ++|.|+|.|.|..|.. +..+.+.+...|            .+|.+.     ........+.|.|.....+  + .  .+
T Consensus        76 d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p--~-~--~v  150 (218)
T 3k0w_A           76 DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSP--I-P--HY  150 (218)
T ss_dssp             GCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSS--C-C--EE
T ss_pred             hCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccC--C-C--eE
Confidence            4799999999998854 455667666543            223322     1223456788888773221  1 1  24


Q ss_pred             EEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          63 SYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .|......    ........+.|.++.......|.|.|.|..|.
T Consensus       151 ~W~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~  190 (218)
T 3k0w_A          151 QWFKNELP----LTHETKKLYMVPYVDLEHQGTYWCHVYNDRDS  190 (218)
T ss_dssp             EEEETTEE----CTTCCSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred             EEEECCEE----CCCCCCCEEEEeecChhcCEEEEEEEEcCCCC
Confidence            55432110    11233457899999999999999999998775

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=97.50  E-value=0.0011  Score=47.01  Aligned_cols=106  Identities=14%  Similarity=0.152  Sum_probs=63.8

Q ss_pred             CCeeEEEEEE-eCCCCceeEEEEEecCC-CCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC----
Q psy9139           1 MVGNYTCLAD-NIFGKDDIYYQVTILSP-PGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTE----   69 (197)
Q Consensus         1 ~~g~y~c~a~-n~~G~~~~~~~~~~~~~-P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----   69 (197)
                      +.|.|+|.|. |..|..+..+.+.+... +.+|.+....     .....+.|.|....  ..+.  ..+.|.....    
T Consensus       155 d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~--~~p~--~~i~W~~~~~~~~~  230 (289)
T 3ejj_X          155 DSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATN--AEVG--FNVILKRGDTKLEI  230 (289)
T ss_dssp             GCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEE--SSSC--CEEEEEETTEECCC
T ss_pred             cCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCC--CCCc--eEEEEEECCEEeec
Confidence            4799999999 55555667777777743 3556533221     24667888887632  1111  1344542211    


Q ss_pred             CcEEEEeC---CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          70 DWQSVHVD---AEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        70 ~~~~~~~~---~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ........   .....+.|.++.......|.|.|.|..|....+
T Consensus       231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s  274 (289)
T 3ejj_X          231 PLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTAT  274 (289)
T ss_dssp             CEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEE
T ss_pred             cCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcccc
Confidence            11110001   124568999999999999999999999875543

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=97.49  E-value=0.00099  Score=48.65  Aligned_cols=102  Identities=11%  Similarity=0.024  Sum_probs=61.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE------EEEEeecCCeEEEEeeeCCC--CCccccEEEEEEEeCCCCcE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN------ILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRTEDWQ   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~------~~~~~~~~~~~~l~W~~~~~--~~~~i~~y~v~~~~~~~~~~   72 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|....      ..........+.|.|.....  .+.+.  ..+.|........
T Consensus        90 D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~--~~v~W~k~~~~l~  167 (349)
T 4dep_C           90 DTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK--PTITWYMGCYKIQ  167 (349)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSC--CEEEEEETTEECC
T ss_pred             hCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCC--ceEEEeeCCEECC
Confidence            57999999999999888888888877654321      12333556779999974211  11121  1344432110000


Q ss_pred             -EEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          73 -SVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        73 -~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                       ..........+.|.++.......|.|.+.|..
T Consensus       168 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~  200 (349)
T 4dep_C          168 NFNNVIPEGMNLSFLIALISNNGNYTCVVTYPE  200 (349)
T ss_dssp             SCSSEEEETTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred             CccceeecCCEEEEeeeeecCCcEEEEEEEEee
Confidence             00011123568888888888888888888865

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*

Probab=97.48  E-value=0.00031  Score=47.56  Aligned_cols=96  Identities=8%  Similarity=-0.041  Sum_probs=56.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      ++|.|+|.|.|.  ..+..+.+.+..+|.... ..........+.|.|.....  .+.  -.+.|...+..   +.....
T Consensus        65 D~G~Y~C~a~n~--~~s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~--~p~--~~v~W~k~g~~---~~~~~~  135 (204)
T 3sgj_C           65 DSGEYRCQTQLS--TLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKN--TAL--HKVTYLQNGKG---RKYFHH  135 (204)
T ss_dssp             GCEEEEEEETTS--BCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGG--CCC--EEEEEEETTEE---EEEEEE
T ss_pred             CCEEEEEEeCCC--cccccEEEEEecCceEecCCceeEeCCCcEEEEEEecCC--CCC--ceEEEEECCcE---eecccC
Confidence            479999999984  344456666665542111 00112346778888876331  121  23455432221   111223


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ...+.|.++.......|.|.|.|..+
T Consensus       136 ~~~L~i~~v~~~D~G~Y~C~a~n~~~  161 (204)
T 3sgj_C          136 NSDFYIPKATLKDSGSYFCRGLVGSK  161 (204)
T ss_dssp             CCCEEESSCCGGGCEEEEEEEEETTE
T ss_pred             CceEEECcCCcccCEEEEEEEEeCCC
Confidence            45689999999999999999999543

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=97.47  E-value=0.00096  Score=48.47  Aligned_cols=105  Identities=10%  Similarity=0.016  Sum_probs=62.2

Q ss_pred             CCeeEEEEEEeC--CCCceeE----EEEEecCCCCCCE--E---EEEeecCCeEEEEeeeCCCC--CccccEEEEEEEeC
Q psy9139           1 MVGNYTCLADNI--FGKDDIY----YQVTILSPPGVPN--I---LLQSTTTHSISILWKPSYDG--GAIITHYIVSYRDR   67 (197)
Q Consensus         1 ~~g~y~c~a~n~--~G~~~~~----~~~~~~~~P~~p~--~---~~~~~~~~~~~l~W~~~~~~--~~~i~~y~v~~~~~   67 (197)
                      ++|.|+|.|.|.  .|.....    +.+.+..+|....  +   .........+.|.|.....+  ..++   .+.|...
T Consensus       193 D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i---~v~W~~~  269 (329)
T 3oq3_B          193 DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDV---LIDWENP  269 (329)
T ss_dssp             GCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCC---EEEEECT
T ss_pred             hCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCc---EEEEEEC
Confidence            479999999997  7654433    6677777664321  1   12223456788888764322  1221   4566532


Q ss_pred             CCC------cEEEE--eC--CcccEEEECCCCCCCEE-EEEEEEEcCCcCCC
Q psy9139          68 TED------WQSVH--VD--AEYREFTLTQLKCGTHY-KINIKLVNSIGESK  108 (197)
Q Consensus        68 ~~~------~~~~~--~~--~~~~~~~i~~L~p~~~y-~~~v~a~~~~g~~~  108 (197)
                      ...      .....  ..  .....+.|.++...... .|.|.|.|..|...
T Consensus       270 g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~  321 (329)
T 3oq3_B          270 SGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKT  321 (329)
T ss_dssp             TSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEE
T ss_pred             CeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceE
Confidence            111      00000  01  13456889999888888 89999999887643

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=97.46  E-value=0.00035  Score=42.05  Aligned_cols=30  Identities=23%  Similarity=0.181  Sum_probs=24.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...++|.||+|++.|.|.|+|......+.+
T Consensus        58 ~t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p   87 (104)
T 2dle_A           58 EPRAVIPGLRSSTFYNITVCPVLGDIEGTP   87 (104)
T ss_dssp             SSEEECCSCCSSCEEEEEEEEESSSCCCBC
T ss_pred             CCEEEECCCCCCCEEEEEEEEEECCcccCC
Confidence            457999999999999999999965555544

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=97.45  E-value=0.00014  Score=43.74  Aligned_cols=38  Identities=13%  Similarity=0.024  Sum_probs=32.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|+..+|.+|+.|.++|+|.|..|.|..+..+...+
T Consensus        56 ~tsy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~   93 (103)
T 3mpc_A           56 STNYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY   93 (103)
T ss_dssp             SSEEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred             CCEEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence            45799999999999999999999888888777665544

>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=97.44  E-value=0.0085  Score=42.12  Aligned_cols=109  Identities=12%  Similarity=0.058  Sum_probs=63.9

Q ss_pred             CCeeEEEEEEeCCC-----CceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFG-----KDDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|+|.+.|..+     ..+..+.+.+...+..|.+....    .....++|.|....  . + ..  +.|...+...
T Consensus        73 DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~--~-~-~~--~~w~k~g~~~  146 (257)
T 1b6u_A           73 LAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRS--S-Y-DM--YHLSREGEAH  146 (257)
T ss_dssp             TCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSS--C-C-SE--EEEEETTSSC
T ss_pred             cCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCC--C-C-cE--EEEEECCccc
Confidence            57999999987532     23456777887766666644322    34678999998643  1 2 22  3343322221


Q ss_pred             EEE----Ee--CCcccEEEECCCCCCCEEEEEEEEEcCCc---CCCCCCceEeec
Q psy9139          72 QSV----HV--DAEYREFTLTQLKCGTHYKINIKLVNSIG---ESKPSKTIAAST  117 (197)
Q Consensus        72 ~~~----~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~g---~~~~s~~~~~~t  117 (197)
                      ...    ..  ......+.|.++.  ....|+|.+.+...   .+.++..+.+..
T Consensus       147 ~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V  199 (257)
T 1b6u_A          147 ERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSV  199 (257)
T ss_dssp             EECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECC
T ss_pred             CcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEE
Confidence            110    00  1235568888887  67888999987542   345566555544

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=97.44  E-value=0.00026  Score=50.81  Aligned_cols=102  Identities=16%  Similarity=0.151  Sum_probs=57.0

Q ss_pred             CCeeEEEEEEeCCCCceeE-EEEEecCCCCCCEEEEE-----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE-
Q psy9139           1 MVGNYTCLADNIFGKDDIY-YQVTILSPPGVPNILLQ-----STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS-   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~-~~~~~~~~P~~p~~~~~-----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~-   73 (197)
                      +.|.|+|.|.|..|..... ..+.+...+.+|.+...     ......+.|.|.....+..     .+.|...+..... 
T Consensus       175 d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-----~v~W~~~~~~l~~~  249 (304)
T 2yd9_A          175 DQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP-----YVKWMQGAEDLTPE  249 (304)
T ss_dssp             GCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC-----EEEEEETTEECSCS
T ss_pred             cCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC-----EEEEEECCEECCCc
Confidence            4799999999999975533 55666555555543221     2335678888876321111     2445422110000 


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .........+.+.+++  ....|.|.|.|..|....
T Consensus       250 ~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~G~~~~  283 (304)
T 2yd9_A          250 DDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIEA  283 (304)
T ss_dssp             SSCCBSEEEEEECSCC--SCEEEEEEEEETTEEEEE
T ss_pred             ccccCCcEEEEEcccc--cCEEEEEEEEeCCCcEEE
Confidence            0011223346666665  457889999999887543

>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}

Probab=97.44  E-value=0.0014  Score=43.85  Aligned_cols=97  Identities=8%  Similarity=0.086  Sum_probs=57.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEe---ecCC-eEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQS---TTTH-SISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV   76 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~---~~~~-~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~   76 (197)
                      ++|.|+|.|.|..|.....+.|.|..+|..|.+....   .... .+.|.|.....+..+    .+.|.....   .+. 
T Consensus        81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p----~i~W~~~g~---~l~-  152 (193)
T 2if7_A           81 DTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNV----SFRWEALGN---TLS-  152 (193)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTC----EEEEEETTE---EEE-
T ss_pred             cCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCce----EEEEEeCCE---EcC-
Confidence            4799999999999876677888888777666543321   1223 689999874311111    345553221   111 


Q ss_pred             CCcccEEEEC-CCCCCCEEEEEEEEEcCCcCC
Q psy9139          77 DAEYREFTLT-QLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        77 ~~~~~~~~i~-~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .  ...+.|. .........|.|.|.|..|..
T Consensus       153 ~--~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~  182 (193)
T 2if7_A          153 S--QPNLTVSWDPRISSEQDYTCIAENAVSNL  182 (193)
T ss_dssp             S--SSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred             C--CCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence            1  1234442 122224568889999988764

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=97.43  E-value=0.00013  Score=56.81  Aligned_cols=100  Identities=8%  Similarity=-0.090  Sum_probs=56.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC---C-EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE-EE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV---P-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS-VH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~---p-~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~-~~   75 (197)
                      ++|.|+|.|.|.   ....+.+.+..+|..   | ...........+.|.+.....+..     .+.|......... ..
T Consensus       301 DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-----~i~W~k~g~~l~~~~~  372 (527)
T 3qs9_E          301 DTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI-----RCTWTFSRKSFPCEQK  372 (527)
T ss_dssp             GCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCC-----EEEEEETTEEEECBCC
T ss_pred             cCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCC-----EEEEEECCEECcCCcc
Confidence            579999999998   566777777766521   1 111222344667777765322221     2444322110000 00


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .......+.|.++.......|.|.|.|..|...
T Consensus       373 ~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~  405 (527)
T 3qs9_E          373 GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT  405 (527)
T ss_dssp             BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred             cccCCcEEEEecCCcccCEEEEEEEEeCCCcEE
Confidence            112345678888888888888899999887543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.43  E-value=9e-05  Score=58.35  Aligned_cols=32  Identities=28%  Similarity=0.324  Sum_probs=28.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .+.|++.+|.||+.|.|||+|.|.+|.|+++.
T Consensus        64 ~t~~~V~~L~~g~~Y~FRV~A~N~~G~s~PS~   95 (573)
T 3uto_A           64 YTYTTIEGLRAGKQYEFRIIAENKHGQSKPCE   95 (573)
T ss_dssp             SSEEEECCCCTTCEEEEEEEEEETTEECCCCC
T ss_pred             CCEEEeCCCCCCCcEeEEEEEEcCceEcCCcC
Confidence            56899999999999999999999999998543

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=97.41  E-value=2.1e-05  Score=57.09  Aligned_cols=101  Identities=12%  Similarity=0.108  Sum_probs=61.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEE----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE-EEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILL----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-SVH   75 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~-~~~   75 (197)
                      +.|.|+|.|.|..|..+..+.+.+..+|... +..    .......+.|.|.....+. + .  .+.|...+.... ...
T Consensus       205 d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~-p-~--~i~W~~~~~~~~~~~~  279 (331)
T 3u83_A          205 HQQSLACIVNYHMDRFKESLTLNVQYEPEVT-IEGFDGNWYLQRMDVKLTCKADANPP-A-T--EYHWTTLNGSLPKGVE  279 (331)
T ss_dssp             TTCEEEEEEEETTEEEEEEEECCEEEEEEEE-EECCCSCCBTTCCCEEEEEEEEEESC-C-C--EEEEEETTBSCCTTEE
T ss_pred             CCCEEEEEEecCCCcceeeEEEEEecCCeEE-EecCCCceEeCCCeEEEEEeCcCCCC-C-C--EEEEEECCCcccccce
Confidence            5799999999999987777777776555311 110    0123467888887632111 1 1  244542221100 001


Q ss_pred             eCCcccEEEEC-CCCCCCEEEEEEEEEcCCcCCC
Q psy9139          76 VDAEYREFTLT-QLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        76 ~~~~~~~~~i~-~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                        .....+.|. ++.......|.|.|.|..|...
T Consensus       280 --~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~  311 (331)
T 3u83_A          280 --AQNRTLFFKGPINYSLAGTYICEATNPIGTRS  311 (331)
T ss_dssp             --EETTEEEECSCCCGGGCEEEEEEEEETTEEEE
T ss_pred             --ecCcEEEEeCCCccccCeEEEEEEEeccccce
Confidence              123568888 8888889999999999998754

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*

Probab=97.38  E-value=0.00053  Score=45.01  Aligned_cols=95  Identities=9%  Similarity=-0.004  Sum_probs=56.6

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEE---EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNIL---LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD   77 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~---~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~   77 (197)
                      ++|.|+|.+.|..++  ..+.+.+..+|  +.+.   ........+.|.|.....  .+.  ..+.|...+...   ...
T Consensus        65 d~G~Y~C~~~n~~~s--~~~~l~V~~~~--~~~~~~~~~~~~g~~~~l~C~~~~~--~~~--~~~~W~k~g~~~---~~~  133 (175)
T 1fnl_A           65 DSGEYRCQTNLSTLS--DPVQLEVHIGW--LLLQAPRWVFKEEDPIHLRCHSWKN--TAL--HKVTYLQNGKDR---KYF  133 (175)
T ss_dssp             GCEEEEEECSSSCCC--CCEEEEEECSS--EEEECSCSEEETTCCEEEEEEECTT--CCC--EEEEEEETTEEE---EEE
T ss_pred             cCEEEEEEeeCCccc--ccEEEEEeCCC--ceeeCCCceecCCCCEEEEEEcCCC--CCc--eEEEEEECCeEc---cCC
Confidence            579999999996654  34555555322  1111   112346678888876432  121  235554332211   112


Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .....+.|.++.......|.|.|.|..|.
T Consensus       134 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~  162 (175)
T 1fnl_A          134 HHNSDFHIPKATLKDSGSYFCRGLVGSKN  162 (175)
T ss_dssp             EECCCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             CCCCEEEEcccChhhCeEEEEEEEcCCCC
Confidence            23456899999999999999999997653

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A

Probab=97.37  E-value=0.0014  Score=42.50  Aligned_cols=97  Identities=14%  Similarity=0.022  Sum_probs=57.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      +.|.|+|.+.|..++.  .+.+.+..+|.... ..........+.|.|....  +.+  ...+.|...+.   .+.....
T Consensus        62 d~G~Y~C~~~~~~~s~--~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~p--~~~~~W~~~g~---~~~~~~~  132 (170)
T 3ry4_A           62 DSGEYTCQTGQTSLSD--PVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWK--DKP--LVKVTFFQNGK---SQKFSHL  132 (170)
T ss_dssp             GCEEEEEEETTSBCCC--CEEEEEECCSEEEECSCSEECTTCCEEEEEEEGG--GCC--EEEEEEEETTE---EEEEESS
T ss_pred             cCeEEEEEEeCCCceE--eEEEEEECCceEecCCCceeecCCeEEEEEECCC--CCC--CceEEEEECCe---EccccCC
Confidence            5799999999865543  45555555431111 0111134567888887632  112  13455543221   1222334


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ...+.|.++.......|.|.+.|..|.
T Consensus       133 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~  159 (170)
T 3ry4_A          133 DPTFSIPQANHSHSGDYHCTGNIGYTL  159 (170)
T ss_dssp             CCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             CCeEEEEeccccCCEEEEEEEEeCcCc
Confidence            567899999999999999999998874

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=97.36  E-value=0.001  Score=47.21  Aligned_cols=105  Identities=16%  Similarity=0.121  Sum_probs=64.2

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCC-CCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC---
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPP-GVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTED---   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P-~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~---   70 (197)
                      +.|.|+|.|.|..|.. +..+.+.+...+ .+|.+....     .....+.|.|....  ..+  -+.+.|......   
T Consensus       155 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~--~~~--~~~~~w~~~~~~~~~  230 (292)
T 4dkd_C          155 QSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASS--VDV--NFDVFLQHNNTKLAI  230 (292)
T ss_dssp             GCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEE--SSS--CCEEECCBSSCCCCC
T ss_pred             HCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecC--CCC--ceEEEEeCCCccccc
Confidence            4799999999998864 347778877543 466533322     24567888887642  111  123444322111   


Q ss_pred             -cEEEEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          71 -WQSVHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        71 -~~~~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                       ........   ....+.|.++.......|.|.|.|..|....
T Consensus       231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~  273 (292)
T 4dkd_C          231 PQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHST  273 (292)
T ss_dssp             CBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred             CccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCcee
Confidence             11111111   2246889999999999999999999886443

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.34  E-value=0.00035  Score=42.34  Aligned_cols=28  Identities=14%  Similarity=0.265  Sum_probs=24.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      ...+.|.+|+|++.|.|+|+|.+. |.|.
T Consensus        66 ~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~   93 (109)
T 1uc6_A           66 GTAHTITDAYAGKEYIIQVAAKDN-EIGT   93 (109)
T ss_dssp             CSEEEETTCCSSSCEEEEEECCBS-SSCC
T ss_pred             CCEEEEeCCCCCCEEEEEEEEEeC-CCCC
Confidence            457999999999999999999985 6654

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=97.32  E-value=0.00086  Score=48.21  Aligned_cols=104  Identities=17%  Similarity=0.238  Sum_probs=60.1

Q ss_pred             CCeeEEEEEE-eCCCCc---eeEEEEEecCC--CCCCEE------EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-
Q psy9139           1 MVGNYTCLAD-NIFGKD---DIYYQVTILSP--PGVPNI------LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-   67 (197)
Q Consensus         1 ~~g~y~c~a~-n~~G~~---~~~~~~~~~~~--P~~p~~------~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-   67 (197)
                      ++|.|+|.|. |..|..   ...+.+.+..+  +.+|.+      .+.......+.|.|.....+...     +.|... 
T Consensus       173 d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~-----i~W~~~g  247 (315)
T 1itb_B          173 HRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI-----AYWKWNG  247 (315)
T ss_dssp             GCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSE-----EEEEETT
T ss_pred             hCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCe-----eEEEECC
Confidence            5799999999 888965   33444434322  344442      12334567788888763222222     334311 


Q ss_pred             ----CCC-c---EEEEeCC--------cccEEEECCCCCCC-EEEEEEEEEcCCcCCCC
Q psy9139          68 ----TED-W---QSVHVDA--------EYREFTLTQLKCGT-HYKINIKLVNSIGESKP  109 (197)
Q Consensus        68 ----~~~-~---~~~~~~~--------~~~~~~i~~L~p~~-~y~~~v~a~~~~g~~~~  109 (197)
                          ... .   .......        ....+.|.++.... ...|.|.|.|..|....
T Consensus       248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~  306 (315)
T 1itb_B          248 SVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAA  306 (315)
T ss_dssp             EECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEE
T ss_pred             EECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeE
Confidence                111 0   1111111        12378999999888 88899999999987643

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=97.32  E-value=0.00023  Score=53.95  Aligned_cols=92  Identities=15%  Similarity=0.125  Sum_probs=54.1

Q ss_pred             CCe--eEEEEEEeCCCCceeEEEEEecCCCCCCEEEE---EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE
Q psy9139           1 MVG--NYTCLADNIFGKDDIYYQVTILSPPGVPNILL---QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH   75 (197)
Q Consensus         1 ~~g--~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~---~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~   75 (197)
                      +.|  .|+|.|.|..|.....+.+.+...|. |.+..   .......+.|.|...  +...     +.| +  +..  +.
T Consensus       255 d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~-p~i~~~~~~v~~G~~v~l~C~~~--p~p~-----i~W-~--g~~--~~  321 (450)
T 1z7z_I          255 DEGTQRLTCAVILGNQSQETLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEAH--PRAK-----VTL-N--GVP--AQ  321 (450)
T ss_dssp             GCEEEEEEEEEEETTEEEEEEEEEEEECCCC-CEEEESCSEEETTCEEEEEEEC--------------------------
T ss_pred             hCCcEEEEEEEccCCccEEEEEEEEEecCCC-CeEecCCeeEeCCCcEEEEEecC--CCCE-----eEE-C--CEE--cC
Confidence            478  99999999999888888888887665 54332   223467788888764  2222     334 1  110  01


Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .......+.|..+.......|.|.|.|..+
T Consensus       322 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~  351 (450)
T 1z7z_I          322 PLGPRAQLLLKATPEDNGRSFSCSATLEVA  351 (450)
T ss_dssp             --CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred             CCCceEEEEEecCcccCCceEEEEEEcCCC
Confidence            122334577777777666677788875443

>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A

Probab=97.31  E-value=0.0012  Score=45.05  Aligned_cols=49  Identities=8%  Similarity=0.173  Sum_probs=36.7

Q ss_pred             CCeeEEEEEEeCC-CCceeEEEEEecCCCCCCEEEEEee-----cCCeE-EEEeee
Q psy9139           1 MVGNYTCLADNIF-GKDDIYYQVTILSPPGVPNILLQST-----TTHSI-SILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~-G~~~~~~~~~~~~~P~~p~~~~~~~-----~~~~~-~l~W~~   49 (197)
                      ++|.|+|.|.|.. |..+..+.+.+..+|..|.+.....     ....+ .|.|..
T Consensus        88 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~  143 (231)
T 2pet_A           88 DERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNS  143 (231)
T ss_dssp             GCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEE
T ss_pred             cCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEe
Confidence            4799999999997 7778888999999988887443321     23444 888876

>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I

Probab=97.29  E-value=0.0051  Score=42.50  Aligned_cols=80  Identities=11%  Similarity=0.212  Sum_probs=53.4

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-C--CCCcEEEEeCCcccEEEECCC--CCCCEEEEEEEEEc
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-R--TEDWQSVHVDAEYREFTLTQL--KCGTHYKINIKLVN  102 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~--~~~~~~~~~~~~~~~~~i~~L--~p~~~y~~~v~a~~  102 (197)
                      |.|.++.+.+ ..-...|.|+++..+.  ...|.|+|+. .  .+.|.........+.+.|++.  .....|..||+|..
T Consensus        13 p~P~NV~~~S-~Nf~~iL~W~p~~~~~--~~~YtVqy~~y~~~~~~W~~~C~~it~~~CDlT~~~~d~~~~y~~RVrA~~   89 (229)
T 1fyh_B           13 PTPTNVTIES-YNMNPIVYWEYQIMPQ--VPVFTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKARV   89 (229)
T ss_dssp             CCCEEEEEEC-BSSCCEEEEECCCCSS--CCEEEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEEE
T ss_pred             CCCcEEEEEE-ECCeeEEEECCCCCCC--CeEEEEEEEeccCccchhHhhCcCCCCCEEeCCCccccCceeEEEEEEEEc
Confidence            3333355543 3445679999976422  3679999983 3  457986555566678888774  46678999999997


Q ss_pred             CCcCCCCC
Q psy9139         103 SIGESKPS  110 (197)
Q Consensus       103 ~~g~~~~s  110 (197)
                      ....+.+.
T Consensus        90 g~~~S~w~   97 (229)
T 1fyh_B           90 GQKESAYA   97 (229)
T ss_dssp             TTEECCCE
T ss_pred             CCcccCCE
Confidence            76555543

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4

Probab=97.29  E-value=0.00016  Score=44.31  Aligned_cols=30  Identities=30%  Similarity=0.336  Sum_probs=26.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV   30 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~   30 (197)
                      ++|.|+|.|.|..|.....+.+.+...|..
T Consensus        76 d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~  105 (118)
T 1wwc_A           76 NNGNYTLIAKNPLGTANQTINGHFLKEPFP  105 (118)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEECCSCCCCC
T ss_pred             cCEEEEEEEECCCCeEeeEEEEEEccCCCc
Confidence            479999999999999999998888877744

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=97.29  E-value=0.00064  Score=48.30  Aligned_cols=103  Identities=6%  Similarity=-0.018  Sum_probs=60.8

Q ss_pred             CCe-eEEEEEEeCCCCc-eeEEEEEecC-CCCCCEEEE-----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--
Q psy9139           1 MVG-NYTCLADNIFGKD-DIYYQVTILS-PPGVPNILL-----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--   70 (197)
Q Consensus         1 ~~g-~y~c~a~n~~G~~-~~~~~~~~~~-~P~~p~~~~-----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--   70 (197)
                      +.| .|+|.|.|..|.. +..+.+.+.. +..+|.+..     .......+.|.|.....+ .+.   .+.|......  
T Consensus       156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p-~p~---~i~W~~~~~~~~  231 (290)
T 2o26_X          156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVS-TSV---NSMWLKMNPQPQ  231 (290)
T ss_dssp             GTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESS-TTC---EEEEEEESSSEE
T ss_pred             HCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCC-cce---eEEEecCCCCCc
Confidence            479 9999999996653 3356777663 334454322     123456788888764221 121   2334321111  


Q ss_pred             ----c---EEEE---eCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          71 ----W---QSVH---VDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        71 ----~---~~~~---~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                          .   ....   .......+.|.++.......|.|.|.|..|..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~  278 (290)
T 2o26_X          232 HIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSA  278 (290)
T ss_dssp             ECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred             cceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence                0   0000   11224568999999999999999999998865

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=97.27  E-value=0.0052  Score=47.52  Aligned_cols=103  Identities=14%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             CCeeEEEEEEeCCCC---ceeEEEEEecCCC-CCCEEEEE-----eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGK---DDIYYQVTILSPP-GVPNILLQ-----STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~---~~~~~~~~~~~~P-~~p~~~~~-----~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|+|.|.|..|.   ....+.+.+...+ .+|.+.+.     ......+.|.|........   ...+.|.......
T Consensus        81 D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~---~~~v~W~k~g~~l  157 (523)
T 2rcj_C           81 DESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPG---AVTVAWKADGSPV  157 (523)
T ss_pred             hCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCC---ceEEEEecCCCCC
Confidence            479999999998874   2244566664332 34432211     1234578888876421111   1235554221110


Q ss_pred             ----EEE--EeCCc-----ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          72 ----QSV--HVDAE-----YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        72 ----~~~--~~~~~-----~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                          ...  ....+     ...+.|..........|.|.+.|..|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~  203 (523)
T 2rcj_C          158 KAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST  203 (523)
T ss_pred             CCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcc
Confidence                000  00111     124778887777777888888887664

>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H

Probab=97.24  E-value=0.0082  Score=41.97  Aligned_cols=100  Identities=12%  Similarity=0.021  Sum_probs=57.3

Q ss_pred             CCeeEEEEEEeCCCC-----ceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCCCc-----cccEEEEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGK-----DDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDGGA-----IITHYIVSYRDRT   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-----~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~~~-----~i~~y~v~~~~~~   68 (197)
                      ++|.|+|.|.|..|.     ....+.+.|...|....  -.+......++.|.|........     .+.||+-   ...
T Consensus        90 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~---~~g  166 (256)
T 1nqb_A           90 DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQ---KPG  166 (256)
T ss_dssp             GCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE---CTT
T ss_pred             hCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEE---CCC
Confidence            479999999999773     12345666665543111  11222456778898886432211     3343331   011


Q ss_pred             CC-----------------cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          69 ED-----------------WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        69 ~~-----------------~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..                 ............++|.++.+.....|.|.+.+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~  218 (256)
T 1nqb_A          167 QSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSH  218 (256)
T ss_dssp             SCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred             CCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence            11                 111111233456899999999999999999874

>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1

Probab=97.24  E-value=0.0064  Score=42.03  Aligned_cols=101  Identities=14%  Similarity=0.044  Sum_probs=58.4

Q ss_pred             CCeeEEEEEEeCCCC--ceeEEEEEecCCCC------------CCEEE-----EEeecCCeEEEEeeeCCCCCccccEEE
Q psy9139           1 MVGNYTCLADNIFGK--DDIYYQVTILSPPG------------VPNIL-----LQSTTTHSISILWKPSYDGGAIITHYI   61 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~--~~~~~~~~~~~~P~------------~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~   61 (197)
                      ++|.|+|.|.|..+.  ......+.+...|.            ++.+.     +.......+.|.|.........+.||+
T Consensus        92 D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k  171 (247)
T 2ghw_B           92 DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQ  171 (247)
T ss_dssp             GCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEE
T ss_pred             HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEE
Confidence            479999999998432  22345667765531            22221     223456788999987443222344443


Q ss_pred             EEEEeCCC-----------------CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          62 VSYRDRTE-----------------DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        62 v~~~~~~~-----------------~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      -   ....                 .............++|.++.......|.|.+.+..
T Consensus       172 ~---~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~  228 (247)
T 2ghw_B          172 Q---KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW  228 (247)
T ss_dssp             E---CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred             E---CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence            1   0111                 11111212334568999999999999999998753

>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}

Probab=97.24  E-value=7.4e-05  Score=51.01  Aligned_cols=104  Identities=13%  Similarity=0.199  Sum_probs=57.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEe----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-----
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQS----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-----   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-----   71 (197)
                      ++|.|+|.+.|. |..+..+.+.+..++..|.+....    .....+.|.|....  +.+..  .+.|....+..     
T Consensus        83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~--g~P~~--~v~W~~~~~~~~~~~~  157 (222)
T 4i0k_A           83 DEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQ--GYPEA--EVFWKDGQGVPLTGNV  157 (222)
T ss_dssp             GCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEE--EBSCC--EEEEECTTSCBCCSEE
T ss_pred             cCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEeccc--ccCCC--eEEEEcCCCccCCCCc
Confidence            479999999986 455566677777776666533221    23467788887622  11111  24454322111     


Q ss_pred             EEEE-eCCc--ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          72 QSVH-VDAE--YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        72 ~~~~-~~~~--~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .... ....  ...+.+.++.......|.|.+.|..|....
T Consensus       158 ~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~  198 (222)
T 4i0k_A          158 TTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDA  198 (222)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEE
T ss_pred             ceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCce
Confidence            1111 1111  122455566666666888999998876543

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.24  E-value=0.00028  Score=41.81  Aligned_cols=31  Identities=23%  Similarity=0.442  Sum_probs=25.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP   31 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p   31 (197)
                      ++|.|+|.|.|..|.....+.+.+...|..+
T Consensus        65 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~s~   95 (99)
T 2cr3_A           65 DSGLYACVTSSPSGSDTTYFSVNVSDALPSG   95 (99)
T ss_dssp             TCEEEEEEEEETTEEEEEEEEECBCSCCSCC
T ss_pred             HCEEEEEEEEeCCceEEEEEEEEEecCCCCc
Confidence            5799999999999998888888887766543

>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*

Probab=97.23  E-value=0.0022  Score=44.46  Aligned_cols=29  Identities=21%  Similarity=0.269  Sum_probs=24.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPG   29 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~   29 (197)
                      ++|.|+|.+.|..|.....+.|.+..+|.
T Consensus        93 D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~  121 (248)
T 3pv7_A           93 EAGEYRCEVVVTPLKAQGTVQLEVVASPA  121 (248)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred             HCeEEEEEEEeCCccceeEEEEEEecCCc
Confidence            47999999999988877788888877553

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*

Probab=97.22  E-value=0.00072  Score=44.36  Aligned_cols=96  Identities=10%  Similarity=-0.016  Sum_probs=56.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAE   79 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~   79 (197)
                      ++|.|+|.+.|..++.  .+.+.+..++.... ..........+.|.|....  +.+.  -.+.|.....   .+.....
T Consensus        62 d~G~Y~C~~~~~~~s~--~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~p~--~~~~W~~~g~---~~~~~~~  132 (176)
T 1f2q_A           62 DSGEYKCQHQQVNESE--PVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWR--NWDV--YKVIYYKDGE---ALKYWYE  132 (176)
T ss_dssp             GCEEEEEECTTSSCCC--CEEEEEECSSEEEEESCSEEETTSCEEEEEEEGG--GCCE--EEEEEEETTE---ECCSCCC
T ss_pred             cCEEEEEEcCCccccc--cEEEEEeCcceeecCCcceeeCCCCEEEEEEecC--CCCc--eEEEEEECCE---EEeeecC
Confidence            5799999999877654  34445542221000 0011135677888887632  1221  2455553221   1122334


Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ...+.|.++.......|.|.+.|..+
T Consensus       133 ~~~L~i~~v~~~d~G~Y~C~a~n~~~  158 (176)
T 1f2q_A          133 NHNISITNATVEDSGTYYCTGKVWQL  158 (176)
T ss_dssp             SSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred             CCeEEECCCCcccCEEEEEEEEeCCc
Confidence            56899999999999999999999744

>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}

Probab=97.22  E-value=0.00038  Score=40.79  Aligned_cols=30  Identities=17%  Similarity=0.317  Sum_probs=24.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV   30 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~   30 (197)
                      ++|.|+|.|.|..|.....+.+.+..++..
T Consensus        62 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~   91 (95)
T 4hwu_A           62 DSGLYACTAARTVDSETWIFMVNVTDAAEN   91 (95)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEECCC---
T ss_pred             cCEEEEEEEccCCCcEEEEEEEEEeCCccc
Confidence            479999999999998888888888877643

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...

Probab=97.20  E-value=0.00064  Score=44.91  Aligned_cols=92  Identities=10%  Similarity=0.104  Sum_probs=57.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY   80 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~   80 (197)
                      ++|.|+|.+.|..|.    +.+.+..++.++...+  .....+.|.|.....+.     -.+.|.......     ....
T Consensus        79 D~G~Y~C~~~~~~~~----~~l~V~~~~~~~~~~v--~~g~~~~l~C~~~~~p~-----~~v~W~~~~~~~-----~~~~  142 (184)
T 2ny1_B           79 DSDTYICEVEDQKEE----VQLLVFGLTANSDTHL--LQGQSLTLTLESPPGSS-----PSVQCRSPRGKN-----IQGG  142 (184)
T ss_dssp             GCEEEEEEETTEEEE----EEEEEEEEEESSCSEE--ETTCCEEEEEECCTTCC-----CEEEEECTTSCE-----EEES
T ss_pred             HCEEEEEEEEcCCCc----EEEEEEEecCCCCcee--ecCCCEEEEEEcCCCCC-----CEEEEEeCCCcc-----ccCc
Confidence            579999999988663    3344333222222111  35667888888744221     245565433321     1234


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ..+.|.++.......|.|.+.|..|...
T Consensus       143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~~  170 (184)
T 2ny1_B          143 KTLSVSQLELQDSGTWTCTVLQNQKKVE  170 (184)
T ss_dssp             SEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             eEEEEecCCcCCCeEEEEEEEECCceEE
Confidence            5789999999989999999998766543

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=97.14  E-value=0.0019  Score=48.94  Aligned_cols=103  Identities=8%  Similarity=-0.012  Sum_probs=63.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEE---EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE-e
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNIL---LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH-V   76 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~---~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~-~   76 (197)
                      ++| |+|.|.|..|..+..+.+.+..+|......   ........+.|.|.....  .+...+.+.|...+....... .
T Consensus        60 d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~--~~~~~~~v~W~k~g~~l~~~~~~  136 (450)
T 1z7z_I           60 DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGG--APRANLTVVLLRGEKELKREPAV  136 (450)
T ss_dssp             CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECC--BCGGGEEEEEEETTEEEEEEECC
T ss_pred             CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCC--CCCcCcEEEEeeCCEEeeccccc
Confidence            367 999998887777777788887766433211   122446788999987432  222223456653322111111 1


Q ss_pred             -CCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          77 -DAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        77 -~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                       ......+.|..+.......|.|.+.|..|.
T Consensus       137 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~  167 (450)
T 1z7z_I          137 GEPAEVTTTVLVRRDHHGANFSCRTELDLRP  167 (450)
T ss_dssp             TTTEEEEEEEECCSSCSSCEEEEEEEEECGG
T ss_pred             ccccceEEEEEeeccccCceEEEEEEcccCC
Confidence             122346888888888888999999988763

>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A

Probab=97.13  E-value=0.0059  Score=41.10  Aligned_cols=104  Identities=9%  Similarity=-0.010  Sum_probs=59.6

Q ss_pred             CCeeEEEEEEeCCCCc----eeEEEEEecCCCCCCEEEEE--eecCCeEEEEeeeCCC-CCccccEEEEEEEeCCCCcEE
Q psy9139           1 MVGNYTCLADNIFGKD----DIYYQVTILSPPGVPNILLQ--STTTHSISILWKPSYD-GGAIITHYIVSYRDRTEDWQS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~----~~~~~~~~~~~P~~p~~~~~--~~~~~~~~l~W~~~~~-~~~~i~~y~v~~~~~~~~~~~   73 (197)
                      ++|.|+|.+.|..|..    +..+.+.+..+|.+|.+...  ......+.|.|..... .+.+..  .+.|.........
T Consensus        93 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p--~v~W~~~~~~~~~  170 (214)
T 2zg1_A           93 DTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPL--TFSWTGNALSPLD  170 (214)
T ss_dssp             GCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCC--EEEEESSTTSSSC
T ss_pred             hCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCc--eEEEeCCCCccCC
Confidence            4799999999986422    24677888888877764322  1345678999987431 111211  3556532211000


Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                       ........+.|..........|.|.|.|..+..
T Consensus       171 -~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~  203 (214)
T 2zg1_A          171 -PETTRSSELTLTPRPEDHGTNLTCQMKRQGAQV  203 (214)
T ss_dssp             -SSCCCSSEEEECCCTTCCSCEEEEEEECC----
T ss_pred             -CCceeEEEEEEecccHHcCcEEEEEEEeCCCCc
Confidence             001334567887776666668889999876443

>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A

Probab=97.10  E-value=0.0032  Score=49.38  Aligned_cols=49  Identities=24%  Similarity=0.309  Sum_probs=34.8

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCEEEE----EeecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPNILL----QSTTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~~~~----~~~~~~~~~l~W~~   49 (197)
                      ++|.|+|.+.|..|.. ...+.+.|..+|..|.+..    .......+.|.|..
T Consensus       443 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~  496 (581)
T 3o3u_N          443 DEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVS  496 (581)
T ss_dssp             GCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEE
T ss_pred             cCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEEC
Confidence            4799999999999987 7788899988888776321    11223344557765

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A

Probab=97.08  E-value=0.0034  Score=41.70  Aligned_cols=94  Identities=11%  Similarity=0.048  Sum_probs=56.3

Q ss_pred             CCeeEEEEEEeCCCCce--eEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKDD--IYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDA   78 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~--~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~   78 (197)
                      ++|.|+|.|.|..|...  ..+.+.|..+...|.+...   ...+.|.|.....+  ++   .+.|...+...   ... 
T Consensus        77 DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~---~~~v~L~C~~~~~p--~~---~~~W~~~g~~l---~~~-  144 (182)
T 1hnf_A           77 DQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWT---CINTTLTCEVMNGT--DP---ELNLYQDGKHL---KLS-  144 (182)
T ss_dssp             GCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEEE---TTTTEEEEECSSCS--SC---EEEEEESSCEE---EEE-
T ss_pred             hCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEEc---cCcEEEEeEccCCC--CC---EEEEEECCEEC---CCC-
Confidence            47999999999999753  4667888877777764432   23688888864322  21   24454322211   111 


Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                       ...+.+. +.......|.|.|.|..|...
T Consensus       145 -~~~i~~~-~~~~d~G~Y~C~a~N~~~~~~  172 (182)
T 1hnf_A          145 -QRVITHK-WTTSLSAKFKCTAGNKVSKES  172 (182)
T ss_dssp             -SSCEEEE-CCSCEEEEEEEEEECSSCEEE
T ss_pred             -CcEEEEe-cccCCCcEEEEEEEeCCCCcE
Confidence             1112222 134567889999999987643

>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}

Probab=97.06  E-value=0.0073  Score=42.14  Aligned_cols=28  Identities=14%  Similarity=-0.059  Sum_probs=23.5

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ....++|.++.+.....|.|.+.|..|.
T Consensus       208 ~~~~L~I~~v~~~DsG~Y~C~a~n~~g~  235 (256)
T 3tf7_C          208 EDFFLTLESASPSQTSLYFCASSDAPGQ  235 (256)
T ss_dssp             SBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred             CeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence            3457999999999999999999987663

>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D

Probab=97.05  E-value=0.008  Score=41.89  Aligned_cols=104  Identities=16%  Similarity=0.048  Sum_probs=57.2

Q ss_pred             CCeeEEEEEEeC----CCCceeEEEEEecCCC-------------CCCEEE-----EEeecCCeEEEEeeeCCCCCcccc
Q psy9139           1 MVGNYTCLADNI----FGKDDIYYQVTILSPP-------------GVPNIL-----LQSTTTHSISILWKPSYDGGAIIT   58 (197)
Q Consensus         1 ~~g~y~c~a~n~----~G~~~~~~~~~~~~~P-------------~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~   58 (197)
                      ++|.|.|.+.|.    .+.....+.+.|...+             .+|.+.     .......++.|.|.........+.
T Consensus        92 DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~  171 (256)
T 3umt_A           92 DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLN  171 (256)
T ss_dssp             GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEE
T ss_pred             cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEE
Confidence            479999999998    3333344566666421             122211     223456788999887543222344


Q ss_pred             EEEE------EEE-e-------CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          59 HYIV------SYR-D-------RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        59 ~y~v------~~~-~-------~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ||+-      ... .       ................++|.++.+.....|.|.+.+..
T Consensus       172 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~  231 (256)
T 3umt_A          172 WLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASS  231 (256)
T ss_dssp             EEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSS
T ss_pred             EEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCC
Confidence            4431      000 0       00011112222334568999999988889999988743

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.03  E-value=0.00039  Score=42.57  Aligned_cols=30  Identities=20%  Similarity=0.231  Sum_probs=25.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGV   30 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~   30 (197)
                      ++|.|+|.|.|..|.....+.+.+..+|.+
T Consensus        73 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~p  102 (118)
T 2eo9_A           73 DTGRYTCIASTPSGEATWSAYIEVQEFGVP  102 (118)
T ss_dssp             GCCCEEEEEECSSCEEEEECCEEEECCSCC
T ss_pred             CCEEEEEEEEcCCCcEEEEEEEEEEeCCCC
Confidence            479999999999999888888888877644

>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=97.01  E-value=0.01  Score=42.12  Aligned_cols=102  Identities=12%  Similarity=0.041  Sum_probs=58.0

Q ss_pred             CCeeEEEEEEeCCCC-----ceeEEEEEecCCCC------------CCEEE-----EEeecCCeEEEEeeeCCCCCcccc
Q psy9139           1 MVGNYTCLADNIFGK-----DDIYYQVTILSPPG------------VPNIL-----LQSTTTHSISILWKPSYDGGAIIT   58 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-----~~~~~~~~~~~~P~------------~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~   58 (197)
                      ++|.|.|.+.|..|.     ....+.+.|...|.            ++.+.     ........+.|.|...... ..+.
T Consensus       116 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~  194 (282)
T 1qok_A          116 DTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMH  194 (282)
T ss_dssp             GCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCE
T ss_pred             hCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEE
Confidence            479999999999872     11334667766542            22221     2234567889999875433 3355


Q ss_pred             EEEE------EEE-e-------CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          59 HYIV------SYR-D-------RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        59 ~y~v------~~~-~-------~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ||+-      .+. .       ................++|.++.+.....|.|.+.+.
T Consensus       195 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~  253 (282)
T 1qok_A          195 WFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSS  253 (282)
T ss_dssp             EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred             EEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeC
Confidence            5441      100 0       0011111122233456899999999999999999874

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}

Probab=96.99  E-value=0.00069  Score=45.14  Aligned_cols=104  Identities=11%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             CCeeEEEEEEeCCCCcee---EEEEEecC----CCCCCEEE-----EEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGKDDI---YYQVTILS----PPGVPNIL-----LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~---~~~~~~~~----~P~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~   68 (197)
                      ++|.|+|.+.|..|....   .+.+.+..    .+.+|.+.     ........+.|.|.....+.   .  .+.|....
T Consensus        77 d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~---p--~v~W~~~~  151 (201)
T 3s97_C           77 DKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV---P--DIRWRKVL  151 (201)
T ss_dssp             GCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESC---C--EEEEEETT
T ss_pred             cCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCC---C--ceEEEeCC
Confidence            579999999998775433   23333322    12233322     12234566788887522111   1  34554221


Q ss_pred             CCcE-EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          69 EDWQ-SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        69 ~~~~-~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .... ..........+.|.++.......|.|.+.|..|....
T Consensus       152 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~  193 (201)
T 3s97_C          152 EPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKH  193 (201)
T ss_dssp             BCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             CcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCCceee
Confidence            1100 0111234567899999999999999999999886543

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=96.97  E-value=0.0017  Score=46.39  Aligned_cols=104  Identities=10%  Similarity=0.017  Sum_probs=56.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec----------------CCCCCCE----EEEEeecCCeEEEEeeeCCCCCccccEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL----------------SPPGVPN----ILLQSTTTHSISILWKPSYDGGAIITHY   60 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~----------------~~P~~p~----~~~~~~~~~~~~l~W~~~~~~~~~i~~y   60 (197)
                      ++|.|+|.|.|..+.......+...                ....+|.    +.........+.|.|.....+.. .   
T Consensus       177 d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~---  252 (312)
T 2y23_A          177 DEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE-T---  252 (312)
T ss_dssp             GCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSS-C---
T ss_pred             cCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCC-C---
Confidence            4799999998755543333222100                0012232    22333456788888887432222 0   


Q ss_pred             EEEEEeCCCCcEE---EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          61 IVSYRDRTEDWQS---VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        61 ~v~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .+.|...+.....   .........+.|.++.......|.|.|.|..|...
T Consensus       253 ~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~  303 (312)
T 2y23_A          253 HIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK  303 (312)
T ss_dssp             EEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEE
T ss_pred             EEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCcee
Confidence            2344322111000   01112345789999999999999999999998654

>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R

Probab=96.97  E-value=0.027  Score=38.41  Aligned_cols=80  Identities=20%  Similarity=0.348  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE--eCCcccEEEECC--CCCCC--EEEEEEE
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH--VDAEYREFTLTQ--LKCGT--HYKINIK   99 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~--~~~~~~~~~i~~--L~p~~--~y~~~v~   99 (197)
                      .|.|.++.+.+ ..-...|.|+++... .....|.++|.. ....|..+.  ....  .+.+++  ++...  .|..||+
T Consensus         5 Lp~P~NV~~~S-~Nf~~iL~W~p~~~~-~~~~~YtVqy~~~~~~~W~~~~~C~~it--~CDlT~~~~d~~~~~~y~~RVr   80 (214)
T 1y6k_R            5 LPSPPSVWFEA-EFFHHILHWTPIPQQ-SESTCYEVALLRYGIESWNSISQCSQTL--SYDLTAVTLDLYHSNGYRARVR   80 (214)
T ss_dssp             CCCCSCEEEEE-ETTEEEEEECCCTTC-CTTCEEEEEEEETTSCCCEEEEEEESSS--EEECGGGGTTGGGSSCEEEEEE
T ss_pred             CCCCceeEEEE-EcCcEEEEECCCCCC-CCCeEEEEEEEEcCCCCCeeCCCCCccc--eEECCCcccccccCccEEEEEE
Confidence            34455455543 345568999996542 234569999984 455698653  2333  888876  45544  8999999


Q ss_pred             EEcCCcCCCCC
Q psy9139         100 LVNSIGESKPS  110 (197)
Q Consensus       100 a~~~~g~~~~s  110 (197)
                      |......+.+.
T Consensus        81 A~~~~~~S~w~   91 (214)
T 1y6k_R           81 AVDGSRHSQWT   91 (214)
T ss_dssp             EEETTEECCCE
T ss_pred             EecCCcccCCE
Confidence            99877666543

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=96.96  E-value=0.00069  Score=49.51  Aligned_cols=108  Identities=13%  Similarity=0.106  Sum_probs=44.4

Q ss_pred             CCeeEEEEEEeCC-CCc---eeEEEEEecCCCC---CCEEEE-------EeecCCeEEEEeeeCCCC-CccccEEEEEEE
Q psy9139           1 MVGNYTCLADNIF-GKD---DIYYQVTILSPPG---VPNILL-------QSTTTHSISILWKPSYDG-GAIITHYIVSYR   65 (197)
Q Consensus         1 ~~g~y~c~a~n~~-G~~---~~~~~~~~~~~P~---~p~~~~-------~~~~~~~~~l~W~~~~~~-~~~i~~y~v~~~   65 (197)
                      ++|.|+|.|.|.. |..   ...+.+.+..++.   +|.+..       .......+.|.|...... +.+.  -.+.|.
T Consensus       188 d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~--p~v~W~  265 (349)
T 4dep_C          188 NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSR--NEVWWT  265 (349)
T ss_dssp             GCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCC--CEEEEE
T ss_pred             CCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCC--CEEEEE
Confidence            5799999999987 543   5666777766432   443110       112344566666653210 1111  134444


Q ss_pred             eCCCCcEE---------EEe--C-Cc---ccEEEECCCCCCCE-EEEEEEEEcCCcCCCCC
Q psy9139          66 DRTEDWQS---------VHV--D-AE---YREFTLTQLKCGTH-YKINIKLVNSIGESKPS  110 (197)
Q Consensus        66 ~~~~~~~~---------~~~--~-~~---~~~~~i~~L~p~~~-y~~~v~a~~~~g~~~~s  110 (197)
                      ........         ...  . ..   ...+.|.++..... ..|.|.|.|..|.....
T Consensus       266 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~  326 (349)
T 4dep_C          266 IDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKA  326 (349)
T ss_dssp             SSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEE
T ss_pred             ECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEE
Confidence            21111000         000  0 11   12377788888888 89999999998865443

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R

Probab=96.95  E-value=0.00071  Score=54.79  Aligned_cols=101  Identities=17%  Similarity=0.100  Sum_probs=25.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE-E----EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE-EE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN-I----LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-SV   74 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~-~----~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~-~~   74 (197)
                      +.|.|+|.|.|..|..+..+.+.+..+|.... .    .........+.|.|.....+...+.     |........ ..
T Consensus       301 d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~-----W~~~g~~l~~~~  375 (772)
T 3v2a_R          301 DQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIK-----WYKNGIPLESNH  375 (772)
T ss_dssp             TCSEEEEEEECSSCEEEEEEEEEEECCCC---------------------------------------------------
T ss_pred             CCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEE-----EEECCEeCCCCc
Confidence            57999999999999888888888888775432 1    1222345567777765322122223     331111100 00


Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ... ....+.|.++.......|.|.+.|..|..
T Consensus       376 ~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~  407 (772)
T 3v2a_R          376 TIK-AGHVLTIMEVSERDTGNYTVILTNPISKE  407 (772)
T ss_dssp             ---------------------------------
T ss_pred             eEc-cceeEEEecCChhcCceEEEEEEECCcCe
Confidence            111 23567778888888888899998887754

>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A

Probab=96.94  E-value=0.012  Score=42.29  Aligned_cols=80  Identities=18%  Similarity=0.180  Sum_probs=56.6

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCc--EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDW--QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~--~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      |..|...........+.|+|...   +..+..|.|... +....|  ....+....+.|+-.++..++.|.|.|.+.+..
T Consensus        18 ~~~~~~L~at~~~~~v~LsWs~s---~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tytDt~~~~GttYyYwVk~~~~n   94 (344)
T 3b4n_A           18 FAAQTTLMLSQKSDVNYLGWSTD---ESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKDADTNSGLNYWYWVDVVSEN   94 (344)
T ss_dssp             --CCEEEEEEEETTEEEEEEEEC---CSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEEECCCCTTCCCEEEEEEEETT
T ss_pred             CCCCceeeeeccCCeEEEEeecC---CCCeeeEEEEccCCCCCCcceEEEeecccccEEEecCcCCCcEEEEEEEEecCC
Confidence            45566333334899999999975   335778888776 344333  334456677899999999999999999999977


Q ss_pred             cCCCCC
Q psy9139         105 GESKPS  110 (197)
Q Consensus       105 g~~~~s  110 (197)
                      |....+
T Consensus        95 gs~~~S  100 (344)
T 3b4n_A           95 QAQVVS  100 (344)
T ss_dssp             CCEEEC
T ss_pred             CcccCC
Confidence            765433

>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B

Probab=96.94  E-value=0.0027  Score=41.61  Aligned_cols=91  Identities=11%  Similarity=0.131  Sum_probs=52.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY   80 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~   80 (197)
                      ++|.|+|.|.|..|  ...+.|.|..++..|.+......   ..|.|.....+. +    .+.|........  .  ...
T Consensus        71 DsG~Y~C~~~n~~~--~~~~~L~V~~~~~~p~i~~~~~~---~~L~C~~~~~p~-p----~i~W~~~~~~l~--~--~~~  136 (171)
T 1ccz_A           71 DEDEYEMESPNITD--TMKFFLYVLEMVSKPMIYWECSN---ATLTCEVLEGTD-V----ELKLYQGKEHLR--S--LRQ  136 (171)
T ss_dssp             GCEEEEEECTTCCS--CEEEEEEEECCCCCCEEEEETTT---TEEEEECSSCSS-C----EEEEEETTEEEE--E--ESS
T ss_pred             hCceEEEEEeCCCC--cEEEEEEEECcCCCCEEEEecCC---cEEEEEeCCCCC-c----EEEEEECCEECc--C--Ccc
Confidence            57999999999988  67788888888877875443222   367887643221 1    344543221111  1  111


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.+..  .+....|.|.|.|..|..
T Consensus       137 ~~l~~~~--~~~~g~Y~C~a~N~~~~~  161 (171)
T 1ccz_A          137 KTMSYQW--TNLRAPFKCKAVNRVSQE  161 (171)
T ss_dssp             SEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred             eEEEEec--cCCCceEEEEEEcccCcc
Confidence            2233322  344446778888888754

>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A

Probab=96.91  E-value=0.0061  Score=40.65  Aligned_cols=102  Identities=8%  Similarity=0.014  Sum_probs=61.8

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEE---eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe--
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQ---STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV--   76 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~---~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~--   76 (197)
                      .|.|.|.+.+.....+..+.+.+..+|..+.+...   ......++|.|....  ..|...+.|.|...+........  
T Consensus        60 ~g~y~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g--~~P~~~l~i~w~kg~~~l~~~~~~~  137 (185)
T 1iam_A           60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEG--GAPRAQLTVVLLRGEKELKREPAVG  137 (185)
T ss_dssp             CBCCEEEEECSSCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEEC--CBCGGGEEEEEEETTEEEEEEECCT
T ss_pred             CCEEEEEEECCCCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCC--ccCCCCcEEEEEeCCEEcccccCCC
Confidence            48999998666455777888888888877664433   456788999998854  44545566777644322211110  


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ......+++.--.....-.|.|+|.+..+
T Consensus       138 ~~~~~tl~~~~~reD~g~~~sC~A~~~l~  166 (185)
T 1iam_A          138 EPAEVTTTVLVRRDHHGAQFSCRTELDLR  166 (185)
T ss_dssp             TTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred             ccccEEEEEeceeccCCCeEEEEEEecCc
Confidence            01112344433333334477788888876

>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A

Probab=96.91  E-value=0.005  Score=42.85  Aligned_cols=103  Identities=10%  Similarity=-0.058  Sum_probs=57.4

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCC------------CCCCEEE-----EEeecCCeEEEEeeeCCCCCccccEEEE
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSP------------PGVPNIL-----LQSTTTHSISILWKPSYDGGAIITHYIV   62 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~------------P~~p~~~-----~~~~~~~~~~l~W~~~~~~~~~i~~y~v   62 (197)
                      ++|.|+|.|.|..+.. .....+.+...            +.+|.+.     .......++.|.|........ ...+.+
T Consensus        91 DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~~~v  169 (253)
T 3uzq_A           91 DTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR-YGNSFM  169 (253)
T ss_dssp             GCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE-TTEECE
T ss_pred             cCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc-CCCcEE
Confidence            4799999999976653 34556666642            1122211     233456788888887432211 001223


Q ss_pred             EEEe--CCCC-----------------cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          63 SYRD--RTED-----------------WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        63 ~~~~--~~~~-----------------~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .|..  ....                 ............++|.++.......|.|.+.|..
T Consensus       170 ~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~  230 (253)
T 3uzq_A          170 HWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEV  230 (253)
T ss_dssp             EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred             EEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence            3321  1111                 1111122334468999999999999999998864

>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}

Probab=96.89  E-value=0.014  Score=40.70  Aligned_cols=104  Identities=12%  Similarity=-0.046  Sum_probs=58.0

Q ss_pred             CCeeEEEEEEeC------------CCCceeEEEEEecCCCC------------CCE-E----EEEeecCCeEEEEeeeCC
Q psy9139           1 MVGNYTCLADNI------------FGKDDIYYQVTILSPPG------------VPN-I----LLQSTTTHSISILWKPSY   51 (197)
Q Consensus         1 ~~g~y~c~a~n~------------~G~~~~~~~~~~~~~P~------------~p~-~----~~~~~~~~~~~l~W~~~~   51 (197)
                      ++|.|.|.|.|.            .+.......+.+...+.            ++. .    ........++.|.|....
T Consensus        96 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~  175 (256)
T 3juy_B           96 DTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSH  175 (256)
T ss_dssp             GCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESS
T ss_pred             cCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECC
Confidence            479999999997            23333455677766543            222 1    122345678899988754


Q ss_pred             CCC-ccccEEEEE---------EEe-----CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          52 DGG-AIITHYIVS---------YRD-----RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        52 ~~~-~~i~~y~v~---------~~~-----~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ... ..+.||+-.         +..     ................++|.++.+.....|.|.+.|..
T Consensus       176 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~  243 (256)
T 3juy_B          176 SIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS  243 (256)
T ss_dssp             CCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred             CcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence            322 234444310         000     00011112223334568999999988889999888743

>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A

Probab=96.88  E-value=0.021  Score=39.14  Aligned_cols=104  Identities=6%  Similarity=-0.008  Sum_probs=54.5

Q ss_pred             CCeeEEEEEEeCCCCc-----eeEEEEEecCCCC---C------CE-----EEEEeecCCeEEEEeeeCCCCCccccEEE
Q psy9139           1 MVGNYTCLADNIFGKD-----DIYYQVTILSPPG---V------PN-----ILLQSTTTHSISILWKPSYDGGAIITHYI   61 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-----~~~~~~~~~~~P~---~------p~-----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~   61 (197)
                      ++|.|+|.|.|..|..     .....+.+...+.   +      +.     -.+.......+.|.|.....+...+.||+
T Consensus        84 DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k  163 (238)
T 2p1y_A           84 QTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQ  163 (238)
T ss_dssp             GCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEE
T ss_pred             cCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEE
Confidence            4799999999987631     1234556654432   0      01     11223456788888886433222244333


Q ss_pred             EE---------EEeCC-----CCcEEEE--eCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          62 VS---------YRDRT-----EDWQSVH--VDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        62 v~---------~~~~~-----~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      -.         +....     .....+.  .......+.|.++.......|.|.+.|..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~  222 (238)
T 2p1y_A          164 QFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN  222 (238)
T ss_dssp             ECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred             ECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence            10         00000     0011111  12234578999999999999999999873

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=96.86  E-value=0.0087  Score=46.26  Aligned_cols=103  Identities=12%  Similarity=0.026  Sum_probs=58.3

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec-CCCCCCEEEE-----EeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC----
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL-SPPGVPNILL-----QSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED----   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~-~~P~~p~~~~-----~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~----   70 (197)
                      +.|.|+|.|.|..|.....+.+.+. .++.+|.+..     .......+.|.|........+   ..+.|...+..    
T Consensus       189 d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p---~~v~W~k~g~~~~~~  265 (523)
T 2rcj_C          189 SHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQP---VTVSWNSGALTSGVH  265 (523)
T ss_pred             CCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCC---eEEEEecCCcccceE
Confidence            5799999999999976666554322 3344444221     113456788888763210112   13555422111    


Q ss_pred             -cEEEEeCCc----ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          71 -WQSVHVDAE----YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        71 -~~~~~~~~~----~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                       .........    ...+.|.++.... ..|.|.|.|..|..
T Consensus       266 ~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~  306 (523)
T 2rcj_C          266 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT  306 (523)
T ss_pred             eCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence             001111111    2367888888777 89999999988863

>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}

Probab=96.84  E-value=0.00043  Score=46.62  Aligned_cols=103  Identities=12%  Similarity=0.076  Sum_probs=54.5

Q ss_pred             CCeeEEEEEEeCCCCcee-EEEEEecCCCCCCEE---EEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE---
Q psy9139           1 MVGNYTCLADNIFGKDDI-YYQVTILSPPGVPNI---LLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS---   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~-~~~~~~~~~P~~p~~---~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~---   73 (197)
                      ++|.|.|.+.|..+.... ...+.+..++.....   .........+.+.+.....+..     .|.|.........   
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p-----~i~W~~~~~~~~~~~~  164 (218)
T 4frw_A           90 DEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP-----SVTWDTEVKGTTSSRS  164 (218)
T ss_dssp             GCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC-----EEEEEESSCCEEEEEE
T ss_pred             HCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc-----eEEEEECCcccccCce
Confidence            479999999988775443 333444433333221   1222334556666654221111     2444422221111   


Q ss_pred             EEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          74 VHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        74 ~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....   ....+.|..+.......|.|.|.|..|...
T Consensus       165 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~  202 (218)
T 4frw_A          165 FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQD  202 (218)
T ss_dssp             EECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred             EecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeE
Confidence            11111   123578888877777889999999887654

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=96.84  E-value=0.0025  Score=43.62  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=30.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCC----CCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAG----STNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G----~~~~~~~~~t~~~~  177 (197)
                      ...+.|.+|+|++.|.|+|||....|    +|+.+..+...+..
T Consensus       164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~  207 (214)
T 2b5i_B          164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP  207 (214)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred             ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCC
Confidence            45789999999999999999997644    36666655555544

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=96.84  E-value=0.0013  Score=48.50  Aligned_cols=31  Identities=10%  Similarity=0.017  Sum_probs=24.9

Q ss_pred             CCeeEEEEEEeC--CCCceeEEEEEecCCCCCC
Q psy9139           1 MVGNYTCLADNI--FGKDDIYYQVTILSPPGVP   31 (197)
Q Consensus         1 ~~g~y~c~a~n~--~G~~~~~~~~~~~~~P~~p   31 (197)
                      ++|.|+|.|.|.  .|.....+.+.+...++.+
T Consensus       266 d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~  298 (363)
T 1wio_A          266 YAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQ  298 (363)
T ss_dssp             GCEEEEEEECBTTTTCCEEEEEEEEEEEECCCS
T ss_pred             cCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCC
Confidence            579999999999  9988888888877544433

>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1

Probab=96.81  E-value=0.0087  Score=41.77  Aligned_cols=101  Identities=19%  Similarity=0.075  Sum_probs=57.0

Q ss_pred             CCeeEEEEEEeCCCC---------ceeEEEEEecCCCC------------CCEE-----EEEeecCCeEEEEeeeCCCCC
Q psy9139           1 MVGNYTCLADNIFGK---------DDIYYQVTILSPPG------------VPNI-----LLQSTTTHSISILWKPSYDGG   54 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~---------~~~~~~~~~~~~P~------------~p~~-----~~~~~~~~~~~l~W~~~~~~~   54 (197)
                      ++|.|+|.|.|..|.         ....+.+.|...|.            ++.+     .+.......+.|.|.....+.
T Consensus        89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~  168 (257)
T 1f3r_B           89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN  168 (257)
T ss_dssp             CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred             cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence            579999999998651         11344667766541            1111     122234678899998643222


Q ss_pred             ccccEEEEEEEeCCC-----------------CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          55 AIITHYIVSYRDRTE-----------------DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        55 ~~i~~y~v~~~~~~~-----------------~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ..+.||+-   ....                 .............++|.++.......|.|.+.|..
T Consensus       169 ~~v~W~k~---~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~  232 (257)
T 1f3r_B          169 NYLAWYQQ---KLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG  232 (257)
T ss_dssp             TCEEEEEE---CTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred             CcEEEEEE---CCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence            22444331   0111                 11111112234468999999988889999998864

>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*

Probab=96.80  E-value=0.0012  Score=44.55  Aligned_cols=50  Identities=18%  Similarity=0.214  Sum_probs=34.5

Q ss_pred             CCeeEEEEEEeCCC---CceeEEEEEecCCC-CCCEEEEEee-----cCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFG---KDDIYYQVTILSPP-GVPNILLQST-----TTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G---~~~~~~~~~~~~~P-~~p~~~~~~~-----~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|   .....+.+.+...| .+|.+.....     ....+.|.|...
T Consensus        81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~  139 (213)
T 3mj8_L           81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMIN  139 (213)
T ss_dssp             GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred             hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEee
Confidence            47999999999998   34556677777555 5666443321     367788888763

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=96.79  E-value=0.0051  Score=44.45  Aligned_cols=50  Identities=18%  Similarity=0.316  Sum_probs=34.7

Q ss_pred             CCeeEEEEEEeCCCCc-----eeEEEEEecCCCCCCEEE---EEeecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKD-----DIYYQVTILSPPGVPNIL---LQSTTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-----~~~~~~~~~~~P~~p~~~---~~~~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|..     ...+.+.+..+|.+|.+.   ........+.|.|...
T Consensus        85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~  142 (327)
T 2wng_A           85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESH  142 (327)
T ss_dssp             GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEE
T ss_pred             cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEe
Confidence            4799999999987742     234678888888887643   1123456788888763

>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=96.79  E-value=0.0027  Score=35.40  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=27.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ..+|+|.||+||..|+.++.+.-..|.++..
T Consensus        37 ~nSYtIsGLkPGvtYegQLisV~r~g~~Evt   67 (89)
T 1q38_A           37 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVT   67 (89)
T ss_dssp             SSCCCCCCCCTTCCEEEEEEEECTTSCCCEE
T ss_pred             cceEEEeccCCCcEEEEEEEeeeecccCCce
Confidence            4579999999999999999999998888753

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=96.78  E-value=0.0024  Score=46.35  Aligned_cols=110  Identities=11%  Similarity=0.106  Sum_probs=61.3

Q ss_pred             CCeeEEEEEEeCCCC----ceeEEEEEecCCC--CCCEEEE-----EeecCCeEEEEeeeCCCCCcc-ccEEEEEEEeCC
Q psy9139           1 MVGNYTCLADNIFGK----DDIYYQVTILSPP--GVPNILL-----QSTTTHSISILWKPSYDGGAI-ITHYIVSYRDRT   68 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~----~~~~~~~~~~~~P--~~p~~~~-----~~~~~~~~~l~W~~~~~~~~~-i~~y~v~~~~~~   68 (197)
                      +.|.|+|.|.|..|.    ....+.+.+...+  .+|.+..     .......+.|.|....+.+.| ..  .+.|....
T Consensus       191 d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~--~v~W~~~g  268 (339)
T 3o4o_C          191 DAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTT--MLWWTAND  268 (339)
T ss_dssp             GCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSC--EEEEESSS
T ss_pred             hCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCc--eEEEEECC
Confidence            479999999999884    4556677776544  2443211     112345667777652101111 11  34454211


Q ss_pred             C---------CcEE---EEeCCcc-----cEEEECCCCCCCE-EEEEEEEEcCCcCCCCCCc
Q psy9139          69 E---------DWQS---VHVDAEY-----REFTLTQLKCGTH-YKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        69 ~---------~~~~---~~~~~~~-----~~~~i~~L~p~~~-y~~~v~a~~~~g~~~~s~~  112 (197)
                      .         ....   .......     ..+.|.++..... ..|.|.|.|..|.......
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~  330 (339)
T 3o4o_C          269 THIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTT  330 (339)
T ss_dssp             SCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCC
T ss_pred             eecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEE
Confidence            1         0110   0111111     1578888888886 8899999999997655443

>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A

Probab=96.75  E-value=0.0077  Score=41.95  Aligned_cols=100  Identities=9%  Similarity=-0.012  Sum_probs=54.9

Q ss_pred             CCeeEEEEEEeCCCC----ceeEEEEEecCCC-----------CCCEE-----EEEeecCCeEEEEeeeCCCCCc-cccE
Q psy9139           1 MVGNYTCLADNIFGK----DDIYYQVTILSPP-----------GVPNI-----LLQSTTTHSISILWKPSYDGGA-IITH   59 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~----~~~~~~~~~~~~P-----------~~p~~-----~~~~~~~~~~~l~W~~~~~~~~-~i~~   59 (197)
                      ++|.|+|.|.|..+.    ....+.+.+..++           .++.+     ........++.|.|........ .+.|
T Consensus        97 DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W  176 (257)
T 3gkz_A           97 DTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYW  176 (257)
T ss_dssp             GCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEE
T ss_pred             hCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEE
Confidence            479999999997332    2234456666541           11211     1233456788898887543222 3444


Q ss_pred             EEEEEEeCCCC-----------------cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          60 YIVSYRDRTED-----------------WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        60 y~v~~~~~~~~-----------------~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      |+-   .....                 ............++|.++.......|.|.+.+.
T Consensus       177 ~k~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~  234 (257)
T 3gkz_A          177 YQQ---KPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSS  234 (257)
T ss_dssp             EEE---CTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred             EEE---CCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccC
Confidence            431   11111                 111111223446899999999999999988764

>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}

Probab=96.71  E-value=0.0078  Score=39.75  Aligned_cols=92  Identities=10%  Similarity=0.060  Sum_probs=54.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcc
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY   80 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~   80 (197)
                      ++|.|+|.+.+.. .....+.|.|..++..|.+...   ...+.|.|.....   +..  .+.|........  .  ...
T Consensus        80 D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~~---~~~v~L~C~~~~g---p~p--~i~W~~~~~~l~--~--~~~  146 (180)
T 2dru_A           80 DRGDYYMRMLHET-EDQWKITMEVYEMVSKPMIYWE---CSNATLTCEVLEG---TDV--ELKLYQGKEHLR--S--LRQ  146 (180)
T ss_dssp             GCEEEEEEEESSS-EEEEEEEEEEECCCCCCEEEEE---GGGTEEEEECSSC---TTC--EEEEEETTEEEE--E--ESS
T ss_pred             HCeEEEEEEEcCC-eEEEEEEEEEECCCCCCEEEec---CCCEEEEEEeCCC---CCC--EEEEEECCeECc--C--CCC
Confidence            4799999998876 5667788888888877875443   2458899987432   211  244543322111  1  112


Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.+..  ......|.|.|.|..|..
T Consensus       147 ~~l~~~~--~~d~g~Y~C~a~N~~~~~  171 (180)
T 2dru_A          147 KTMSYQW--TNLRAPFKCKAVNRVSQE  171 (180)
T ss_dssp             SEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred             CEEEEEE--hhcCccEEEEEecCcCcc
Confidence            2344422  334456778888887653

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=96.70  E-value=0.012  Score=44.25  Aligned_cols=102  Identities=10%  Similarity=-0.037  Sum_probs=54.9

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEE----EEEeecCCeEEEEeeeCCCC--CccccEEEEE------EE---
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNI----LLQSTTTHSISILWKPSYDG--GAIITHYIVS------YR---   65 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~----~~~~~~~~~~~l~W~~~~~~--~~~i~~y~v~------~~---   65 (197)
                      ++|.|+|.|.|..|.......+...  +..+.+    .........+.|.|.....+  ...+.||+-.      +.   
T Consensus       192 d~G~Y~C~a~n~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~  269 (438)
T 1qgc_4          192 RHNSYTCEATHKTSTSPIVKSFNRN--ECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATI  269 (438)
T ss_dssp             TCCEEEEEEEETTCSSCEEEEEETT--C-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEE
T ss_pred             CCCeEEEEEEecccCCceecccccc--cceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEE
Confidence            5799999999999875433333221  111111    11223456778888763222  1224443320      00   


Q ss_pred             e-----------CCCCcEEEEeC--CcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          66 D-----------RTEDWQSVHVD--AEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        66 ~-----------~~~~~~~~~~~--~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .           ..+. ..+...  .....+.|.++.......|.|.+.|..|
T Consensus       270 ~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~  321 (438)
T 1qgc_4          270 SSGGTYTYYPDSVKGR-FTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGG  321 (438)
T ss_dssp             CTTSCCEECCGGGTTT-EEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSS
T ss_pred             eecCCceecCcccCCc-EEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCC
Confidence            0           0111 111111  2234789999999999999999998544

>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...

Probab=96.68  E-value=0.0033  Score=42.36  Aligned_cols=102  Identities=14%  Similarity=0.075  Sum_probs=56.2

Q ss_pred             CCeeEEEEEEeCCCCce-eEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeeeCC-CCCccccEEEEEEEeCCC----
Q psy9139           1 MVGNYTCLADNIFGKDD-IYYQVTILSPPGVPNILLQS-----TTTHSISILWKPSY-DGGAIITHYIVSYRDRTE----   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~-~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~----   69 (197)
                      ++|.|+|.|.|..|... ..+.+.+...+.+|.+.+..     .....+.|.|.... .+. +   ..+.|...+.    
T Consensus        82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~-~---~~v~W~k~g~~~~~  157 (213)
T 3d9a_L           82 DFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK-D---INVKWKIDGSERQN  157 (213)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS-C---CEEEEEETTEEECT
T ss_pred             hCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCC-c---eEEEEEcCCCcCcc
Confidence            47999999999988533 34567777766677644322     23457888887632 111 1   1244432111    


Q ss_pred             C-cEEEEe--CCc-----ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          70 D-WQSVHV--DAE-----YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        70 ~-~~~~~~--~~~-----~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      . ......  ..+     ...+.|.++.......|.|.|.|....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~  202 (213)
T 3d9a_L          158 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST  202 (213)
T ss_dssp             TEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred             eeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence            1 010000  111     125677776655556778888886643

>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}

Probab=96.67  E-value=0.0065  Score=42.18  Aligned_cols=102  Identities=14%  Similarity=0.059  Sum_probs=38.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE--EEEEeecCCeEEEEeeeCCCC-----CccccEEEEE---------E
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN--ILLQSTTTHSISILWKPSYDG-----GAIITHYIVS---------Y   64 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~--~~~~~~~~~~~~l~W~~~~~~-----~~~i~~y~v~---------~   64 (197)
                      ++|.|+|.|.   |.......+.+..+|....  ..+.......+.|.|.....+     ...+.||+-.         +
T Consensus        15 dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~   91 (254)
T 2c1o_A           15 TSVKLSCKAS---GYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIY   91 (254)
T ss_dssp             --------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEE
T ss_pred             ccEEEEEcCc---hhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEE
Confidence            5799999998   5444444333332221110  112334567788888764322     1223333210         0


Q ss_pred             ----Ee-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          65 ----RD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        65 ----~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                          .. ................+.|.++.......|.|.+.|..+
T Consensus        92 ~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~  137 (254)
T 2c1o_A           92 LVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFP  137 (254)
T ss_dssp             TTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred             eccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcc
Confidence                00 000111112223344789999999888899999988754

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=96.63  E-value=0.013  Score=42.27  Aligned_cols=103  Identities=4%  Similarity=-0.008  Sum_probs=48.5

Q ss_pred             CeeEEEEEEeCCCCc-eeEEEEEec-CCCCCCEEEEEe---ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEE---
Q psy9139           2 VGNYTCLADNIFGKD-DIYYQVTIL-SPPGVPNILLQS---TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS---   73 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~-~~~~~~~~~-~~P~~p~~~~~~---~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~---   73 (197)
                      .|.|+|.|.|..|.. .......+. ....+|.+....   .....+.|.|........+   ..+.|...+.....   
T Consensus       192 ~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~---~~v~W~k~g~~l~~~~~  268 (327)
T 2wng_A          192 HSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQR---LQLTWLENGNVSRTETA  268 (327)
T ss_dssp             GCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSC---EEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCC---cEEEEEECCeEccCccc
Confidence            599999999998863 222222221 234455532221   2456778888763211111   23444422111100   


Q ss_pred             --EEeCCcc-----cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          74 --VHVDAEY-----REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        74 --~~~~~~~-----~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                        .....+.     ..+.|..........|.|.|.|..|..
T Consensus       269 ~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~  309 (327)
T 2wng_A          269 STVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA  309 (327)
T ss_dssp             CSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred             CceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence              0111111     235666666667778899999988643

>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L

Probab=96.62  E-value=0.047  Score=38.46  Aligned_cols=104  Identities=10%  Similarity=-0.018  Sum_probs=54.9

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCC----------CCE--EE----EEeecCCeEEEEeeeCCCC--CccccEEE
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPG----------VPN--IL----LQSTTTHSISILWKPSYDG--GAIITHYI   61 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~----------~p~--~~----~~~~~~~~~~l~W~~~~~~--~~~i~~y~   61 (197)
                      ++|.|+|.|.|..+. ....+.+.|...|.          +|.  +.    ........+.|.|......  ...+.||+
T Consensus        93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k  172 (276)
T 3auv_A           93 DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVR  172 (276)
T ss_dssp             GCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEE
T ss_pred             hCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEE
Confidence            479999999998664 33345666665542          222  11    1223467788888763211  12234433


Q ss_pred             EE------EE---e----------CCCCcEEEEeC--CcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          62 VS------YR---D----------RTEDWQSVHVD--AEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        62 v~------~~---~----------~~~~~~~~~~~--~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      -.      +.   .          .......+...  .....+.|.++.......|.|.+.|..
T Consensus       173 ~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~  236 (276)
T 3auv_A          173 QAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF  236 (276)
T ss_dssp             ECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred             cCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence            10      00   0          00011111111  223478999999999999999999974

>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}

Probab=96.61  E-value=0.0021  Score=39.66  Aligned_cols=30  Identities=20%  Similarity=0.169  Sum_probs=23.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVP   31 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p   31 (197)
                      ++|.|+|.|.|. |.....+.+.|..+|..+
T Consensus        77 DsG~Y~C~a~n~-g~~~~~~~l~V~~~P~~~  106 (124)
T 3rbg_A           77 DEGVYKCLHYSD-SVSTKEVKVIVLATMKGE  106 (124)
T ss_dssp             GCEEEEEEEESS-SEEEEEEEEEEECC----
T ss_pred             HCEEEEEEEEcC-CCCcEEEEEEEEeCCCCC
Confidence            479999999999 988899999999888665

>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*

Probab=96.59  E-value=0.0018  Score=44.18  Aligned_cols=49  Identities=8%  Similarity=0.007  Sum_probs=35.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEE-EeecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILL-QSTTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~-~~~~~~~~~l~W~~~   50 (197)
                      +.|.|.|.|.|..|.....+.+.|..+|..+.+.. .-...... |.|...
T Consensus        70 d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~  119 (210)
T 1gsm_A           70 AAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPAALVPGDPE-VACTAH  119 (210)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEESSSBCTTCCE-EEEEEE
T ss_pred             cCceEEEEEEeCCCceEEEEEEEEEecCCCcEEccceEEeCCce-EEEEeC
Confidence            36999999999999888899999999987765331 11223445 777664

>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...

Probab=96.58  E-value=0.0049  Score=41.67  Aligned_cols=49  Identities=10%  Similarity=0.017  Sum_probs=33.4

Q ss_pred             CCeeEEEEEEeCCC--CceeEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFG--KDDIYYQVTILSPPGVPNILLQS-----TTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G--~~~~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~   49 (197)
                      ++|.|+|.|.|..|  .......+.+...+.+|.+....     .....+.|.|..
T Consensus        83 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~  138 (216)
T 2xzc_L           83 DEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLL  138 (216)
T ss_dssp             GCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEE
T ss_pred             cCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEE
Confidence            47999999999987  22334567777666777744422     235678888876

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=96.54  E-value=0.0036  Score=43.82  Aligned_cols=96  Identities=7%  Similarity=-0.038  Sum_probs=53.3

Q ss_pred             CCeeEEEEEEeC-CCCce---eEEEEEecCCCCCCE----EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE
Q psy9139           1 MVGNYTCLADNI-FGKDD---IYYQVTILSPPGVPN----ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ   72 (197)
Q Consensus         1 ~~g~y~c~a~n~-~G~~~---~~~~~~~~~~P~~p~----~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~   72 (197)
                      +.|.|+|.|.|. .|...   ..+.+.+..+|....    -.........+.|.|....  . |..  .+.|.....   
T Consensus       153 ~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g--~-P~p--~i~W~~~~~---  224 (265)
T 2oz4_A          153 NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWG--N-PLP--ELKCLKDGT---  224 (265)
T ss_dssp             TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEE--E-SCC--EEEEEETTT---
T ss_pred             CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECcc--C-CCC--eEEEEECCc---
Confidence            467899999854 47655   566777776654321    0122234667777776421  1 111  355553332   


Q ss_pred             EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          73 SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        73 ~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      . ..... ...   .+.......|.|.|.|..|....
T Consensus       225 ~-~~~~g-~~~---~v~~~d~G~Y~C~a~N~~G~~~~  256 (265)
T 2oz4_A          225 F-PLPIG-ESV---TVTRDLEGTYLCRARSTQGEVTR  256 (265)
T ss_dssp             E-ECCTT-SCE---ECCGGGCEEEEEEEEETTEEEEE
T ss_pred             c-cCCCC-cEE---EeehhhCeEEEEEEECCCCcEEE
Confidence            1 11111 111   25556778899999998876543

>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}

Probab=96.54  E-value=0.02  Score=39.71  Aligned_cols=25  Identities=4%  Similarity=-0.095  Sum_probs=21.1

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ...++|.++.+.....|.|.+.|..
T Consensus       212 ~~~L~I~~v~~~DsG~Y~C~~~~~~  236 (256)
T 3ux9_B          212 TLYLQMNSLRAEDTAVYYCARYIDF  236 (256)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEEETT
T ss_pred             EEEEEECCCChhhCEEEEEEEEcCC
Confidence            4458999999999999999999853

>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1

Probab=96.50  E-value=0.042  Score=37.61  Aligned_cols=102  Identities=11%  Similarity=-0.068  Sum_probs=57.2

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCC--CCE--EE----EEeecCCeEEEEeeeCCCCC--ccccEEEEE------
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPG--VPN--IL----LQSTTTHSISILWKPSYDGG--AIITHYIVS------   63 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~--~p~--~~----~~~~~~~~~~l~W~~~~~~~--~~i~~y~v~------   63 (197)
                      ++|.|+|.|.|..|. ....+.+.+..++.  +|.  +.    ........+.|.|.....+.  ..+.||+-.      
T Consensus        86 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~  165 (240)
T 1moe_A           86 DVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLE  165 (240)
T ss_dssp             GCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCE
T ss_pred             hCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcE
Confidence            479999999998775 44456677766542  121  11    12234677888887643211  124443310      


Q ss_pred             ---EEe-----------CCCCcEEEEe--CCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          64 ---YRD-----------RTEDWQSVHV--DAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        64 ---~~~-----------~~~~~~~~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                         +..           ..+. ..+..  ......+.|.++.......|.|.+...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~  220 (240)
T 1moe_A          166 WIGRIDPANGNSKYVPKFQGK-ATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY  220 (240)
T ss_dssp             EEEEEETTTTEEEECGGGTTT-EEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred             EEEEEcccCCccccCcccccc-EEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence               000           0011 11111  123456899999999999999998854

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=96.49  E-value=0.14  Score=37.09  Aligned_cols=77  Identities=12%  Similarity=0.065  Sum_probs=47.0

Q ss_pred             CCCCE-EEEEeec-----------CCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE---eCC--cccEEEECCCC-
Q psy9139          28 PGVPN-ILLQSTT-----------THSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH---VDA--EYREFTLTQLK-   89 (197)
Q Consensus        28 P~~p~-~~~~~~~-----------~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~---~~~--~~~~~~i~~L~-   89 (197)
                      |..|. +.+....           ...+...|.++.+...+ +.|.+.|+... .+..+.   ...  ....+.+.... 
T Consensus       108 ~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~~~~-t~Y~L~y~~~~-~~~eC~~y~~~~~~~~~~C~f~~~~~  185 (317)
T 3qt2_A          108 GTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDAPED-TQYFLYYRYGS-WTEECQEYSMDTLGRNIACWFPRTFI  185 (317)
T ss_dssp             GGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTCCTT-CEEEEEEEETT-EEEECCCEEECTTSCEEEEEESSCSC
T ss_pred             CCcceeeEEEEccccccccccccccceEEEEeeCCCCCCCC-eeEEEEEEeCC-CCeeCCccccCCCcceeEEEeCCccc
Confidence            34555 6666555           47899999997654433 56889887543 233331   122  23467776543 


Q ss_pred             ---CCCEEEEEEEEEcCCcC
Q psy9139          90 ---CGTHYKINIKLVNSIGE  106 (197)
Q Consensus        90 ---p~~~y~~~v~a~~~~g~  106 (197)
                         ....|.|.|.+.+..+.
T Consensus       186 ~~~~~~~~~i~V~gss~~~~  205 (317)
T 3qt2_A          186 LSKGRDWLAVLVNGSSKHSA  205 (317)
T ss_dssp             CTTCCSEEEEEEEEECTTSC
T ss_pred             cccCcEEEEEEEEcCCCCcc
Confidence               35688899887765443

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*

Probab=96.43  E-value=0.0058  Score=42.02  Aligned_cols=39  Identities=18%  Similarity=0.163  Sum_probs=28.7

Q ss_pred             eEEEcCCCCCCeEEEEEEEEcC----CCCCCcceEEEEeeeCC
Q psy9139         140 PLVIENLLPATRYELTISAKND----AGSTNKNYVFATLSVNG  178 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~----~G~~~~~~~~~t~~~~~  178 (197)
                      .+.+.+|+|++.|.|+|||...    .++|+.+..+...+.+.
T Consensus       173 ~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~  215 (223)
T 3up1_A          173 TLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI  215 (223)
T ss_dssp             EEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred             EEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence            3555799999999999999975    24667676665665443

>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*

Probab=96.39  E-value=0.0062  Score=40.96  Aligned_cols=28  Identities=11%  Similarity=0.128  Sum_probs=21.3

Q ss_pred             EEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          82 EFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        82 ~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .+.|..........|.|.|.|..|....
T Consensus       182 ~L~i~~~~~~d~g~YtC~a~N~~~~~~~  209 (225)
T 4fmk_A          182 RYSLVPVGRADGVKVTCRVEHESFEEPI  209 (225)
T ss_dssp             EEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred             EEEEeeCCHHHCCEEEEEEEcCCCCeEE
Confidence            5778887777777888999998876543

>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A

Probab=96.38  E-value=0.039  Score=38.04  Aligned_cols=103  Identities=10%  Similarity=0.038  Sum_probs=55.4

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCC----------CC-EEE----EEeecCCeEEEEeeeCCCC--CccccEEEE
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPG----------VP-NIL----LQSTTTHSISILWKPSYDG--GAIITHYIV   62 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~----------~p-~~~----~~~~~~~~~~l~W~~~~~~--~~~i~~y~v   62 (197)
                      ++|.|.|.|.|..+. ....+.+.+..++.          ++ .+.    .......++.|.|......  ...+.||+-
T Consensus        87 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~  166 (247)
T 1svz_A           87 DLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ  166 (247)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred             HCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence            479999999998664 22345667766542          22 111    1234567788888874321  122444431


Q ss_pred             E---------EEeCC----------CCcEEEEe--CCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          63 S---------YRDRT----------EDWQSVHV--DAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        63 ~---------~~~~~----------~~~~~~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .         +....          ........  ......+.|.++.......|.|.+.|.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~  228 (247)
T 1svz_A          167 APGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH  228 (247)
T ss_dssp             CTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred             CCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence            0         00000          01111111  122347899999999999999999885

>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*

Probab=96.28  E-value=0.0037  Score=42.08  Aligned_cols=50  Identities=10%  Similarity=0.003  Sum_probs=33.5

Q ss_pred             CCeeEEEEEEeCCCCce-eEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKDD-IYYQVTILSPPGVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~-~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|... ....+.+...+.+|.+.+..     .....+.|.|...
T Consensus        81 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~  136 (210)
T 1lk3_L           81 DTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMN  136 (210)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred             HCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEE
Confidence            47999999999887532 34467777666667644322     2356788888763

>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}

Probab=96.26  E-value=0.039  Score=37.07  Aligned_cols=101  Identities=3%  Similarity=-0.041  Sum_probs=61.2

Q ss_pred             eeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEE---eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCC-
Q psy9139           3 GNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQ---STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDA-   78 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~---~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~-   78 (197)
                      +.|.|.+.......+..+.+.+..+|..+.+...   ......++|.|..+.  ..|...+.|.|...+.......... 
T Consensus        64 ~~~~C~~~c~~~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~--~~P~~~L~i~wlkg~~~l~~~~~~~~  141 (196)
T 3bn3_B           64 TQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPG--AGPRASLTLTLLRGAQELIRRSFAGE  141 (196)
T ss_dssp             ECCEEEEEETTEEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETT--CBCGGGEEEEEEETTEEEEEEECTTS
T ss_pred             CceEEEEECCCCceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCC--ccCCCCcEEEEEeCCEEeeccccccc
Confidence            4599997765556778889999999988875444   456788999999865  4455556677764432222111111 


Q ss_pred             ------cccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          79 ------EYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        79 ------~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                            ....+++.--.....-.|.|+|.+..+
T Consensus       142 ~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~  174 (196)
T 3bn3_B          142 PPRARGAVLTATVLARREDHGANFSCRAELDLR  174 (196)
T ss_dssp             CTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred             cccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence                  012344433223333467788887776

>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...

Probab=96.22  E-value=0.016  Score=39.28  Aligned_cols=103  Identities=10%  Similarity=-0.000  Sum_probs=53.4

Q ss_pred             CCeeEEEEEEeCCC-----CceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC
Q psy9139           1 MVGNYTCLADNIFG-----KDDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTE   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~   69 (197)
                      ++|.|.|.+.|..|     .....+.+.+.. ++.+|.+....     .....+.|.|........+   ..+.|.....
T Consensus        92 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p---~~v~W~~~g~  168 (222)
T 1q9r_B           92 DSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP---VTVTWNSGSL  168 (222)
T ss_dssp             GCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSC---CEEEEGGGTB
T ss_pred             cCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCC---CEEEEecCCe
Confidence            47999999999775     222345666664 34556533322     2356788888763210111   1355542211


Q ss_pred             C-----cEEEEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          70 D-----WQSVHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        70 ~-----~~~~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .     ........   ....+.|....... ..|.|.+.|..|..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~  213 (222)
T 1q9r_B          169 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST  213 (222)
T ss_dssp             CTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred             EcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCC
Confidence            1     00111111   01245666666444 67778888877643

>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}

Probab=96.19  E-value=0.022  Score=39.47  Aligned_cols=103  Identities=13%  Similarity=0.100  Sum_probs=54.6

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC----C
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTE----D   70 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~----~   70 (197)
                      ++|.|+|.|.|..+.. .....+.+...+.+|.+....     .....+.|.|........+   ..+.|...+.    .
T Consensus       124 D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~---~~v~W~k~g~~l~~~  200 (254)
T 2c1o_A          124 DLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKD---INVKWKIDGSERQNG  200 (254)
T ss_dssp             GCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSC---CEEEEEESSSEECTT
T ss_pred             cCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCC---cEEEEEECCCcccCc
Confidence            4799999999987643 223456676666667644322     1245788888763211111   1244432111    0


Q ss_pred             -cEEEEe--CCc-----ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          71 -WQSVHV--DAE-----YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        71 -~~~~~~--~~~-----~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                       ......  ..+     ...+.|..........|.|.|.|....
T Consensus       201 ~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~  244 (254)
T 2c1o_A          201 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST  244 (254)
T ss_dssp             EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred             ceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence             000000  111     234667666655556778888887643

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=96.15  E-value=0.0093  Score=44.87  Aligned_cols=102  Identities=13%  Similarity=0.089  Sum_probs=55.5

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeeeCC-CCCccccEEEEEEEeCC----C
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPNILLQS-----TTTHSISILWKPSY-DGGAIITHYIVSYRDRT----E   69 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~----~   69 (197)
                      ++|.|+|.|.|..|.. ...+.+.+..+..+|.+....     .....+.|.|.... .+ .+   ..+.|....    .
T Consensus        86 D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p-~~---~~v~W~k~g~~~~~  161 (438)
T 1qgc_4           86 DVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP-KD---INVKWKIDGSERQN  161 (438)
T ss_dssp             GCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS-SC---EEEEEEETTEEECT
T ss_pred             CCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccC-CC---cEEEEEECCEEcCC
Confidence            4799999999998843 445667776655567644322     22457888887532 11 11   234444211    0


Q ss_pred             C-cEEEEe--CCc-----ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          70 D-WQSVHV--DAE-----YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        70 ~-~~~~~~--~~~-----~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      . ......  ..+     ...+.|..+.......|.|.+.|..|.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~  206 (438)
T 1qgc_4          162 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST  206 (438)
T ss_dssp             TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred             CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccC
Confidence            1 000010  111     124666666655556777888887665

>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...

Probab=96.08  E-value=0.014  Score=39.21  Aligned_cols=101  Identities=9%  Similarity=-0.035  Sum_probs=50.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec-CCCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-EE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL-SPPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-QS   73 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~-~~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-~~   73 (197)
                      ++|.|+|.|.|.. .......+.+. ..+.+|.+....     .....+.|.|........++   .+.|....... ..
T Consensus        89 D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~---~v~W~~~~~~~~~~  164 (210)
T 3d9a_H           89 DTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPV---TVTWNSGSLSSGVH  164 (210)
T ss_dssp             GCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCC---EEEEGGGTBCTTEE
T ss_pred             cCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCc---EEEEeeCCcccceE
Confidence            4799999999864 22233556665 345666643332     23567888887632101111   35554221110 00


Q ss_pred             ----EEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          74 ----VHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        74 ----~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                          .....   ....+.|....... ..|.|.+.|..|.
T Consensus       165 ~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~  203 (210)
T 3d9a_H          165 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS  203 (210)
T ss_dssp             ECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGT
T ss_pred             EcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence                00011   12235555544333 5677888887764

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=95.94  E-value=0.0028  Score=38.43  Aligned_cols=86  Identities=24%  Similarity=0.395  Sum_probs=52.7

Q ss_pred             EecCCCCCCE-EEEEe-ecCCeEEEEeeeCC-C-----CCccccEEEEEEEeCCCCcEEEEe-C--CcccEEEECCCCCC
Q psy9139          23 TILSPPGVPN-ILLQS-TTTHSISILWKPSY-D-----GGAIITHYIVSYRDRTEDWQSVHV-D--AEYREFTLTQLKCG   91 (197)
Q Consensus        23 ~~~~~P~~p~-~~~~~-~~~~~~~l~W~~~~-~-----~~~~i~~y~v~~~~~~~~~~~~~~-~--~~~~~~~i~~L~p~   91 (197)
                      ....+|++|. +++.. .....+.++|.++. +     .+..+++|.|+-.   +. +...+ .  .+..-+.+..|...
T Consensus        13 l~aGpPdpP~dVqVe~Gp~pgtLlVsW~Pvt~~~~g~Snga~VtGY~VYad---Gq-kV~eV~~PTad~~lv~l~~L~~l   88 (130)
T 2csp_A           13 LPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAK---GQ-RVAEVIFPTADSTAVELVRLRSL   88 (130)
T ss_dssp             CCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESS---SS-EEEEECCTTCSEEEEESHHHHHH
T ss_pred             CCCCCCCCCceeEEEeCCCCcEEEEEeECCcccCCCCCCCcceEEEEEEeC---Cc-EEEEecCCCCCcEEEEHHHhcCC
Confidence            3347899997 66554 45678999999964 2     2356999998753   11 22222 1  23333444444444


Q ss_pred             CEEEEEEEEEcCCcCCCCCCc
Q psy9139          92 THYKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        92 ~~y~~~v~a~~~~g~~~~s~~  112 (197)
                      ..+.+.|+.....|.+..|..
T Consensus        89 ~~~~VtVRT~S~~GeS~DS~~  109 (130)
T 2csp_A           89 EAKGVTVRTLSAQGESVDSAV  109 (130)
T ss_dssp             TCSCBEEEEEESSCCCCCCSC
T ss_pred             CCcEEEEEeccCCccccCCcc
Confidence            456778888888888766543

>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H

Probab=95.87  E-value=0.19  Score=34.01  Aligned_cols=50  Identities=12%  Similarity=0.139  Sum_probs=31.3

Q ss_pred             CCeeEEEEEEeCCC------CceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFG------KDDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G------~~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|.|.+.|..|      .....+.|.|.. ++.+|.+....     .....+.|.|...
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~  151 (223)
T 1dee_B           90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQ  151 (223)
T ss_dssp             GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEE
T ss_pred             HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEE
Confidence            47999999999764      111334677763 55667643322     2346788888763

>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*

Probab=95.85  E-value=0.25  Score=33.87  Aligned_cols=104  Identities=11%  Similarity=0.037  Sum_probs=54.8

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCC----------CC-EEE----EEeecCCeEEEEeeeCCCC--CccccEEEE
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPG----------VP-NIL----LQSTTTHSISILWKPSYDG--GAIITHYIV   62 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~----------~p-~~~----~~~~~~~~~~l~W~~~~~~--~~~i~~y~v   62 (197)
                      ++|.|.|.|.|..+. ......+.|..+|.          ++ .+.    .......++.|.|......  ...+.||+-
T Consensus        82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~  161 (242)
T 2znx_A           82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK  161 (242)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred             HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence            479999999998653 22345677766653          11 111    1123456788888764221  112344331


Q ss_pred             ------EE---EeCC---------CCcEEEEe--CCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          63 ------SY---RDRT---------EDWQSVHV--DAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        63 ------~~---~~~~---------~~~~~~~~--~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                            ++   ....         .....+..  ......++|.++.......|.|.+.|..
T Consensus       162 ~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~  223 (242)
T 2znx_A          162 FPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGD  223 (242)
T ss_dssp             CTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSS
T ss_pred             CCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCc
Confidence                  00   0000         01111111  1233478999999999999999998743

>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*

Probab=95.84  E-value=0.034  Score=37.60  Aligned_cols=102  Identities=13%  Similarity=0.054  Sum_probs=52.6

Q ss_pred             CCeeEEEEEEeCCCCc---eeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGKD---DIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~---~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|.|.+.|..|..   ...+.+.+.. ++.+|.+....     .....+.|.|........++   .+.|.......
T Consensus        92 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~---~v~W~~~~~~~  168 (220)
T 1pz5_B           92 DTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPV---TVKWNYGALSS  168 (220)
T ss_dssp             GCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCC---EEEEGGGTCCT
T ss_pred             HCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCe---EEEEecCCccc
Confidence            4799999999986532   1345666653 45666633321     24567888887632101121   35565222110


Q ss_pred             --EE---EEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          72 --QS---VHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        72 --~~---~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                        ..   .....   ....+.|....... ..|.|.+.|..|.
T Consensus       169 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~  210 (220)
T 1pz5_B          169 GVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK  210 (220)
T ss_dssp             TEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred             ceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence              00   00011   12345665554433 5677888887763

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*

Probab=95.80  E-value=0.11  Score=41.29  Aligned_cols=90  Identities=26%  Similarity=0.333  Sum_probs=56.6

Q ss_pred             CCCCCCE-EEEE--eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe--------------------------
Q psy9139          26 SPPGVPN-ILLQ--STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV--------------------------   76 (197)
Q Consensus        26 ~~P~~p~-~~~~--~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~--------------------------   76 (197)
                      ..|..|. +.+.  ..+.+++.|.|+.|.. ...+..|.|...   +... ..+                          
T Consensus        33 ~~~~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~n---g~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (608)
T 2uvf_A           33 SSLDAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSA---GKLL-GKASDNNDNFSPAKPYIDHFYVNDKDNFQ  107 (608)
T ss_dssp             ---CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEET---TEEE-EEHHHHHHHHCSSHHHHHHHHHTCGGGCS
T ss_pred             cCCCCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEEC---CEEe-Eeecccccccccccccccccccccccccc
Confidence            3566776 6553  4678999999999865 345677887652   1000 000                          


Q ss_pred             -CCcccEEEECCCCCCCEEEEEEEEEcCCcC-CCCCCceEeecCCC
Q psy9139          77 -DAEYREFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAASTKGE  120 (197)
Q Consensus        77 -~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~-~~~s~~~~~~t~~~  120 (197)
                       .....++++.+|.|++.|.|.+.+....|. +..+..+.+.+...
T Consensus       108 ~~~~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~  153 (608)
T 2uvf_A          108 HKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK  153 (608)
T ss_dssp             CCCCCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred             ceeeeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence             112357899999999999999999877664 33445555555443

>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}

Probab=95.73  E-value=0.25  Score=35.07  Aligned_cols=25  Identities=8%  Similarity=-0.104  Sum_probs=20.8

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ...++|.++.......|.|.+.+..
T Consensus       234 ~~~L~I~~v~~~DsG~Y~C~a~~~~  258 (291)
T 2gki_A          234 DFTLTISSVQAEDLAVYYCKQSYYH  258 (291)
T ss_dssp             EEEEEESSCCGGGCEEEEEEEEETT
T ss_pred             EEEEEECCCCHHHCEEEEEEEccCC
Confidence            4468999999999999999998743

>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4

Probab=95.72  E-value=0.067  Score=38.34  Aligned_cols=102  Identities=8%  Similarity=0.014  Sum_probs=58.2

Q ss_pred             CeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEE---eecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe--
Q psy9139           2 VGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQ---STTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV--   76 (197)
Q Consensus         2 ~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~---~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~--   76 (197)
                      .|.|+|.+....-..+..+.+.+..+|..+.+...   -.....+.|.|....  ..|...+.|.|...+........  
T Consensus        60 ~~~y~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g--~~P~~~l~itW~kg~~~l~~~~~~~  137 (291)
T 1mq8_A           60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEG--GAPRANLTVVLLRGEKELKREPAVG  137 (291)
T ss_dssp             CCCCEEEEECSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECC--CBSTTTEEEEEESSSSEEEEEECCB
T ss_pred             CCeEEEEEEcCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecC--ccCCCCcEEEEEECCEEeecccCCC
Confidence            46899999644334566778888889988863332   345778889998754  33433456777644322221111  


Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ......+++..-.....-.|.|+|.+..+
T Consensus       138 ~~~~~~l~~~~~~~D~g~~~~C~A~~~l~  166 (291)
T 1mq8_A          138 EPAEVTTTVLVRRDHHGANFSCRTELDLR  166 (291)
T ss_dssp             TTEEEEEECCCSSSCSSCEEEEEEEEECG
T ss_pred             CCceEEEEeeeeeccCCceEEEEEEecCC
Confidence            11122344444444444566777777655

>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*

Probab=95.66  E-value=0.12  Score=35.50  Aligned_cols=22  Identities=9%  Similarity=-0.108  Sum_probs=19.6

Q ss_pred             cEEEECCCCCCCEEEEEEEEEc
Q psy9139          81 REFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..++|.++.+.....|.|.+.+
T Consensus       210 ~~L~I~~v~~~DsG~Y~C~~~~  231 (250)
T 3esu_F          210 AYMQLSSLTSVDSAVYFCARSG  231 (250)
T ss_dssp             EEEEECSCCGGGCEEEEEEEEC
T ss_pred             EEEEECCCCcccCEEEEEEEec
Confidence            3689999999999999999987

>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*

Probab=95.59  E-value=0.011  Score=39.76  Aligned_cols=27  Identities=11%  Similarity=-0.079  Sum_probs=23.8

Q ss_pred             ccEEEECCC-CCCCEEEEEEEEEcCCcC
Q psy9139          80 YREFTLTQL-KCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        80 ~~~~~i~~L-~p~~~y~~~v~a~~~~g~  106 (197)
                      ...+.|.++ .......|.|.|.|..|.
T Consensus       165 ~~~L~I~~v~~~~D~G~Y~C~A~N~~g~  192 (204)
T 1sy6_A          165 EDHLSLKEFSELEQSGYYVCYPRGSKPE  192 (204)
T ss_dssp             TTEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred             CCEEEEeeCCccccCEEEEEEeccCCCC
Confidence            567999999 888889999999999985

>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A

Probab=95.55  E-value=0.17  Score=38.66  Aligned_cols=50  Identities=12%  Similarity=0.093  Sum_probs=31.4

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCEEEEEe------ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPNILLQS------TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~~~~~~------~~~~~~~l~W~~~   50 (197)
                      +.|.|+|.|.|..|.......+.+.....+|.+.+..      .....+.|.|...
T Consensus       320 d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~  375 (475)
T 1iga_A          320 HGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLAR  375 (475)
T ss_pred             cCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEe
Confidence            4699999999999976544444443445556533222      1244578888763

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=95.53  E-value=0.021  Score=43.57  Aligned_cols=30  Identities=20%  Similarity=0.191  Sum_probs=26.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      .++.+|++|+|+|.|.|+|+|++.. .|..+
T Consensus       423 ~~~~~i~~L~p~t~Y~~~v~a~~~~-~g~~s  452 (461)
T 3csg_A          423 KSTATISGLSPGVDYTITVYAYSYY-YYYYS  452 (461)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECTT-SCBCS
T ss_pred             CceEEecCCCCCCEEEEEEEEEecc-CCCCC
Confidence            4579999999999999999999988 66543

>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C

Probab=95.40  E-value=0.32  Score=33.97  Aligned_cols=24  Identities=8%  Similarity=-0.072  Sum_probs=20.9

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ...++|.++.......|.|.+.|.
T Consensus       216 ~~~L~I~~v~~~DsG~Y~C~a~n~  239 (264)
T 2gjj_A          216 TAFMQLNSLTSEDSADYYCVRSGN  239 (264)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEECS
T ss_pred             EEEEEECcCCcccCEEEEEEEecC
Confidence            457899999999999999999985

>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A

Probab=95.38  E-value=0.029  Score=37.71  Aligned_cols=50  Identities=16%  Similarity=0.175  Sum_probs=33.1

Q ss_pred             CCeeEEEEEEeCCC-----CceeEEEEEecCCC-CCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFG-----KDDIYYQVTILSPP-GVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~~~~~~~~~~~~~P-~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|     .....+.+.+...| .+|.+.+..     .....+.|.|...
T Consensus        86 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~  146 (218)
T 3s96_B           86 DEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLIS  146 (218)
T ss_dssp             GCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred             cCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEEC
Confidence            47999999999887     33445677777655 566644322     2246788888763

>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}

Probab=95.37  E-value=0.06  Score=38.06  Aligned_cols=104  Identities=13%  Similarity=0.044  Sum_probs=56.8

Q ss_pred             CCeeEEEEEEeC---------CCCceeEEEEEecC---------------CCCCCE-EEEEeecCCeEEEEeeeCC-CC-
Q psy9139           1 MVGNYTCLADNI---------FGKDDIYYQVTILS---------------PPGVPN-ILLQSTTTHSISILWKPSY-DG-   53 (197)
Q Consensus         1 ~~g~y~c~a~n~---------~G~~~~~~~~~~~~---------------~P~~p~-~~~~~~~~~~~~l~W~~~~-~~-   53 (197)
                      ++|.|.|.+.|.         .+.......+.+..               +|.... .........++.|.|.... .. 
T Consensus        90 DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~~~~~  169 (280)
T 3fku_X           90 DTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNSNNVG  169 (280)
T ss_dssp             TCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCCCCCC
T ss_pred             hCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecCCCCC
Confidence            479999999987         11122334555554               221111 1244456778999998743 21 


Q ss_pred             CccccEEEEEEEeC--------------CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          54 GAIITHYIVSYRDR--------------TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        54 ~~~i~~y~v~~~~~--------------~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      ...+.||+-.-...              ...............++|.++.+.....|.|.+.+..
T Consensus       170 ~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~  234 (280)
T 3fku_X          170 NQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS  234 (280)
T ss_dssp             TTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred             CceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence            12355543110000              0011122223334568999999988888889888765

>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...

Probab=95.28  E-value=0.075  Score=35.50  Aligned_cols=49  Identities=14%  Similarity=0.055  Sum_probs=33.4

Q ss_pred             CCeeEEEEEEeCCC--CceeEEEEEecCCC-CCCEEEEEee-----cCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFG--KDDIYYQVTILSPP-GVPNILLQST-----TTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G--~~~~~~~~~~~~~P-~~p~~~~~~~-----~~~~~~l~W~~   49 (197)
                      ++|.|+|.|.|..|  .....+.+.+...+ .+|.+.+...     ....+.|.|..
T Consensus        79 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~  135 (211)
T 3tv3_L           79 DEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI  135 (211)
T ss_dssp             GCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEE
T ss_pred             HCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEe
Confidence            47999999999988  34556677777443 5666443321     35678888875

>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A

Probab=95.25  E-value=0.25  Score=37.66  Aligned_cols=50  Identities=22%  Similarity=0.178  Sum_probs=31.0

Q ss_pred             CCeeEEEEEEeCCCC------ceeEEEEEecC-CCCCCEEEEEe----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGK------DDIYYQVTILS-PPGVPNILLQS----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~------~~~~~~~~~~~-~P~~p~~~~~~----~~~~~~~l~W~~~   50 (197)
                      ++|.|.|.+.|..|.      ....+.+.+.. .+.+|.+....    .....+.|.|...
T Consensus        91 D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~  151 (475)
T 1iga_A           91 DTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQ  151 (475)
T ss_pred             hCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEe
Confidence            479999999998762      22344666653 44555432221    3456788888764

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=95.15  E-value=0.36  Score=32.12  Aligned_cols=91  Identities=13%  Similarity=0.110  Sum_probs=56.5

Q ss_pred             CcccEEEECCCCC-CCEEEEEEEEEcCCcC-CCCCCceEeecC-------------CC---------------------C
Q psy9139          78 AEYREFTLTQLKC-GTHYKINIKLVNSIGE-SKPSKTIAASTK-------------GE---------------------D  121 (197)
Q Consensus        78 ~~~~~~~i~~L~p-~~~y~~~v~a~~~~g~-~~~s~~~~~~t~-------------~~---------------------~  121 (197)
                      .....+.|.++.. .....|.|.+.|..|. ......+.+...             +.                     +
T Consensus        61 ~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p  140 (212)
T 2yd1_A           61 GGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTP  140 (212)
T ss_dssp             TTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCC
T ss_pred             CCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCC
Confidence            3346788988887 7778888888887765 221111222111             00                     0


Q ss_pred             CCCeeecCCCCCcc-----cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         122 QTDWINIPLSNLDE-----ALEMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       122 ~~~w~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|..........     .....+.|.++.....-.+.+.|.|..|.....
T Consensus       141 ~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~  192 (212)
T 2yd1_A          141 NIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSK  192 (212)
T ss_dssp             EEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred             eEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEE
Confidence            35566544322210     113468999999988899999999999977543

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=95.06  E-value=0.08  Score=36.08  Aligned_cols=129  Identities=9%  Similarity=0.136  Sum_probs=71.9

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC------CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTE------DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~------~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      .....+.|.|.....+..     .+.|.....      .............+.|.++.......|.|.+.+..|......
T Consensus        28 ~~G~~v~L~C~~~~~p~~-----~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~  102 (241)
T 3grw_A           28 PAANTVRFRCPAAGNPTP-----SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY  102 (241)
T ss_dssp             ETTSEEEEECCEECSSCC-----EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred             cCCCeEEEEEEecCCCCc-----eeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEE
Confidence            457788888876432222     344432110      010111223445789999999888899999888766432211


Q ss_pred             ceEeecC--------------------------------CCCCCCeee----cCCCCCcc----------------cccc
Q psy9139         112 TIAASTK--------------------------------GEDQTDWIN----IPLSNLDE----------------ALEM  139 (197)
Q Consensus       112 ~~~~~t~--------------------------------~~~~~~w~~----~~~~~~~~----------------~~~~  139 (197)
                      .+.+...                                +.+...|..    ........                ....
T Consensus       103 ~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (241)
T 3grw_A          103 TLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADV  182 (241)
T ss_dssp             EEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEE
T ss_pred             EEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCce
Confidence            1111110                                001566776    22221110                0133


Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         140 PLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .+.|.++.....-.+++.|.|..|....+..+
T Consensus       183 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l  214 (241)
T 3grw_A          183 RLRLANVSERDGGEYLCRATNFIGVAEKAFWL  214 (241)
T ss_dssp             EEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred             EEEECcCCcccCcEEEEEEecCcceEEEEEEE
Confidence            58889999888889999999998877554433

>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...

Probab=94.94  E-value=0.077  Score=35.47  Aligned_cols=50  Identities=16%  Similarity=0.122  Sum_probs=31.8

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCC-CCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPP-GVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P-~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|.. .....+.+...+ .+|.+.+..     .....+.|.|...
T Consensus        84 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~  140 (212)
T 1q0x_L           84 DEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTIT  140 (212)
T ss_dssp             GCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred             CCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEE
Confidence            4799999999987742 234456665443 566644432     2356788888763

>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2

Probab=94.91  E-value=0.014  Score=39.88  Aligned_cols=50  Identities=16%  Similarity=0.147  Sum_probs=29.4

Q ss_pred             CCeeEEEEEEeCCCC---ceeEEEEEecCCC-CCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGK---DDIYYQVTILSPP-GVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~---~~~~~~~~~~~~P-~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|.   ....+.+.+...| .+|.+....     .....+.|.|...
T Consensus       102 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~  160 (234)
T 2j6e_L          102 DEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLIS  160 (234)
T ss_dssp             TCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCC
T ss_pred             HCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEE
Confidence            579999999999882   2223445553333 444422211     2345788888764

>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*

Probab=94.89  E-value=0.068  Score=35.75  Aligned_cols=50  Identities=14%  Similarity=0.127  Sum_probs=33.5

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCEEEEEee-----cCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPNILLQST-----TTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~~~~~~~-----~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|. ......+.+..++.+|.+.+...     ....+.|.|...
T Consensus        82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~  137 (213)
T 3r06_A           82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVN  137 (213)
T ss_dssp             GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred             cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEe
Confidence            479999999998763 33455677766677776444321     245688888763

>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2

Probab=94.87  E-value=0.17  Score=38.21  Aligned_cols=102  Identities=13%  Similarity=0.030  Sum_probs=52.1

Q ss_pred             CCeeEEEEEEeCCCC---ceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGK---DDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW   71 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~---~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~   71 (197)
                      ++|.|+|.|.|..|.   ....+.+.+.. .+.+|.+....     .....+.|.|........+   ..+.|......-
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p---~~v~W~~~~~~~  166 (444)
T 1igt_B           90 DTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP---VTLTWNSGSLSS  166 (444)
T ss_dssp             GCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSC---CEEEEGGGTBCT
T ss_pred             HCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCC---cEEEEecCCCCC
Confidence            479999999998764   22345666663 34455432211     2456778887753100111   235554221110


Q ss_pred             --E---EEEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          72 --Q---SVHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        72 --~---~~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                        .   ......   ....+.|....... ..|.|.+.|..|.
T Consensus       167 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~  208 (444)
T 1igt_B          167 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS  208 (444)
T ss_dssp             TEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTT
T ss_pred             CeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCC
Confidence              0   000011   01346676666555 6777888887664

>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H

Probab=94.87  E-value=0.067  Score=36.03  Aligned_cols=50  Identities=12%  Similarity=0.103  Sum_probs=31.6

Q ss_pred             CCeeEEEEEEeCCCC----ceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGK----DDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~----~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|.    ....+.+.+.. ++.+|.+....     .....+.|.|...
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~  149 (219)
T 1c1e_H           90 DMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVK  149 (219)
T ss_dssp             GCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEE
T ss_pred             cCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcc
Confidence            479999999998752    22345666665 34556533322     2456788888763

>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}

Probab=94.85  E-value=0.16  Score=35.23  Aligned_cols=23  Identities=17%  Similarity=0.075  Sum_probs=18.2

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEc
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ...++|.++.......|.|.+.+
T Consensus       208 ~~~L~I~~v~~~DsG~Y~C~~~~  230 (259)
T 3omz_A          208 SVALTISALQLEDSAKYFCALGE  230 (259)
T ss_dssp             BCCEEESSCCGGGCSEEEEEEES
T ss_pred             EEEEEECCCChhHCEEEEEEEeC
Confidence            34588999998888888888864

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=94.80  E-value=0.58  Score=31.77  Aligned_cols=105  Identities=13%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             eeEEEEEEeCCCCcee-EEEE-E----ecCCCCCCEEEEEeecCCeEEEEeeeCCCC----C---------ccccEEEEE
Q psy9139           3 GNYTCLADNIFGKDDI-YYQV-T----ILSPPGVPNILLQSTTTHSISILWKPSYDG----G---------AIITHYIVS   63 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~-~~~~-~----~~~~P~~p~~~~~~~~~~~~~l~W~~~~~~----~---------~~i~~y~v~   63 (197)
                      +.|..++.-..|.... -... .    ....-+||.+.+. ....+|.+.-.+|...    +         -.-..|.|.
T Consensus        73 ~~Y~~RVrA~~g~~~S~w~~s~~F~p~~~t~igPP~v~l~-~~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~l~Y~V~  151 (211)
T 3dlq_R           73 ELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVTCI-SKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLE  151 (211)
T ss_dssp             CCEEEEEEEEETTSCEEEEECCCBCHHHHCBCCCCCEEEE-ECSSEEEEEECCCBCSCCC----CCBHHHHCTTCEEEEE
T ss_pred             ccEEEEEEEEeCCCcCCceeeeeEEehhcceeCCCEEEEE-EcCCEEEEEEECCCCccccCCCceeEHHHhcCCcEEEEE
Confidence            4566666555553222 2111 1    1234577776655 4455888888776421    1         012468888


Q ss_pred             EEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC--cCCCCC
Q psy9139          64 YRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI--GESKPS  110 (197)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~--g~~~~s  110 (197)
                      ++.....-+...  .....+.|.+|+|++.|-+++.+....  ..++++
T Consensus       152 ~~~~~s~~k~~~--~~~~~~~l~~L~p~t~YCv~v~~~~~~~~k~S~~s  198 (211)
T 3dlq_R          152 LQVNRTYQMHLG--GKQREYEFFGLTPDTEFLGTIMILVPTWAKESAPY  198 (211)
T ss_dssp             EEC----CEEEE--ESSSEEEEESCCTTCEEEEEEEEEEGGGTEECCCE
T ss_pred             EEECCCcEEEEe--cCCCEEEEccCCCCCcEEEEEEEEEcCCCCCCCCc
Confidence            874332222222  233678999999999999999886432  235554

>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*

Probab=94.73  E-value=0.059  Score=36.64  Aligned_cols=50  Identities=12%  Similarity=0.127  Sum_probs=33.6

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecCCCCCCEEEEEee-----cCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILSPPGVPNILLQST-----TTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~~P~~p~~~~~~~-----~~~~~~l~W~~~   50 (197)
                      ++|.|+|.+.|..|. ......+.+...+.+|.+.....     ....+.|.|...
T Consensus       105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~  160 (237)
T 3sob_L          105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN  160 (237)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEE
T ss_pred             hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEc
Confidence            479999999998763 23445667766777777544322     245688888763

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=94.69  E-value=0.29  Score=29.10  Aligned_cols=39  Identities=8%  Similarity=0.106  Sum_probs=29.5

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      ......+.|.++.......|.|.+.|..|.......+.+
T Consensus        59 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V   97 (114)
T 2cqv_A           59 SENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTV   97 (114)
T ss_dssp             CSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEE
T ss_pred             cCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEE
Confidence            344567999999999999999999999886544333433

>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A

Probab=94.68  E-value=0.1  Score=34.90  Aligned_cols=49  Identities=10%  Similarity=0.137  Sum_probs=29.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe-cCCCCCCEEEEEee-----cCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI-LSPPGVPNILLQST-----TTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~-~~~P~~p~~~~~~~-----~~~~~~l~W~~   49 (197)
                      +.|.|+|.|.|..|.......+.. .....+|.+.+...     ....+.|.|..
T Consensus        79 D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~  133 (207)
T 2vol_A           79 NGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMI  133 (207)
T ss_dssp             TTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEE
T ss_pred             CCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEE
Confidence            479999999999886432222211 13445665433322     25678888875

>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O

Probab=94.62  E-value=0.051  Score=32.45  Aligned_cols=33  Identities=18%  Similarity=0.047  Sum_probs=26.9

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ......+.|.++.......|.|.|.|..|....
T Consensus        65 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~   97 (107)
T 3knb_B           65 DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYA   97 (107)
T ss_dssp             ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             cCceEEEEEecCChhhCEEEEEEEEECCCEEEE
Confidence            344557899999999999999999999986543

>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B

Probab=94.49  E-value=0.67  Score=31.10  Aligned_cols=49  Identities=16%  Similarity=0.173  Sum_probs=29.6

Q ss_pred             CCeeEEEEEEeCC--CCceeEEEEEec-CCCCCCEEE-EEe---ecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIF--GKDDIYYQVTIL-SPPGVPNIL-LQS---TTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~--G~~~~~~~~~~~-~~P~~p~~~-~~~---~~~~~~~l~W~~   49 (197)
                      ++|.|.|.+.|..  ........+.+. .++.+|.+. ...   .....+.|.|..
T Consensus        92 DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~  147 (221)
T 3m8o_H           92 DTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLV  147 (221)
T ss_dssp             GCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEE
T ss_pred             HCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEE
Confidence            4799999999874  223344566665 445566533 221   244677777765

>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*

Probab=94.48  E-value=0.54  Score=31.66  Aligned_cols=49  Identities=16%  Similarity=0.095  Sum_probs=30.1

Q ss_pred             CCeeEEEEEEeCCCC---ceeEEEEEecCC-CCCCEEEEEe----ecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGK---DDIYYQVTILSP-PGVPNILLQS----TTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~---~~~~~~~~~~~~-P~~p~~~~~~----~~~~~~~l~W~~   49 (197)
                      ++|.|.|.+.|..+.   ....+.|.|... +.+|.+....    .....+.|.|..
T Consensus        90 DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~  146 (220)
T 2fbj_H           90 DTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLI  146 (220)
T ss_dssp             GCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEE
T ss_pred             hCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEE
Confidence            479999999998652   223456777653 3556543322    234567777765

>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*

Probab=94.44  E-value=0.14  Score=38.75  Aligned_cols=102  Identities=12%  Similarity=0.010  Sum_probs=51.7

Q ss_pred             CCeeEEEEEEeCCC------------CceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEE
Q psy9139           1 MVGNYTCLADNIFG------------KDDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIV   62 (197)
Q Consensus         1 ~~g~y~c~a~n~~G------------~~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v   62 (197)
                      ++|.|+|.|.|..|            .....+.+.+.. ++.+|.+....     .....+.|.|....  ..|- ...+
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g--~~P~-~~~v  166 (457)
T 1hzh_H           90 DTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD--YFPE-PVTV  166 (457)
T ss_dssp             GCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEES--BBSC-CCEE
T ss_pred             cCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeE--EeCC-CeEE
Confidence            47999999999876            223445666654 33455432221     24567778877632  1110 1235


Q ss_pred             EEEeCCCC-----cEEEEeCCc----ccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          63 SYRDRTED-----WQSVHVDAE----YREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        63 ~~~~~~~~-----~~~~~~~~~----~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .|......     .........    ...+.|....... ..|.|.+.|..+.
T Consensus       167 ~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~  218 (457)
T 1hzh_H          167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN  218 (457)
T ss_dssp             EETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGT
T ss_pred             EEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCC
Confidence            55422110     011111111    1256777766554 6667777776543

>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I

Probab=94.32  E-value=0.82  Score=31.43  Aligned_cols=116  Identities=14%  Similarity=0.079  Sum_probs=64.2

Q ss_pred             eeEEEEEEeCCCCcee-EEE-----EEecCCCCCCEEEEEeecCCeEEEEeeeCCC---C-Cccc----------cEEEE
Q psy9139           3 GNYTCLADNIFGKDDI-YYQ-----VTILSPPGVPNILLQSTTTHSISILWKPSYD---G-GAII----------THYIV   62 (197)
Q Consensus         3 g~y~c~a~n~~G~~~~-~~~-----~~~~~~P~~p~~~~~~~~~~~~~l~W~~~~~---~-~~~i----------~~y~v   62 (197)
                      +.|..++.-..|.... ...     ......-+||.+.+.. ....|.|.-..|..   + ...+          ..|.|
T Consensus        79 ~~y~~RVrA~~g~~~S~w~~s~~F~p~~~t~igPP~v~l~~-~~~~i~V~i~~P~~~~~g~~~~l~~~~~~~~~~~~Y~v  157 (229)
T 1fyh_B           79 NSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRK-EEKQIMIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNV  157 (229)
T ss_dssp             SCEEEEEEEEETTEECCCEECCCBCHHHHSBCCCCEEEEEE-CSSEEEEEEECCGGGC-----------CCSCSEEEEEE
T ss_pred             eeEEEEEEEEcCCcccCCEeccceeeeeeeEECCCeEEEEE-eCCEEEEEEeCCCcccCCCcceeeecCcccccceEEEE
Confidence            4566666655553222 111     1112455888766653 35588888877642   1 0112          25778


Q ss_pred             EEEeCCCCcEEEEeC----C---cccEEEECCCCCCCEEEEEEEEEcC--CcCCCCCCceEeecCC
Q psy9139          63 SYRDRTEDWQSVHVD----A---EYREFTLTQLKCGTHYKINIKLVNS--IGESKPSKTIAASTKG  119 (197)
Q Consensus        63 ~~~~~~~~~~~~~~~----~---~~~~~~i~~L~p~~~y~~~v~a~~~--~g~~~~s~~~~~~t~~  119 (197)
                      .++.....-......    .   ....+.|.+|.|++.|-++|++...  .-.+.+|....+.+.+
T Consensus       158 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~YCv~v~~~~~~~~k~s~~S~~~Ci~t~~  223 (229)
T 1fyh_B          158 YVRMNGSEIQYKILTQKEDDCDEIQCQLAIPVSSLNSQYCVSAEGVLHVWGVTTEKSKEVCITIFN  223 (229)
T ss_dssp             EEEETTEEEEEEEESSSCTTBCSSEEEEEEECCTTCCEEEEEEEEEETTTCCBCCCCCCEEEECCC
T ss_pred             EEEECCCCeeEEEEeecccCccccceeEEEeeCCCCCeEEEEEEEEeccCCccCCCCCCEeEecCC
Confidence            776433221111111    1   2345888899999999999999732  2346677777776643

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=94.26  E-value=0.14  Score=33.52  Aligned_cols=95  Identities=13%  Similarity=0.096  Sum_probs=54.5

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeecC------------------------------CCCCCCee
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK------------------------------GEDQTDWI  126 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t~------------------------------~~~~~~w~  126 (197)
                      ......+.|.++.......|.|.+.|..|.......+.+...                              +.+...|.
T Consensus        59 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~  138 (197)
T 3lcy_A           59 DGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWF  138 (197)
T ss_dssp             SSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred             CCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEe
Confidence            344457888888888888888988887664322211111100                              00145565


Q ss_pred             ecCCCCCcc--------cccceEEEcCCCC-CCeEEEEEEEEcCCCCCCcceEE
Q psy9139         127 NIPLSNLDE--------ALEMPLVIENLLP-ATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       127 ~~~~~~~~~--------~~~~~~~i~~L~p-~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      .........        .....+.|.++.. ...-.+++.|.|..|.......+
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l  192 (197)
T 3lcy_A          139 HGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDV  192 (197)
T ss_dssp             ETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEE
T ss_pred             ECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEE
Confidence            533222110        0124577888874 45668889999998876554433

>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}

Probab=94.26  E-value=0.055  Score=36.81  Aligned_cols=50  Identities=16%  Similarity=0.192  Sum_probs=30.3

Q ss_pred             CCeeEEEEEEeCCCCc-eeEEEEEecCCCCCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFGKD-DIYYQVTILSPPGVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~-~~~~~~~~~~~P~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|+|.|.|..|.. .....+.+...+.+|.+.+..     .....+.|.|...
T Consensus       104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~  159 (233)
T 3bqu_C          104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLN  159 (233)
T ss_dssp             CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred             HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEc
Confidence            5799999999987742 223345666655667644322     1356788888763

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=94.15  E-value=0.24  Score=33.03  Aligned_cols=89  Identities=16%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             cccEEEECCCC-CCCEEEEEEEEEcCCcCCCCCCceEeec-------------CC---------------------CCCC
Q psy9139          79 EYREFTLTQLK-CGTHYKINIKLVNSIGESKPSKTIAAST-------------KG---------------------EDQT  123 (197)
Q Consensus        79 ~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~~s~~~~~~t-------------~~---------------------~~~~  123 (197)
                      ....+.|.++. ......|.|.+.|..|.......+.+..             .+                     .+..
T Consensus        61 ~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v  140 (212)
T 2yd6_A           61 SGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEI  140 (212)
T ss_dssp             TEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred             CceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeE
Confidence            34568888884 7888889999988876532211121111             00                     0145


Q ss_pred             CeeecCCCCCcc-----------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         124 DWINIPLSNLDE-----------ALEMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       124 ~w~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      .|..........           .....+.|.++.....-.+.+.|.|..|....
T Consensus       141 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s  195 (212)
T 2yd6_A          141 TWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS  195 (212)
T ss_dssp             EEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred             EEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence            566543322110           01356889999998888999999999997653

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=94.00  E-value=0.2  Score=32.83  Aligned_cols=93  Identities=14%  Similarity=0.123  Sum_probs=54.9

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec--------------------------------CCCCCCCe
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST--------------------------------KGEDQTDW  125 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t--------------------------------~~~~~~~w  125 (197)
                      .....+.|.++.......|.|.+.|..|.......+.+..                                .+.+...|
T Consensus        59 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W  138 (197)
T 2j8h_A           59 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITW  138 (197)
T ss_dssp             TTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEE
T ss_pred             CCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEE
Confidence            3344788899988888888888888766532211111110                                00114566


Q ss_pred             eecCCCCCcc--------cccceEEEcC-CCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         126 INIPLSNLDE--------ALEMPLVIEN-LLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       126 ~~~~~~~~~~--------~~~~~~~i~~-L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ..........        .....+.|.+ +.....-.+.+.|.|..|....+..
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~  192 (197)
T 2j8h_A          139 QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE  192 (197)
T ss_dssp             EESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred             EECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEE
Confidence            6543322110        1134677777 8888788899999999887544433

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=93.97  E-value=0.089  Score=34.45  Aligned_cols=93  Identities=11%  Similarity=0.149  Sum_probs=56.4

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEeec---------CCC---------------------CCCCee
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST---------KGE---------------------DQTDWI  126 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t---------~~~---------------------~~~~w~  126 (197)
                      ......+.|.++.......|.|.+.|..|.......+.+..         ...                     +...|.
T Consensus        59 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~  138 (194)
T 2a38_A           59 SDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFY  138 (194)
T ss_dssp             ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEE
T ss_pred             CCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEE
Confidence            33456788999999888899999988776543222222211         000                     045565


Q ss_pred             ecCCCCCcc--------cccceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         127 NIPLSNLDE--------ALEMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       127 ~~~~~~~~~--------~~~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      .........        .....+.|.++.+...-.+++.|.|..|....+.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~  189 (194)
T 2a38_A          139 RDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTA  189 (194)
T ss_dssp             ETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEE
T ss_pred             ECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEE
Confidence            543322110        1122577888888888889999999988655433

>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}

Probab=93.97  E-value=0.77  Score=29.78  Aligned_cols=89  Identities=20%  Similarity=0.310  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ..|+.|.+.++.++..++.+.|.+-.-+...+.. .+-|+.. -....+.-+-..+...|.+|.-.+.|.|++......|
T Consensus        68 hkpespvlkivnvtqtscvlawdplklgsaklks-lilyrkg-irsmvipnpfkvtttkisglsvdtpyefqlklittsg  145 (290)
T 4gns_A           68 HKPESPVLKIVNVTQTSCVLAWDPLKLGSAKLKS-LILYRKG-IRSMVIPNPFKVTTTKISGLSVDTPYEFQLKLITTSG  145 (290)
T ss_dssp             CCCCCCCEEEEEECSSCEEEEECCCCCSSSCEEE-EEEESSS-TTSCBCSCTTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCCCceEEEEeeccceEEEEeCccccchHHhhh-hhhhhhc-ceeeecCCCeeEEEEEecceecCCcceeEEEEEeccC
Confidence            4688888999999999999999986654444433 3444422 1111111133456678899999999999998887665


Q ss_pred             CCCCCCceEeec
Q psy9139         106 ESKPSKTIAAST  117 (197)
Q Consensus       106 ~~~~s~~~~~~t  117 (197)
                      .- ++..+..++
T Consensus       146 tl-wsekvilrt  156 (290)
T 4gns_A          146 TL-WSEKVILRT  156 (290)
T ss_dssp             EE-EEEEEEEEC
T ss_pred             ce-ehhheeeee
Confidence            32 333344443

>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=93.93  E-value=0.25  Score=24.05  Aligned_cols=36  Identities=19%  Similarity=0.451  Sum_probs=27.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYR   65 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~   65 (197)
                      ..|.+|. +.+...+.+++.+.|.+..    ....|.++.+
T Consensus         5 ~kP~~PsrVQLvRAst~sLEv~W~~vp----tA~~YiLQiq   41 (45)
T 4go6_A            5 EKPPPPARVQLVRANTNSLEVSWGAVA----TADSYLLQLQ   41 (45)
T ss_dssp             SCCCCCEEEEEEEECSSCEEEEEECCT----TCSEEEEEEE
T ss_pred             ccCCCcceEEEEEeccceEEEEcCCCc----chheeEEEEE
Confidence            4577776 8888899999999999743    2356888765

>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2

Probab=93.90  E-value=0.11  Score=37.83  Aligned_cols=49  Identities=12%  Similarity=0.019  Sum_probs=32.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEec-CCCCCCEEEEEe-----ecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTIL-SPPGVPNILLQS-----TTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~-~~P~~p~~~~~~-----~~~~~~~l~W~~   49 (197)
                      ++|.|+|.|.|..+.....+.+.+. .++.+|.+....     .....+.|.|..
T Consensus        90 D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~  144 (344)
T 1za6_B           90 DTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV  144 (344)
T ss_dssp             GCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred             cCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence            4799999999966555555677776 455666533222     245677787765

>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2

Probab=93.88  E-value=0.063  Score=40.43  Aligned_cols=102  Identities=10%  Similarity=-0.009  Sum_probs=51.5

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCc-E-
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-Q-   72 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~-~-   72 (197)
                      ++|.|+|.|.|..+.....+.+.+.. .+.+|.+....     .....+.|.|........+   ..+.|....... . 
T Consensus        89 D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p---~~v~W~k~~~~~~~~  165 (434)
T 1igy_B           89 DSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP---VTVTWNSGSLSSGVH  165 (434)
T ss_dssp             GCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSC---CEEEETTTTBCSSEE
T ss_pred             HCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCC---eEEEEeeCCcCCCeE
Confidence            47999999999655544556666653 34445422211     2456777777753110011   135554221110 0 


Q ss_pred             ---EEEeCC---cccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          73 ---SVHVDA---EYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        73 ---~~~~~~---~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                         ......   ....+.|....... ..|.|.+.|..|.
T Consensus       166 ~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~  204 (434)
T 1igy_B          166 TFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASS  204 (434)
T ss_dssp             ECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTT
T ss_pred             ecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCC
Confidence               000011   01245666666444 6677888887765

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}

Probab=93.79  E-value=0.077  Score=36.21  Aligned_cols=36  Identities=17%  Similarity=0.126  Sum_probs=26.1

Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCC------CCCcceEEEEee
Q psy9139         140 PLVIENLLPATRYELTISAKNDAG------STNKNYVFATLS  175 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G------~~~~~~~~~t~~  175 (197)
                      .+.+.+|.|++.|.|+|||....|      +|+.+..+...+
T Consensus       165 ~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T  206 (219)
T 3tgx_A          165 SLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQT  206 (219)
T ss_dssp             EECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEEC
T ss_pred             EEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEEC
Confidence            456779999999999999997754      244455554444

>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}

Probab=93.76  E-value=0.27  Score=33.18  Aligned_cols=49  Identities=12%  Similarity=0.157  Sum_probs=29.1

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEE-ecCCCCCCEEEEEee-----cCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVT-ILSPPGVPNILLQST-----TTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~-~~~~P~~p~~~~~~~-----~~~~~~l~W~~   49 (197)
                      +.|.|+|.|.|..+.......+. +.....+|.+.+...     ....+.|.|..
T Consensus        87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~  141 (218)
T 2rgs_A           87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLV  141 (218)
T ss_dssp             TTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEE
T ss_pred             CCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEE
Confidence            47999999999987542222221 124455666433321     24678888876

>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...

Probab=93.68  E-value=0.22  Score=33.24  Aligned_cols=49  Identities=16%  Similarity=0.172  Sum_probs=29.0

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEe-cCCCCCCEEEEEee-----cCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTI-LSPPGVPNILLQST-----TTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~-~~~P~~p~~~~~~~-----~~~~~~l~W~~   49 (197)
                      +.|.|+|.|.|..|.......+.. .....+|.+.+...     ....+.|.|..
T Consensus        79 d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~  133 (207)
T 1l6x_A           79 NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLV  133 (207)
T ss_dssp             TTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEE
T ss_pred             CCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEE
Confidence            379999999999886533322211 13455665333321     24557888876

>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...

Probab=93.63  E-value=0.3  Score=33.20  Aligned_cols=49  Identities=14%  Similarity=0.035  Sum_probs=27.3

Q ss_pred             CCeeEEEEEEeCCCC-ceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeee
Q psy9139           1 MVGNYTCLADNIFGK-DDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKP   49 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~-~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~   49 (197)
                      ++|.|.|.+.|..+. ....+.|.|.. ++.+|.+....     .....+.|.|..
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~  145 (227)
T 1mju_H           90 DSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLV  145 (227)
T ss_dssp             GCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEE
T ss_pred             cCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEe
Confidence            479999999986432 12334666665 34556533221     234567787775

>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}

Probab=93.57  E-value=0.61  Score=32.44  Aligned_cols=24  Identities=4%  Similarity=-0.129  Sum_probs=20.1

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ...+.|.++.......|.|.+.+.
T Consensus       231 ~~~L~I~~v~~~DsG~Y~C~a~~~  254 (268)
T 1x9q_A          231 SVYLQMNNLRVEDTGIYYCTGASY  254 (268)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEEET
T ss_pred             EEEEEECCCCHHHCEEEEEEEccC
Confidence            356899999999999999998864

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}

Probab=93.56  E-value=0.037  Score=31.67  Aligned_cols=16  Identities=25%  Similarity=0.281  Sum_probs=13.8

Q ss_pred             CCeeEEEEEEeCCCCc
Q psy9139           1 MVGNYTCLADNIFGKD   16 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~   16 (197)
                      ++|.|+|.|.|..|..
T Consensus        61 d~G~Y~C~a~n~~g~~   76 (91)
T 3bfo_A           61 HQGTYWCHVYNDRDSQ   76 (91)
T ss_dssp             GCEEEEEEEECSSCEE
T ss_pred             hCEEEEEEEEcCCCCE
Confidence            4799999999999943

>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*

Probab=93.49  E-value=0.26  Score=33.33  Aligned_cols=50  Identities=12%  Similarity=-0.002  Sum_probs=30.9

Q ss_pred             CCeeEEEEEEeCCC-----C---ceeEEEEEecC-CCCCCEEEEEe-----ecCCeEEEEeeeC
Q psy9139           1 MVGNYTCLADNIFG-----K---DDIYYQVTILS-PPGVPNILLQS-----TTTHSISILWKPS   50 (197)
Q Consensus         1 ~~g~y~c~a~n~~G-----~---~~~~~~~~~~~-~P~~p~~~~~~-----~~~~~~~l~W~~~   50 (197)
                      ++|.|.|.+.|..|     .   ....+.|.|.. ++.+|.+....     .....+.|.|...
T Consensus        90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~  153 (225)
T 1op3_H           90 DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVK  153 (225)
T ss_dssp             GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEE
T ss_pred             hCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEE
Confidence            47999999999875     2   11345666665 44566533321     2356778888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	197
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	4e-16
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	6e-16
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	1e-14
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	2e-14
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	2e-14
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	3e-14
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-13
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	3e-13
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	6e-13
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	1e-12
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	1e-12
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	8e-12
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	8e-12
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	1e-11
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	9e-11
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	1e-10
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	1e-10
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	2e-10
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-10
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	2e-10
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	3e-10
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	4e-10
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	4e-10
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	2e-06
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	6e-10
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	6e-10
d1x5ia1	113	b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [	1e-09
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	1e-09
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	1e-09
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	3e-09
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	3e-09
d1bqua1	95	b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-	4e-09
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	4e-09
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	7e-09
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	8e-09
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	8e-09
d1cd9b1	107	b.1.2.1 (B:1-107) Granulocyte colony-stimulating f	9e-09
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	9e-09
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	1e-08
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	1e-08
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	1e-08
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	2e-08
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	2e-08
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	2e-08
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	2e-08
d1f6fb2	103	b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattu	3e-08
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	3e-08
d1n26a3	104	b.1.2.1 (A:196-299) Interleukin-6 receptor alpha c	3e-08
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	6e-08
d2haza1	101	b.1.2.1 (A:489-589) Neural cell adhesion molecule	9e-08
d1v5ja_	108	b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId	2e-07
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-07
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-07
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	2e-07
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-07
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	3e-07
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	5e-07
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	6e-07
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	7e-07
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	1e-06
d2fnba_	95	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	1e-06
d2cuia1	101	b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens)	1e-06
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	2e-06
d2vkwa2	93	b.1.2.1 (A:601-693) Neural cell adhesion molecule	2e-06
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	6e-06
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	7e-06
d1fyhb1	98	b.1.2.1 (B:12-109) Interferon-gamma receptor alpha	8e-06
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	1e-05
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	3e-05
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	8e-05
d2cuha1	102	b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens)	8e-05
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	1e-04
d2cqva1	101	b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [T	1e-04
d2gysa4	100	b.1.2.1 (A:317-416) Common beta-chain in the GM-CS	3e-04
d1erna2	105	b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor	5e-04
d2gysa2	114	b.1.2.1 (A:104-217) Common beta-chain in the GM-CS	9e-04
d1y6kr1	99	b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10	0.001
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	0.002

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 4e-16
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 2/97 (2%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQS--VHVDAEYREF 83
             P  P   L +    +I++ W   +DG + +  YI+   +    W      VD +    
Sbjct: 12  HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSV 71

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
           T+  L     Y+  +  VN +G+ + SK     +  E
Sbjct: 72  TVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 108

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 6e-16
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 27  PPGVPN--ILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREF 83
           PPG      L        I + W  P  DGG+ I+ Y V      +D           E 
Sbjct: 1   PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVEC 60

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           T++ L  G  Y   ++  N +G    S+    +T
Sbjct: 61  TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITT 94

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 1e-14
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH-VDAEYREFTLT 86
           PG P +++ +T  ++  + W P  +    +  Y + Y    E   +      + + FT+T
Sbjct: 1   PGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVT 60

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            L  GT Y   +   N  G  +  +    + 
Sbjct: 61  GLHKGTTYIFRLAAKNRAGLGEEFEKEIRTP 91

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 2e-14
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH-VDAEYREFTL 85
           P  V  I  +     S+S+LW+       II  Y + Y ++ ++ QS   + A     T+
Sbjct: 4   PSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATV 63

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           + LK GT Y   ++   S G  + S+ +   T 
Sbjct: 64  SGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 2e-14
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVD 77
           + +++  GVP    N   +  +  SI + W P       I +Y + Y+D     +     
Sbjct: 2   IQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDT--IANYELVYKDGEHGEEQRITI 59

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
                + L  LK  + Y   +   +  G    +  I+A T 
Sbjct: 60  EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 100

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.0 bits (155), Expect = 3e-14
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 21  QVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVH-- 75
               LSPP  P    + + +  S+ + W P  +GG  I  + V Y+   +  DW      
Sbjct: 4   DHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA 63

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           +        +T L+ G  YK  ++ +N +GES+PS  
Sbjct: 64  IPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAP 100

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 3e-13
 Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 2/99 (2%)

Query: 23  TILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV-DAEY 80
           T+   P +P    + + T +S+++ WK   D G+ I ++++ + +   + +         
Sbjct: 6   TLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQ 65

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKG 119
           ++F +T+L      K  +   N  G S  S+ +   T G
Sbjct: 66  KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG 104

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 3e-13
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY 80
           +V +  P   PN+   + +  SI++ W+    G   I +Y + Y       +   VD   
Sbjct: 7   EVQLPGPA--PNLRAYAASPTSITVTWETPVSGNGEIQNYKL-YYMEKGTDKEQDVDVSS 63

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +T+  LK  T Y   +   N  G    +  +A  T  +
Sbjct: 64  HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 103

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 6e-13
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 1/95 (1%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIIT-HYIVSYRDRTEDWQSVHVDAEYREFTL 85
           P  VP +   S T  SI++ W        II  + I  Y     ++ S    ++     +
Sbjct: 1   PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARI 60

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             L+ G  Y + ++     G  K S  +   T  +
Sbjct: 61  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 95

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-12
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSY----RDRTEDWQSVHVDAEYR 81
           SPP    ++ +     +I + W+P  +    IT YI+ Y         DW    V     
Sbjct: 13  SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRL 72

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
              + +L   T Y   I+  NS G    S+ +   T
Sbjct: 73  THQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 108

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-12
 Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVH 75
             + +   VP    ++        S+ + W+   +   I+T Y +S+   +RT    + +
Sbjct: 2   QLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHY 61

Query: 76  VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           +     E+ +T L   T Y I +  + S G+ + S +  +S 
Sbjct: 62  LPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 8e-12
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 21  QVTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIV--SYRDRTEDWQSVHVD 77
              +   PG P    +   T +S+++ W+P   G    + YI+    +  +  WQ+V   
Sbjct: 9   NYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH 68

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
            +   +T+  L+  T Y   ++ +N  G S PS  
Sbjct: 69  VKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPM 103

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 8e-12
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 4/100 (4%)

Query: 23  TILSPPGVP-NILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTEDWQSVH--VDA 78
           T+   PG P  IL     T S+ ++W  P+   G I+ + I    + T    +    +  
Sbjct: 16  TLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAP 75

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
             R++T T LK  + Y   I      G  + ++ +  +T+
Sbjct: 76  SARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 1e-11
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDWQSVHV--D 77
            T    P  P +++    +T  I + W+ P+ D       Y V Y       + V     
Sbjct: 5   ATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSH 64

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
               + T+  L   T Y   +   N  G  + S  +   T+ E
Sbjct: 65  PGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 107

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 9e-11
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           L  P   N   ++  +  I   W P    G  + + +  +     + ++  +D++     
Sbjct: 2   LGAPQ--NPNAKAAGSRKIHFNWLPPS--GKPMGYRVKYWIQGDSESEAHLLDSKVPSVE 57

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
           LT L     Y++ +    + GE   S  ++  T 
Sbjct: 58  LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.1 bits (129), Expect = 1e-10
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 27  PPGVP-NILLQSTTTHSISILWK-PSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE-- 82
           P   P ++ ++  T  + ++ W+ P   G   I  Y+V Y     +              
Sbjct: 1   PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 60

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
           FT+  L  G      +  VN  G S+P+  
Sbjct: 61  FTVKDLPTGARILFRVVGVNIAGRSEPATL 90

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 1e-10
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 9/100 (9%)

Query: 27  PPGVP-NILLQSTTTHSISILWKP--SYDGGAIITHYIVSYRD------RTEDWQSVHVD 77
           P G P ++ LQ  T+ SI + WK         +I  Y + YR+             +   
Sbjct: 8   PDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKAT 67

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            +   +TL  LK    Y + ++  N  G    S  I A+T
Sbjct: 68  GDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATT 107

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 3/91 (3%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW---QSVHVDAEYREF 83
           P   P  L       +  +           IT Y ++               V A+    
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 60

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
           T   L  G  Y +++  V    ES P     
Sbjct: 61  TFDNLSPGLEYNVSVYTVKDDKESVPISDTI 91

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 2e-10
 Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 12/104 (11%)

Query: 27  PPGVP-NILLQSTTTHSISILWKP--SYDGGAIITHYIVSYRDRTED---------WQSV 74
           P   P N+ +    +    + W P         +  Y + Y                + +
Sbjct: 14  PMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKIL 73

Query: 75  HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
                     L  L+  +HY +N+++VN  GE   S     +T 
Sbjct: 74  TFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP 117

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-10
 Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 5/93 (5%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           L  P   ++  +  T  +  + W            Y++S+       Q + +        
Sbjct: 2   LEAPR--DLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQ 56

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           L  L   T Y   ++ +       P  T   + 
Sbjct: 57  LLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTG 89

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.6 bits (125), Expect = 3e-10
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           L  P   ++++ +++  SIS++W  +      I HY +++   +     V V  +   +T
Sbjct: 1   LDSPR--DLMVTASSETSISLIWTKASG---PIDHYRITFTPSSGISSEVTVPRDRTSYT 55

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
           LT L+ G  Y I+I       +S  S   A
Sbjct: 56  LTDLEPGAEYIISITAERGRQQSLESTVDA 85

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (124), Expect = 4e-10
 Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
                P +     +     + W+     G  +T Y + +       Q  +       + +
Sbjct: 2   DQCKPPQV--TCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPG-LSYEI 58

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
             L   T Y   ++ ++ +G    S+ +A  T 
Sbjct: 59  KGLSPATTYYCRVQALSVVGAGPFSEVVACVTP 91

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 4e-10
 Identities = 28/183 (15%), Positives = 47/183 (25%), Gaps = 49/183 (26%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           + P VP + +  S ++  I + WKP  D    ITHY+V +  + ED +      E     
Sbjct: 1   TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELF----ELDYCL 56

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTDWINIPLS------------- 131
                    +    +  +S   ++     +A            I                
Sbjct: 57  KGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDY 116

Query: 132 -------------------------------NLDEALEMPLVIENLLPATRYELTISAKN 160
                                                +  LVI  L   T Y + + A N
Sbjct: 117 LHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACN 176

Query: 161 DAG 163
              
Sbjct: 177 QDT 179

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 2e-06
 Identities = 9/91 (9%), Positives = 24/91 (26%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
              +     + T    +  +           +   V      E+ +            ++
Sbjct: 101 LKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVIS 160

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            L+  T Y+I ++  N     +     A  +
Sbjct: 161 GLRHFTGYRIELQACNQDTPEERCSVAAYVS 191

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 6e-10
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 23  TILSPPGVP--NILLQSTTTHSISILWKPSYDGG-AIITHYIVSYRDRT-EDWQSVHVDA 78
           T    PG+P    +     +HS  I W P  D G A I  Y+V   + +  +   +    
Sbjct: 6   TCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSG 65

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             RE    +L  G  Y++ +  ++  G+S  S+++   T
Sbjct: 66  ATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.8 bits (123), Expect = 6e-10
 Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRTEDWQSVHVDAEYREF 83
           +      ++ L       + + W  S          Y +   ++ E+W  + +       
Sbjct: 1   AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL---EPRV 57

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            LT+L+  T Y + ++ +  +G    S      T
Sbjct: 58  LLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (122), Expect = 1e-09
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
             P VP+ L       SI + W P  +   ++  Y + Y   +   Q++ VD + R +T+
Sbjct: 19  RVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTI 78

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
             L   +HY I +K  N++GE  P    +A T+
Sbjct: 79  ENLDPSSHYVITLKAFNNVGEGIPL-YESAVTR 110

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-09
 Identities = 17/117 (14%), Positives = 30/117 (25%), Gaps = 12/117 (10%)

Query: 14  GKDDIYYQVTILSPPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDR----- 67
           G ++      +LS    P          ++ + W  PS           V          
Sbjct: 7   GDEETKAFEALLSNIVKPVA--SDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLI 64

Query: 68  ----TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
                +         E    TL  LK    Y   ++   +  +  PS+    +T   
Sbjct: 65  SSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-09
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 27  PPGVP-NILLQSTTTHSISILWKP--SYDGGAIITHYIVSYRDRTEDWQSVHV--DAEYR 81
           P   P N+ L+   + SI I W+P         IT Y + YR  +               
Sbjct: 11  PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQL 70

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              +  L  GT Y   +  +   G    +  ++A T   D
Sbjct: 71  SQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 110

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 3e-09
 Identities = 20/92 (21%), Positives = 35/92 (38%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
           S P  P +     T  S+             I++ +    + +        D E   +T+
Sbjct: 2   SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTV 61

Query: 86  TQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             L+  T YK  +   NS G+S PS+ +  +T
Sbjct: 62  KNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 93

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 50.3 bits (119), Expect = 3e-09
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 6/101 (5%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRDRTEDWQSVHV---DAEY 80
           P   P N++ Q T  +++ I W P    +  A   HY VS++         +    D   
Sbjct: 4   PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 63

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
               +        Y I +  +N  GES  +        GED
Sbjct: 64  NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 104

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 4e-09
 Identities = 9/86 (10%), Positives = 22/86 (25%), Gaps = 2/86 (2%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW-QSVHVDAEYREFT 84
           PP  P N+         +   W    +        + S     +        D       
Sbjct: 3   PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTV 62

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPS 110
                   + ++ ++  N++G+    
Sbjct: 63  DYSTVYFVNIEVWVEAENALGKVTSD 88

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 4e-09
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 6/97 (6%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----TEDWQSVHVDAEY 80
           P   P  +     +  +I I W  +             Y  R       + +  + +A  
Sbjct: 1   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             + +T LK  T Y+ ++ +      S  S T   +T
Sbjct: 61  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 97

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 7e-09
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           L  P    I     T +S ++ W         IT Y + +     +   +   V      
Sbjct: 1   LDSPT--GIDFSDITANSFTVHWIAPRA---TITGYRIRHHPEHFSGRPREDRVPHSRNS 55

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKP 109
            TLT L  GT Y ++I  +N   ES  
Sbjct: 56  ITLTNLTPGTEYVVSIVALNGREESPL 82

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.7 bits (115), Expect = 8e-09
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 32  NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCG 91
           ++ +   T  ++S+ W+           Y ++Y   +     + +  +   F L  L  G
Sbjct: 5   DLEVSDPTETTLSLRWRRPVAK---FDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAG 61

Query: 92  THYKINIKLVNSIGESKPSKTIAAST 117
           T Y I++       +SKP+ TI  ST
Sbjct: 62  TEYTISLVAEKGRHKSKPT-TIKGST 86

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 8e-09
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKP-SYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREF 83
           +  P   N+ + S T  S+ + W     +       Y     ++  +           + 
Sbjct: 1   IDAPK--NLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKT 58

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           TLT L  GT Y + I  V +  +S P+ T+ A T
Sbjct: 59  TLTDLVPGTEYGVGISAVMNSKQSIPA-TMNART 91

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.2 bits (116), Expect = 9e-09
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 10/94 (10%)

Query: 27  PPGVPNIL--LQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ--------SVHV 76
           PP  P+ L  L   TT+S+   W+P  +     +  + S+R R +               
Sbjct: 4   PPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKK 63

Query: 77  DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
                      L    +  I ++  N +G S+  
Sbjct: 64  RQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESP 97

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 9e-09
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDW--QSVHVDAEYREF 83
           S P    I    +  +S  I W         I+ YI+ +R +      +   +      +
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQPS--HISKYILRWRPKNSVGRWKEATIPGHLNSY 58

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           T+  LK G  Y+  +  +   G  + ++    +T
Sbjct: 59  TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.9 bits (115), Expect = 1e-08
 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIV----SYRDRTEDWQSVHVDAEYR 81
           + P +      + TT  +  ++ P+ +    I  + +    +  D   D++   V+ +  
Sbjct: 3   AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY 62

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGE 120
             +++ L+  T Y I ++  N  GES+ S  +   TK  
Sbjct: 63  WHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKAR 101

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-08
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTL 85
           P   ++   +    ++ + W P       +T+++V Y      ED   + +        L
Sbjct: 2   PPPTDLRFTNIGPDTMRVTWAPPPSID--LTNFLVRYSPVKNEEDVAELSISPSDNAVVL 59

Query: 86  TQLKCGTHYKINIKLVNSIGESKPS 110
           T L  GT Y +++  V    ES P 
Sbjct: 60  TNLLPGTEYVVSVSSVYEQHESTPL 84

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.2 bits (116), Expect = 1e-08
 Identities = 17/113 (15%), Positives = 24/113 (21%), Gaps = 17/113 (15%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-----------------T 68
           S PG P+ +  S     I + W+P       I  Y      R                  
Sbjct: 6   SGPGAPSTVRISKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYC 65

Query: 69  EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
               S  V A                   I   N  G    ++        + 
Sbjct: 66  GLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 48.5 bits (114), Expect = 2e-08
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--------------WQ 72
           PP  PN+     +  S+ + W    + G  I  + V YR   +                +
Sbjct: 2   PPTPPNVT--RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPK 59

Query: 73  SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
                 +    ++T LK    Y+  I  V S  ++K S T
Sbjct: 60  WNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNT 99

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 2e-08
 Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPS---YDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE 82
            PP         +    + + W+      D  +    + + YR    D       +    
Sbjct: 9   DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTA 68

Query: 83  FTLTQLKCGTHYKINIKLVNSIGE--SKPSKTIAASTKGED 121
            T+T    G  Y I +   ++     S  S    A+   E+
Sbjct: 69  HTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPWTEE 109

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.6 bits (112), Expect = 2e-08
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 32  NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKC 90
            I     T +S ++ W P       +  Y VSY          V VD       L +L  
Sbjct: 6   GISFSDITENSATVSWTPPRS---RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVP 62

Query: 91  GTHYKINIKLVNSIGESKPSKTIA 114
           G  Y +NI  V    ES+P   I 
Sbjct: 63  GVDYNVNIISVKGFEESEPISGIL 86

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 48.1 bits (113), Expect = 2e-08
 Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 3/92 (3%)

Query: 24  ILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY--- 80
           +   P  P +   +       I W+   D  + I HY + +              +    
Sbjct: 2   VQDVPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
               + Q+    +Y   +   N IG S PS  
Sbjct: 62  DSSFVVQMSPWANYTFRVIAFNKIGASPPSAH 93

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.7 bits (112), Expect = 3e-08
 Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 7/99 (7%)

Query: 26  SPPGVPNILLQ--STTTHSISILWKP----SYDGGAIITHYIVSYRDRTEDWQSVHVDAE 79
            PP    + ++        + + W P        G     Y +  +    +   +H    
Sbjct: 4   EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGH 63

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGE-SKPSKTIAAST 117
             +F +  L  G  Y +  +     G  S+ S+  +   
Sbjct: 64  QTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (113), Expect = 3e-08
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 20  YQVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAI-----ITHYIVSYRDRTEDWQSV 74
           ++V  LS P  P +     T HSI + W                 + +   D       V
Sbjct: 11  HKVVPLSKPHPPVVG--KVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGV 68

Query: 75  HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
                     +  L+  T YK  +K+ +  GE + S  ++ +T  E 
Sbjct: 69  IYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 3e-08
 Identities = 9/88 (10%), Positives = 29/88 (32%), Gaps = 3/88 (3%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRDRTEDWQSVHVDAEYR-E 82
            PP    +   +     +S+ W+  +  +       + + YR       +  +  + +  
Sbjct: 3   DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHH 62

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPS 110
             +     G  + + ++     G+ + S
Sbjct: 63  CVIHDAWSGLRHVVQLRAQEEFGQGEWS 90

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 6e-08
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREF 83
           +SPP      +   T  +I+I W+   +    IT + V       +      +  + R +
Sbjct: 2   VSPPR--RARVTDATETTITISWRTKTET---ITGFQVDAVPANGQTPIQRTIKPDVRSY 56

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           T+T L+ GT YKI +  +N    S P   I AST
Sbjct: 57  TITGLQPGTDYKIYLYTLNDNARSSPV-VIDAST 89

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 9e-08
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 6/98 (6%)

Query: 27  PPGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTED-----WQSVHVDAEY 80
            P  P+I      + +  + + +P   GG  I  Y   +R   E+     W      +  
Sbjct: 2   TPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 61

Query: 81  REFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
              T+  LK  T Y + +  +N  G  + S      T+
Sbjct: 62  GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 99

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (107), Expect = 2e-07
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 2/98 (2%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE--F 83
           S    P  L+   T   + + W P       +  Y++  R  ++ W+ +       E   
Sbjct: 6   SGLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETEL 65

Query: 84  TLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
            +  L     Y+  +        S PS T   ST G  
Sbjct: 66  LVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 2e-07
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 32  NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYREFTLTQLK 89
           ++ + + T  S+ I W         + +Y ++Y         Q   V       T++ LK
Sbjct: 2   DLEVVAATPTSLLISWDAPAV---TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLK 58

Query: 90  CGTHYKINIKLVNSIGESKPS 110
            G  Y I +  V   G+S  S
Sbjct: 59  PGVDYTITVYAVTGRGDSPAS 79

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 2e-07
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 22  VTILSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD---RTEDWQSVHVD 77
             +   P  P ++ L      S+ + W P  D  + IT +I+ Y D   +   W      
Sbjct: 11  APVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV 70

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
           +  +      L    +Y   +  VNSIG+S PS+          
Sbjct: 71  SGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-07
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQ 87
           P   ++     T  S+S  W P           +     +T   + +++  +     ++ 
Sbjct: 1   PAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKE-KTGPMKEINLAPDSSSVVVSG 59

Query: 88  LKCGTHYKINIKLVNSIGESKPSKTIA 114
           L   T Y++++  +     S+P++ + 
Sbjct: 60  LMVATKYEVSVYALKDTLTSRPAQGVV 86

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-07
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 7/95 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYRE 82
           +  P    +        SI I W+        ++ Y V+Y    +    +    D E   
Sbjct: 2   IDRPK--GLAFTDVDVDSIKIAWESPQG---QVSRYRVTYSSPEDGIHELFPAPDGEEDT 56

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
             L  L+ G+ Y +++  ++   ES+P     ++ 
Sbjct: 57  AELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 3e-07
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYRE 82
           +  P   N+   +TT +S+ + W+P       IT YI+ Y                   E
Sbjct: 1   IDAPS--NLRFLATTPNSLLVSWQPPRAR---ITGYIIKYEKPGSPPREVVPRPRPGVTE 55

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKP 109
            T+T L+ GT Y I +  + +  +S+P
Sbjct: 56  ATITGLEPGTEYTIYVIALKNNQKSEP 82

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 5e-07
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 5/87 (5%)

Query: 39  TTHSISILWKPSYDGGAI----ITHYIVSYRDRTEDWQSVHVDAEY-REFTLTQLKCGTH 93
           T  ++ + W        I    + +   S    T  WQ++       R   L  LK G  
Sbjct: 28  TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVT 87

Query: 94  YKINIKLVNSIGESKPSKTIAASTKGE 120
           Y+I ++   +  +   S++    T  E
Sbjct: 88  YEIKVRPYFNEFQGMDSESKTVRTTEE 114

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 6e-07
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR--DRTEDWQSVHVDAEYRE 82
           L  P    I ++  T  +  I W         I    ++Y   D   D  ++ +  +  +
Sbjct: 2   LDAPS--QIEVKDVTDTTALITWFKPLA---EIDGIELTYGIKDVPGDRTTIDLTEDENQ 56

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
           +++  LK  T Y++++        S P+K   
Sbjct: 57  YSIGNLKPDTEYEVSLISRRGDMSSNPAKETF 88

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 7e-07
 Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 22  VTILSPPGVP----NILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-------DRTED 70
           ++   PP +P    N+ + +    S+++ ++P YDG   I+ ++V  +       +    
Sbjct: 2   ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL 61

Query: 71  WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
              +  + + R   +  L   T Y   ++ VN +G S PS+ 
Sbjct: 62  IHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQP 103

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 1e-06
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 4/97 (4%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYD--GGAIITHYIVSYRDRTEDWQSVHVDAEYREFT 84
           P   P  ++ + T   + + W+        + +T Y V YR  +++   V      +   
Sbjct: 18  PSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT--NKTSA 75

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGED 121
              L     Y I +K     G+   S+ I        
Sbjct: 76  ELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-06
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
            P + ++     T  SI + W P      I     V             VD+    +T+T
Sbjct: 6   VPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVT 65

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            L+ G  Y I++  + + GES P+ T+   T
Sbjct: 66  GLEPGIDYDISVITLINGGESAPT-TLTQQT 95

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (100), Expect = 1e-06
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYD--GGAIITHYIVS-----YRDRTEDWQSVHVDA 78
           S P +  + +   TT S+ + W+         ++   + S        R    + + V  
Sbjct: 3   SRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPG 62

Query: 79  EYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
                 L  L+ GT Y + +  +    ++   +  A
Sbjct: 63  TRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTA 98

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.6 bits (99), Expect = 2e-06
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 7/95 (7%)

Query: 22  VTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAE 79
           + ++  P    IL++  +     + W P       +   ++ Y          +  +   
Sbjct: 1   IPVIDGPT--QILVRDVSDTVAFVEWTPPRA---KVDFILLKYGLVGGEGGKTTFRLQPP 55

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA 114
             ++++  L+ G+ Y+++I  V    ES  S T  
Sbjct: 56  LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQF 90

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 2e-06
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 26  SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQSVHVDAEYREFT 84
           S P +   +      +SI +      DGG+ I HY+V YR  +      + + +      
Sbjct: 2   SAPKLEGQM--GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVM 59

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
           L  L     Y++ +   N  G+SK +  +  + 
Sbjct: 60  LKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 6e-06
 Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY----R 81
              +   +  +    + + ++W+   +   +I  Y VSYR   ++   +    ++    R
Sbjct: 4   ADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALER 63

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTI 113
              L  L  G +  + I+  +  G    ++  
Sbjct: 64  GCRLRGLSPGNYS-VRIRATSLAGNGSWTEPT 94

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 40.8 bits (94), Expect = 7e-06
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 25  LSPPGVP-NILLQSTTTHSISILWKPSYDGGAIITH----YIVSYRDRTEDWQSVHVDAE 79
           L P  VP  + ++  +  ++ + W  + D    +      Y        E +++    A 
Sbjct: 4   LDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAH 63

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPS 110
            R F +  L+  T Y+  ++  ++   S+ S
Sbjct: 64  ARSFKIAPLETATMYEFKLQSFSAASASEFS 94

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 8e-06
 Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 28  PGVPNILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREF--T 84
           P   N+ ++S   + I + W         + T  + +Y  +  +W    ++  +     +
Sbjct: 2   PTPTNVTIESYNMNPI-VYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNIS 60

Query: 85  LTQLKCGTHYKINIKLVNSIGESKPSKT 112
                      + +K      ES  +K+
Sbjct: 61  DHVGDPSNSLWVRVKARVGQKESAYAKS 88

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 1e-05
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 26  SPPGVP-NILLQSTTTHSISILWKPSYDGGAI-ITHYIVSYRD--RTEDWQSVHVDAEYR 81
           SP   P   +  + T H++++ W      G   IT YIV  RD       ++   +    
Sbjct: 1   SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILEN 60

Query: 82  EFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTKGEDQTD 124
           EFT++ L     Y+  +   N+ G   P    + +    D  +
Sbjct: 61  EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 103

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (90), Expect = 3e-05
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 8/98 (8%)

Query: 28  PGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-------WQSVHVDAE 79
           P  P  +     ++    + W    +    IT Y V Y    +D        + +  + +
Sbjct: 3   PSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPK 62

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAST 117
            R   +  L+    Y+  +K  N  G     + I    
Sbjct: 63  NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA 100

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 37.9 bits (87), Expect = 8e-05
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 27  PPGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTL 85
            P  P N+   + TT SI++ W  S D   +  + + +                    T+
Sbjct: 3   APTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALATTVTG-------TTATI 55

Query: 86  TQLKCGTHYKINIKLVNSIG-ESKPSKTIAAST 117
           + L   T Y   +K  ++ G  S  S  ++  T
Sbjct: 56  SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 8e-05
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 4/88 (4%)

Query: 28  PGVP-NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLT 86
           P  P  +   + T     + WKP  +    +  Y +                   ++ L 
Sbjct: 1   PDGPTQLRALNLTEGFAVLHWKPPQN---PVDTYDIQVTAPGAPPLQAETPGSAVDYPLH 57

Query: 87  QLKCGTHYKINIKLVNSIGESKPSKTIA 114
            L   T+Y   ++ +     + P+    
Sbjct: 58  DLVLHTNYTATVRGLRGPNLTSPASITF 85

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 1e-04
 Identities = 13/118 (11%), Positives = 30/118 (25%), Gaps = 31/118 (26%)

Query: 32  NILLQSTTTHSISILW-KPSYDGGAIITHYIVSYRDRTEDWQSVH--------------- 75
                 T+   I + W          +  +++ Y++      +                 
Sbjct: 7   KFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVD 66

Query: 76  ----------VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP-----SKTIAASTK 118
                         +  + +  LK  T Y I +K + +  + +      S  I   T 
Sbjct: 67  IDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 3  GNYTCLADNIFGKDDIYYQVTILSPPGVP 31
          G YT L +N  G       +T++  P  P
Sbjct: 69 GCYTLLVENKLGSRQAQVNLTVVDKPDPP 97

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 7/88 (7%)

Query: 25  LSPPGVPNILLQSTTTHSISIL-WKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYRE- 82
           ++PP +      +    S S+           I   + + YR  T  W+    +      
Sbjct: 6   MAPPSLQ----VTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAH 61

Query: 83  -FTLTQLKCGTHYKINIKLVNSIGESKP 109
              L  L+  T Y   +++  S      
Sbjct: 62  SMALPALEPSTRYWARVRVRTSRTGYNG 89

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 5e-04
 Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 4/95 (4%)

Query: 21  QVTILSPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEY 80
           +V +L  P      L   + H +     P          Y V             V+   
Sbjct: 1   EVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILE 60

Query: 81  R--EFTLTQLKCGTHYKINI--KLVNSIGESKPSK 111
              E  L+ L+  T Y   +  ++         S 
Sbjct: 61  GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSA 95

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 9e-04
 Identities = 17/110 (15%), Positives = 30/110 (27%), Gaps = 15/110 (13%)

Query: 27  PPGVPNILLQSTTTHSISILWKPSYDGG------AIITHYIVSYRD---RTEDWQSVHVD 77
            P  P  L  ST      + W  +               + V Y+      ED   +  +
Sbjct: 5   QPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSN 64

Query: 78  AEYREFTLTQLKCGTHYKINIKLVNSIGE------SKPSKTIAASTKGED 121
                     L   + Y   ++   + G       SK S  +   ++  D
Sbjct: 65  TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 114

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.001
 Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 7/90 (7%)

Query: 28  PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-----SVHVDAEYRE 82
           P  P++  ++   H I + W P        T Y V+      +            +    
Sbjct: 5   PSPPSVWFEAEFFHHI-LHWTPIPQQSES-TCYEVALLRYGIESWNSISQCSQTLSYDLT 62

Query: 83  FTLTQLKCGTHYKINIKLVNSIGESKPSKT 112
                L     Y+  ++ V+    S+ + T
Sbjct: 63  AVTLDLYHSNGYRARVRAVDGSRHSQWTVT 92

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 27  PPGVPNIL--LQSTTTHSISILWKPSYDGGAIITH-----YIVSYRDRTEDWQSVHVDAE 79
           PP  P  +      T  +I + W+P       +++         Y       + +   A+
Sbjct: 10  PPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPTAD 69

Query: 80  YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAASTK 118
                L +L+      + ++ +++ GES  S   A   +
Sbjct: 70  STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPE 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	197
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.73
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.73
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	99.7
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.69
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	99.69
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.69
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	99.68
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	99.68
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	99.68
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.67
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	99.67
d2crza1	97	Fibronectin type-III domain containing protein 3a,	99.66
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.66
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.66
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	99.64
d2crma1	107	Fibronectin type-III domain containing protein 3a,	99.64
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	99.63
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	99.61
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	99.61
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.59
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.59
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.58
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.57
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.56
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.55
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	99.54
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.54
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.53
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.52
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	99.52
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	99.52
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.52
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	99.52
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	99.51
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	99.51
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	99.5
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.5
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	99.5
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	99.5
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	99.5
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.5
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	99.48
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.47
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.47
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.46
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.46
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	99.46
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.45
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	99.44
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.44
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	99.43
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.42
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.42
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	99.41
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	99.41
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.4
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.39
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	99.39
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	99.38
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.37
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.37
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.36
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	99.35
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	99.34
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	99.33
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	99.31
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	99.31
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	99.29
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	99.24
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	99.17
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.13
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	99.12
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	98.95
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	98.89
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	98.89
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.64
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	98.56
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	98.55
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.53
d2crza1	97	Fibronectin type-III domain containing protein 3a,	98.52
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	98.52
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.5
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.5
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	98.49
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	98.48
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	98.46
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	98.45
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	98.44
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	98.44
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.41
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.39
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	98.37
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	98.36
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	98.33
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.31
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	98.3
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	98.3
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.3
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	98.29
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.28
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.26
d2crma1	107	Fibronectin type-III domain containing protein 3a,	98.26
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.26
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	98.25
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	98.24
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	98.24
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	98.22
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.21
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.21
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.21
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	98.2
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	98.19
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	98.18
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.18
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	98.18
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.17
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	98.15
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	98.13
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	98.13
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	98.1
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.1
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.1
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	98.1
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.09
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	98.08
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	98.07
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.07
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.05
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	98.04
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.04
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.03
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.03
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	97.99
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	97.99
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	97.96
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	97.94
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	97.92
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	97.91
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	97.91
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	97.88
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	97.87
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	97.85
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	97.84
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	97.74
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	97.68
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	97.66
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	97.65
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	97.58
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	97.58
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	97.5
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	97.43
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	97.39
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	97.28
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	97.27
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	97.26
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	97.13
d2hyma1	109	Interferon-alpha/beta receptor beta chain {Human (	96.38
d1olza1	92	Semaphorin 4d Ig-like domain {Human (Homo sapiens)	96.37
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	96.01
d2c4fu1	116	Extracellular region of human tissue factor {Human	96.0
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	95.84
d1iray2	103	Type-1 interleukin-1 receptor {Human (Homo sapiens	95.63
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	95.6
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	95.36
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	95.34
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	95.03
d1fhga_	102	Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103	94.93
d1koaa1	97	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	94.56
d1g1ca_	98	Titin {Human (Homo sapiens), different modules [Ta	94.47
d2hfta1	106	Extracellular region of human tissue factor {Human	94.38
d1f2qa2	89	IgE high affinity receptor alpha subunit {Human (H	94.32
d1gsma1	90	Mucosal addressin cell adhesion molecule-1 (MADCAM	94.04
d1a21a1	103	Extracellular region of human tissue factor {Rabbi	93.88
d3b5ha1	101	Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 960	92.85
d1tnna_	91	Titin {Human (Homo sapiens), different modules [Ta	92.84
d1biha3	97	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	91.88
d1wiua_	93	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	91.44
d1cs6a3	91	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	90.3
d1axib1	99	Growth hormone receptor {Human (Homo sapiens) [Tax	90.28
d3dara1	97	Fibroblast growth factor receptor, FGFR {Human (Ho	89.92
d1qz1a3	100	Neural cell adhesion molecule (NCAM) {Rat (Rattus	89.88
d1rhfa1	91	Tyrosine-protein kinase receptor tyro3, N-terminal	89.79
d1epfa1	97	Neural cell adhesion molecule (NCAM) {Rat (Rattus	89.66
d1nbqa2	104	Junction adhesion molecule, JAM, C-terminal domain	89.11
d2c4fu1	116	Extracellular region of human tissue factor {Human	88.82
d2fdbp2	109	Fibroblast growth factor receptor, FGFR {Human (Ho	88.52
d1gl4b_	89	Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId:	88.5
d1biha4	89	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	88.44
d2c9aa1	96	Receptor-type tyrosine-protein phosphatase mu {Hum	88.09
d1vcaa2	90	Vascular cell adhesion molecule-1 (VCAM-1) {Human	87.53
d1cs6a4	89	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	87.47
d1l6za2	96	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-t	86.09
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	85.46
d1ucta1	99	Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sa	84.62
d1olla1	95	Ligand binding domain of NK receptor NKp46 {Human	84.58
d1x44a1	90	Myosin-binding protein C, slow-type {Human (Homo s	83.11
d1cs6a2	105	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	82.5
d1biha1	94	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	81.65
d1pd6a_	94	Cardiac myosin binding protein C, different domain	80.61
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	80.12

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.9e-18  Score=103.08  Aligned_cols=98  Identities=20%  Similarity=0.437  Sum_probs=78.3

Q ss_pred             EEEEecCCCCCCE---EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE--eCCcccEEEECCCCCCCEE
Q psy9139          20 YQVTILSPPGVPN---ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYREFTLTQLKCGTHY   94 (197)
Q Consensus        20 ~~~~~~~~P~~p~---~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~~~y   94 (197)
                      +.+.++..|.+|.   +.+...+.+++.|.|.+|.+++++|.+|.|+++.....|....  .....+.++|.+|.|++.|
T Consensus         3 ~~l~v~~~P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   82 (108)
T d1wf5a1           3 AHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSY   82 (108)
T ss_dssp             CCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEESCCTTCEE
T ss_pred             cccEEecCCCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCceEEeeeecCCccEEEECCCCCCCEE
Confidence            4456677777765   4455677889999999998888899999999997666666554  3455678999999999999


Q ss_pred             EEEEEEEcCCcCCCCCCceEeec
Q psy9139          95 KINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        95 ~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      .|+|.|.|..|.|.++......+
T Consensus        83 ~frV~A~N~~G~s~~S~~~~~~t  105 (108)
T d1wf5a1          83 QFRLCAVNDVGKGQFSKDTERVS  105 (108)
T ss_dssp             EEEEEEEESSCEEEECCCCSCEE
T ss_pred             EEEEEEEcCCcCCCCcCCcCCEE
Confidence            99999999999988877655444

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.4e-17  Score=96.07  Aligned_cols=89  Identities=25%  Similarity=0.440  Sum_probs=76.1

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcE-EEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQ-SVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      |++|. +.+...+.+++.|.|.++.+++.+|.+|.|+|+...+.|. ...+....+.+++.+|.|++.|.|+|.|.|..|
T Consensus         1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G   80 (93)
T d2vkwa2           1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQG   80 (93)
T ss_dssp             CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeeeccCCceEEEEeccccceEEEEEEEEEcCCC
Confidence            78887 8888899999999999999888999999999996555544 345677788999999999999999999999999


Q ss_pred             CCCCCCceEeec
Q psy9139         106 ESKPSKTIAAST  117 (197)
Q Consensus       106 ~~~~s~~~~~~t  117 (197)
                      .|+++. +.++|
T Consensus        81 ~s~ps~-~~~~T   91 (93)
T d2vkwa2          81 KSKAAH-FVFRT   91 (93)
T ss_dssp             ECCCEE-EEEEC
T ss_pred             CcCCEe-EEEEe
Confidence            999874 55555

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=7.4e-17  Score=96.38  Aligned_cols=94  Identities=23%  Similarity=0.335  Sum_probs=78.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .+|.+|. +.+...+.+++.|.|.+|.+.++++.+|.|+|+.. ...+.........+.++|.+|+|++.|.|+|+|.|.
T Consensus         2 a~P~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~   81 (98)
T d1x5la1           2 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTS   81 (98)
T ss_dssp             CCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEET
T ss_pred             cCCCCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEecCCceEEEECCCCCCCEEEEEEEEEcC
Confidence            5677776 88899999999999999887778899999999843 333333344556788999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.|.++..+.+.|..
T Consensus        82 ~G~g~~S~~v~~~T~~   97 (98)
T d1x5la1          82 AGCGRFSQAMEVETGK   97 (98)
T ss_dssp             TEECCCCCCEEEECCC
T ss_pred             CCCcCCCCCEEEEcCC
Confidence            9999999999888853

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.8e-17  Score=102.34  Aligned_cols=97  Identities=24%  Similarity=0.432  Sum_probs=77.9

Q ss_pred             EEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          22 VTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        22 ~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      +.+...|.+|. +.+...+.+++.|.|.++.+++.++.+|.|+++..  ...|..+......+.++|.+|+|++.|.|+|
T Consensus        10 ~~~~~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   89 (117)
T d1uema_          10 YDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMV   89 (117)
T ss_dssp             CCSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEE
T ss_pred             ceeCccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEeccccccccceECCCCCCCEEEEEE
Confidence            34567888887 88888899999999999888888899999998743  3456665555566789999999999999999


Q ss_pred             EEEcCCcCCCCCCce-EeecC
Q psy9139          99 KLVNSIGESKPSKTI-AASTK  118 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~-~~~t~  118 (197)
                      +|.|..|.+.++... .++|.
T Consensus        90 ~A~N~~G~s~~S~~s~~v~t~  110 (117)
T d1uema_          90 RAINPQGLSDPSPMSDPVRTQ  110 (117)
T ss_dssp             EEEETTEEEEECCCCCCEECC
T ss_pred             EEEeCCcCCCCcCCCcCEEeC
Confidence            999999998877653 24443

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=2.1e-16  Score=94.35  Aligned_cols=86  Identities=26%  Similarity=0.488  Sum_probs=71.6

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ||.+|. +.+...+.+++.|.|.+|. +++.+|.+|.|+++. ....|.... .....+.+++.+|.+++.|.|+|.|.|
T Consensus         1 PP~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~~~Y~frV~A~n   80 (98)
T d1x5ya1           1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVN   80 (98)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEE
T ss_pred             CCCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeeeecCceeEEEECCCcCCeEEEEEEEEEC
Confidence            688997 8888899999999999876 455689999999984 556776543 344567899999999999999999999


Q ss_pred             CCcCCCCCCc
Q psy9139         103 SIGESKPSKT  112 (197)
Q Consensus       103 ~~g~~~~s~~  112 (197)
                      ..|.|.++..
T Consensus        81 ~~G~s~~s~~   90 (98)
T d1x5ya1          81 IAGRSEPATL   90 (98)
T ss_dssp             TTEECCCCCC
T ss_pred             CCcCCCCcCC
Confidence            9999887643

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=3.2e-16  Score=95.20  Aligned_cols=87  Identities=29%  Similarity=0.599  Sum_probs=72.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE--eCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH--VDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+|.+|. +.+...+.+++.|.|.++.+++.+|.+|.|+|+.  ....|....  +......+++.+|.|++.|.|+|.|
T Consensus         9 ~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   88 (108)
T d1x4za1           9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRA   88 (108)
T ss_dssp             CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEE
T ss_pred             CCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEeecCCccEEEECCCCCCCEEEEEEEE
Confidence            5788887 7788889999999999888888889999999983  344565443  4566778999999999999999999


Q ss_pred             EcCCcCCCCCCc
Q psy9139         101 VNSIGESKPSKT  112 (197)
Q Consensus       101 ~~~~g~~~~s~~  112 (197)
                      .|..|.+.+|..
T Consensus        89 ~N~~G~s~~S~p  100 (108)
T d1x4za1          89 LNMLGESEPSAP  100 (108)
T ss_dssp             EETTEECCCCCC
T ss_pred             ECCCcCCCCCCC
Confidence            999999877653

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.7e-16  Score=95.96  Aligned_cols=95  Identities=21%  Similarity=0.357  Sum_probs=79.0

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCC-CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTE-DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..+|++|. +.+...+.+++.|.|.++.+++.++.+|.++++.... .+...........+.+.+|.|++.|.|+|+|.|
T Consensus         8 ~~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~N   87 (105)
T d1x3da1           8 SCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARN   87 (105)
T ss_dssp             CSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEE
T ss_pred             CCCCcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEecCCccEEEecCCcCCcEEEEEEEEEC
Confidence            46788887 8888899999999999998888899999999984333 233333455677899999999999999999999


Q ss_pred             CCcCCCCCCceEeecCC
Q psy9139         103 SIGESKPSKTIAASTKG  119 (197)
Q Consensus       103 ~~g~~~~s~~~~~~t~~  119 (197)
                      ..|.|.+|..+.+.|.+
T Consensus        88 ~~G~s~~S~~~~~~T~g  104 (105)
T d1x3da1          88 DYGTSGFSEEVLYYTSG  104 (105)
T ss_dssp             SSCBCCCCCCEEEECSC
T ss_pred             CCeEcCCCCcEEEECCC
Confidence            99999999988888754

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.2e-16  Score=93.41  Aligned_cols=91  Identities=14%  Similarity=0.217  Sum_probs=73.6

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      |++|. +.+...+.+++.|.|.++.+.++++.+|.|+++.....+.... ....+.++|.+|.|++.|.|+|+|.|..|.
T Consensus         1 P~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   79 (93)
T d1x4xa1           1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICY-CGPGLSYEIKGLSPATTYYCRVQALSVVGA   79 (93)
T ss_dssp             CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEE-EESCSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred             CcCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEee-cCCccEEEEcccceeeEEEEEEEEEECCcC
Confidence            44554 5666778899999999988777889999999985444443333 445678999999999999999999999999


Q ss_pred             CCCCCceEeecCC
Q psy9139         107 SKPSKTIAASTKG  119 (197)
Q Consensus       107 ~~~s~~~~~~t~~  119 (197)
                      |.++..+.+.|++
T Consensus        80 s~~S~~~~~~Tpp   92 (93)
T d1x4xa1          80 GPFSEVVACVTPP   92 (93)
T ss_dssp             CCBCCCEEEECCC
T ss_pred             cCCCCcEEEEeCC
Confidence            9999888888864

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.3e-16  Score=92.78  Aligned_cols=85  Identities=20%  Similarity=0.391  Sum_probs=73.6

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      |++|.+.+.....+++.|.|.+|.+.++++.+|.|+|+. ....|..........+++|.+|.|++.|.|+|.|.|..|.
T Consensus         1 P~~P~~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   80 (94)
T d2dn7a1           1 PGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGL   80 (94)
T ss_dssp             CCCCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred             CCCCcEeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcCCcC
Confidence            678886677788999999999998777889999999984 5566777777788889999999999999999999999999


Q ss_pred             CCCCCc
Q psy9139         107 SKPSKT  112 (197)
Q Consensus       107 ~~~s~~  112 (197)
                      |.++..
T Consensus        81 g~~s~~   86 (94)
T d2dn7a1          81 GEEFEK   86 (94)
T ss_dssp             EEEEEE
T ss_pred             CCCccE
Confidence            887653

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=9.4e-16  Score=91.99  Aligned_cols=94  Identities=21%  Similarity=0.286  Sum_probs=74.8

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEe----CCcccEEEECCCCCCCEEEEEEE
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHV----DAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~----~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      +.|++|.+.......+++.|.|.+|. +++.+|.+|.|+|+. ....|.....    ......++|.+|.|++.|.|+|+
T Consensus         1 DvP~~P~~~~~~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~   80 (101)
T d2haza1           1 DTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLA   80 (101)
T ss_dssp             CCCCCCEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEE
T ss_pred             CcCcCCccCEEEeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEE
Confidence            46888985555677889999999875 556689999999994 4445554331    23456799999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecCC
Q psy9139         100 LVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |.|..|.|.++....+.|.+
T Consensus        81 A~N~~G~g~~S~~~~~~T~P  100 (101)
T d2haza1          81 ALNGKGLGEISAASEFKTQP  100 (101)
T ss_dssp             EEETTEECCCCCCEEEECCC
T ss_pred             EEeCCcCcCCCCceeEEeCC
Confidence            99999999999888887754

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.3e-16  Score=93.69  Aligned_cols=93  Identities=22%  Similarity=0.336  Sum_probs=76.0

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      |+.+|.+.+...+.+++.|.|.+|.+.++.+.+|.++++. ....|.........+.+++.+|.|++.|.|+|+|.|..|
T Consensus         1 P~~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   80 (95)
T d2djsa1           1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAG   80 (95)
T ss_dssp             CCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSC
T ss_pred             CCCCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeecCCccEEEEeecCCccEEEEEEEEEcCCC
Confidence            3455568888999999999999988777889999999984 333333333455667899999999999999999999999


Q ss_pred             CCCCCCceEeecCC
Q psy9139         106 ESKPSKTIAASTKG  119 (197)
Q Consensus       106 ~~~~s~~~~~~t~~  119 (197)
                      .|.+|..+.++|.+
T Consensus        81 ~g~~S~~~~~~T~~   94 (95)
T d2djsa1          81 YGKFSGKMCFQTLT   94 (95)
T ss_dssp             EEEECCCEEEECCC
T ss_pred             CCCCCCCEEEEeCC
Confidence            99999888888754

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.8e-16  Score=92.50  Aligned_cols=82  Identities=23%  Similarity=0.380  Sum_probs=67.4

Q ss_pred             eecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceE
Q psy9139          37 STTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA  114 (197)
Q Consensus        37 ~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~  114 (197)
                      ....+++.|.|.+|. +++.+|..|+|+++. ....|..+. ....+.++|.+|.|++.|.|+|+|.|..|.+.++....
T Consensus        13 ~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~   91 (97)
T d2crza1          13 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-QGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCD   91 (97)
T ss_dssp             CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-EESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEE
T ss_pred             eeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee-cCCceEEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCe
Confidence            356789999999876 555689999999985 445666554 44567899999999999999999999999999998888


Q ss_pred             eecCC
Q psy9139         115 ASTKG  119 (197)
Q Consensus       115 ~~t~~  119 (197)
                      +.|.+
T Consensus        92 ~~T~p   96 (97)
T d2crza1          92 ITTAP   96 (97)
T ss_dssp             EECCC
T ss_pred             EEeCc
Confidence            87754

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.66  E-value=4.7e-16  Score=93.18  Aligned_cols=88  Identities=20%  Similarity=0.374  Sum_probs=69.5

Q ss_pred             ecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCC-cEEEE-eCCcccEEEECCCCCCCEEEEEEE
Q psy9139          24 ILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TED-WQSVH-VDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        24 ~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~-~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      |+++|.+|. +.+ ....+++.|+|.++.++++++.+|.|+++.. ... +.... .......+.+.+|.|++.|.|+|+
T Consensus         2 V~dvP~~P~~~~v-~~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~   80 (100)
T d1cfba1           2 VQDVPNAPKLTGI-TCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVI   80 (100)
T ss_dssp             CCCCCCCCEEEEE-EECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEEE
T ss_pred             cccCCCcCcCcEE-EEcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEEE
Confidence            678999998 665 4567899999999988888999999999842 222 33322 223455688889999999999999


Q ss_pred             EEcCCcCCCCCCc
Q psy9139         100 LVNSIGESKPSKT  112 (197)
Q Consensus       100 a~~~~g~~~~s~~  112 (197)
                      |.|..|.|.+|..
T Consensus        81 A~n~~G~g~~S~~   93 (100)
T d1cfba1          81 AFNKIGASPPSAH   93 (100)
T ss_dssp             EEETTEECCCCCC
T ss_pred             EEeCCcCCCCcCC
Confidence            9999999988764

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.3e-16  Score=93.46  Aligned_cols=92  Identities=23%  Similarity=0.370  Sum_probs=75.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|+|.+|.+.++++.+|.|.|+. ....|..+.  ....+++|.+|.|++.|.|+|+|.|.
T Consensus         9 ~vP~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~   86 (103)
T d1x5ga1           9 QLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVD--VSSHSYTINGLKKYTEYSFRVVAYNK   86 (103)
T ss_dssp             SCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEE--ECSSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCcccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEe--ccccEEecCCCCCCCEEEEEEEEEcC
Confidence            3577776 8899999999999999988777889999999984 334444333  34568999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.|.++..+.++|..
T Consensus        87 ~G~g~~S~~v~v~T~e  102 (103)
T d1x5ga1          87 HGPGVSTPDVAVRTLS  102 (103)
T ss_dssp             SCCCCBCCCCCEECCC
T ss_pred             CcCcCCCCCEEEEcCC
Confidence            9999988888887754

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.7e-15  Score=89.99  Aligned_cols=94  Identities=23%  Similarity=0.388  Sum_probs=76.9

Q ss_pred             CCCCCCE-EEEE--eecCCeEEEEeeeCCCCCccccEEEEEEEe----CCCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQ--STTTHSISILWKPSYDGGAIITHYIVSYRD----RTEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~--~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~----~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .|+.+|. +.+.  ..+.+++.|.|.+|.+.++++.+|.+.|+.    ....|.........+.++|.+|.|++.|.|+|
T Consensus        10 ~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   89 (111)
T d1x5ka1          10 VPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKI   89 (111)
T ss_dssp             CCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCCSSSEEEEEE
T ss_pred             CCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCCCCCEEEEEE
Confidence            3446776 5544  456789999999988778889999999982    23346666677788899999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecCC
Q psy9139          99 KLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      +|.|..|.|.+|..+.++|..
T Consensus        90 ~A~n~~G~g~~S~~v~~~T~~  110 (111)
T d1x5ka1          90 QARNSKGMGPMSEAVQFRTPK  110 (111)
T ss_dssp             EEECSSCBCCCCCCEEEECCC
T ss_pred             EEEcCCCCcCCCCCEEEECCC
Confidence            999999999999988888864

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.2e-15  Score=90.57  Aligned_cols=95  Identities=18%  Similarity=0.216  Sum_probs=78.3

Q ss_pred             cCCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEE-EeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          25 LSPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSV-HVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        25 ~~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~-~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..+|.+|. +.+...+.+++.|+|.+|. ++++.+.+|.|.++. ....+... ......+.++|.+|.|++.|.|+|.|
T Consensus         8 ~~~P~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV~A   87 (107)
T d1x5fa1           8 GPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMA   87 (107)
T ss_dssp             CCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCcCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEEeCCCccEEEecCCCCCCEEEEEEEE
Confidence            36788897 8899999999999999875 566788999999984 33333333 34566788999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.|.++..+.+.|.+
T Consensus        88 ~n~~G~g~~S~~i~v~T~~  106 (107)
T d1x5fa1          88 QNKHGSGESSAPLRVETQP  106 (107)
T ss_dssp             ECSSCEEEECCCEEEECCC
T ss_pred             EeCCCCcCCCCCEEEECCC
Confidence            9999999999888888764

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=8.6e-16  Score=91.28  Aligned_cols=92  Identities=23%  Similarity=0.324  Sum_probs=73.9

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      |.+|. +.+...+.+++.|.|.+|. +++..+.+|.++++. ....|...........++|.+|+|++.|.|+|+|.|..
T Consensus         1 P~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~   80 (96)
T d1x5xa1           1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSE   80 (96)
T ss_dssp             CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             CccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcCC
Confidence            45565 6777789999999999876 444568888888874 34455555556667889999999999999999999999


Q ss_pred             cCCCCCCceEeecCC
Q psy9139         105 GESKPSKTIAASTKG  119 (197)
Q Consensus       105 g~~~~s~~~~~~t~~  119 (197)
                      |.|.++..+.+.|.+
T Consensus        81 G~s~~S~~~~~~T~p   95 (96)
T d1x5xa1          81 GKSNPSEVVEFTTCP   95 (96)
T ss_dssp             CEEEECCCEEEECCC
T ss_pred             cEeCCCCCEEEEeCc
Confidence            999999888888754

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3e-15  Score=90.70  Aligned_cols=93  Identities=25%  Similarity=0.464  Sum_probs=72.6

Q ss_pred             CCCCCCE--EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN--ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~--~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      +.|++|.  ......+.+++.|.|.+|. +++.++..|.++++. ....|.........+.+.+.+|+|++.|.|+|+|.
T Consensus         9 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~   88 (107)
T d2crma1           9 DKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCI   88 (107)
T ss_dssp             CCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEE
T ss_pred             CCCcCCCCCEEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeecCCccEEEEeccCCCCEEEEEEEEE
Confidence            4577665  4445578899999999876 555678999999983 33333344446667889999999999999999999


Q ss_pred             cCCcCCCCCCceEeecC
Q psy9139         102 NSIGESKPSKTIAASTK  118 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~  118 (197)
                      |..|.|.+|+.+.++|+
T Consensus        89 n~~G~s~~S~~v~v~Tp  105 (107)
T d2crma1          89 SDGGQSAVSESLLVQTP  105 (107)
T ss_dssp             ETTEECCCCCCCCCCCC
T ss_pred             CCCcCcCCCCcEEEECC
Confidence            99999999988777664

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=9.6e-16  Score=92.14  Aligned_cols=91  Identities=22%  Similarity=0.339  Sum_probs=73.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..|.+|. +.+...+.+++.|+|.++.  +..+.+|.|+|+... ..+.... ....+.++|.+|+|++.|.|+|.|.|.
T Consensus         9 ~vP~~P~~~~~~~~~~~si~l~W~~p~--~~~i~~Y~i~y~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~   85 (102)
T d1x5za1           9 GVPGQPLNFKAEPESETSILLSWTPPR--SDTIANYELVYKDGEHGEEQRIT-IEPGTSYRLQGLKPNSLYYFRLAARSP   85 (102)
T ss_dssp             CCCCCCEEEEEECSSSSEEEEEEECCS--CCCCCEEEECBEESSSCCCBCCE-ECSSSEEEEECCCTTCEEEECEEEECS
T ss_pred             CCCcCCCCeEEEEccCCEEEEEEECCC--CCCccceEEEEEeCCCCceEEEE-cCCcCEEEECCCCCCCEEEEEEEEEcC
Confidence            4677887 8888899999999999986  346899999998533 3333222 334568999999999999999999999


Q ss_pred             CcCCCCCCceEeecCC
Q psy9139         104 IGESKPSKTIAASTKG  119 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~~  119 (197)
                      .|.|.++..+.++|..
T Consensus        86 ~G~g~~S~~v~~~T~e  101 (102)
T d1x5za1          86 QGLGASTAEISARTMQ  101 (102)
T ss_dssp             SCEEEECCCEEEECCC
T ss_pred             CCEeCCCCCEEEEcCC
Confidence            9999998888888754

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.8e-15  Score=93.17  Aligned_cols=94  Identities=24%  Similarity=0.385  Sum_probs=76.2

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcE-EEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQ-SVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~-~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..|++|. +.+...+.+++.|.|.+|.+.++++.+|.|+|+.  ....+. ..........+++.+|.|++.|.|+|.|.
T Consensus        19 ~~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   98 (117)
T d1wfoa1          19 DVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQ   98 (117)
T ss_dssp             CCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEE
T ss_pred             CCCcCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEecCCceEEEEECCCCCCCEEEEEEEEE
Confidence            5688887 8888889999999999988767789999999983  222232 23346677889999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCC
Q psy9139         102 NSIGESKPSKTIAASTKG  119 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~  119 (197)
                      |..|.|.++..+.++|..
T Consensus        99 n~~G~g~~S~~~~~tT~e  116 (117)
T d1wfoa1          99 TRKGWGEAAEALVVTTEK  116 (117)
T ss_dssp             CSSCEEEEEEEEEECCSS
T ss_pred             CCCcCCCCcCCEEEECCC
Confidence            999999888777777643

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=9.9e-15  Score=86.14  Aligned_cols=90  Identities=16%  Similarity=0.204  Sum_probs=73.5

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +|.+|. +++...+.+++.|+|.++. +.++.+..|.|.+...+..+....   ..+.++|.+|.|++.|.|+|+|.|..
T Consensus         2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~~~~~~---~~t~~~i~~L~p~t~Y~~rV~A~n~~   78 (94)
T d1x5aa1           2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMV---LEPRVLLTKLQPDTTYIVRVRTLTPL   78 (94)
T ss_dssp             CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCEEEEEE---SSSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCceEEEee---ccCEEEECCCCCCCEEEEEEEEEcCC
Confidence            566675 9999999999999999874 444556789999986555444332   35689999999999999999999999


Q ss_pred             cCCCCCCceEeecCC
Q psy9139         105 GESKPSKTIAASTKG  119 (197)
Q Consensus       105 g~~~~s~~~~~~t~~  119 (197)
                      |.|.+|..+.++|.+
T Consensus        79 G~g~~S~~~~~~T~P   93 (94)
T d1x5aa1          79 GPGPFSPDHEFRTSP   93 (94)
T ss_dssp             SCCCCCCCEEEECCC
T ss_pred             cCcCCCCCEEEEeCC
Confidence            999999988888854

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.8e-15  Score=91.02  Aligned_cols=93  Identities=20%  Similarity=0.281  Sum_probs=76.2

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEE--eCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVH--VDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      ..+.||.......+.+++.|.|.++.+.++++.+|.|+++...+.|....  +....+.++|.+|.|++.|.|+|+|.|.
T Consensus         6 s~~sPP~~~~~~~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~   85 (108)
T d1v5ja_           6 SGLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAG   85 (108)
T ss_dssp             CCCCCCEEEEEEECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEET
T ss_pred             CCCCcCCCeEEEEcCCEEEEEEEecccCCCceeEEEEEeeeeeeeeeeccccccceeeeEEEEeccCCcEEEEEEEEEeC
Confidence            45678883334567889999999988777789999999997777776543  5667789999999999999999999999


Q ss_pred             CcCCCCCCceEeecC
Q psy9139         104 IGESKPSKTIAASTK  118 (197)
Q Consensus       104 ~g~~~~s~~~~~~t~  118 (197)
                      .|.+.++..+.+.|.
T Consensus        86 ~g~s~~S~~~~~~T~  100 (108)
T d1v5ja_          86 SFVSDPSNTANVSTS  100 (108)
T ss_dssp             TEEEEECSCCCCCCS
T ss_pred             CCEeCCcCceEEECC
Confidence            999988877766653

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.2e-15  Score=91.18  Aligned_cols=87  Identities=21%  Similarity=0.345  Sum_probs=71.7

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      ..|++|. +.+...+.+++.|.|.++.+.++.+.+|.|+|+..  ...+..........++.|.+|.|++.|.|+|.|.|
T Consensus         9 ~vP~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   88 (106)
T d1wfna1           9 DVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMT   88 (106)
T ss_dssp             CSCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEEC
T ss_pred             CCCcCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEEecCCCeeEEEEccCCCCCEEEEEEEEEC
Confidence            5677776 88888999999999999887777899999999842  23344445567778999999999999999999999


Q ss_pred             CCcCCCCCCc
Q psy9139         103 SIGESKPSKT  112 (197)
Q Consensus       103 ~~g~~~~s~~  112 (197)
                      ..|.|.++..
T Consensus        89 ~~G~g~~s~~   98 (106)
T d1wfna1          89 SKGQGQVSAS   98 (106)
T ss_dssp             SSCEEEEEEE
T ss_pred             CCCCcCCcCC
Confidence            9998877654

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.6e-15  Score=90.07  Aligned_cols=92  Identities=25%  Similarity=0.499  Sum_probs=73.0

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe----CCCCcEE---EEeCCcccEEEECCCCCCCEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD----RTEDWQS---VHVDAEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~----~~~~~~~---~~~~~~~~~~~i~~L~p~~~y~~~   97 (197)
                      +.|++|. +.+...+.+++.|.|.++.+++.++..|.++++.    ....|..   .........+.|.+|.|++.|.|+
T Consensus         9 ~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~fr   88 (111)
T d1wisa1           9 ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFR   88 (111)
T ss_dssp             CCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCC
T ss_pred             CCCcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEE
Confidence            4578887 8888889999999999998888899999999972    1222222   234566778999999999999999


Q ss_pred             EEEEcCCcCCCCCCc-eEeec
Q psy9139          98 IKLVNSIGESKPSKT-IAAST  117 (197)
Q Consensus        98 v~a~~~~g~~~~s~~-~~~~t  117 (197)
                      |+|.|..|.|.+|.. ..++|
T Consensus        89 V~A~N~~G~s~~S~~s~~~~T  109 (111)
T d1wisa1          89 MRQVNIVGTSPPSQPSRKIQT  109 (111)
T ss_dssp             CEEECSSCBCCCCCCCCCEEC
T ss_pred             EEEEcCCcCCCCcCCCCCEEc
Confidence            999999999988764 33444

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.5e-14  Score=85.17  Aligned_cols=87  Identities=20%  Similarity=0.277  Sum_probs=71.4

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      ++|. +.+...+++++.|.|.+|.   +.+.+|.|.|+.. ...+...........+.+.+|.|++.|.|+|.|.|..|.
T Consensus         3 ~aP~n~~~~~~s~~si~l~W~~p~---~~~~~Y~i~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   79 (92)
T d1qg3a1           3 GAPQNPNAKAAGSRKIHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGE   79 (92)
T ss_dssp             CCCEEEEEEECSTTCEEEEEECCS---SCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEECSSCB
T ss_pred             CcCCCCEEEEccCCEEEEEEEecC---CCccceEEeeeeccccccEEEEecCCccEEEECCCCCCcEEEEEEEEEeCCcC
Confidence            4565 8888899999999999874   3568899999843 333334445566778999999999999999999999999


Q ss_pred             CCCCCceEeecC
Q psy9139         107 SKPSKTIAASTK  118 (197)
Q Consensus       107 ~~~s~~~~~~t~  118 (197)
                      |.+|..+.++|.
T Consensus        80 g~~S~~~~~~T~   91 (92)
T d1qg3a1          80 GPYSSLVSCRTH   91 (92)
T ss_dssp             CCCCCCEEEECC
T ss_pred             cCCCCCEEEEcC
Confidence            999999988875

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3e-15  Score=99.68  Aligned_cols=135  Identities=19%  Similarity=0.139  Sum_probs=70.7

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .|++|. +.+...+.+++.|.|.+|.+.++.+.+|.|+|+. ....+.     ..........+.+.+.|.+++.+.+..
T Consensus         2 ~Ps~P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~y~~~v~~~~~~   76 (196)
T d2dtge2           2 NPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSEL-----FELDYCLKGLKLPSRTWSPPFESEDSQ   76 (196)
T ss_dssp             CCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSC-----TTCSSSCSCCCCCC-------------
T ss_pred             cCcCCcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCce-----eEEeeEEeccccceeEEEEEEEEEcCC
Confidence            588998 8899999999999999998777789999999883 222221     111112234577889999999998877


Q ss_pred             cCCCCCCceEeecCCC-----------C-------------CCCeeecCC--------------------CCCcccccce
Q psy9139         105 GESKPSKTIAASTKGE-----------D-------------QTDWINIPL--------------------SNLDEALEMP  140 (197)
Q Consensus       105 g~~~~s~~~~~~t~~~-----------~-------------~~~w~~~~~--------------------~~~~~~~~~~  140 (197)
                      +.+.............           +             ...|.....                    ..........
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (196)
T d2dtge2          77 KHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKES  156 (196)
T ss_dssp             -------------------------------------------------------------------CCSCSCEECSCSE
T ss_pred             ccccCcCCccceecCCCCccccccccCCcCcEEEeccCCceeecccCcCCCccceEEEEEEeecCCCccEEEEeccceEE
Confidence            6654332211111000           0             111110000                    0000023567


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         141 LVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       141 ~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      ++|.+|+|++.|.|+|+|+|..|.+.
T Consensus       157 ~~i~~L~p~t~Y~~~V~A~n~~~~~~  182 (196)
T d2dtge2         157 LVISGLRHFTGYRIELQACNQDTPEE  182 (196)
T ss_dssp             EEECSSCSSCEEEECCEEESCSSSSC
T ss_pred             EEECCCCCCCEEEEEEEEEECCCCCC
Confidence            99999999999999999999999886

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.58  E-value=2e-14  Score=85.04  Aligned_cols=85  Identities=20%  Similarity=0.389  Sum_probs=68.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe--CCCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD--RTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~--~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .|+.+|. +.+...+.+++.|.|++|. ..+..|.+|.|.|+.  ....|.... .....+++.|.+|+|++.|.|+|.|
T Consensus         5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   84 (95)
T d2ibga1           5 DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQS   84 (95)
T ss_dssp             CCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEEEE
Confidence            4555676 8888889999999999764 455679999999983  344565544 4567789999999999999999999


Q ss_pred             EcCCcCCCCC
Q psy9139         101 VNSIGESKPS  110 (197)
Q Consensus       101 ~~~~g~~~~s  110 (197)
                      .|..|.+.+|
T Consensus        85 ~n~~G~s~~S   94 (95)
T d2ibga1          85 FSAASASEFS   94 (95)
T ss_dssp             ECSSCBCCCC
T ss_pred             EeCCccCCCC
Confidence            9999998876

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=4e-14  Score=84.73  Aligned_cols=93  Identities=22%  Similarity=0.358  Sum_probs=75.8

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeC-C---CCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDR-T---EDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~-~---~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      |+.+|. +.+...+.+++.|.|.++  .+.++.+.+|.|.++.. .   ..|...........++|.+|.|++.|.|+|+
T Consensus         1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~   80 (101)
T d1x4ya1           1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQ   80 (101)
T ss_dssp             CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEE
Confidence            567787 888899999999999864  46667899999999832 2   2234444566677899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecCC
Q psy9139         100 LVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |.|..|.|.+|..+.++|..
T Consensus        81 a~n~~G~s~~S~~~~~~T~~  100 (101)
T d1x4ya1          81 CFNEGGESEFSNVMICETKA  100 (101)
T ss_dssp             EECTTCCCCCCCCEEEECCC
T ss_pred             EEcCCCCCCCCCcEEEEccC
Confidence            99999999999999888854

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3e-14  Score=87.04  Aligned_cols=91  Identities=27%  Similarity=0.502  Sum_probs=74.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .+|++|. +.+. ...+++.|.|.++.+.++++.+|.|+|+.....+....+....+.+++.+|.|++.|.|+|+|.|..
T Consensus        19 ~vP~~P~~~~~~-~~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   97 (113)
T d1x5ia1          19 RVPEVPSSLHVR-PLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNV   97 (113)
T ss_dssp             SCCCSCSEEEEE-EETTEEEEEEECCSCTTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSS
T ss_pred             CCCCCCEeeeee-eCCCEEEEEEEccccCCccEEEEEEEeeeccccceeeeeeCCccEEEEeccccCcEEEEEEEEECCC
Confidence            4678886 6654 4568999999998877888999999998666666666677788899999999999999999999999


Q ss_pred             cCCCCCCceEeecC
Q psy9139         105 GESKPSKTIAASTK  118 (197)
Q Consensus       105 g~~~~s~~~~~~t~  118 (197)
                      |.|.+.. ..+.|.
T Consensus        98 G~g~~~~-~~~~T~  110 (113)
T d1x5ia1          98 GEGIPLY-ESAVTR  110 (113)
T ss_dssp             CBCCCCC-CCEECC
T ss_pred             cCCCCee-eEEEeC
Confidence            9987643 344444

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3e-14  Score=85.56  Aligned_cols=87  Identities=17%  Similarity=0.287  Sum_probs=71.3

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe------CCCCcEEEE-eCCcccEEEECCCCCCCEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD------RTEDWQSVH-VDAEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~------~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~   97 (197)
                      +.|++|. +.+...+.+++.|.|.+|.+.++++.+|.|.++.      ....|.... .......++|.+|+|++.|.|+
T Consensus         1 d~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   80 (103)
T d1qg3a2           1 EVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYT   80 (103)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEE
T ss_pred             CcCccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEE
Confidence            4688887 8999999999999999998888899999999972      122344433 3456678999999999999999


Q ss_pred             EEEEcCCcCCCCCCc
Q psy9139          98 IKLVNSIGESKPSKT  112 (197)
Q Consensus        98 v~a~~~~g~~~~s~~  112 (197)
                      |+|.|..|.|.++..
T Consensus        81 V~A~n~~G~g~~s~~   95 (103)
T d1qg3a2          81 VKARNGAGWGPEREA   95 (103)
T ss_dssp             EEEEETTEECCCEEE
T ss_pred             EEEEcCCccCCCccc
Confidence            999999999977643

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.55  E-value=8e-14  Score=83.97  Aligned_cols=88  Identities=23%  Similarity=0.403  Sum_probs=71.3

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEe--CCCCcEEEEe-CCcccEEEECCCCCCCEEEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRD--RTEDWQSVHV-DAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~--~~~~~~~~~~-~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      |+.+|. +.+...+.+++.|+|.++  .+.++++.+|+|.|+.  ....|....+ ....+.++|.+|.+++.|.|+|.|
T Consensus         4 P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   83 (105)
T d1cfba2           4 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVA   83 (105)
T ss_dssp             CSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEE
T ss_pred             CCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCccEEEECCCCCCCEEEEEEEE
Confidence            445676 888889999999999974  3567789999999983  4455665543 566788999999999999999999


Q ss_pred             EcCCcCCCCCCceE
Q psy9139         101 VNSIGESKPSKTIA  114 (197)
Q Consensus       101 ~~~~g~~~~s~~~~  114 (197)
                      .|..|.|.++....
T Consensus        84 ~N~~G~gp~S~~~v   97 (105)
T d1cfba2          84 INDRGESNVAAEEV   97 (105)
T ss_dssp             EETTEECSSCCCCE
T ss_pred             EeCCcCCCCCCCcE
Confidence            99999998876543

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=9.8e-15  Score=87.92  Aligned_cols=88  Identities=30%  Similarity=0.482  Sum_probs=68.4

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEe-CCCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRD-RTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~-~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .||++|. +.+...+.+++.|+|.+|. +++.++.+|.++++. ....|.... .......+++.+|.|++.|.|+|+|.
T Consensus         1 ~Pp~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   80 (104)
T d1bpva_           1 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK   80 (104)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred             CCCCCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEeeccceeEEEEcCCCCCCEEEEEEEEE
Confidence            3677776 7777888999999999875 556679999999884 444555433 34567789999999999999999999


Q ss_pred             cCCcC-CCCCCce
Q psy9139         102 NSIGE-SKPSKTI  113 (197)
Q Consensus       102 ~~~g~-~~~s~~~  113 (197)
                      |..|. +.++...
T Consensus        81 n~~G~~s~~S~~s   93 (104)
T d1bpva_          81 NAAGAISPPSEPS   93 (104)
T ss_dssp             CTTSCEEEEEEEE
T ss_pred             ECCCCCCCCcCCC
Confidence            99996 5555443

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.54  E-value=1.8e-14  Score=87.15  Aligned_cols=84  Identities=26%  Similarity=0.419  Sum_probs=61.9

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE------------eCCcccEEEECCCCCCC
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH------------VDAEYREFTLTQLKCGT   92 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~------------~~~~~~~~~i~~L~p~~   92 (197)
                      ||..|  .+...+.+++.|.|.+|.+++.+|.+|.|+++.  ....|....            .......++|.+|+|++
T Consensus         2 PP~~p--~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   79 (107)
T d2ic2a1           2 PPTPP--NVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH   79 (107)
T ss_dssp             CCCCC--EEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSE
T ss_pred             cCcCC--EEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCc
Confidence            56666  456678999999999999888899999999983  344565432            12234579999999999


Q ss_pred             EEEEEEEEEcCCcCCCCCCc
Q psy9139          93 HYKINIKLVNSIGESKPSKT  112 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s~~  112 (197)
                      .|.|+|.|.|..|.+.+|..
T Consensus        80 ~Y~frV~A~N~~G~s~~S~~   99 (107)
T d2ic2a1          80 TYRFRILAVYSNNDNKESNT   99 (107)
T ss_dssp             EEEEEEEEEETTSCEEECCC
T ss_pred             EEEEEEEEEcCCCCCCCCCC
Confidence            99999999999999876643

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=7.5e-14  Score=83.31  Aligned_cols=92  Identities=18%  Similarity=0.185  Sum_probs=72.3

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCC----CCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSY----DGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~----~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      |+.||. +.+...+.+++.|.|.++.    .....+..|.++++. ....+...........++|.+|.|++.|.|+|.|
T Consensus         1 P~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   80 (100)
T d1x5ja1           1 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV   80 (100)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEE
T ss_pred             CCCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecCCCccEEEECCCCCCCEEEEEEEE
Confidence            467787 9999999999999999863    222346788888873 3333333344556678999999999999999999


Q ss_pred             EcCCcCCCCCCceEeecC
Q psy9139         101 VNSIGESKPSKTIAASTK  118 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~  118 (197)
                      .|..|.|.+|..+.+.|.
T Consensus        81 ~n~~g~s~~S~~~~~~T~   98 (100)
T d1x5ja1          81 TKGRRSSTWSMTAHGTTF   98 (100)
T ss_dssp             ECSSCBCCCCCCCCEECC
T ss_pred             EeCCcCcCCCCeEEEEec
Confidence            999999999998888775

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.9e-14  Score=87.91  Aligned_cols=92  Identities=25%  Similarity=0.442  Sum_probs=74.9

Q ss_pred             EEEecCCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe---CCCCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          21 QVTILSPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD---RTEDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        21 ~~~~~~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~---~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      ...+.+.|.+|. +.+...+.+++.|.|.++.+.+.++..|.++++.   ....|...........+.+.+|.|++.|.|
T Consensus        10 ~~~v~d~P~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~f   89 (127)
T d1ueya_          10 PAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSF   89 (127)
T ss_dssp             CCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECC
T ss_pred             cccccccCcCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeecCCceEEEECCCccCCEEEE
Confidence            345567899997 8899999999999999998888889999999983   233444444445566788999999999999


Q ss_pred             EEEEEcCCcCCCCCCc
Q psy9139          97 NIKLVNSIGESKPSKT  112 (197)
Q Consensus        97 ~v~a~~~~g~~~~s~~  112 (197)
                      +|+|.|..|.+.++..
T Consensus        90 rV~A~n~~G~s~~S~~  105 (127)
T d1ueya_          90 RVMAVNSIGKSLPSEA  105 (127)
T ss_dssp             EEEEEESSCBCCCCSC
T ss_pred             EEEEEcCCcCcCCcCC
Confidence            9999999999988754

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1e-13  Score=83.02  Aligned_cols=87  Identities=16%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      |++|. +.+...+.+++.|.|.++.   +.+.+|+|+|+..++......+....+.++|.+|.|++.|.|+|.|.+..|.
T Consensus         1 P~~P~~l~~~~~t~~si~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~   77 (102)
T d2cuha1           1 PDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNL   77 (102)
T ss_dssp             CSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEE
T ss_pred             CcCCCccEEEEeCCCEEEEEEEeee---ccceeeEEEEEeccccceeeeeeeeeeeEEEccEEeeEEEEEEEEEEeCCCC
Confidence            67887 8899999999999999864   4578999999865555555566777889999999999999999999999888


Q ss_pred             CCCCCceEeecC
Q psy9139         107 SKPSKTIAASTK  118 (197)
Q Consensus       107 ~~~s~~~~~~t~  118 (197)
                      +.+. ...+.|.
T Consensus        78 s~~~-~~~~~T~   88 (102)
T d2cuha1          78 TSPA-SITFTTG   88 (102)
T ss_dssp             CCCE-EEEEESC
T ss_pred             cCCE-EEEEECC
Confidence            7764 3445553

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.52  E-value=2.7e-13  Score=78.73  Aligned_cols=85  Identities=25%  Similarity=0.441  Sum_probs=70.7

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ++|. +.+...+.+++.|.|.++.   +.+.+|.|.|+.....+....+....+.++|.+|.|++.|.|+|.|.+..|.+
T Consensus         1 DaP~~l~v~~~t~~sv~v~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s   77 (87)
T d1qr4a1           1 DNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHKS   77 (87)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCBC
T ss_pred             CcCcCcEEEEecCCEEEEEEECCC---CCcceeEEEeecCCcceeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCCCc
Confidence            3676 8899999999999999875   35789999999766667777778888999999999999999999999999988


Q ss_pred             CCCCceEeec
Q psy9139         108 KPSKTIAAST  117 (197)
Q Consensus       108 ~~s~~~~~~t  117 (197)
                      .+. ...+.|
T Consensus        78 ~~~-~~~~~T   86 (87)
T d1qr4a1          78 KPT-TIKGST   86 (87)
T ss_dssp             CCE-EEEEEC
T ss_pred             cCE-EEEEEc
Confidence            764 344443

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.7e-14  Score=84.34  Aligned_cols=93  Identities=27%  Similarity=0.478  Sum_probs=72.9

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEeCC----CCcEE--EEeCCcccEEEECCCCCCCEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRDRT----EDWQS--VHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~~~----~~~~~--~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      .|+.+|. +.+...+.+++.|.|.++.  +.++++.+|.|.|+...    ..+..  .........+.|.+|.|++.|.|
T Consensus         7 ~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   86 (109)
T d1va9a1           7 APDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGV   86 (109)
T ss_dssp             CCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEE
T ss_pred             CCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcceEEEE
Confidence            3446887 8888899999999999874  44568899999998321    11221  12345567899999999999999


Q ss_pred             EEEEEcCCcCCCCCCceEeecC
Q psy9139          97 NIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        97 ~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      +|+|.|..|.|.+|..+.++|.
T Consensus        87 ~V~a~n~~G~g~~S~~v~~~T~  108 (109)
T d1va9a1          87 VVQAFNRAGTGPSSSEINATTL  108 (109)
T ss_dssp             EEEEEETTEECCCCCCEECCCC
T ss_pred             EEEEEcCCcCCCCCCCEEEEcC
Confidence            9999999999999988888774

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.1e-13  Score=81.88  Aligned_cols=83  Identities=24%  Similarity=0.333  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEE-EEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQS-VHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~-~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .+|.|..+.+...+.+++.|.|.++.  +..+.+|+|+++. ....|.. ..+....++++|.+|.|++.|.|+|.|.|.
T Consensus         5 ~vp~P~~l~v~~~t~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~a~~~   82 (95)
T d2fnba_           5 EVPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLIN   82 (95)
T ss_dssp             CSCCCTTCEEECCCSSCEEEECCCCC--CSSCCEEEEEEEEETSCCEEEEEECCSSCSEEEECCCCTTSEEEEEEEEEET
T ss_pred             CcCcCCCeEEEEEcCCEEEEEEEecC--CceEEeEEEEEEEeeccceEEEEEeCCCCeEEEEecccCCEEEEEEEEEEeC
Confidence            35533348899999999999999876  3468899999984 3344443 345677889999999999999999999999


Q ss_pred             CcCCCCC
Q psy9139         104 IGESKPS  110 (197)
Q Consensus       104 ~g~~~~s  110 (197)
                      .|.+.++
T Consensus        83 ~g~s~p~   89 (95)
T d2fnba_          83 GGESAPT   89 (95)
T ss_dssp             TEECCCC
T ss_pred             CcEeCCE
Confidence            9988775

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.2e-13  Score=79.81  Aligned_cols=78  Identities=23%  Similarity=0.425  Sum_probs=64.5

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +|. +.+...+.+++.|.|.++.  +..+.+|.|+|+..  ...+....+....+.++|.+|+|++.|.|+|.|.+..|.
T Consensus         3 pP~~l~~~~~~~~sv~l~W~~p~--~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   80 (91)
T d1fnfa2           3 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE   80 (91)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             cCCceEEEEeCCCEEEEEEEecC--CCCcceeEEEEEECCCCccEEEEEeCCCceEEEEeceeCCCEEEEEEEEEcCCCC
Confidence            455 8899999999999999875  45688999999843  333455566778889999999999999999999999988


Q ss_pred             CCC
Q psy9139         107 SKP  109 (197)
Q Consensus       107 ~~~  109 (197)
                      +.+
T Consensus        81 S~p   83 (91)
T d1fnfa2          81 STP   83 (91)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.6e-13  Score=79.19  Aligned_cols=85  Identities=14%  Similarity=0.194  Sum_probs=70.9

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ++|. +.+...+.+++.|.|.++.   +++.+|.|.|+..++.+....+....+.+++.+|.|++.|.|+|.|.+..|.+
T Consensus         3 ~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s   79 (93)
T d2cuma1           3 EAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLL   79 (93)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBCC
T ss_pred             CcCCCCEEEEeCCCEEEEEEEccc---cccccEEEEEEccccccEEEEECCCccEEEEeCccCCCEEEEEEEEEeCCCCC
Confidence            3565 8888999999999999864   45789999999766677777778888999999999999999999999999988


Q ss_pred             CCCCceEeec
Q psy9139         108 KPSKTIAAST  117 (197)
Q Consensus       108 ~~s~~~~~~t  117 (197)
                      .+.. ..+.|
T Consensus        80 ~~~~-~~~tT   88 (93)
T d2cuma1          80 PPVS-TSFTT   88 (93)
T ss_dssp             CCEE-EEEEC
T ss_pred             CCEE-EEEEe
Confidence            7653 44444

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.3e-13  Score=81.77  Aligned_cols=85  Identities=14%  Similarity=0.309  Sum_probs=69.2

Q ss_pred             CCCCCE-EEEEee--cCCeEEEEeeeCC--CCCccccEEEEEEE-eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          27 PPGVPN-ILLQST--TTHSISILWKPSY--DGGAIITHYIVSYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        27 ~P~~p~-~~~~~~--~~~~~~l~W~~~~--~~~~~i~~y~v~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .|++|. +.+..+  ..+.+.|.|.+|.  +.+..+..|.|+++ .....|....+....+.++|.+|.|++.|.|+|+|
T Consensus         1 kP~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra   80 (104)
T d1n26a3           1 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRA   80 (104)
T ss_dssp             CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEEEEEEE
T ss_pred             CCcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeeccccceEEEEECCCCCCCEEEEEEEE
Confidence            488897 666554  4578999999975  44556888999998 45667888777777889999999999999999999


Q ss_pred             EcCCcCCCCCC
Q psy9139         101 VNSIGESKPSK  111 (197)
Q Consensus       101 ~~~~g~~~~s~  111 (197)
                      .|..|.|.+|+
T Consensus        81 ~n~~g~g~wSe   91 (104)
T d1n26a3          81 QEEFGQGEWSE   91 (104)
T ss_dssp             EETTTBSCCCC
T ss_pred             EeCCCccCCcC
Confidence            99999877664

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.6e-14  Score=89.23  Aligned_cols=92  Identities=18%  Similarity=0.296  Sum_probs=70.1

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEE----e-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYR----D-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~----~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .+|.+|. +.+..++.+++.|.|.+|. +++..+..|.++|+    + ....|..+. ....+.++|.+|+|++.|.|+|
T Consensus        14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV   92 (120)
T d1wfua_          14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY-TGYATRHVVEGLEPRTLYKFRL   92 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE-EESCSEEEEESCCTTCEEEEEE
T ss_pred             cCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeec-cccccEEeCCCCCCCcEeeEEE
Confidence            4566666 6677788999999999876 44445666666665    2 233455444 4456789999999999999999


Q ss_pred             EEEcCCcCCCCCCceEeecC
Q psy9139          99 KLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        99 ~a~~~~g~~~~s~~~~~~t~  118 (197)
                      +|.|..|.+.++..+.+.|.
T Consensus        93 ~A~n~~G~s~~S~~~~~~T~  112 (120)
T d1wfua_          93 KVTSPSGEYEYSPVVSVATT  112 (120)
T ss_dssp             EEECSSSCEEECCCEEEECC
T ss_pred             EEEeCCcEeCCCCCEEEEeC
Confidence            99999999998888887774

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3e-13  Score=79.02  Aligned_cols=80  Identities=19%  Similarity=0.317  Sum_probs=67.2

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +++|. +.+...+.+++.|.|.++.   +++.+|.|.|...  .+.+....+....+.++|.+|.|++.|.|+|.|.+..
T Consensus         2 ld~P~~l~v~~~s~~s~~l~W~~p~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   78 (90)
T d1tena_           2 LDAPSQIEVKDVTDTTALITWFKPL---AEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD   78 (90)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCCcEEEEecCCEEEEEEEeCc---eEeccEEEEEEEcCCCceeEEEEecCCcceeeEeeecCCCEEEEEEEEEeCC
Confidence            46776 9999999999999999864   4678999999843  3445566677888899999999999999999999999


Q ss_pred             cCCCCC
Q psy9139         105 GESKPS  110 (197)
Q Consensus       105 g~~~~s  110 (197)
                      |.+.+.
T Consensus        79 g~s~~~   84 (90)
T d1tena_          79 MSSNPA   84 (90)
T ss_dssp             EECCCE
T ss_pred             CEeCCE
Confidence            988764

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.50  E-value=6e-13  Score=79.73  Aligned_cols=90  Identities=18%  Similarity=0.345  Sum_probs=67.6

Q ss_pred             CCCCCE-EEEE----eecCCeEEEEeeeCCC----CCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          27 PPGVPN-ILLQ----STTTHSISILWKPSYD----GGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        27 ~P~~p~-~~~~----~~~~~~~~l~W~~~~~----~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      .|+||. +.+.    ....+++.|+|++|..    .+..+..|.++++. ....|.... ....+.+++.+|.+++.|.|
T Consensus         2 kP~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~   80 (103)
T d1f6fb2           2 EPEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHF-TGHQTQFKVFDLYPGQKYLV   80 (103)
T ss_dssp             CCCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEE-EETCSEEEECCCCTTCEEEE
T ss_pred             CCCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeec-ccceeEEEeCCCCcceEEEE
Confidence            588887 5443    3467789999999852    23456789999984 455566544 34567899999999999999


Q ss_pred             EEEEEcCCcC-CCCCCceEeec
Q psy9139          97 NIKLVNSIGE-SKPSKTIAAST  117 (197)
Q Consensus        97 ~v~a~~~~g~-~~~s~~~~~~t  117 (197)
                      +|+|.+..|. |.+|....+.+
T Consensus        81 rVra~~~~G~wS~wS~~~~~~~  102 (103)
T d1f6fb2          81 QTRCKPDHGYWSRWSQESSVEM  102 (103)
T ss_dssp             EEEEEESSSCCCCCCCCEEEEC
T ss_pred             EEEEEeCCCCCCCCcCceeeEC
Confidence            9999999996 88888777655

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.9e-14  Score=85.68  Aligned_cols=93  Identities=23%  Similarity=0.363  Sum_probs=73.6

Q ss_pred             CCC-CCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEeCCCC-cEE-EEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          26 SPP-GVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRDRTED-WQS-VHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        26 ~~P-~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~~~~~-~~~-~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      ..| .+|. +.+...+.+++.|.|.++.  ..++.+.+|.|+|+..... +.. ..+......+.|.+|+|++.|.|+|+
T Consensus         9 ~~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~   88 (119)
T d1x5ha1           9 DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVA   88 (119)
T ss_dssp             SSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCEEEEECE
T ss_pred             CCCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccceeeeecCCCccEEEeCCCCCCCEEEEEEE
Confidence            345 5677 8888899999999999863  4556799999999854332 221 22456678899999999999999999


Q ss_pred             EEcCCcCCCCCCceEeecC
Q psy9139         100 LVNSIGESKPSKTIAASTK  118 (197)
Q Consensus       100 a~~~~g~~~~s~~~~~~t~  118 (197)
                      |.|..|.|.+|..+.++|.
T Consensus        89 A~n~~G~G~~S~~~~~~T~  107 (119)
T d1x5ha1          89 ALTINGTGPATDWLSAETF  107 (119)
T ss_dssp             EEETTEEEEECCCEEEECC
T ss_pred             EEcCCcCCCCCCCEEEEeC
Confidence            9999999988888888774

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.3e-13  Score=81.90  Aligned_cols=85  Identities=16%  Similarity=0.199  Sum_probs=63.2

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +.+...+.+++.|+|.++.+.+..+..|.|+|+.  ....|.... .......++|.+|.|++.|.|+|+|.|..|.|.+
T Consensus        13 p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G~~   92 (105)
T d2d9qb2          13 PEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW   92 (105)
T ss_dssp             ------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred             CEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeecccCCcceeEEecccCCeEEEEEEEEEeCCCCCCC
Confidence            6666778999999999987666678889999983  455666554 4566778999999999999999999999998654


Q ss_pred             ---CCceEeec
Q psy9139         110 ---SKTIAAST  117 (197)
Q Consensus       110 ---s~~~~~~t  117 (197)
                         |..+.++|
T Consensus        93 S~wS~~~~~~t  103 (105)
T d2d9qb2          93 SDWSPSLELRT  103 (105)
T ss_dssp             CCCCCCEEECC
T ss_pred             cCCCCCEEEeC
Confidence               44555554

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-13  Score=81.01  Aligned_cols=82  Identities=20%  Similarity=0.449  Sum_probs=65.3

Q ss_pred             EEEEee--cCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          33 ILLQST--TTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        33 ~~~~~~--~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      +.+...  ..+++.|.|.+|.  ...|.+|+|+|+.  ....|..+.++...+.++|.+|+|++.|.|+|.|.|..|.++
T Consensus         6 ~~vt~~~~~~~s~~vsW~~P~--~~~i~~Y~i~y~~~~~~~~~~~~~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~s~   83 (93)
T d1owwa_           6 VFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE   83 (93)
T ss_dssp             EECCCCSSCTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEE
T ss_pred             cEEEEccCCCCEEEEEeeccc--ccceeEEEEEEeeccccceeeeeccCCCccEEEECCcccCcEEEEEEEEEeCCCccC
Confidence            444443  4579999999985  4579999999994  345577788888889999999999999999999999999887


Q ss_pred             CCCceEeec
Q psy9139         109 PSKTIAAST  117 (197)
Q Consensus       109 ~s~~~~~~t  117 (197)
                      .+. ..++|
T Consensus        84 ~~~-~~~tT   91 (93)
T d1owwa_          84 VTR-FDFTT   91 (93)
T ss_dssp             EEE-EEEEE
T ss_pred             cEE-EEEEe
Confidence            653 44443

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6e-13  Score=79.81  Aligned_cols=91  Identities=19%  Similarity=0.324  Sum_probs=64.2

Q ss_pred             CCCCCE-EEEE----eecCCeEEEEeeeCCCC----CccccEEEEEEEeCC-CCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          27 PPGVPN-ILLQ----STTTHSISILWKPSYDG----GAIITHYIVSYRDRT-EDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        27 ~P~~p~-~~~~----~~~~~~~~l~W~~~~~~----~~~i~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      .|++|. +.+.    ..+.+.+.|+|.+|...    ...+..|.++++... ..|.. ......+.++|.+|.|++.|.|
T Consensus         2 kP~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~   80 (104)
T d3d48r2           2 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-HFAGQQTEFKILSLHPGQKYLV   80 (104)
T ss_dssp             CCCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEE-EEEETCSEEEECC--CCCEEEE
T ss_pred             CCcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceee-eccccccEEEECCCCCCCEEEE
Confidence            588886 5543    44677899999997532    234567888887544 34443 3345567899999999999999


Q ss_pred             EEEEEcCCcC-CCCCCceEeecC
Q psy9139          97 NIKLVNSIGE-SKPSKTIAASTK  118 (197)
Q Consensus        97 ~v~a~~~~g~-~~~s~~~~~~t~  118 (197)
                      +|+|.|..|. |.+|..+.+.++
T Consensus        81 rVrA~n~~G~ws~wS~~~~v~tP  103 (104)
T d3d48r2          81 QVRCKPDHGYWSAWSPATFIQIP  103 (104)
T ss_dssp             EEEEEESSSCCCCCCCCEEEECC
T ss_pred             EEEEEeCCCCCCCCcCCEEEECc
Confidence            9999999997 889988888764

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.1e-13  Score=78.80  Aligned_cols=78  Identities=27%  Similarity=0.322  Sum_probs=64.2

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCC-CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTE-DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      ++|. +.+...+.+++.|+|.++.   +.+.+|+|.|+. ... ......++...+.++|.+|.|++.|.|+|.|.+..|
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~Y~i~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g   78 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGRE   78 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTE
T ss_pred             ccCcCCEEEEecCCEEEEEEEeCC---CEEeeEEEEEEECCCCCceEEEEECCCccEEEECCCcccCEEEEEEEEEcCCc
Confidence            4676 8899999999999999874   457899999983 223 334455677888999999999999999999999999


Q ss_pred             CCCC
Q psy9139         106 ESKP  109 (197)
Q Consensus       106 ~~~~  109 (197)
                      .+.+
T Consensus        79 ~s~p   82 (89)
T d1fnfa3          79 ESPL   82 (89)
T ss_dssp             ECCC
T ss_pred             CcCC
Confidence            8765

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=99.48  E-value=5.3e-13  Score=77.60  Aligned_cols=84  Identities=25%  Similarity=0.357  Sum_probs=66.5

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCc
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIG  105 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g  105 (197)
                      .|.+|. +.+...+.+++.|+|.++.+. ..+.+|.|.+..  .  ..  .....+.+++.+|.|++.|.|+|+|.|..|
T Consensus         3 AP~~P~~l~~~~~~~~sv~lsW~~p~~~-~~i~~Y~i~~~~--~--~~--~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~G   75 (88)
T d1k85a_           3 APTAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYNGT--A--LA--TTVTGTTATISGLAADTSYTFTVKAKDAAG   75 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEESS--S--EE--EEESSSEEEECCCCSSCEEEEEEEEEETTT
T ss_pred             CcCCCCCcEEEEecCCEEEEEEeCCCCC-CCEEEEEEEccc--e--EE--EecCCCEEEECCCCCCCEEEEEEEEEECCC
Confidence            578888 888889999999999988754 347888887531  1  11  233457899999999999999999999999


Q ss_pred             -CCCCCCceEeec
Q psy9139         106 -ESKPSKTIAAST  117 (197)
Q Consensus       106 -~~~~s~~~~~~t  117 (197)
                       .+.+|..+.++|
T Consensus        76 ~~s~~S~~v~vtT   88 (88)
T d1k85a_          76 NVSAASNAVSVKT   88 (88)
T ss_dssp             EECCCCCCEEEEC
T ss_pred             CcCCCCcCEEEEC
Confidence             588888777654

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=6.3e-13  Score=76.93  Aligned_cols=79  Identities=25%  Similarity=0.440  Sum_probs=66.4

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ++|. +.+...+.+++.|.|.++.   +.+.+|.|+|+...+......+....+.+.+.+|.|++.|.|+|.|.+..|.+
T Consensus         2 ~~P~nl~v~~~~~~s~~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s   78 (86)
T d1tdqa3           2 DSPRDLMVTASSETSISLIWTKAS---GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQS   78 (86)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCC---SCCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred             ccCCCCEEEEecCCEEEEEEeCCC---CCccceEEEEecccccceEEEeCCCccEEEECCCccccEEEEEEEEEcCCCEE
Confidence            3565 8888899999999999874   45789999999655555566667778899999999999999999999999988


Q ss_pred             CCC
Q psy9139         108 KPS  110 (197)
Q Consensus       108 ~~s  110 (197)
                      .++
T Consensus        79 ~p~   81 (86)
T d1tdqa3          79 LES   81 (86)
T ss_dssp             CCE
T ss_pred             CCE
Confidence            764

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=1.5e-12  Score=76.40  Aligned_cols=86  Identities=19%  Similarity=0.366  Sum_probs=69.3

Q ss_pred             CCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +++|. +.+...+.+++.|+|.++.   +++.+|.|.|+.  ..+.+.........+.+++.+|.|++.|.|+|.|.+..
T Consensus         4 ~~~P~~l~v~~v~~~si~v~W~~p~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~   80 (93)
T d1tdqa1           4 IDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGT   80 (93)
T ss_dssp             SCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCcCCCCEEEEeCCCEEEEEEEccc---cCCCceEEEEEeccCcceeeEEEeCCCceEEEEeCcccceEEEEEEEEEeCC
Confidence            46776 8999999999999999864   467899999983  33444566677888899999999999999999999999


Q ss_pred             cCCCCCCceEeec
Q psy9139         105 GESKPSKTIAAST  117 (197)
Q Consensus       105 g~~~~s~~~~~~t  117 (197)
                      |.+.++ ...+.|
T Consensus        81 g~s~~~-~~~~tT   92 (93)
T d1tdqa1          81 NESDAS-STQFTT   92 (93)
T ss_dssp             EECCCE-EEEEEC
T ss_pred             CCcCCE-EEEEEC
Confidence            988765 334443

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.46  E-value=5.3e-13  Score=77.60  Aligned_cols=78  Identities=29%  Similarity=0.438  Sum_probs=65.9

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      +|. +.+...+.+++.|.|.++.   +.+.+|.|+|+. ..+.|.........+.+++.+|.|++.|.|+|.|.|..|.+
T Consensus         3 ~P~~l~v~~v~~~s~~l~W~~~~---~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s   79 (88)
T d1qr4a2           3 SPKGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEES   79 (88)
T ss_dssp             CCSCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred             CCcceEEEEecCCEEEEEEEccc---EeeceEEEEEEeccCCceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCCCCc
Confidence            454 8999999999999999864   467899999984 45566666667778899999999999999999999999987


Q ss_pred             CCC
Q psy9139         108 KPS  110 (197)
Q Consensus       108 ~~s  110 (197)
                      .+.
T Consensus        80 ~p~   82 (88)
T d1qr4a2          80 EPI   82 (88)
T ss_dssp             CCE
T ss_pred             CCE
Confidence            663

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=9e-13  Score=77.56  Aligned_cols=81  Identities=22%  Similarity=0.345  Sum_probs=62.9

Q ss_pred             CCCCCE-EEEEeecC-CeEEEEeeeCCCCCccccEEEEEEEeCC-C--CcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTT-HSISILWKPSYDGGAIITHYIVSYRDRT-E--DWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~-~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      |+.||. +.+..... +.+.|.|.++.  +..+.+|+|.|+... .  ......+....+.++|.+|.|++.|.|+|.|.
T Consensus         1 P~~PP~~l~v~~~~~ts~i~v~W~~p~--~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~   78 (94)
T d1fnfa1           1 PLSPPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV   78 (94)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred             CCCcCcCcEEEEecCCCEEEEEeeCCC--CCCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEEEE
Confidence            456787 88877765 45899999875  334899999998422 2  23444567778899999999999999999999


Q ss_pred             cCCcCCCC
Q psy9139         102 NSIGESKP  109 (197)
Q Consensus       102 ~~~g~~~~  109 (197)
                      +..|.+.+
T Consensus        79 ~~~g~s~p   86 (94)
T d1fnfa1          79 KDDKESVP   86 (94)
T ss_dssp             ETTEECCC
T ss_pred             cCCCEeCC
Confidence            99987754

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=5.6e-13  Score=80.28  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=60.7

Q ss_pred             EEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE-eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          32 NILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH-VDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        32 ~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~-~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .+.+.....+++.|.|+++.+.+..+..|.|+|+.  ....|..+. .....+.++|.+|.|++.|.|+|+|.+..|.+.
T Consensus        13 ~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~~g~g~   92 (106)
T d1cd9b2          13 GPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGF   92 (106)
T ss_dssp             -------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCC
T ss_pred             CCeEecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecccCCceEEEEeccCCCeEEEEEEEEEeCCCCCC
Confidence            36677778999999999987666678899999983  456787765 345678899999999999999999999999866


Q ss_pred             CCC
Q psy9139         109 PSK  111 (197)
Q Consensus       109 ~s~  111 (197)
                      +|.
T Consensus        93 wS~   95 (106)
T d1cd9b2          93 WSP   95 (106)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            554

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=9.3e-13  Score=76.88  Aligned_cols=79  Identities=25%  Similarity=0.387  Sum_probs=66.3

Q ss_pred             CCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          29 GVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        29 ~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .||. +++...+.+++.|.|.++.   +++.+|.|+|.. ....+...........+.+.+|.|++.|.|+|.+.+..|.
T Consensus         3 spP~~l~v~~~~~~si~v~W~~p~---~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   79 (90)
T d1fnha2           3 SPPRRARVTDATETTITISWRTKT---ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNAR   79 (90)
T ss_dssp             CCCEEEEEEEECSSEEEEEEECCS---SCCCCEEEEEEESSSSCCEEEECCTTCSEEEEESCCTTCEEEEEEEEEETTEE
T ss_pred             CcCCCCEEEEecCCEEEEEEECCC---CCCceeEEEEEEccCCceEEEecCCCccEEEeCCCCCCcEEEEEEEEEeCCCC
Confidence            4566 8999999999999999865   457889999984 3445666667778889999999999999999999999998


Q ss_pred             CCCC
Q psy9139         107 SKPS  110 (197)
Q Consensus       107 ~~~s  110 (197)
                      +.+.
T Consensus        80 s~p~   83 (90)
T d1fnha2          80 SSPV   83 (90)
T ss_dssp             CCCE
T ss_pred             cCCE
Confidence            8753

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.2e-13  Score=79.73  Aligned_cols=82  Identities=11%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcE-EEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQ-SVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~-~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .||++|. +.+...+..++.|.|.++.+++.+ ..|.|.++... ..|. ..........+.+.+|.+++.|.|+|.|.|
T Consensus         2 ~PP~~P~n~~~~~~~~~si~~~W~p~~~~~~~-~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N   80 (95)
T d1bqua1           2 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLE-TNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAEN   80 (95)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCSCCSSC-CEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEE
T ss_pred             cCcCCCeeeEEEEccCCEEEEEEeCcccCCCc-eEEEEEEEEcccceeEeecccccceeeeeeeecCCCcEEEEEEEEEe
Confidence            4799998 999999999999999999877665 67999988432 2232 223345566678889999999999999999


Q ss_pred             CCcCCC
Q psy9139         103 SIGESK  108 (197)
Q Consensus       103 ~~g~~~  108 (197)
                      ..|.+.
T Consensus        81 ~~G~s~   86 (95)
T d1bqua1          81 ALGKVT   86 (95)
T ss_dssp             TTEEEE
T ss_pred             CCcccc
Confidence            999875

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.44  E-value=1.4e-12  Score=76.35  Aligned_cols=84  Identities=31%  Similarity=0.397  Sum_probs=65.1

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEE---EeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSV---HVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~---~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      +|. +.+...+.+++.|.|.++.   +.+.+|.|+|+.. ...+...   ......+.++|.+|.|++.|.|+|.|.+..
T Consensus         3 aP~~l~v~~~~~~sv~v~W~~p~---~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   79 (92)
T d1tdqa2           3 APKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNS   79 (92)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred             cCcCCEEEEecCCEEEEEEEecC---CcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEeCC
Confidence            555 8899999999999999874   4578999999843 2333322   234566789999999999999999999999


Q ss_pred             cCCCCCCceEeec
Q psy9139         105 GESKPSKTIAAST  117 (197)
Q Consensus       105 g~~~~s~~~~~~t  117 (197)
                      |.+.++ ...++|
T Consensus        80 g~s~p~-~~~~~T   91 (92)
T d1tdqa2          80 KQSIPA-TMNART   91 (92)
T ss_dssp             EECCCE-EEEEEC
T ss_pred             CEecCE-EEEEEC
Confidence            998765 454544

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.7e-13  Score=84.92  Aligned_cols=91  Identities=18%  Similarity=0.191  Sum_probs=67.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC--------cEE---------EEeCCcccEEEECC
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED--------WQS---------VHVDAEYREFTLTQ   87 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~--------~~~---------~~~~~~~~~~~i~~   87 (197)
                      ..|.+|. +.+. ...+++.|.|.+|.+.+++|.+|.|+|+.....        +..         ..+......+.|.+
T Consensus         6 ~~P~aP~~v~v~-~~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   84 (123)
T d1wfta_           6 SGPGAPSTVRIS-KNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHID   84 (123)
T ss_dssp             SCCCCCEEEEEE-ECSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCB
T ss_pred             CCCcCCcccEEE-eCCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcC
Confidence            4688887 6665 467899999999987788999999999732111        111         11222334567889


Q ss_pred             CCCCCEEEEEEEEEcCCcCCCCCCceEeec
Q psy9139          88 LKCGTHYKINIKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        88 L~p~~~y~~~v~a~~~~g~~~~s~~~~~~t  117 (197)
                      |.|++.|.|+|+|.|..|.|.++....+++
T Consensus        85 L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t  114 (123)
T d1wfta_          85 YTSRPAIVFRISAKNEKGYGPATQIRWLQG  114 (123)
T ss_dssp             CSSSCEEEEEEEEBSSSSBCCCEEEEEECC
T ss_pred             CCCCCEEEEEEEEecCCcCCCCCCcEEEEe
Confidence            999999999999999999998887666655

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.8e-12  Score=74.76  Aligned_cols=83  Identities=19%  Similarity=0.376  Sum_probs=66.5

Q ss_pred             CE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          31 PN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        31 p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      |. +.+...+.+++.|.|.++.   ..+.+|.++|..  ..+.+.........+++++.+|.|++.|.|+|.|.|..|.+
T Consensus         3 P~~l~~~~v~~~si~l~W~~p~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g~s   79 (90)
T d1fnha1           3 PTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTS   79 (90)
T ss_dssp             CEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSCSCCCEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred             CCCEEEEEecCCEEEEEEEccc---eeccceEEEEEeeeCCCceEEEEeCCCCeEEEEecccCceEEEEEEEEEeCCCCc
Confidence            44 8999999999999999875   346789999873  34445555667788899999999999999999999999998


Q ss_pred             CCCCceEeec
Q psy9139         108 KPSKTIAAST  117 (197)
Q Consensus       108 ~~s~~~~~~t  117 (197)
                      .++. ..+.|
T Consensus        80 ~~~~-~~~~T   88 (90)
T d1fnha1          80 RPAQ-GVVTT   88 (90)
T ss_dssp             CCEE-EEEEC
T ss_pred             CCEe-EEEEc
Confidence            8763 33444

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4e-13  Score=83.36  Aligned_cols=94  Identities=18%  Similarity=0.273  Sum_probs=72.6

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCC--CCCccccEEEEEEEe-CCCC--------cEEEEeCCcccEEEECCCCCCCE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSY--DGGAIITHYIVSYRD-RTED--------WQSVHVDAEYREFTLTQLKCGTH   93 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~--~~~~~i~~y~v~~~~-~~~~--------~~~~~~~~~~~~~~i~~L~p~~~   93 (197)
                      .|+.+|. +.+...+.+++.|.|+++.  ..+..+..|.+.+.. ....        ............++|.+|.|++.
T Consensus        13 ~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   92 (125)
T d1uena_          13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSH   92 (125)
T ss_dssp             CCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCE
T ss_pred             CCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECCCCCCCE
Confidence            4567787 8888899999999999875  334567888888762 1111        12223456677899999999999


Q ss_pred             EEEEEEEEcCCcCCCCCCceEeecCC
Q psy9139          94 YKINIKLVNSIGESKPSKTIAASTKG  119 (197)
Q Consensus        94 y~~~v~a~~~~g~~~~s~~~~~~t~~  119 (197)
                      |.|+|+|.|..|.+.++..+.++|.+
T Consensus        93 Y~~~V~A~n~~G~g~~S~~~~~~T~~  118 (125)
T d1uena_          93 YTLNVRVVNGKGEGPASPDRVFNTPE  118 (125)
T ss_dssp             EEEEEEEEESSCEEEECCCEEEECCC
T ss_pred             EEEEEEEEeCCcccCCCCCEEEECCC
Confidence            99999999999999998888888853

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.1e-12  Score=74.97  Aligned_cols=93  Identities=18%  Similarity=0.162  Sum_probs=69.5

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCC--ccccEEEEEEEeCCCC---cEEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGG--AIITHYIVSYRDRTED---WQSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~--~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+.||. +.+...+.+++.|.|.++....  .....|.++++.....   +...........+.|.+|+|++.|.|+|+|
T Consensus         2 rl~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra   81 (104)
T d2b5ib2           2 RLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRV   81 (104)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEE
T ss_pred             ccCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEEEE
Confidence            467887 9999999999999999976332  2355688888743332   233445566788999999999999999999


Q ss_pred             EcCCcC----CCCCCceEeecCC
Q psy9139         101 VNSIGE----SKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~----~~~s~~~~~~t~~  119 (197)
                      .+..|.    +.+|..+.++|.+
T Consensus        82 ~~~~g~~g~wS~wS~~v~~~T~P  104 (104)
T d2b5ib2          82 KPLQGEFTTWSPWSQPLAFRTKP  104 (104)
T ss_dssp             EESCCSSCCCCCCCCCEEEECCC
T ss_pred             EECCCCCCCCCCCcCCEEEECCC
Confidence            988875    4556667777753

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.8e-12  Score=74.14  Aligned_cols=76  Identities=16%  Similarity=0.323  Sum_probs=61.8

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .|.+|. +.+...+.+++.|.|.++..  ..+..|.|+++. ....|..... ...+.+++.+|.|++.|.|+|+|.+..
T Consensus         2 ~P~~P~nl~v~~~~~~~v~l~W~~p~~--~~~~~y~v~y~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~frVRa~~~~   78 (95)
T d2b5ic1           2 IPWAPENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDHSWTEQSV-DYRHKFSLPSVDGQKRYTFRVRSRFNP   78 (95)
T ss_dssp             ECCCCEEEEEEEEETTEEEEEEECSSC--STTCEEEEEEEETTCSSCEEEEE-CSSCEEEECSCCTTSCEEEEEEEECCS
T ss_pred             CCcCCCCCEEEEEeCCEEEEEECCCCC--ceeEEEEEEEEcCCCceeeEeee-cccceeEcCCCCCCCEEEEEEEEeeCC
Confidence            588897 99988999999999998763  456789999984 4556766553 446789999999999999999998655


Q ss_pred             c
Q psy9139         105 G  105 (197)
Q Consensus       105 g  105 (197)
                      +
T Consensus        79 ~   79 (95)
T d2b5ic1          79 L   79 (95)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4.3e-12  Score=74.11  Aligned_cols=76  Identities=24%  Similarity=0.375  Sum_probs=62.2

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      +.+...+.+++.|.|.+|.   +.+.+|.|+|...  ...+....++.+.++++|.+|.|++.|.|+|.|.+..|.+.++
T Consensus         3 l~v~~~t~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~~~   79 (91)
T d1fnaa_           3 LEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPAS   79 (91)
T ss_dssp             CEEEEECSSCEEEECCCCS---SCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCSSCS
T ss_pred             CEEEEeCCCEEEEEEEccc---eEecEEEEEEEcCCCCceeEEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCccCCCc
Confidence            5677889999999999874   3578999999842  3334455677788899999999999999999999999988764


Q ss_pred             C
Q psy9139         111 K  111 (197)
Q Consensus       111 ~  111 (197)
                      .
T Consensus        80 s   80 (91)
T d1fnaa_          80 S   80 (91)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.5e-12  Score=75.87  Aligned_cols=77  Identities=30%  Similarity=0.478  Sum_probs=61.2

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-cEEE-EeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-WQSV-HVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-~~~~-~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +|. +.+...+.+++.|.|.++.   +.+.+|.|+++..++. +... ......+.++|.+|.|++.|.|+|.|.|..|.
T Consensus         3 aP~nl~v~~~~~~s~~l~W~~p~---~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~g~   79 (89)
T d1fnha3           3 APSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQK   79 (89)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS---SCCSEEEEEEECTTSCCEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSSCE
T ss_pred             cCcCCEEEEecCCEEEEEEeCCC---cCCceEEEEEeeccCCccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCCCE
Confidence            565 8899999999999999874   4688999999854333 3222 24556778999999999999999999999887


Q ss_pred             CCC
Q psy9139         107 SKP  109 (197)
Q Consensus       107 ~~~  109 (197)
                      +.+
T Consensus        80 S~p   82 (89)
T d1fnha3          80 SEP   82 (89)
T ss_dssp             EEE
T ss_pred             eCC
Confidence            654

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.1e-12  Score=76.90  Aligned_cols=90  Identities=12%  Similarity=0.273  Sum_probs=66.0

Q ss_pred             CCCCE-EEEEee------cCCeEEEEeeeCCCCC----ccccEEEEEEE-eCCCCcEEEEeCCcccEEEECCCCCCCEEE
Q psy9139          28 PGVPN-ILLQST------TTHSISILWKPSYDGG----AIITHYIVSYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYK   95 (197)
Q Consensus        28 P~~p~-~~~~~~------~~~~~~l~W~~~~~~~----~~i~~y~v~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~   95 (197)
                      |+||. +.+...      ...++.|+|++|...+    ..+..|.|+|+ .....|..+. ....+.++|.+|.+++.|.
T Consensus         1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~-~~~~~~~~i~~L~~~t~Y~   79 (106)
T d1axib2           1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD-PILTTSVPVYSLKVDKEYE   79 (106)
T ss_dssp             CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-CBSSSEEEEEEEETTSCEE
T ss_pred             CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeee-ecccceEEECCCCCCCEEE
Confidence            77887 554321      2357999999985322    24677999998 4566776654 4456789999999999999


Q ss_pred             EEEEEEcCCc--CCCCCCceEeecC
Q psy9139          96 INIKLVNSIG--ESKPSKTIAASTK  118 (197)
Q Consensus        96 ~~v~a~~~~g--~~~~s~~~~~~t~  118 (197)
                      |+|+|.+..|  .|.+|..+.++++
T Consensus        80 frVRa~~~~~g~ws~wS~~v~v~~P  104 (106)
T d1axib2          80 VRVRSKQRNSGNYGEFSEVLYVTLP  104 (106)
T ss_dssp             EEEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEEEEECCCCCCCCCCCCEEEECC
Confidence            9999988654  3788888777664

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.1e-12  Score=78.10  Aligned_cols=93  Identities=20%  Similarity=0.351  Sum_probs=68.5

Q ss_pred             CCCCCCE-EEEE--eecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE---eCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQ--STTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH---VDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~--~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~---~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ..|.+|. +.+.  .....++.|.|.++.+.++++..|.|+|+. ....|....   .....+.+.|.+|.+++.|.|+|
T Consensus         3 vkP~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V   82 (115)
T d1bqua2           3 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRI   82 (115)
T ss_dssp             EECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEE
T ss_pred             eECCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccccccccccEEeeCCCccCcEEEEEE
Confidence            4578886 5554  456788999999987667788999999984 444454332   23556789999999999999999


Q ss_pred             EEEcCCcCCCCC---CceEeecC
Q psy9139          99 KLVNSIGESKPS---KTIAASTK  118 (197)
Q Consensus        99 ~a~~~~g~~~~s---~~~~~~t~  118 (197)
                      +|.|..|.+.+|   ....+.|.
T Consensus        83 ~a~~~~G~g~~S~~S~~~~~~T~  105 (115)
T d1bqua2          83 RCMKEDGKGYWSDWSEEASGITY  105 (115)
T ss_dssp             EEEETTSCSCCCCCCCCEEEEEC
T ss_pred             EEEeCCCccCCcCCcCCEEEECC
Confidence            999999987654   44555554

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=7.9e-12  Score=76.79  Aligned_cols=81  Identities=23%  Similarity=0.381  Sum_probs=66.6

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEe-----CCCCcEEEEeC-CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRD-----RTEDWQSVHVD-AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSK  111 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-----~~~~~~~~~~~-~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~  111 (197)
                      ++++++.|.|+++.. +..|.+|.|.|+.     ....|....+. .....++|.+|.|++.|.|+|.|.|..|.+.+|.
T Consensus        27 ~s~tsi~v~W~~p~~-~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~  105 (120)
T d1ujta_          27 LTPTTVQVTWTVDRQ-PQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSE  105 (120)
T ss_dssp             CBTTEEEEEEEESSC-CSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred             eCCCeEEEEecCCCC-CCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcCCCC
Confidence            678999999998754 4578999999972     23456666543 4577899999999999999999999999999998


Q ss_pred             ceEeecCC
Q psy9139         112 TIAASTKG  119 (197)
Q Consensus       112 ~~~~~t~~  119 (197)
                      .+.++|.+
T Consensus       106 ~~~~~T~e  113 (120)
T d1ujta_         106 SKTVRTTE  113 (120)
T ss_dssp             CEEEEECS
T ss_pred             CEEEEeCC
Confidence            88887754

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.1e-12  Score=74.67  Aligned_cols=78  Identities=22%  Similarity=0.404  Sum_probs=61.5

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-cEEE-EeCCcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTED-WQSV-HVDAEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-~~~~-~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      +|. +.+...+.+++.|.|.++.   +.+.+|++.|+..... +... ......+.+++.+|.|++.|.|+|.|.+..|.
T Consensus         4 ~P~~l~v~~vt~~sv~l~W~~p~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   80 (94)
T d1j8ka_           4 RPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDME   80 (94)
T ss_dssp             CCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCC
T ss_pred             CCCCCEEEEecCCEEEEEEeCCC---ccccceEEEEEeecCCCceEEEecCCCccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence            444 8888999999999999874   3578899999854333 2222 24566788999999999999999999999998


Q ss_pred             CCCC
Q psy9139         107 SKPS  110 (197)
Q Consensus       107 ~~~s  110 (197)
                      +.+.
T Consensus        81 S~p~   84 (94)
T d1j8ka_          81 SQPL   84 (94)
T ss_dssp             CCCE
T ss_pred             cCCE
Confidence            7664

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.1e-14  Score=87.42  Aligned_cols=93  Identities=17%  Similarity=0.268  Sum_probs=71.5

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC-CCcE---EEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT-EDWQ---SVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~-~~~~---~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      .+|+.|. +.+.....+++.|.|.+|.+.++.|.+|.|+|+... ..+.   ..........+.+.+|+++ .|.|+|+|
T Consensus         3 ~~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-tY~~rV~A   81 (102)
T d2dtge1           3 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRA   81 (102)
T ss_dssp             CCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCE
T ss_pred             CCCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEecccee-eEEEEEEE
Confidence            3556665 667777889999999999877888999999998322 2111   1123345567899999997 59999999


Q ss_pred             EcCCcCCCCCCceEeecCC
Q psy9139         101 VNSIGESKPSKTIAASTKG  119 (197)
Q Consensus       101 ~~~~g~~~~s~~~~~~t~~  119 (197)
                      .|..|.|.+|..+.+.+++
T Consensus        82 ~n~~G~g~~S~~v~f~~~e  100 (102)
T d2dtge1          82 TSLAGNGSWTEPTYFYVTD  100 (102)
T ss_dssp             EETTBCCCCCCCCEECCCC
T ss_pred             EcCCccCCCCCCEEEEccC
Confidence            9999999999988887754

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.9e-12  Score=74.97  Aligned_cols=86  Identities=14%  Similarity=0.207  Sum_probs=55.6

Q ss_pred             CCCCCE-EEEEeecCCeEEEEeeeCCCCCc---cccEEEEEEEe-CCCCcE-EEEe--CCcccEEEECCCCCCCEEEEEE
Q psy9139          27 PPGVPN-ILLQSTTTHSISILWKPSYDGGA---IITHYIVSYRD-RTEDWQ-SVHV--DAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        27 ~P~~p~-~~~~~~~~~~~~l~W~~~~~~~~---~i~~y~v~~~~-~~~~~~-~~~~--~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      .|.+|. +.+...+.+++.|.|.+|...+.   ....|.++++. ....|. ....  ......+++.+|.|++.|.|+|
T Consensus         1 kP~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV   80 (101)
T d1iarb2           1 KPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARV   80 (101)
T ss_dssp             CCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEE
T ss_pred             CcccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEE
Confidence            488887 88888899999999998763332   24568999873 333343 2222  3445678899999999999999


Q ss_pred             EEEcCCcCCCCCCc
Q psy9139          99 KLVNSIGESKPSKT  112 (197)
Q Consensus        99 ~a~~~~g~~~~s~~  112 (197)
                      +|.+..|.|.+|+.
T Consensus        81 rA~~~~g~g~wSew   94 (101)
T d1iarb2          81 RAWAQAYNTTWSEW   94 (101)
T ss_dssp             EEECGGGTCCCCCC
T ss_pred             EEEcCCCCCCCcCC
Confidence            99999998776653

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.9e-12  Score=79.64  Aligned_cols=87  Identities=17%  Similarity=0.199  Sum_probs=66.7

Q ss_pred             EEEEeecCCeEEEEeeeCCCCC---------ccccEEEEEEEeC--CCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          33 ILLQSTTTHSISILWKPSYDGG---------AIITHYIVSYRDR--TEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~---------~~i~~y~v~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      ..+..++.+++.|.|.+|...+         ..+..|.+.+...  ...|..+ .......++|.+|+|++.|.|+|+|.
T Consensus        24 P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~P~t~Y~f~V~A~  102 (137)
T d1wk0a_          24 PVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-YVGEETNITLNDLKPAMDYHAKVQAE  102 (137)
T ss_dssp             CEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-EEESCSEEEECSCCTTCEECEEEEEE
T ss_pred             CEEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCCCccEEEE-EecCccEEEECCCCCCcEEEEEEEEE
Confidence            4567789999999999875221         1466788888732  3344443 34567789999999999999999999


Q ss_pred             cCCcCCCCCCceEeecCCC
Q psy9139         102 NSIGESKPSKTIAASTKGE  120 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~t~~~  120 (197)
                      |..|.+.++....++|...
T Consensus       103 n~~G~g~~S~~~~~~T~~~  121 (137)
T d1wk0a_         103 YNSIKGTPSEAEIFTTLSC  121 (137)
T ss_dssp             ETTEECCCCCCCCEECCCS
T ss_pred             cCCcccCCCCCEEEECCCC
Confidence            9999999988887877543

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=6e-11  Score=71.01  Aligned_cols=93  Identities=17%  Similarity=0.172  Sum_probs=65.8

Q ss_pred             CCCCCCE-EEEEee-cCCeEEEEeeeCC-CCCccccEEEEEEEeCCCCc--EEEEeCCcccEEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPN-ILLQST-TTHSISILWKPSY-DGGAIITHYIVSYRDRTEDW--QSVHVDAEYREFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~-~~~~~~-~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..|+||. +.+... ....+.+.|.+|. .....+..|.|+|+..+..+  .........+.+.|.+|.|++.|.|+|+|
T Consensus         3 Vk~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRa   82 (105)
T d1erna2           3 VLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA   82 (105)
T ss_dssp             BCCCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred             cccCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEEeecCCccEEEEeCCCCCcEEEEEEEE
Confidence            5688997 666654 3456999999875 44455778999998543332  33444566788999999999999999999


Q ss_pred             EcCC----c-CCCCCCceEeecC
Q psy9139         101 VNSI----G-ESKPSKTIAASTK  118 (197)
Q Consensus       101 ~~~~----g-~~~~s~~~~~~t~  118 (197)
                      .+..    | .|.+|..+.+.|+
T Consensus        83 r~~~~~~~G~WSeWS~~v~~~tP  105 (105)
T d1erna2          83 RMAEPSFGGFWSAWSEPVSLLTP  105 (105)
T ss_dssp             EECSSSCCBCCCCCCCCEEEECC
T ss_pred             EECCCCCCCCCCCCCCCEEeeCc
Confidence            8543    2 2566766777663

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.3e-12  Score=78.20  Aligned_cols=88  Identities=20%  Similarity=0.360  Sum_probs=64.6

Q ss_pred             CCCC-CCEEEEEeecCCeEEEEeeeC--CCCCccccEEEEEEEeCCC-CcEEEEeCCcccEEEECCCCCCCEEEEEEEEE
Q psy9139          26 SPPG-VPNILLQSTTTHSISILWKPS--YDGGAIITHYIVSYRDRTE-DWQSVHVDAEYREFTLTQLKCGTHYKINIKLV  101 (197)
Q Consensus        26 ~~P~-~p~~~~~~~~~~~~~l~W~~~--~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~  101 (197)
                      .+|. +|.+.+...+.+++.|.|.++  .+.++.+.+|+|+|+.... .|.....   ...+.+.+|.+++.|.|+|+|.
T Consensus        16 ~~P~~pp~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~~---~~~~~~~~L~p~t~Y~~~V~A~   92 (117)
T d1wj3a_          16 TPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT---NKTSAELVLPIKEDYIIEVKAT   92 (117)
T ss_dssp             CCCCCCCCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEEE---SSSEEEEECCCSSCEEEEEEEE
T ss_pred             CCcCCCCcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeeec---eeeEEEeeccCCcEEEEEEEEE
Confidence            4454 445445567789999999974  4566789999999985433 3433322   2345667899999999999999


Q ss_pred             cCCcCCCCCCceEee
Q psy9139         102 NSIGESKPSKTIAAS  116 (197)
Q Consensus       102 ~~~g~~~~s~~~~~~  116 (197)
                      |..|.+.++..+.+.
T Consensus        93 n~~G~G~~S~~v~v~  107 (117)
T d1wj3a_          93 TDGGDGTSSEQIRIP  107 (117)
T ss_dssp             ESSCCCCBCCCEEEC
T ss_pred             cCCccCCCCCCEEEe
Confidence            999999988876653

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.3e-11  Score=71.98  Aligned_cols=94  Identities=14%  Similarity=0.171  Sum_probs=67.8

Q ss_pred             CCCCCCE-EEEEeecCCeEEEEeeeCCCCC------ccccEEEEEEEeCCCC---cEEEEeCCcccEEEECCCCCCCEEE
Q psy9139          26 SPPGVPN-ILLQSTTTHSISILWKPSYDGG------AIITHYIVSYRDRTED---WQSVHVDAEYREFTLTQLKCGTHYK   95 (197)
Q Consensus        26 ~~P~~p~-~~~~~~~~~~~~l~W~~~~~~~------~~i~~y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~~~y~   95 (197)
                      ..|.+|. +.+ ....+++.|+|.+|...+      ..+..|.++++.....   +...........+.+.+|.|++.|.
T Consensus         4 vkP~pP~nl~v-~~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~   82 (114)
T d2gysa2           4 VQPPEPRDLQI-STDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYV   82 (114)
T ss_dssp             BCCCCCEEEEE-EEETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTTCCTTCEEE
T ss_pred             ccCCcCCCeEE-EEeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceEEEEeCCCCCCcEEE
Confidence            4689998 765 466789999999985321      2345689998854332   3333445666788999999999999


Q ss_pred             EEEEEEcCCcC------CCCCCceEeecCCC
Q psy9139          96 INIKLVNSIGE------SKPSKTIAASTKGE  120 (197)
Q Consensus        96 ~~v~a~~~~g~------~~~s~~~~~~t~~~  120 (197)
                      |+|+|.+..|.      +.+|..+.+.|++.
T Consensus        83 ~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg  113 (114)
T d2gysa2          83 ARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG  113 (114)
T ss_dssp             EEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred             EEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence            99999998875      45677788877653

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=2.8e-11  Score=72.78  Aligned_cols=88  Identities=18%  Similarity=0.208  Sum_probs=63.0

Q ss_pred             CCCCCCE-EEEE-eecCCeEEEEeeeCCCCCccccEEEEEEE-eC----CCCcEE--EEe--CCcccEEEECCCCCCCEE
Q psy9139          26 SPPGVPN-ILLQ-STTTHSISILWKPSYDGGAIITHYIVSYR-DR----TEDWQS--VHV--DAEYREFTLTQLKCGTHY   94 (197)
Q Consensus        26 ~~P~~p~-~~~~-~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~----~~~~~~--~~~--~~~~~~~~i~~L~p~~~y   94 (197)
                      .||++|. +.+. ....+++.++|.++.+++.++ .|.+.+. ..    ...+..  ...  ......+++.+|.+++.|
T Consensus         3 ~PP~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~-~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y   81 (107)
T d1cd9b1           3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPT-SFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM   81 (107)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCC-EEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred             CccCCCcCCEEEEecCCCEEEEEEcCCCCCCCCc-ceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceE
Confidence            5899998 7754 567889999999998888775 4665554 21    122222  221  244667889999999999


Q ss_pred             EEEEEEEcCCcCCCCCCceEe
Q psy9139          95 KINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        95 ~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      .|+|.|.|..|.+. +..+.+
T Consensus        82 ~frV~A~N~~G~s~-S~~~~~  101 (107)
T d1cd9b1          82 AIWVQAENMLGSSE-SPKLCL  101 (107)
T ss_dssp             EEEEEEEETTEEEE-CCCEEE
T ss_pred             EEEEEEEeCCcccc-CCCEEc
Confidence            99999999999875 334433

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.7e-11  Score=72.92  Aligned_cols=81  Identities=14%  Similarity=0.267  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCC----------CCcEEEEeCCcccEEEECCCCCCCEEEE
Q psy9139          27 PPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRT----------EDWQSVHVDAEYREFTLTQLKCGTHYKI   96 (197)
Q Consensus        27 ~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~----------~~~~~~~~~~~~~~~~i~~L~p~~~y~~   96 (197)
                      ||.+..+.+...+.+++.|.|.++.   +.+.+|.|++....          ..+....+.....+++|.+|+|++.|.|
T Consensus         4 Pp~~~~l~v~~~t~~sv~v~W~pp~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~   80 (101)
T d2cuia1           4 RPRLSQLSVTDVTTSSLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSL   80 (101)
T ss_dssp             CCCCCCCEEESCCSSCEEEECCCCT---TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred             ccCCCCcEEEEECCCEEEEEEEecc---ccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEE
Confidence            4433449999999999999998764   35788999988321          1123344566788999999999999999


Q ss_pred             EEEEEcCCcCCCCC
Q psy9139          97 NIKLVNSIGESKPS  110 (197)
Q Consensus        97 ~v~a~~~~g~~~~s  110 (197)
                      +|.|.+..|.+.++
T Consensus        81 ~V~a~~~~g~g~~~   94 (101)
T d2cuia1          81 TLYGLRGPHKADSI   94 (101)
T ss_dssp             EEEEECSSSEEEEE
T ss_pred             EEEEEeCCcEeCCe
Confidence            99999999987654

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1e-10  Score=70.42  Aligned_cols=91  Identities=18%  Similarity=0.329  Sum_probs=63.8

Q ss_pred             CCCCCCE-EEEEe--ecCCeEEEEeeeCCC---CCccccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEE
Q psy9139          26 SPPGVPN-ILLQS--TTTHSISILWKPSYD---GGAIITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINI   98 (197)
Q Consensus        26 ~~P~~p~-~~~~~--~~~~~~~l~W~~~~~---~~~~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v   98 (197)
                      ..|+||. +.+..  .+.+++.|.|.+|..   .......|.++++. ....|..+. ....+.++|.+|.+++.|.|+|
T Consensus         6 VkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~~~t~Y~~rV   84 (109)
T d1uc6a_           6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE-LSNGTAHTITDAYAGKEYIIQV   84 (109)
T ss_dssp             CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE-ESSCSEEEETTCCSSSCEEEEE
T ss_pred             EECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEec-cCCceeEEeCCCCCCCEEEEEE
Confidence            4689997 66544  357889999999752   22335678898873 455666555 3456789999999999999999


Q ss_pred             EEEcCCcC--CCCCCceEeec
Q psy9139          99 KLVNSIGE--SKPSKTIAAST  117 (197)
Q Consensus        99 ~a~~~~g~--~~~s~~~~~~t  117 (197)
                      +|.+..+.  +.+|..+...+
T Consensus        85 rA~~~~~g~wS~WS~~~~~tt  105 (109)
T d1uc6a_          85 AAKDNEIGTWSDWSVAAHATP  105 (109)
T ss_dssp             ECCBSSSCCCCCCCEEEEECC
T ss_pred             EEEECCCCCcCCCCCCEEeEC
Confidence            99875421  45555555443

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=3.6e-12  Score=78.02  Aligned_cols=91  Identities=23%  Similarity=0.359  Sum_probs=62.1

Q ss_pred             CCCCCCE-EEEEe-ecCCeEEEEeeeCCC-C-----CccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEE
Q psy9139          26 SPPGVPN-ILLQS-TTTHSISILWKPSYD-G-----GAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKIN   97 (197)
Q Consensus        26 ~~P~~p~-~~~~~-~~~~~~~l~W~~~~~-~-----~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~   97 (197)
                      .+|.+|. +.+.. .+..++.|+|.++.. .     +..+.+|.+.+. ....+.......+.+.++|.+|++++.|.|+
T Consensus         9 ~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~-~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~v~   87 (117)
T d2cspa1           9 GPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAK-GQRVAEVIFPTADSTAVELVRLRSLEAKGVT   87 (117)
T ss_dssp             CCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESS-SSEEEEECCTTCSEEEEESHHHHHHTCSCBE
T ss_pred             CCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEee-cccceeeeeeccceeeeeccCCCCCcEEEEE
Confidence            5678887 66644 566799999998742 1     233445544321 1111122223455667889999999999999


Q ss_pred             EEEEcCCcCCCCCCceEeec
Q psy9139          98 IKLVNSIGESKPSKTIAAST  117 (197)
Q Consensus        98 v~a~~~~g~~~~s~~~~~~t  117 (197)
                      |+|.|..|.|..|..+.+.+
T Consensus        88 V~A~n~~G~s~~S~~v~i~t  107 (117)
T d2cspa1          88 VRTLSAQGESVDSAVAAVPP  107 (117)
T ss_dssp             EEEEESSCCCCCCSCBCCCH
T ss_pred             EEEEcCCCcCCCCCCEEeeC
Confidence            99999999998888766654

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.4e-11  Score=76.21  Aligned_cols=86  Identities=19%  Similarity=0.309  Sum_probs=64.3

Q ss_pred             EEEEeecCCeEEEEeeeCC-CCCccccEEEEEEEeC-C--------------CCcEEE----------EeCCcccEEEEC
Q psy9139          33 ILLQSTTTHSISILWKPSY-DGGAIITHYIVSYRDR-T--------------EDWQSV----------HVDAEYREFTLT   86 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~-~~~~~i~~y~v~~~~~-~--------------~~~~~~----------~~~~~~~~~~i~   86 (197)
                      +.+...++++|.|.|++|. ..++.|.+|.|.|+.. .              ..|...          ........++|.
T Consensus         8 l~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (125)
T d2dtge3           8 FSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMR   87 (125)
T ss_dssp             CSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEEC
T ss_pred             EEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCEEEEC
Confidence            7788899999999999986 3346789999998621 1              112211          123456789999


Q ss_pred             CCCCCCEEEEEEEEEcCCcC-----CCCCCceEeecC
Q psy9139          87 QLKCGTHYKINIKLVNSIGE-----SKPSKTIAASTK  118 (197)
Q Consensus        87 ~L~p~~~y~~~v~a~~~~g~-----~~~s~~~~~~t~  118 (197)
                      +|.|++.|.|+|.|.|..|.     |..|..+.++|.
T Consensus        88 ~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~  124 (125)
T d2dtge3          88 GLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD  124 (125)
T ss_dssp             SCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred             CCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence            99999999999999999995     556777777664

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.9e-10  Score=68.09  Aligned_cols=80  Identities=18%  Similarity=0.272  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCc-cccEEEEEEEeCCCCcE--EEEeCCcccEEEECCCCCCCEEEEEEEEEc
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGA-IITHYIVSYRDRTEDWQ--SVHVDAEYREFTLTQLKCGTHYKINIKLVN  102 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~-~i~~y~v~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~  102 (197)
                      .++.||.+.+.. +.+++.|.|.+|....+ .+..|.|+++.....|.  ........+.++|.+|+|++.|.|+|+|.+
T Consensus         4 Vk~~Pp~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rVRa~~   82 (100)
T d2gysa4           4 IQMAPPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRT   82 (100)
T ss_dssp             BCCCCCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEEE
T ss_pred             ccCCCCccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeecccCCceEEEeCCCCCCCeEEEEEEEEE
Confidence            467788766554 55789999999864333 46689999984333322  222234567899999999999999999998


Q ss_pred             CCcC
Q psy9139         103 SIGE  106 (197)
Q Consensus       103 ~~g~  106 (197)
                      ..|.
T Consensus        83 ~~g~   86 (100)
T d2gysa4          83 SRTG   86 (100)
T ss_dssp             CCTT
T ss_pred             CCCC
Confidence            7663

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.8e-09  Score=63.51  Aligned_cols=84  Identities=13%  Similarity=0.157  Sum_probs=55.7

Q ss_pred             CCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEE-E-EeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          28 PGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQS-V-HVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        28 P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~-~-~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      |.|.++.+..... ...|.|++|.+.++.+..|.+... .....|.. + ........+++.+|.++..|.|||+|.|..
T Consensus         2 P~P~nv~v~s~n~-~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~n~~   80 (98)
T d1fyhb1           2 PTPTNVTIESYNM-NPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKARVGQ   80 (98)
T ss_dssp             CCCEEEEEECBSS-CCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEEETT
T ss_pred             ccCCceEEEEeCC-cEEEEECCCCCCCCCceeEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEEcCC
Confidence            5333477766654 456999998755555433333332 22233322 2 244556677888999999999999999999


Q ss_pred             cCCCCCCc
Q psy9139         105 GESKPSKT  112 (197)
Q Consensus       105 g~~~~s~~  112 (197)
                      |.|.++..
T Consensus        81 g~S~ws~s   88 (98)
T d1fyhb1          81 KESAYAKS   88 (98)
T ss_dssp             EECCCEEC
T ss_pred             cccCCccC
Confidence            99887654

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.7e-09  Score=61.75  Aligned_cols=84  Identities=17%  Similarity=0.264  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEEe--CCccc--EEEECCCCCCCEEEEEEEE
Q psy9139          26 SPPGVPNILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVHV--DAEYR--EFTLTQLKCGTHYKINIKL  100 (197)
Q Consensus        26 ~~P~~p~~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~~--~~~~~--~~~i~~L~p~~~y~~~v~a  100 (197)
                      ..|.|+.+.+. .......|.|+++.+.+.. ..|.|+++. ....|..+..  .....  .+.+.+|.++..|.|||+|
T Consensus         3 ~lP~P~nv~~~-s~n~~~~L~W~pp~~~g~~-~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA   80 (99)
T d1y6kr1           3 ELPSPPSVWFE-AEFFHHILHWTPIPQQSES-TCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   80 (99)
T ss_dssp             CCCCCSCEEEE-EETTEEEEEECCCTTCCTT-CEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             cCCCCCcceEE-EECCEEEEEEcCCCCcCCC-CEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEE
Confidence            35767767764 3445688999987654443 569999984 5677987642  22222  2356789999999999999


Q ss_pred             EcCCcCCCCCC
Q psy9139         101 VNSIGESKPSK  111 (197)
Q Consensus       101 ~~~~g~~~~s~  111 (197)
                      .|..|.+.++.
T Consensus        81 ~n~~g~S~Ws~   91 (99)
T d1y6kr1          81 VDGSRHSQWTV   91 (99)
T ss_dssp             EETTEECCCEE
T ss_pred             EcCCCcCCCcc
Confidence            99999888754

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.4e-08  Score=59.02  Aligned_cols=84  Identities=11%  Similarity=0.190  Sum_probs=52.9

Q ss_pred             CCCCCE-EEEEee-cCCeEEEEeeeCCCCCc----cccEEEEEEEe-CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEE
Q psy9139          27 PPGVPN-ILLQST-TTHSISILWKPSYDGGA----IITHYIVSYRD-RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIK   99 (197)
Q Consensus        27 ~P~~p~-~~~~~~-~~~~~~l~W~~~~~~~~----~i~~y~v~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~   99 (197)
                      .|+||. +.+... .+..+.|+|++|.....    ....|.|+|+. ....|....... .+.   ..|.|++.|.|+|+
T Consensus         1 KPdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~~-~t~---~~L~p~~~Y~v~VR   76 (94)
T d3d85d3           1 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTD-KTS---ATVICRKNASISVR   76 (94)
T ss_dssp             CCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEES-SSE---EEECCCSSCEEEEE
T ss_pred             CCCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecccc-ceE---EEecCCCCEEEEEE
Confidence            488997 776654 34679999999863221    24669999984 444555444322 222   34789999999999


Q ss_pred             EEcCCcCCCCCCceE
Q psy9139         100 LVNSIGESKPSKTIA  114 (197)
Q Consensus       100 a~~~~g~~~~s~~~~  114 (197)
                      |.+..+.|.+|+...
T Consensus        77 a~~~~~~g~WSeWS~   91 (94)
T d3d85d3          77 AQDRYYSSSWSEWAS   91 (94)
T ss_dssp             EEESSSCCCCCCCEE
T ss_pred             EecCCCCCCCccCcC
Confidence            999888887776543

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=5e-08  Score=59.32  Aligned_cols=41  Identities=15%  Similarity=0.095  Sum_probs=36.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNG  178 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~  178 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+......|.++
T Consensus        74 ~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~  114 (120)
T d1ujta_          74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE  114 (120)
T ss_dssp             CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred             eeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCC
Confidence            55799999999999999999999999999877776777665

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=4.1e-08  Score=60.04  Aligned_cols=44  Identities=16%  Similarity=0.175  Sum_probs=37.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...+.|.+|.|++.|.|+|+|.|..|.|+.+..+...|.++.++
T Consensus        79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  122 (125)
T d1uena_          79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCCcC
Confidence            45799999999999999999999999999777676777666554

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=6.2e-08  Score=56.23  Aligned_cols=38  Identities=16%  Similarity=0.175  Sum_probs=33.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+.+.|
T Consensus        54 ~t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T   91 (94)
T d1x5aa1          54 EPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT   91 (94)
T ss_dssp             SSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEEC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEe
Confidence            44799999999999999999999999999777666665

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=4.3e-08  Score=59.49  Aligned_cols=45  Identities=16%  Similarity=0.190  Sum_probs=37.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAF  182 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~  182 (197)
                      ...+.|.+|+|++.|.|+|+|+|..|.|+.+..+...|.++.+.+
T Consensus        69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~~~~  113 (119)
T d1x5ha1          69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDE  113 (119)
T ss_dssp             CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCC
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCCCCC
Confidence            557999999999999999999999999987766666776655443

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=5e-08  Score=57.01  Aligned_cols=39  Identities=21%  Similarity=0.301  Sum_probs=33.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...|+|.+|.|++.|.|+|+|.|.+|.|+.+......|.
T Consensus        57 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~   95 (97)
T d2crza1          57 EVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA   95 (97)
T ss_dssp             CSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECC
T ss_pred             ceEEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeC
Confidence            457999999999999999999999999997766655543

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=4.3e-08  Score=61.05  Aligned_cols=45  Identities=13%  Similarity=0.177  Sum_probs=36.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKAF  182 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~~  182 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|+.+..+...|....+.+
T Consensus        81 ~~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~P~~  125 (137)
T d1wk0a_          81 ETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDI  125 (137)
T ss_dssp             CSEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCC
T ss_pred             ccEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCCCCC
Confidence            557999999999999999999999999987665555665555443

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.1e-07  Score=54.75  Aligned_cols=39  Identities=18%  Similarity=0.261  Sum_probs=33.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|+.+..+...|.
T Consensus        53 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~   91 (92)
T d1qg3a1          53 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH   91 (92)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             ccEEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence            457999999999999999999999999998776655553

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=7.4e-08  Score=56.85  Aligned_cols=40  Identities=20%  Similarity=0.211  Sum_probs=33.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...|.|.+|+|++.|.|+|+|+|..|.|+.+..+...|++
T Consensus        63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~e  102 (103)
T d1x5ga1          63 SHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS  102 (103)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCC
T ss_pred             ccEEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcCC
Confidence            4579999999999999999999999999876655555544

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.3e-08  Score=56.28  Aligned_cols=39  Identities=23%  Similarity=0.422  Sum_probs=33.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...|+|.+|+|++.|.|+|+|.|..|.|+++..+...|+
T Consensus        56 ~~~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~   94 (96)
T d1x5xa1          56 DLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTC   94 (96)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECC
T ss_pred             CCEEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeC
Confidence            457999999999999999999999999987766655553

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=6.9e-08  Score=56.04  Aligned_cols=39  Identities=18%  Similarity=0.195  Sum_probs=33.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...+.+.+|+|++.|.|+|+|.|.+|.|+.+..+...|+
T Consensus        55 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~   93 (95)
T d2djsa1          55 TNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTL   93 (95)
T ss_dssp             SSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECC
T ss_pred             ccEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeC
Confidence            457999999999999999999999999987666555554

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=1.2e-07  Score=57.58  Aligned_cols=40  Identities=20%  Similarity=0.314  Sum_probs=33.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVN  177 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~  177 (197)
                      ...|+|.+|+|++.|.|+|+|.|.+|.|+.+..+...+..
T Consensus        74 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~  113 (120)
T d1wfua_          74 ATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTR  113 (120)
T ss_dssp             CSEEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCC
T ss_pred             ccEEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCC
Confidence            4579999999999999999999999999876656555543

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=2.5e-07  Score=55.82  Aligned_cols=37  Identities=14%  Similarity=0.076  Sum_probs=31.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      ...+.+.+|.+++.|.|+|+|+|.+|.|+.+..+.+.
T Consensus        71 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~  107 (117)
T d1wj3a_          71 NKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIP  107 (117)
T ss_dssp             SSSEEEEECCCSSCEEEEEEEEESSCCCCBCCCEEEC
T ss_pred             eeeEEEeeccCCcEEEEEEEEEcCCccCCCCCCEEEe
Confidence            3457888999999999999999999999977665443

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.5e-07  Score=56.80  Aligned_cols=38  Identities=16%  Similarity=0.218  Sum_probs=32.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|++.+|+|++.|.|+|+|+|.+|.|+.+..+...|
T Consensus        77 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT  114 (117)
T d1wfoa1          77 ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT  114 (117)
T ss_dssp             CCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred             eEEEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence            56799999999999999999999999999776655444

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.2e-07  Score=53.67  Aligned_cols=38  Identities=26%  Similarity=0.306  Sum_probs=33.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|+.+..+...|
T Consensus        53 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~T   90 (93)
T d1x4xa1          53 GLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVT   90 (93)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEEC
T ss_pred             ccEEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEe
Confidence            55799999999999999999999999999776665554

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=1.6e-07  Score=54.92  Aligned_cols=31  Identities=16%  Similarity=0.254  Sum_probs=28.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|++++|.+++.|.|+|+|.|..|.|+++
T Consensus        58 ~~~~~v~~L~~~~~Y~frV~A~n~~G~s~~s   88 (98)
T d1x5ya1          58 RCGFTVKDLPTGARILFRVVGVNIAGRSEPA   88 (98)
T ss_dssp             SSEEEEECCCTTCCEEEEEEEEETTEECCCC
T ss_pred             eeEEEECCCcCCeEEEEEEEEECCCcCCCCc
Confidence            5689999999999999999999999999854

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.4e-07  Score=55.21  Aligned_cols=38  Identities=21%  Similarity=0.227  Sum_probs=33.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|.|.+|+|++.|.|+|+|.|..|.|+.+..+...|
T Consensus        71 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T  108 (111)
T d1x5ka1          71 RLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT  108 (111)
T ss_dssp             CSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred             eeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEC
Confidence            55799999999999999999999999999776665554

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.8e-07  Score=54.90  Aligned_cols=37  Identities=24%  Similarity=0.223  Sum_probs=31.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~  174 (197)
                      ...+++.+|.|++.|.|+|+|.|.+|.|+.+......
T Consensus        61 ~~~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~   97 (101)
T d2haza1          61 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK   97 (101)
T ss_dssp             HSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEE
T ss_pred             eeEEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEE
Confidence            4579999999999999999999999999976555443

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=3.8e-07  Score=53.72  Aligned_cols=34  Identities=26%  Similarity=0.352  Sum_probs=28.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS-TNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~  171 (197)
                      ...+++.+|+|++.|.|+|+|.|.+|. |+++...
T Consensus        59 ~~~~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s   93 (104)
T d1bpva_          59 ENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPS   93 (104)
T ss_dssp             SSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEEE
T ss_pred             eeEEEEcCCCCCCEEEEEEEEEECCCCCCCCcCCC
Confidence            567999999999999999999999997 5555433

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.1e-07  Score=54.34  Aligned_cols=38  Identities=21%  Similarity=0.349  Sum_probs=32.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|+|.+|+|++.|.|+|+|.|.+|.|+.+..+...|
T Consensus        58 ~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T   95 (98)
T d1x5la1          58 TTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVET   95 (98)
T ss_dssp             SSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEEC
T ss_pred             ceEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEc
Confidence            45799999999999999999999999999766665554

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.8e-07  Score=55.05  Aligned_cols=39  Identities=13%  Similarity=0.254  Sum_probs=33.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...|.|.+|+|++.|.|+|+|+|..|.|+.+..+...|+
T Consensus        62 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~  100 (102)
T d1x5za1          62 GTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM  100 (102)
T ss_dssp             SSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECC
T ss_pred             cCEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcC
Confidence            447999999999999999999999999987766655554

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=4.9e-07  Score=53.58  Aligned_cols=38  Identities=34%  Similarity=0.510  Sum_probs=32.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...+++.+|.|++.|.|+|+|.|..|.|+.+..+...|
T Consensus        67 ~~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T  104 (107)
T d1x5fa1          67 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVET  104 (107)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEEC
T ss_pred             ccEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEEC
Confidence            56899999999999999999999999998766665554

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.5e-07  Score=54.93  Aligned_cols=39  Identities=18%  Similarity=0.262  Sum_probs=33.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...+.|.+|+|++.|.|+|+|+|..|.|+.+..+...|+
T Consensus        70 ~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~  108 (109)
T d1va9a1          70 SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL  108 (109)
T ss_dssp             EEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred             eeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence            568999999999999999999999999997766655554

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.9e-07  Score=54.63  Aligned_cols=39  Identities=15%  Similarity=0.270  Sum_probs=32.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...++|.||.|++.|.|+|+|.|..|.|+.+..+...|.
T Consensus        60 ~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~   98 (100)
T d1x5ja1          60 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF   98 (100)
T ss_dssp             SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence            457999999999999999999999999997665555443

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=98.30  E-value=5.6e-07  Score=51.33  Aligned_cols=36  Identities=25%  Similarity=0.369  Sum_probs=30.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCC-CCCcceEEEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAG-STNKNYVFAT  173 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G-~~~~~~~~~t  173 (197)
                      ...|++.+|.|++.|.|+|+|+|..| .|+.+..+..
T Consensus        50 ~t~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~v   86 (88)
T d1k85a_          50 GTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSV   86 (88)
T ss_dssp             SSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEE
T ss_pred             CCEEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEE
Confidence            45799999999999999999999999 5776655433

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.30  E-value=4.5e-07  Score=52.48  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=28.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|.|.+|+|++.|.|+|+|+|..|.|+.|
T Consensus        64 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S   94 (95)
T d2ibga1          64 ARSFKIAPLETATMYEFKLQSFSAASASEFS   94 (95)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred             eeEEEEeeccCCeEEEEEEEEEeCCccCCCC
Confidence            5579999999999999999999999999864

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.2e-07  Score=53.03  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=30.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...|+|.+|.|++.|.|+|+|+|..|.|+++...
T Consensus        54 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~   87 (94)
T d2dn7a1          54 DQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKE   87 (94)
T ss_dssp             CCEEEEECCCTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred             ccEEEEEccCCeeEEEEEEEEEcCCcCCCCccEE
Confidence            4579999999999999999999999999876544

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.5e-07  Score=56.85  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=28.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|+|.+|+|++.|.|+|+|.|..|.|+++.
T Consensus        71 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~  102 (117)
T d1uema_          71 TTLYTVRGLRPNTIYLFMVRAINPQGLSDPSP  102 (117)
T ss_dssp             SSEEEECSCCTTCEEEEEEEEEETTEEEEECC
T ss_pred             cccceECCCCCCCEEEEEEEEEeCCcCCCCcC
Confidence            45799999999999999999999999988543

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.26  E-value=8.1e-07  Score=52.40  Aligned_cols=33  Identities=24%  Similarity=0.323  Sum_probs=29.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...++|.+|++++.|.|+|+|.|.+|.|+.+..
T Consensus        63 ~~~~~i~~L~p~t~Y~~~V~A~N~~G~gp~S~~   95 (105)
T d1cfba2          63 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAE   95 (105)
T ss_dssp             CCEEEECSCCSSCEEEEEEEEEETTEECSSCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCcCCCCCCC
Confidence            457999999999999999999999999986543

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.2e-07  Score=55.08  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...|.+.+|+|++.|.|+|+|.|..|.|+.+..+
T Consensus        67 ~~~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v  100 (107)
T d2crma1          67 TREHLCDRLNPGCFYRLRVYCISDGGQSAVSESL  100 (107)
T ss_dssp             CSEEEECSCCTTSCEEEEEEEEETTEECCCCCCC
T ss_pred             ccEEEEeccCCCCEEEEEEEEECCCcCcCCCCcE
Confidence            5579999999999999999999999999876544

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=7.1e-07  Score=51.42  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=29.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|+|.+|+|++.|.|+|+|.|..|.|+++.
T Consensus        55 ~~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~   86 (93)
T d2vkwa2          55 SDHVMLKSLDWNAEYEVYVVAENQQGKSKAAH   86 (93)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ceEEEEeccccceEEEEEEEEEcCCCCcCCEe
Confidence            55799999999999999999999999999753

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=9.2e-07  Score=51.90  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=29.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS-TNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~~t~~  175 (197)
                      ...++|.+|++++.|.|+|+|.|..|. |+.+..+...+
T Consensus        64 ~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~t  102 (104)
T d3d48r2          64 QTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI  102 (104)
T ss_dssp             CSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEEC
Confidence            457999999999999999999999997 88766554443

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=9.5e-07  Score=52.07  Aligned_cols=29  Identities=28%  Similarity=0.303  Sum_probs=26.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTN  166 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~  166 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|.
T Consensus        63 ~~~~~i~~L~p~t~Y~frVra~n~~g~G~   91 (105)
T d2d9qb2          63 ALQYELCGLLPATAYTLQIRCIRWPLPGH   91 (105)
T ss_dssp             EEEEEECSCCSCCCEEEEEEEEECSSCCC
T ss_pred             cceeEEecccCCeEEEEEEEEEeCCCCCC
Confidence            55799999999999999999999999875

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=6.2e-07  Score=51.68  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=28.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|+|.||+|++.|.|+|.|.|..|.++..
T Consensus        55 ~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~   85 (93)
T d1owwa_          55 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVT   85 (93)
T ss_dssp             CCEEEECSCCSSEEEEEEEEEEESSSCEEEE
T ss_pred             ccEEEECCcccCcEEEEEEEEEeCCCccCcE
Confidence            5679999999999999999999999999854

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.6e-07  Score=54.97  Aligned_cols=32  Identities=25%  Similarity=0.490  Sum_probs=28.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus        68 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~   99 (108)
T d1wf5a1          68 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK   99 (108)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEESSCEEEECC
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence            55799999999999999999999999988654

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.9e-07  Score=52.99  Aligned_cols=38  Identities=24%  Similarity=0.315  Sum_probs=32.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|.+.+|.|++.|.|+|+|.|..|.|+++..+...|
T Consensus        65 ~~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T  102 (105)
T d1x3da1          65 QKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT  102 (105)
T ss_dssp             CSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEEC
T ss_pred             ccEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEEC
Confidence            55799999999999999999999999999766554444

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=7.9e-07  Score=52.52  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=30.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...|.|.+|.|++.|.|+|+|+|..|.|+.+...
T Consensus        66 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~   99 (106)
T d1wfna1          66 TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST   99 (106)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred             eeEEEEccCCCCCEEEEEEEEECCCCCcCCcCCE
Confidence            4579999999999999999999999999866544

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.21  E-value=4e-07  Score=53.99  Aligned_cols=31  Identities=16%  Similarity=0.318  Sum_probs=28.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+.+
T Consensus        67 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S   97 (107)
T d2ic2a1          67 SFTASVTDLKPQHTYRFRILAVYSNNDNKES   97 (107)
T ss_dssp             EEEEEECSCCSSEEEEEEEEEEETTSCEEEC
T ss_pred             eeEEEECCCcCCcEEEEEEEEEcCCCCCCCC
Confidence            5679999999999999999999999998743

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=6.7e-07  Score=52.39  Aligned_cols=32  Identities=28%  Similarity=0.516  Sum_probs=29.7

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCCCCCE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPPGVPN   32 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P~~p~   32 (197)
                      ++|.|+|.|.|..|..+.++.+.+...|++|.
T Consensus        67 D~G~Y~C~a~N~~G~~~~~~~l~V~~~P~pP~   98 (101)
T d2cqva1          67 HCGCYTLLVENKLGSRQAQVNLTVVDKPDPPA   98 (101)
T ss_dssp             TCEEEEEEEECSSCEEECCEEEEEECSCSCCC
T ss_pred             cCEEEEEEEEECCCEEEEEEEEEEEecCCCcC
Confidence            58999999999999999999999999999884

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=1.5e-06  Score=50.69  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=33.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|+.+..+...|
T Consensus        61 ~~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T   98 (101)
T d1x4ya1          61 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET   98 (101)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEEC
T ss_pred             eeEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEc
Confidence            45799999999999999999999999999777665554

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=3.6e-07  Score=55.64  Aligned_cols=39  Identities=15%  Similarity=0.062  Sum_probs=32.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~  176 (197)
                      ...+.|.+|+|++.|.|+|+|.|.+|.|+.+......+.
T Consensus        77 ~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~  115 (123)
T d1wfta_          77 QLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGN  115 (123)
T ss_dssp             HHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCS
T ss_pred             ccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEec
Confidence            456789999999999999999999999998776655553

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.2e-06  Score=49.94  Aligned_cols=33  Identities=24%  Similarity=0.365  Sum_probs=29.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYV  170 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~  170 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|+++..
T Consensus        52 ~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~~   84 (90)
T d1fnha1          52 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQG   84 (90)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             CeEEEEecccCceEEEEEEEEEeCCCCcCCEeE
Confidence            557999999999999999999999999996543

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.3e-06  Score=50.38  Aligned_cols=32  Identities=13%  Similarity=0.250  Sum_probs=29.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|+|.+|+|++.|.|+|+|.|..|.|++..
T Consensus        59 ~t~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~   90 (95)
T d2fnba_          59 VGYYTVTGLEPGIDYDISVITLINGGESAPTT   90 (95)
T ss_dssp             CSEEEECCCCTTSEEEEEEEEEETTEECCCCE
T ss_pred             CeEEEEecccCCEEEEEEEEEEeCCcEeCCEE
Confidence            56799999999999999999999999988654

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.1e-06  Score=51.45  Aligned_cols=34  Identities=32%  Similarity=0.413  Sum_probs=30.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~  171 (197)
                      ...++|.+|+|++.|.|+|+|.|.+|.|+++...
T Consensus        63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~   96 (103)
T d1qg3a2          63 NRMLLIENLRESQPYRYTVKARNGAGWGPEREAI   96 (103)
T ss_dssp             CCEEEECCCCTTCCEEEEEEEEETTEECCCEEEE
T ss_pred             ceEEEEeecCCCCEEEEEEEEEcCCccCCCcccc
Confidence            5579999999999999999999999999876543

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.9e-06  Score=49.27  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=28.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|+|.+|.|++.|.|+|.|.+..|.++.+
T Consensus        49 ~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~~~   79 (91)
T d1fnaa_          49 KSTATISGLKPGVDYTITVYAVTGRGDSPAS   79 (91)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECTTCCSSCS
T ss_pred             ccEEEeCCCCCCCEEEEEEEEEeCCccCCCc
Confidence            5579999999999999999999999998753

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=8e-07  Score=52.75  Aligned_cols=31  Identities=19%  Similarity=0.337  Sum_probs=28.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+++.+|.|++.|.|+|+|.|.+|.|+++
T Consensus        68 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S   98 (108)
T d1x4za1          68 RLSVEITGLEKGISYKFRVRALNMLGESEPS   98 (108)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEETTEECCCC
T ss_pred             ccEEEECCCCCCCEEEEEEEEECCCcCCCCC
Confidence            5579999999999999999999999998754

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=1.1e-06  Score=51.90  Aligned_cols=30  Identities=13%  Similarity=0.039  Sum_probs=27.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...|+|.+|.|++.|.|+|+|.|..|.|..
T Consensus        64 ~~~~~l~~L~p~t~Y~frVra~~~~g~g~w   93 (106)
T d1cd9b2          64 KDQFELCGLHQAPVYTLQMRCIRSSLPGFW   93 (106)
T ss_dssp             EEEEEECCCCSCSCEEEEEEEEESSSCCCC
T ss_pred             ceEEEEeccCCCeEEEEEEEEEeCCCCCCC
Confidence            567999999999999999999999998763

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=9.2e-07  Score=57.45  Aligned_cols=43  Identities=16%  Similarity=0.199  Sum_probs=33.2

Q ss_pred             eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC---CCceEeecC
Q psy9139          76 VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP---SKTIAASTK  118 (197)
Q Consensus        76 ~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~---s~~~~~~t~  118 (197)
                      ......+++|.+|.|++.|.|+|.|.|..|.+.+   +..+.++|.
T Consensus       150 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~  195 (196)
T d2dtge2         150 KVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM  195 (196)
T ss_dssp             EECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECC
T ss_pred             eccceEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCC
Confidence            3456678999999999999999999999988754   333445543

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2.9e-06  Score=48.74  Aligned_cols=32  Identities=19%  Similarity=0.292  Sum_probs=28.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+++.+|.|++.|.|+|+|.|..|.|.+..
T Consensus        54 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~   85 (94)
T d1j8ka_          54 EDTAELQGLRPGSEYTVSVVALHDDMESQPLI   85 (94)
T ss_dssp             CCEEEECSCCCCSEEEEEEEECSSSCCCCCEE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCCCcCCEE
Confidence            56899999999999999999999999988653

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=5.4e-07  Score=53.66  Aligned_cols=31  Identities=19%  Similarity=0.327  Sum_probs=28.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|.+.+|+|++.|.|+|+|.|.+|.|+++
T Consensus        71 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S  101 (111)
T d1wisa1          71 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPS  101 (111)
T ss_dssp             CSEEEECSCCTTSEECCCCEEECSSCBCCCC
T ss_pred             eeEEEeCCCCCCCEEEEEEEEEcCCcCCCCc
Confidence            5579999999999999999999999998754

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8.1e-07  Score=53.24  Aligned_cols=44  Identities=14%  Similarity=0.234  Sum_probs=34.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCC---cceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTN---KNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~---~~~~~~t~~~~~~~~  181 (197)
                      ...+.|.+|.+++.|.|+|+|.|..|.|.   .+......+.++.+.
T Consensus        64 ~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~~~P~  110 (115)
T d1bqua2          64 RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPS  110 (115)
T ss_dssp             CSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred             ccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCCCCCC
Confidence            55899999999999999999999999875   344455555555443

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=3.7e-06  Score=48.23  Aligned_cols=31  Identities=16%  Similarity=0.131  Sum_probs=28.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.|.+|.|++.|.|+|+|.|..|.|++.
T Consensus        52 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~   82 (93)
T d2cuma1          52 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPV   82 (93)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEBTTBCCCCE
T ss_pred             ccEEEEeCccCCCEEEEEEEEEeCCCCCCCE
Confidence            5579999999999999999999999998854

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.10  E-value=2.4e-06  Score=48.38  Aligned_cols=31  Identities=13%  Similarity=0.335  Sum_probs=28.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|+|.+|.|++.|.|+|+|.+..|.|++.
T Consensus        50 ~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~   80 (87)
T d1qr4a1          50 STSFILRGLDAGTEYTISLVAEKGRHKSKPT   80 (87)
T ss_dssp             CSEEEEESCCSSCEEEEEEEEESSSCBCCCE
T ss_pred             cCEEEECCCCcCCEEEEEEEEEcCCCCccCE
Confidence            5579999999999999999999999998854

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=4.3e-08  Score=59.37  Aligned_cols=44  Identities=11%  Similarity=-0.009  Sum_probs=34.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~~~~~~~  181 (197)
                      ...+.|.+|++++.|.|+|+|+|..|.|+.+..+...+....+.
T Consensus        70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~~~vP~  113 (117)
T d2cspa1          70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPP  113 (117)
T ss_dssp             EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCHHHHSCC
T ss_pred             eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeCCCCCCc
Confidence            55789999999999999999999999998776654444443443

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.09  E-value=2.6e-06  Score=48.72  Aligned_cols=31  Identities=23%  Similarity=0.342  Sum_probs=28.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|.|++.|.|+|+|.|..|.|++.
T Consensus        55 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~   85 (92)
T d1tdqa2          55 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPA   85 (92)
T ss_dssp             EEEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             eeEEEECCccCCCEEEEEEEEEeCCCEecCE
Confidence            5679999999999999999999999999865

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=2.3e-06  Score=50.21  Aligned_cols=30  Identities=17%  Similarity=0.211  Sum_probs=27.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...++|.+|.|++.|.|+|+|.|..|.|..
T Consensus        60 ~~~~~i~~L~p~t~Y~~rVra~n~~g~g~w   89 (104)
T d1n26a3          60 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEW   89 (104)
T ss_dssp             CSEEEESSCCTTCCEEEEEEEEETTTBSCC
T ss_pred             eEEEEECCCCCCCEEEEEEEEEeCCCccCC
Confidence            457999999999999999999999998764

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.07  E-value=3.8e-06  Score=49.14  Aligned_cols=36  Identities=17%  Similarity=0.267  Sum_probs=29.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC-CCcceEEEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS-TNKNYVFAT  173 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~-~~~~~~~~t  173 (197)
                      ...|.+.+|.+++.|.|+|+|.|..|. |+.+....+
T Consensus        64 ~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~  100 (103)
T d1f6fb2          64 QTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSV  100 (103)
T ss_dssp             CSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEE
T ss_pred             eeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceee
Confidence            457999999999999999999999996 776554433

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.07  E-value=9.2e-07  Score=51.62  Aligned_cols=31  Identities=16%  Similarity=0.268  Sum_probs=27.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.+.+|+|++.|.|+|+|.|.+|.|+++
T Consensus        61 ~~~~~~~~L~p~t~Y~frV~A~n~~G~g~~S   91 (100)
T d1cfba1          61 TDSSFVVQMSPWANYTFRVIAFNKIGASPPS   91 (100)
T ss_dssp             TCSEEEEECCSSEEEEEEEEEEETTEECCCC
T ss_pred             ceEEEEecCCCCCEEEEEEEEEeCCcCCCCc
Confidence            4468899999999999999999999999854

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=3.3e-06  Score=48.12  Aligned_cols=31  Identities=32%  Similarity=0.453  Sum_probs=28.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|++.
T Consensus        54 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~   84 (90)
T d1tena_          54 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPA   84 (90)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             cceeeEeeecCCCEEEEEEEEEeCCCEeCCE
Confidence            5689999999999999999999999998854

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=3.3e-06  Score=48.03  Aligned_cols=32  Identities=25%  Similarity=0.331  Sum_probs=28.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|++..
T Consensus        53 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~   84 (89)
T d1fnfa3          53 RNSITLTNLTPGTEYVVSIVALNGREESPLLI   84 (89)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ccEEEECCCcccCEEEEEEEEEcCCcCcCCEE
Confidence            55799999999999999999999999888643

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.8e-06  Score=52.64  Aligned_cols=44  Identities=18%  Similarity=0.140  Sum_probs=33.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce-EEEEeeeCCCcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY-VFATLSVNGGKA  181 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~-~~~t~~~~~~~~  181 (197)
                      ...+.+.+|+|++.|.|+|+|.|..|.|..+. ...+.+.+..+.
T Consensus        73 ~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~~P~  117 (127)
T d1ueya_          73 TQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPD  117 (127)
T ss_dssp             SCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCS
T ss_pred             ceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCCCCC
Confidence            45799999999999999999999999997543 233344444443

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.6e-06  Score=49.62  Aligned_cols=31  Identities=19%  Similarity=0.253  Sum_probs=28.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.|++.
T Consensus        64 ~~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~   94 (101)
T d2cuia1          64 RHSAVLRDLRSGTLYSLTLYGLRGPHKADSI   94 (101)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEECSSSEEEEE
T ss_pred             eeEEEeCCCCcCCEEEEEEEEEeCCcEeCCe
Confidence            5689999999999999999999999998864

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=5.3e-06  Score=47.08  Aligned_cols=31  Identities=19%  Similarity=0.250  Sum_probs=27.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|.|.+|.|++.|.|+|+|.|..|.|++.
T Consensus        53 ~~~~~~~~L~p~t~Y~~~V~a~n~~g~S~p~   83 (89)
T d1fnha3          53 VTEATITGLEPGTEYTIYVIALKNNQKSEPL   83 (89)
T ss_dssp             CCEEEEESCCTTCEEEEEEEEESSSCEEEEE
T ss_pred             ccEEEEEeeeCCCEEEEEEEEEcCCCEeCCE
Confidence            5579999999999999999999999987653

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.03  E-value=3.9e-06  Score=47.61  Aligned_cols=31  Identities=13%  Similarity=0.234  Sum_probs=28.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|.|++.|.|+|.|.|..|.|++.
T Consensus        52 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~   82 (88)
T d1qr4a2          52 KTRTKLVKLVPGVDYNVNIISVKGFEESEPI   82 (88)
T ss_dssp             CCEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEeCCCCcCCE
Confidence            5579999999999999999999999998763

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=3.5e-07  Score=54.35  Aligned_cols=38  Identities=16%  Similarity=0.205  Sum_probs=31.9

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...|+|.+|+|++.|.|+|+|+|..|.|+++......+
T Consensus        62 ~~~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T   99 (108)
T d1v5ja_          62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVST   99 (108)
T ss_dssp             CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCC
T ss_pred             eeeEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEEC
Confidence            56799999999999999999999999998765443433

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.6e-06  Score=50.86  Aligned_cols=30  Identities=33%  Similarity=0.453  Sum_probs=28.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNK  167 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~  167 (197)
                      ...|++.+|.|++.|.|+|+|.|.+|.|++
T Consensus        73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~  102 (113)
T d1x5ia1          73 QRYYTIENLDPSSHYVITLKAFNNVGEGIP  102 (113)
T ss_dssp             CCEEEECSCCSSCEECCEEEEECSSCBCCC
T ss_pred             ccEEEEeccccCcEEEEEEEEECCCcCCCC
Confidence            568999999999999999999999999984

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.99  E-value=5.3e-06  Score=47.56  Aligned_cols=32  Identities=25%  Similarity=0.425  Sum_probs=28.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+++.+|+|++.|.|+|+|.|..|.|++..
T Consensus        56 ~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~   87 (93)
T d1tdqa1          56 LSQYSVQALRPGSRYEVSISAVRGTNESDASS   87 (93)
T ss_dssp             CSEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ceEEEEeCcccceEEEEEEEEEeCCCCcCCEE
Confidence            45799999999999999999999999998643

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=6.4e-06  Score=46.90  Aligned_cols=32  Identities=22%  Similarity=0.315  Sum_probs=28.7

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.|++..
T Consensus        53 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~   84 (90)
T d1fnha2          53 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVV   84 (90)
T ss_dssp             CSEEEEESCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ccEEEeCCCCCCcEEEEEEEEEeCCCCcCCEE
Confidence            56899999999999999999999999988543

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=7.2e-06  Score=46.70  Aligned_cols=31  Identities=26%  Similarity=0.471  Sum_probs=28.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.+..|.|++.
T Consensus        54 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~   84 (91)
T d1fnfa2          54 DNAVVLTNLLPGTEYVVSVSSVYEQHESTPL   84 (91)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             ceEEEEeceeCCCEEEEEEEEEcCCCCCCCE
Confidence            5579999999999999999999999988753

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.5e-05  Score=46.39  Aligned_cols=32  Identities=16%  Similarity=0.209  Sum_probs=28.4

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcce
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNY  169 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~  169 (197)
                      ...|+|.+|.|++.|.|+|+|++..|.|.+..
T Consensus        51 ~~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~   82 (102)
T d2cuha1          51 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPAS   82 (102)
T ss_dssp             CSEEEECSCCSSSEEEEEEEEEETTEECCCEE
T ss_pred             eeeEEEccEEeeEEEEEEEEEEeCCCCcCCEE
Confidence            45799999999999999999999998887543

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=5.3e-06  Score=47.71  Aligned_cols=31  Identities=16%  Similarity=0.304  Sum_probs=27.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...++|.+|+|++.|.|+|+|.|..|.|.+.
T Consensus        57 ~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p~   87 (94)
T d1fnfa1          57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPI   87 (94)
T ss_dssp             CCEEECCCCCTTSCEEEEEEEEETTEECCCE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCCEeCCE
Confidence            4579999999999999999999999988753

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.2e-05  Score=46.88  Aligned_cols=27  Identities=30%  Similarity=0.491  Sum_probs=24.6

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                      ...+.|.+|+|++.|.|+|+|.|..|.
T Consensus        61 ~~~~~i~~L~p~t~Y~~rVra~~~~g~   87 (104)
T d2b5ib2          61 QEWICLETLTPDTQYEFQVRVKPLQGE   87 (104)
T ss_dssp             CCEEEECSCCTTCEEEEEEEEEESCCS
T ss_pred             cEEEEECCCCCCCEEEEEEEEEECCCC
Confidence            557999999999999999999998885

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.88  E-value=9.3e-06  Score=45.77  Aligned_cols=31  Identities=16%  Similarity=0.362  Sum_probs=28.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.|.+|.|++.|.|+|+|.+..|.|.++
T Consensus        51 ~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~p~   81 (86)
T d1tdqa3          51 RTSYTLTDLEPGAEYIISITAERGRQQSLES   81 (86)
T ss_dssp             CSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred             ccEEEECCCccccEEEEEEEEEcCCCEECCE
Confidence            5579999999999999999999999988764

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1e-05  Score=47.60  Aligned_cols=37  Identities=14%  Similarity=0.152  Sum_probs=29.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCC--CCCcceEEEEe
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAG--STNKNYVFATL  174 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G--~~~~~~~~~t~  174 (197)
                      ...|.|.+|.+++.|.|+|+|.+..|  +|+.+..+...
T Consensus        64 ~~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~  102 (106)
T d1axib2          64 TTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVT  102 (106)
T ss_dssp             SSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEEC
T ss_pred             cceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEE
Confidence            45899999999999999999998665  37766555443

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.1e-06  Score=49.29  Aligned_cols=31  Identities=16%  Similarity=0.172  Sum_probs=22.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.+.+|.|++.|.|+|+|.|..|.|..+
T Consensus        62 ~~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wS   92 (101)
T d1iarb2          62 SLRIAASTLKSGISYRARVRAWAQAYNTTWS   92 (101)
T ss_dssp             EEEECC-----CCCEEEEEEEECGGGTCCCC
T ss_pred             ceEEEECCCCCCCEEEEEEEEEcCCCCCCCc
Confidence            4578999999999999999999999987643

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=97.84  E-value=0.00036  Score=41.08  Aligned_cols=80  Identities=16%  Similarity=0.285  Sum_probs=47.3

Q ss_pred             CCCE-EEEEe--ecCCeEEEEeeeCCCCCccccEEEEEEEe-CCCCcEEEE-------e----CCcccEEEECCCCCCCE
Q psy9139          29 GVPN-ILLQS--TTTHSISILWKPSYDGGAIITHYIVSYRD-RTEDWQSVH-------V----DAEYREFTLTQLKCGTH   93 (197)
Q Consensus        29 ~~p~-~~~~~--~~~~~~~l~W~~~~~~~~~i~~y~v~~~~-~~~~~~~~~-------~----~~~~~~~~i~~L~p~~~   93 (197)
                      .+|. +.+.-  ...+++.|.|.-......+    .|+|.. .........       .    ....++..|++|+|++.
T Consensus        17 ~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~----~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~   92 (112)
T d2qfra1          17 NAPQQVHITQGDLVGRAMIISWVTMDEPGSS----AVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTK   92 (112)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESSSCCCC----EEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCE
T ss_pred             CCCccEEEeCcCCCCCEEEEEEECCCCCCCc----EEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCE
Confidence            3465 44443  3457999999875433333    344442 222222211       0    11235689999999999


Q ss_pred             EEEEEEEEcCCcCCCCCCceEeecC
Q psy9139          94 YKINIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        94 y~~~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      |.|+|      |.+.+|....++|.
T Consensus        93 Y~YrV------G~~~~S~~~~F~T~  111 (112)
T d2qfra1          93 YYYEV------GLRNTTRRFSFITP  111 (112)
T ss_dssp             EEEEE------CCSSSCEEEEEECC
T ss_pred             EEEEE------CCCCceeeEEEEcC
Confidence            99998      33346667777775

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=2e-05  Score=46.80  Aligned_cols=39  Identities=21%  Similarity=0.208  Sum_probs=30.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCC------CcceEEEEeee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGST------NKNYVFATLSV  176 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~------~~~~~~~t~~~  176 (197)
                      ...+.+.+|.|++.|.|+|+|.|..|.+      +.+..+...+.
T Consensus        67 ~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~  111 (114)
T d2gysa2          67 QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQ  111 (114)
T ss_dssp             EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECC
T ss_pred             eEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCc
Confidence            4578899999999999999999998864      44555544443

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=7.4e-06  Score=49.65  Aligned_cols=28  Identities=14%  Similarity=0.205  Sum_probs=25.8

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGST  165 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~  165 (197)
                      ...++|.+|+|++.|.|+|+|+|..|.+
T Consensus        81 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~~  108 (125)
T d2dtge3          81 HPGWLMRGLKPWTQYAIFVKTLVTFSDE  108 (125)
T ss_dssp             CCEEEECSCCSSCBCCBEEEECCCCCSS
T ss_pred             cCEEEECCCccCCEEEEEEEEEeCCCcc
Confidence            5689999999999999999999999963

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.66  E-value=8.5e-06  Score=47.94  Aligned_cols=31  Identities=23%  Similarity=0.235  Sum_probs=28.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+++.+|++++.|.|+|.|.|..|.+.++
T Consensus        67 ~~~~~~~~L~~~t~Y~frV~A~N~~G~s~S~   97 (107)
T d1cd9b1          67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESP   97 (107)
T ss_dssp             EEEEEGGGCCTTSCEEEEEEEEETTEEEECC
T ss_pred             ccEEEcCCCCcCceEEEEEEEEeCCccccCC
Confidence            6789999999999999999999999988643

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=97.65  E-value=0.0007  Score=40.27  Aligned_cols=80  Identities=19%  Similarity=0.293  Sum_probs=47.0

Q ss_pred             CCCE-EEEEe--ecCCeEEEEeeeCCC-CCccccEEEEEEEe-CCCCcEEEE-----------eCCcccEEEECCCCCCC
Q psy9139          29 GVPN-ILLQS--TTTHSISILWKPSYD-GGAIITHYIVSYRD-RTEDWQSVH-----------VDAEYREFTLTQLKCGT   92 (197)
Q Consensus        29 ~~p~-~~~~~--~~~~~~~l~W~~~~~-~~~~i~~y~v~~~~-~~~~~~~~~-----------~~~~~~~~~i~~L~p~~   92 (197)
                      .+|. +++.-  ...+++.|+|.-..+ .+.+    .|+|.. ....+....           .....++.+|++|+|++
T Consensus        23 ~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~----~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T   98 (119)
T d1xzwa1          23 NAPQQVHITQGDYEGRGVIISWTTPYDKAGAN----KVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDT   98 (119)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESSCCTTTT----EEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTC
T ss_pred             CCCCEEEEEecCCCCCEEEEEEECCCCCCCCC----EEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCC
Confidence            4665 44443  346799999997542 2222    455542 222222211           11223578999999999


Q ss_pred             EEEEEEEEEcCCcCCCCCCceEeecC
Q psy9139          93 HYKINIKLVNSIGESKPSKTIAASTK  118 (197)
Q Consensus        93 ~y~~~v~a~~~~g~~~~s~~~~~~t~  118 (197)
                      .|.|+|-      .+..+....++|.
T Consensus        99 ~Y~YrVG------~~~~S~~~~F~T~  118 (119)
T d1xzwa1          99 KYYYRLG------FGDAKRQFWFVTP  118 (119)
T ss_dssp             EEEEEEC------CGGGCEEEEEECC
T ss_pred             EEEEEEC------CCCccceEEEeCC
Confidence            9999983      2235566677764

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=4.9e-05  Score=44.62  Aligned_cols=34  Identities=12%  Similarity=0.188  Sum_probs=26.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC--CCcceEE
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS--TNKNYVF  171 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~--~~~~~~~  171 (197)
                      ...++|.+|.+++.|.|+|+|.|..+.  |+.+..+
T Consensus        66 ~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~  101 (109)
T d1uc6a_          66 GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAA  101 (109)
T ss_dssp             CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEE
T ss_pred             ceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCE
Confidence            457999999999999999999876432  4445444

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.8e-05  Score=43.50  Aligned_cols=28  Identities=18%  Similarity=0.235  Sum_probs=24.8

Q ss_pred             CCeeEEEEEEeCCCCceeEEEEEecCCC
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQVTILSPP   28 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~~~~~~P   28 (197)
                      ++|.|+|.|.|..|.....+.+.|...|
T Consensus        56 DsG~Y~C~a~N~~g~~~~~~~v~V~~~~   83 (84)
T d2nxyb2          56 DSGTWTCTVLQNQKKVEFKIDIVVLAFQ   83 (84)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEECEECCC
T ss_pred             cccEEEEEEEeCCCEEEEEEEEEEEecC
Confidence            5899999999999999889888887765

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=5.1e-06  Score=48.55  Aligned_cols=37  Identities=22%  Similarity=0.167  Sum_probs=30.3

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcceEEEEee
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKNYVFATLS  175 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~~~~~t~~  175 (197)
                      ...+.+.+|++++ |.|+|+|.|..|.|+.+..+.+.+
T Consensus        62 ~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~   98 (102)
T d2dtge1          62 ERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYV   98 (102)
T ss_dssp             TTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECC
T ss_pred             eEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEc
Confidence            4568899999975 999999999999999766554444

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=3.4e-05  Score=44.20  Aligned_cols=31  Identities=16%  Similarity=0.080  Sum_probs=27.1

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...+.+.+|.+++.|.|+|+|.|..|.+.++
T Consensus        58 ~~~~~~~~L~~~~~Y~f~V~A~N~~G~s~S~   88 (95)
T d1bqua1          58 TSCTVDYSTVYFVNIEVWVEAENALGKVTSD   88 (95)
T ss_dssp             TEEECSSCCCTTSCEEEEEEEEETTEEEECC
T ss_pred             eeeeeeeecCCCcEEEEEEEEEeCCccccCC
Confidence            4568888999999999999999999987643

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00012  Score=41.82  Aligned_cols=27  Identities=7%  Similarity=0.185  Sum_probs=23.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                      ...+++.+|.|++.|.|+|+|.+..+.
T Consensus        54 ~~~~~~~~L~p~t~Y~frVRa~~~~~~   80 (95)
T d2b5ic1          54 RHKFSLPSVDGQKRYTFRVRSRFNPLC   80 (95)
T ss_dssp             SCEEEECSCCTTSCEEEEEEEECCSSS
T ss_pred             cceeEcCCCCCCCEEEEEEEEeeCCCC
Confidence            457999999999999999999866543

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00074  Score=38.64  Aligned_cols=27  Identities=19%  Similarity=0.354  Sum_probs=24.0

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGS  164 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~  164 (197)
                      ...+++.+|+|++.|.|+|+|.+..|.
T Consensus        60 ~~~~~l~~L~p~t~Y~~rVRa~~~~g~   86 (100)
T d2gysa4          60 AHSMALPALEPSTRYWARVRVRTSRTG   86 (100)
T ss_dssp             CSEEECCCCCSSCCCEEEEEEEECCTT
T ss_pred             ceEEEeCCCCCCCeEEEEEEEEECCCC
Confidence            457999999999999999999987764

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.27  E-value=0.0021  Score=36.54  Aligned_cols=78  Identities=19%  Similarity=0.312  Sum_probs=54.2

Q ss_pred             CCE-EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCcEEEE--eCCcccEEEE--CCCCCCCEEEEEEEEEcC
Q psy9139          30 VPN-ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDWQSVH--VDAEYREFTL--TQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        30 ~p~-~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~~~~~--~~~~~~~~~i--~~L~p~~~y~~~v~a~~~  103 (197)
                      .|. +.+....-..++..|+++.+...+ +.|.+.++.. ...|....  .....+.+.+  ..+.....|.|.|.|.|.
T Consensus         2 kP~~~sC~s~~~~~~~C~W~~G~~t~L~-T~Y~l~~~~~~~~~~~eCp~y~~~~~~~C~f~~~~~~~~~~y~i~V~a~N~   80 (96)
T d1f6fb1           2 KPEIHKCRSPDKETFTCWWNPGTDGGLP-TNYSLTYSKEGEKTTYECPDYKTSGPNSCFFSKQYTSIWKIYIITVNATNQ   80 (96)
T ss_dssp             CCEEEEEEBSSSSCEEEEEECCCCTTSC-CEEEEEEEETTEEEEEECSCSSTTCTTEEEECTTTCCSSCEEEEEEEEEET
T ss_pred             CCeEeEEEeCCCCEEEEEeeCCCcCCcC-ceEEEEEEecCCCccccCCcccCCCceeEEECCccCccceEEEEEEEEEcC
Confidence            465 677777778899999998765555 5689988743 33343332  2233456666  446678899999999999


Q ss_pred             CcCCC
Q psy9139         104 IGESK  108 (197)
Q Consensus       104 ~g~~~  108 (197)
                      .|...
T Consensus        81 LG~~~   85 (96)
T d1f6fb1          81 MGSSS   85 (96)
T ss_dssp             TEEEE
T ss_pred             CCCcc
Confidence            99654

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00033  Score=40.61  Aligned_cols=24  Identities=29%  Similarity=0.426  Sum_probs=21.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcC
Q psy9139         138 EMPLVIENLLPATRYELTISAKND  161 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~  161 (197)
                      ...+.|.+|.|++.|.|+|+|.+.
T Consensus        62 ~t~~~i~~L~p~t~Y~~rVRar~~   85 (105)
T d1erna2          62 RTECVLSNLRGRTRYTFAVRARMA   85 (105)
T ss_dssp             CCEEEECSCCSSCEEEEEEEEEEC
T ss_pred             ccEEEEeCCCCCcEEEEEEEEEEC
Confidence            457999999999999999999865

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=7.6e-05  Score=42.87  Aligned_cols=31  Identities=6%  Similarity=-0.067  Sum_probs=27.5

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      .+.+++.+|.++..|.|||+|.|..|.|+.+
T Consensus        56 ~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws   86 (98)
T d1fyhb1          56 YCNISDHVGDPSNSLWVRVKARVGQKESAYA   86 (98)
T ss_dssp             EEECGGGCCSTTSCEEEEEEEEETTEECCCE
T ss_pred             eeeeEecccCCCCEEEEEEEEEcCCcccCCc
Confidence            5567888999999999999999999998854

>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-alpha/beta receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.032  Score=32.16  Aligned_cols=70  Identities=16%  Similarity=0.177  Sum_probs=47.1

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEE--eCCcccEEEECC--CCCCCEEEEEEEEEcCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVH--VDAEYREFTLTQ--LKCGTHYKINIKLVNSI  104 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~--~~~~~~~~~i~~--L~p~~~y~~~v~a~~~~  104 (197)
                      +.+... .-...|.|+++.....+ ..|.++|+.  ....|..+.  .....+.+.++.  +.+...|..||+|..+.
T Consensus        14 v~i~s~-Nf~~iL~W~p~~~s~~~-~~YtVqy~~~~~~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~A~~G~   89 (109)
T d2hyma1          14 FKISLR-NFRSILSWELKNHSIVP-THYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGN   89 (109)
T ss_dssp             EEEEES-SSCEEEEEECCCSSCCC-CEEEEEEEETTCTTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEEEEETT
T ss_pred             EEEEEE-CCceEEEECCCCCCCCC-eEEEEEEEEEcccccCccchhhhCCCCCeEeCchhhccCCccEEEEEEEEcCC
Confidence            444432 34458999986543333 569999983  345688763  345567788866  56788899999999643

>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Semaphorin 4d Ig-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0018  Score=36.44  Aligned_cols=22  Identities=23%  Similarity=0.526  Sum_probs=17.2

Q ss_pred             CCeeEEEEEEeCCCCceeEEEE
Q psy9139           1 MVGNYTCLADNIFGKDDIYYQV   22 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~~~~   22 (197)
                      |+|.|+|.|.|..|.......+
T Consensus        61 DsG~Y~C~A~n~~g~~~~~~~l   82 (92)
T d1olza1          61 DSGVYQCLSEERVKNKTVFQVV   82 (92)
T ss_dssp             GCEEEEEEEEEECSSSEEEEEE
T ss_pred             HCcEEEEEEEEcCCCEEEEEEE
Confidence            6899999999999976544433

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.00042  Score=39.80  Aligned_cols=29  Identities=14%  Similarity=0.190  Sum_probs=25.1

Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         140 PLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       140 ~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      .+.+.+|.++..|.|||+|.|..|.|+.+
T Consensus        62 ~~~~~~l~~~~~Y~fRVrA~n~~g~S~Ws   90 (99)
T d1y6kr1          62 TAVTLDLYHSNGYRARVRAVDGSRHSQWT   90 (99)
T ss_dssp             GGGGTTGGGSSCEEEEEEEEETTEECCCE
T ss_pred             eeeeeecCCCCEEEEEEEEEcCCCcCCCc
Confidence            45678999999999999999999988753

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.018  Score=33.74  Aligned_cols=67  Identities=13%  Similarity=0.181  Sum_probs=44.4

Q ss_pred             CCCEEEEEeecCCeEEEEeeeCC----CCCc---------cccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEE
Q psy9139          29 GVPNILLQSTTTHSISILWKPSY----DGGA---------IITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYK   95 (197)
Q Consensus        29 ~~p~~~~~~~~~~~~~l~W~~~~----~~~~---------~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~   95 (197)
                      +||.+.+.....+++.|...+|.    ..+.         +-..|.|.++..... ..     ......|.+|+|++.|-
T Consensus        19 GPP~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~-~~-----~~~~~~l~~L~p~t~YC   92 (116)
T d2c4fu1          19 GQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKT-AK-----TNTNEFLIDVDKGENYC   92 (116)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEE-EE-----ESSSEEEEECCTTCCCE
T ss_pred             CCceEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCce-EE-----EeeeEEEeCCCCCCcEE
Confidence            66776666666778888887763    1111         124688887633221 11     23447899999999999


Q ss_pred             EEEEEE
Q psy9139          96 INIKLV  101 (197)
Q Consensus        96 ~~v~a~  101 (197)
                      +.|.|.
T Consensus        93 v~Vqa~   98 (116)
T d2c4fu1          93 FSVQAV   98 (116)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999997

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.04  Score=31.06  Aligned_cols=43  Identities=9%  Similarity=0.101  Sum_probs=32.5

Q ss_pred             EEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          74 VHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        74 ~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                      +........+.|.++.......|.|.+.|..|....+..+.+.
T Consensus        49 ~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~   91 (101)
T d2cqva1          49 VENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV   91 (101)
T ss_dssp             EEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEE
T ss_pred             EEEecceeEEEEeeCCcccCEEEEEEEEECCCEEEEEEEEEEE
Confidence            3334555679999999999999999999999876555444443

>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0045  Score=35.57  Aligned_cols=19  Identities=32%  Similarity=0.441  Sum_probs=15.0

Q ss_pred             CCeeEEEEEEeCCCCceeE
Q psy9139           1 MVGNYTCLADNIFGKDDIY   19 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~~~~~   19 (197)
                      ++|.|+|.|.|..|.....
T Consensus        69 D~G~Y~C~a~n~~~g~~~~   87 (103)
T d1iray2          69 HRGNYTCHASYTYLGKQYP   87 (103)
T ss_dssp             GCEEEEEEEEEEETTEEEE
T ss_pred             cCcEEEEEEEECcCCEEEE
Confidence            5899999999988754433

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=95.60  E-value=0.014  Score=34.01  Aligned_cols=18  Identities=22%  Similarity=0.248  Sum_probs=16.4

Q ss_pred             ceEEEcCCCCCCeEEEEE
Q psy9139         139 MPLVIENLLPATRYELTI  156 (197)
Q Consensus       139 ~~~~i~~L~p~t~Y~v~V  156 (197)
                      ....|++|+|++.|.++|
T Consensus        80 h~v~Lt~L~P~T~Y~YrV   97 (112)
T d2qfra1          80 HHTTIRKLKYNTKYYYEV   97 (112)
T ss_dssp             EEEEECSCCTTCEEEEEE
T ss_pred             EEEEECCCCCCCEEEEEE
Confidence            357899999999999998

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0035  Score=35.34  Aligned_cols=25  Identities=8%  Similarity=0.117  Sum_probs=20.8

Q ss_pred             cCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         144 ENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       144 ~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ..|.|++.|.|+|+|.+..|.|..+
T Consensus        63 ~~L~p~~~Y~v~VRa~~~~~~g~WS   87 (94)
T d3d85d3          63 ATVICRKNASISVRAQDRYYSSSWS   87 (94)
T ss_dssp             EEECCCSSCEEEEEEEESSSCCCCC
T ss_pred             EEecCCCCEEEEEEEecCCCCCCCc
Confidence            3578999999999999988877643

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.047  Score=31.16  Aligned_cols=36  Identities=8%  Similarity=0.061  Sum_probs=28.2

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      .....+.|.++.......|.|.|.|..|....+..+
T Consensus        64 ~~~~~l~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~v   99 (110)
T d1f97a2          64 PKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAA   99 (110)
T ss_dssp             TTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCE
T ss_pred             ecccceEECCCCccCCEEEEEEEEECCCcEEEEEEE
Confidence            344568899999999999999999999876544443

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=95.03  E-value=0.019  Score=33.82  Aligned_cols=19  Identities=21%  Similarity=0.258  Sum_probs=16.8

Q ss_pred             ceEEEcCCCCCCeEEEEEE
Q psy9139         139 MPLVIENLLPATRYELTIS  157 (197)
Q Consensus       139 ~~~~i~~L~p~t~Y~v~V~  157 (197)
                      ...+|++|+|+|.|.++|-
T Consensus        87 H~v~LtgL~P~T~Y~YrVG  105 (119)
T d1xzwa1          87 HHCTIKDLEYDTKYYYRLG  105 (119)
T ss_dssp             EEEEECCCCTTCEEEEEEC
T ss_pred             EEEEECCCCCCCEEEEEEC
Confidence            4688999999999999983

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=94.93  E-value=0.031  Score=31.55  Aligned_cols=37  Identities=22%  Similarity=0.259  Sum_probs=28.8

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceE
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIA  114 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~  114 (197)
                      .....+.|.++.......|.|.|.|..|....+..+.
T Consensus        62 ~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~   98 (102)
T d1fhga_          62 EGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELL   98 (102)
T ss_dssp             TCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred             CceeeeEecCCCHHhCEEEEEEEEECCcEEEEEEEEE
Confidence            3456789999999999999999999998754443333

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=94.56  E-value=0.012  Score=33.04  Aligned_cols=40  Identities=13%  Similarity=0.186  Sum_probs=29.7

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEee
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAAS  116 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~~  116 (197)
                      ......+.|.++.......|.|.|.|..|....+..+.+.
T Consensus        53 ~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~   92 (97)
T d1koaa1          53 NGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT   92 (97)
T ss_dssp             STTEEEEEESCCCSGGGSCEEEEEEETTEEEEEEECCEEE
T ss_pred             cCCeeEEEeCCCceecCEEEEEEEEECCCEEEEEEEEEEe
Confidence            3445568999999988889999999999875444444443

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=94.47  E-value=0.048  Score=30.46  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=27.5

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPS  110 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s  110 (197)
                      ......+.|.++.......|.|.|.|..|.....
T Consensus        57 ~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~~~~   90 (98)
T d1g1ca_          57 EDNVCELVIRDVTGEDSASIMVKAINIAGETSSH   90 (98)
T ss_dssp             ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeccCccccCEEEEEEEEECCcEEEEE
Confidence            3445578999999999999999999999875433

>d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.2  Score=28.49  Aligned_cols=72  Identities=18%  Similarity=0.250  Sum_probs=49.4

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECC-C--CCCCEEEEEEEEEcCCcCCCC
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQ-L--KCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~-L--~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      +.+.+ ..-...|.|+++..   . ..|.|+++...+.|...........+.|.+ +  .....|..||+|....+.+..
T Consensus        12 V~~~S-~Nf~~iL~W~p~~~---~-~~YtVqy~~~~~~W~~~C~nit~~~CDlt~~~~~d~~~~Y~aRVrA~~~~~~S~~   86 (106)
T d2hfta1          12 LTWKS-TNFKTILEWEPKPV---N-QVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVEST   86 (106)
T ss_dssp             EEEEE-ETTEEEEEEECCCS---S-EEEEEEEEETTSCCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEEEECSSCCCC
T ss_pred             EEEEE-EcCeEEEEECCCCC---C-EEEEEEEEEcCCchhhcccCcCccccccccccccCCCCCEEEEEEEEcCCCcccc
Confidence            44443 34556799997531   2 459999986667788655556677788864 2  456789999999977665543

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.0093  Score=33.09  Aligned_cols=15  Identities=20%  Similarity=0.217  Sum_probs=12.9

Q ss_pred             CCeeEEEEEEeCCCC
Q psy9139           1 MVGNYTCLADNIFGK   15 (197)
Q Consensus         1 ~~g~y~c~a~n~~G~   15 (197)
                      |+|+|+|.|.|..|.
T Consensus        60 dsG~Y~C~a~n~~~~   74 (89)
T d1f2qa2          60 DSGTYYCTGKVWQLD   74 (89)
T ss_dssp             GCEEEEEEEEETTEE
T ss_pred             cCcEEEEEEEeCCCC
Confidence            589999999998773

>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Mucosal addressin cell adhesion molecule-1 (MADCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.13  Score=28.13  Aligned_cols=66  Identities=9%  Similarity=-0.059  Sum_probs=42.4

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ....++.|.|........+    .+.|...+..............++|.++.......|.|.|.|..|..
T Consensus        16 ~~G~~~~l~C~~~~g~p~p----~v~W~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~Asn~~g~~   81 (90)
T d1gsma1          16 ALGASRQLTCRLACADRGA----SVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTF   81 (90)
T ss_dssp             ETTCCEEEEEEECCSSTTC----EEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             EeCCcEEEEEEecCCCCcc----EEEEEEeeeeeeeeeccCceeeEEcCccChhhCCcEEEEEEeCCCcE
Confidence            4577888888764211111    35566332222222333455679999999999999999999988753

>d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.88  E-value=0.26  Score=27.86  Aligned_cols=65  Identities=22%  Similarity=0.297  Sum_probs=44.9

Q ss_pred             CCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECC--CCC-CCEEEEEEEEEcCCcCCC
Q psy9139          40 THSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQ--LKC-GTHYKINIKLVNSIGESK  108 (197)
Q Consensus        40 ~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~--L~p-~~~y~~~v~a~~~~g~~~  108 (197)
                      .-...|.|+++..   . ..|.|+++...+.|...........+.+.+  |.+ ...|..||+|....+.+.
T Consensus        13 Nf~~iL~W~p~~~---~-~~YtVqy~~~~~~W~~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra~~~~~~s~   80 (103)
T d1a21a1          13 NFKTILEWEPKSI---D-HVYTVQISTRLENWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYPARNGNT   80 (103)
T ss_dssp             TTEEEEEEECCCS---S-EEEEEEEECSSSCCEEEEEEESSSEEECHHHHTTCTTSCBEEEEEEEECCC--C
T ss_pred             cCceEEEECCCCC---C-eEEEEEEEecCCCccccccCcCcceecCcccccccCCCCEEEEEEEecCCCccc
Confidence            4456799997531   2 459999986566898665566677888864  455 467999999987765543

>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.31  Score=26.94  Aligned_cols=32  Identities=13%  Similarity=0.102  Sum_probs=24.8

Q ss_pred             CCcccEEEECCCC-CCCEEEEEEEEEcCCcCCC
Q psy9139          77 DAEYREFTLTQLK-CGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        77 ~~~~~~~~i~~L~-p~~~y~~~v~a~~~~g~~~  108 (197)
                      ......+.|.++. ......|.|.|.|..|...
T Consensus        61 ~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~G~~~   93 (101)
T d3b5ha1          61 SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQ   93 (101)
T ss_dssp             ETTEEEEEECSCCTTTSSEEEEEEEEETTEEEE
T ss_pred             CCCEEEEEEeccccccCCEEEEEEEEECCCEEE
Confidence            3445678888887 4667899999999998654

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=92.84  E-value=0.053  Score=29.83  Aligned_cols=35  Identities=11%  Similarity=0.205  Sum_probs=28.4

Q ss_pred             EeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          75 HVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        75 ~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ........+.|.++.......|.|.+.|..|....
T Consensus        49 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~   83 (91)
T d1tnna_          49 TTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEA   83 (91)
T ss_dssp             EECSSEEEEECSSCCSCCCEEEEEECBCSSCBCCE
T ss_pred             eeecceeEEeecCCCHHHCEEEEEEEEECCCEEEE
Confidence            34455677899999999999999999999887543

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=91.88  E-value=0.35  Score=26.63  Aligned_cols=70  Identities=6%  Similarity=-0.065  Sum_probs=40.2

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeC-CCCc-EEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDR-TEDW-QSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~-~~~~-~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ....++.|.|.....+...+.||+-..... .... ...........+.|.++.+.....|.|.|.|..|..
T Consensus        16 ~~G~~v~l~C~~~g~P~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   87 (97)
T d1biha3          16 KAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKP   87 (97)
T ss_dssp             ETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSC
T ss_pred             ecCCeEEEEEEEEEecCCEEEEEEeeeeccccceeeeeeeeecCCCEEEEEeccccccEEEEEEEEECCCcE
Confidence            346677777765332222344432111111 1111 111122344579999999999999999999998864

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=91.44  E-value=0.053  Score=29.93  Aligned_cols=32  Identities=16%  Similarity=0.239  Sum_probs=26.7

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ......+.|.++.......|.|.|.|..|...
T Consensus        54 ~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~~   85 (93)
T d1wiua_          54 KSSTTSIFFPSAKRADSGNYKLKVKNELGEDE   85 (93)
T ss_dssp             ETTEEEEECTTBCGGGCEEEEEEEEETTEEEE
T ss_pred             cccceeeccccccccccEEEEEEEEECCCEEE
Confidence            44556789999999999999999999998654

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.30  E-value=0.18  Score=27.54  Aligned_cols=65  Identities=8%  Similarity=-0.024  Sum_probs=40.3

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....+.|.|.....+..     .+.|...++.... ........+.|.++.......|.|.|.|..|...
T Consensus        18 ~~G~~v~l~C~~~g~P~p-----~i~W~k~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   82 (91)
T d1cs6a3          18 LTGQMVTLECFAFGNPVP-----QIKWRKLDGSQTS-KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDT   82 (91)
T ss_dssp             ETTCCEEEECEEEEESCC-----EEEEEECCSCCSC-CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             ecCCcEEEEEEEEEccCC-----EEEEEecccccce-EeeeeeeEEEeCCCCccCCEEEEEEEEECCCEEE
Confidence            345678888876322211     2445432221111 1123345799999999999999999999998653

>d1axib1 b.1.2.1 (B:32-130) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.61  Score=26.05  Aligned_cols=71  Identities=17%  Similarity=0.256  Sum_probs=41.3

Q ss_pred             EEEEeecCCeEEEEeeeCCCCCcc----c-cEEEEEEE-eCCCCcEEEE--eCCcccEEEE--CCCCCCCEEEEEEEEEc
Q psy9139          33 ILLQSTTTHSISILWKPSYDGGAI----I-THYIVSYR-DRTEDWQSVH--VDAEYREFTL--TQLKCGTHYKINIKLVN  102 (197)
Q Consensus        33 ~~~~~~~~~~~~l~W~~~~~~~~~----i-~~y~v~~~-~~~~~~~~~~--~~~~~~~~~i--~~L~p~~~y~~~v~a~~  102 (197)
                      +.+.......++..|+++.+++.+    + ..|.+.+. .....|.+..  .....+++-+  ..+.-.+.|.++|+|.|
T Consensus         5 ~~C~s~~~etftC~W~pG~~~~l~~~~~l~~~Y~~~~~~~~~~~~~eCpdY~~~~~nsC~F~~~~tsiw~~Y~i~v~a~n   84 (99)
T d1axib1           5 TKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNG   84 (99)
T ss_dssp             EEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEEEEEEEETT
T ss_pred             eeEecCCCcEEEEEecCCCcCCCCCCCceeEEEEEeccccCCCccccCcCCccCCccceEeCCcccceeeEEEEEEEeCC
Confidence            667777788999999987644322    1 23554443 3355666542  2344455655  55888999999999977


Q ss_pred             C
Q psy9139         103 S  103 (197)
Q Consensus       103 ~  103 (197)
                      .
T Consensus        85 ~   85 (99)
T d1axib1          85 G   85 (99)
T ss_dssp             E
T ss_pred             C
Confidence            3

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

Probab=89.92  E-value=0.038  Score=30.92  Aligned_cols=31  Identities=6%  Similarity=0.034  Sum_probs=26.0

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      .....+.|.++.......|.|.|.|..|...
T Consensus        59 ~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   89 (97)
T d3dara1          59 NQHWSLIMESVVPSDKGNYTCVVENEYGSIN   89 (97)
T ss_dssp             GGGTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CCcEEEEECCCCcccCEEEEEEEEECCCEEE
Confidence            3456799999999999999999999988643

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.88  E-value=0.22  Score=27.60  Aligned_cols=33  Identities=15%  Similarity=0.170  Sum_probs=26.9

Q ss_pred             CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          77 DAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        77 ~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ......+.|.++.......|.|.|.|..|....
T Consensus        59 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~   91 (100)
T d1qz1a3          59 SDDSSELTIRNVDKNDEAEYVCIAENKAGEQDA   91 (100)
T ss_dssp             CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             ecCceEEEeCCCCcccCEEEEEEEEECCCEEEE
Confidence            344567899999999999999999999886543

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.52  Score=25.38  Aligned_cols=27  Identities=4%  Similarity=-0.054  Sum_probs=23.2

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ..+.|.++.+.....|+|.+.|..|..
T Consensus        54 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~   80 (91)
T d1rhfa1          54 GFLSLKSVERSDAGRYWCQVEDGGETE   80 (91)
T ss_dssp             EEEEESSCCGGGCEEEEEEESSCTTCE
T ss_pred             eeEEECCCCcccCEEEEEEEEECCCCE
Confidence            457889999999999999999988753

>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.66  E-value=0.86  Score=24.83  Aligned_cols=29  Identities=7%  Similarity=-0.001  Sum_probs=24.9

Q ss_pred             CcccEEEECCCCCCCEEEEEEEEEcCCcC
Q psy9139          78 AEYREFTLTQLKCGTHYKINIKLVNSIGE  106 (197)
Q Consensus        78 ~~~~~~~i~~L~p~~~y~~~v~a~~~~g~  106 (197)
                      .....+.|.++.......|+|.|.|..|.
T Consensus        57 ~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~   85 (97)
T d1epfa1          57 DDSSTLTIYNANIDDAGIYKCVVTAEDGT   85 (97)
T ss_dssp             TTEEEEEECSCCGGGCEEEEEEEEETTTE
T ss_pred             CcceEEEcccCchhhceEEEEEEEeCCCc
Confidence            34567899999999999999999998875

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.11  E-value=0.052  Score=30.56  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=26.8

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ...+.|.++.......|.|.|.|..|....+..+
T Consensus        65 ~~~l~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~v   98 (104)
T d1nbqa2          65 TGELVFDPLSASDTGEYSCEARNGYGTPMTSNAV   98 (104)
T ss_dssp             TCCEEESSCCGGGCCCEEEEEECSSSCCEECCCB
T ss_pred             ccceEECCCCcccCcEEEEEEEECCCceEEEEEE
Confidence            3467889998888889999999999876554443

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.14  Score=29.76  Aligned_cols=21  Identities=10%  Similarity=0.134  Sum_probs=19.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEE
Q psy9139         139 MPLVIENLLPATRYELTISAK  159 (197)
Q Consensus       139 ~~~~i~~L~p~t~Y~v~V~a~  159 (197)
                      ..+.|.+|.|++.|-|+|+|.
T Consensus        78 ~~~~l~~L~p~t~YCv~Vqa~   98 (116)
T d2c4fu1          78 TNEFLIDVDKGENYCFSVQAV   98 (116)
T ss_dssp             SSEEEEECCTTCCCEEEEEEE
T ss_pred             eeEEEeCCCCCCcEEEEEEEE
Confidence            357899999999999999997

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

Probab=88.52  E-value=0.61  Score=25.96  Aligned_cols=30  Identities=17%  Similarity=0.021  Sum_probs=25.3

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        73 ~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~  102 (109)
T d2fdbp2          73 IEVLYIRNVTFEDAGEYTCLAGNSIGISFH  102 (109)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred             cEEEEECCCCHHHCeEEEEEEEECCCEEEE
Confidence            346889999999999999999999886543

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.50  E-value=0.18  Score=27.24  Aligned_cols=29  Identities=7%  Similarity=-0.075  Sum_probs=24.9

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...+.|.++.......|.|.|.|..|...
T Consensus        53 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~   81 (89)
T d1gl4b_          53 NGILTIRNVQPSDAGTYVCTGSNMFAMDQ   81 (89)
T ss_dssp             TTEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred             ceEEEEecCCcccCEEEEEEEEECCCEEE
Confidence            34689999999999999999999988643

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=88.44  E-value=0.72  Score=24.80  Aligned_cols=28  Identities=14%  Similarity=0.197  Sum_probs=24.4

Q ss_pred             cEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          81 REFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        81 ~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ..+.|.++.......|.|.|.|..|...
T Consensus        54 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~   81 (89)
T d1biha4          54 SGLVIKGVKNGDKGYYGCRATNEHGDKY   81 (89)
T ss_dssp             TEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred             eeEEECCCChhhCEEEEEEEEECCCEEE
Confidence            4589999999999999999999988643

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.09  E-value=0.39  Score=26.26  Aligned_cols=28  Identities=11%  Similarity=0.020  Sum_probs=24.3

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ...+.|.++.+.....|+|.|.|..|..
T Consensus        59 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   86 (96)
T d2c9aa1          59 IASFNVVNTTKRDAGKYRCMIRTEGGVG   86 (96)
T ss_dssp             EEEEEECSCCGGGCSEEEEEEEETTEEE
T ss_pred             ceEEEECCCCHHHCeEEEEEEEeCCCeE
Confidence            3468999999999999999999999864

>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=1  Score=24.14  Aligned_cols=67  Identities=10%  Similarity=0.069  Sum_probs=41.5

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCC--CcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTE--DWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      .....+.|.|.....+.   .  .+.|.....  .............+.|.++.......|.|.|.|..|....
T Consensus        14 ~~G~~v~l~C~~~g~p~---p--~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~   82 (90)
T d1vcaa2          14 QIGDSVSLTCSTTGCES---P--FFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK   82 (90)
T ss_dssp             ETTSCEEEEEEEESCSS---C--EEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred             ECCCEEEEEEeccCCCC---c--eEEEEecCccceeeeeeeecCCcEEEEecccccccceEEEEEEeCCCEEEE
Confidence            35677888888733222   1  244542211  1111222344567999999999999999999999886443

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.47  E-value=0.69  Score=24.89  Aligned_cols=30  Identities=13%  Similarity=-0.005  Sum_probs=25.1

Q ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCcCCCC
Q psy9139          80 YREFTLTQLKCGTHYKINIKLVNSIGESKP  109 (197)
Q Consensus        80 ~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~  109 (197)
                      ...+.|.++.......|.|.|.|..|....
T Consensus        52 ~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~   81 (89)
T d1cs6a4          52 GGELRFSKLVLEDSGMYQCVAENKHGTVYA   81 (89)
T ss_dssp             TTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             eeeEEEEeecccCCEEEEEEEEeCCCEEEE
Confidence            346889999999999999999999986433

>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.09  E-value=1.5  Score=23.65  Aligned_cols=67  Identities=10%  Similarity=0.074  Sum_probs=38.8

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .....+.|.|.... +...+.||+-...........  .......+.|.++.......|+|.|.|..|..
T Consensus        16 ~~g~~v~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~   82 (96)
T d1l6za2          16 KELDSVTLTCLSND-IGANIQWLFNSQSLQLTERMT--LSQNNSILRIDPIKREDAGEYQCEISNPVSVR   82 (96)
T ss_dssp             CTTSCEEEEECCCC-SSCEEEEEETTEECCCCTTEE--EETTTTEEEECSCCGGGCEEEEEEEESSSCCE
T ss_pred             eCCCeEEEEEccCC-CCCCEEEEEeeeeccccccee--ccCCceEEEEeccchhhceEEEEEEEeCCCCe
Confidence            34677889987522 122222221111111111111  23345678999999999999999999988754

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.46  E-value=0.5  Score=26.09  Aligned_cols=31  Identities=19%  Similarity=0.187  Sum_probs=24.2

Q ss_pred             cceEEEcCCCCCCeEEEEEEEEcCCCCCCcc
Q psy9139         138 EMPLVIENLLPATRYELTISAKNDAGSTNKN  168 (197)
Q Consensus       138 ~~~~~i~~L~p~t~Y~v~V~a~n~~G~~~~~  168 (197)
                      ...|....+.....|.|.|.|.|..|...+.
T Consensus        57 ~C~f~~~~~~~~~~y~i~V~a~N~LG~~~Sd   87 (96)
T d1f6fb1          57 SCFFSKQYTSIWKIYIITVNATNQMGSSSSD   87 (96)
T ss_dssp             EEEECTTTCCSSCEEEEEEEEEETTEEEECC
T ss_pred             eEEECCccCccceEEEEEEEEEcCCCCcccc
Confidence            3445556778889999999999999976543

>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ig alpha Fc receptor, FCARI (CD89)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.62  E-value=1.8  Score=23.64  Aligned_cols=72  Identities=8%  Similarity=0.052  Sum_probs=44.5

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEE--E---eCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCce
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSV--H---VDAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTI  113 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~--~---~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~  113 (197)
                      ....++|.|..+..    ...|.+..... ..+...  .   .......+.|.++.+.....|+|...+....+.+|+++
T Consensus        20 ~G~~VTL~C~~~~~----~~~f~l~k~g~-~~~~~~~~~~~~~~~~~a~F~l~~vt~~~~G~Y~C~y~~~~~~S~~Sdpl   94 (99)
T d1ucta1          20 LDGSVKIQCQAIRE----AYLTQLMIIKN-STYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTL   94 (99)
T ss_dssp             TTCCEEEEECCCTT----CSEEEEEEEET-TEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCE
T ss_pred             CCCeEEEEEcCCCC----CcEEEEEECCC-cCceeccccccCCCCceEEEEecCCCHHHCceEEEEEECCCcccCCCCCE
Confidence            46789999976542    23455554321 111111  1   12234568999999999999999988876667777766


Q ss_pred             Ee
Q psy9139         114 AA  115 (197)
Q Consensus       114 ~~  115 (197)
                      .+
T Consensus        95 ~L   96 (99)
T d1ucta1          95 EL   96 (99)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of NK receptor NKp46
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.58  E-value=0.84  Score=25.05  Aligned_cols=72  Identities=10%  Similarity=0.070  Sum_probs=45.3

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEe---CCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCCCceEe
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHV---DAEYREFTLTQLKCGTHYKINIKLVNSIGESKPSKTIAA  115 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~~s~~~~~  115 (197)
                      ....++|.|..+..    ...|.+.. +..........   ......+.|.++.+...+.|+|...+..+.+.+|..+..
T Consensus        17 ~G~~VTL~C~~~~~----~~~f~L~k-~g~~~~~~~~~~~~~~~~a~F~i~~v~~~~~G~Y~C~y~~~~~~S~~Sd~leL   91 (95)
T d1olla1          17 KEKQVTICCQGNYG----AVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL   91 (95)
T ss_dssp             TTCCEEEEEECCTT----CCEEEEEE-TTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred             CCCcEEEEEecCCC----ccEEEEEE-CCCCcceeEEccCCCccEEEEEEeeeecCCCceEEEEeCCCCCccCCCCCEEE
Confidence            57789999986432    12344432 11111111111   223456899999999999999998887777888887654

>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.11  E-value=1.1  Score=24.01  Aligned_cols=65  Identities=5%  Similarity=0.026  Sum_probs=37.6

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEe--CCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRD--RTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNS  103 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~  103 (197)
                      .....+.|.+... .+...+.||+-....  .......+........+.|.++.+.....|.|.|.|.
T Consensus        13 ~~G~~v~l~C~v~-~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~   79 (90)
T d1x44a1          13 YCGERVELECEVS-EDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGG   79 (90)
T ss_dssp             ETTEEEEEEEECS-SSSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETTE
T ss_pred             eCCCcEEEEEEEC-CCCceEEEEEeecccCCCCCccEEEEEeCCccEEEECccccccCEEEEEEEecc
Confidence            4566777888763 333345544322221  1112223333445567889998888888888988764

>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=82.50  E-value=0.29  Score=27.47  Aligned_cols=66  Identities=6%  Similarity=-0.112  Sum_probs=39.3

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEEeCCCC-----cEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYRDRTED-----WQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~-----~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      .....+.|.|....  +.+.  ..+.|...+..     ............+.|.++.+.....|.|.|.|..|..
T Consensus        17 ~eG~~~~l~C~~~~--~~p~--~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~   87 (105)
T d1cs6a2          17 TEGWGVMFTCSPPP--HYPA--LSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFI   87 (105)
T ss_dssp             ETTSCEEECCCCCS--EESC--CEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred             eCCCeEEEEEEccC--CCCC--CEEEEEEeeccccccccceeeeecCCCEEeecccccccCcEEEEEEEECCCCE
Confidence            45678888887532  1111  13445422111     0111223334468999999999999999999988753

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=81.65  E-value=1.3  Score=23.80  Aligned_cols=29  Identities=3%  Similarity=-0.010  Sum_probs=24.8

Q ss_pred             cccEEEECCCCCCCEEEEEEEEEcCCcCC
Q psy9139          79 EYREFTLTQLKCGTHYKINIKLVNSIGES  107 (197)
Q Consensus        79 ~~~~~~i~~L~p~~~y~~~v~a~~~~g~~  107 (197)
                      ....+.|.++.......|.|.|.|..|..
T Consensus        56 ~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~   84 (94)
T d1biha1          56 DEGSLVFLRPQASDEGHYQCFAETPAGVA   84 (94)
T ss_dssp             TSCCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             cceEEEEeccChhcCeEEEEEEEeCCCEE
Confidence            34568999999999999999999999863

>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.61  E-value=2.8  Score=22.50  Aligned_cols=66  Identities=11%  Similarity=0.017  Sum_probs=40.0

Q ss_pred             ecCCeEEEEeeeCCCCCccccEEEEEEE-eCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCC
Q psy9139          38 TTTHSISILWKPSYDGGAIITHYIVSYR-DRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSI  104 (197)
Q Consensus        38 ~~~~~~~l~W~~~~~~~~~i~~y~v~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~  104 (197)
                      .....+.|.+... .+...+.||+-... ........+........+.|.++.......|.|.|.|..
T Consensus        19 ~~G~~v~l~c~v~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~n~~   85 (94)
T d1pd6a_          19 SKGHKIRLTVELA-DHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEK   85 (94)
T ss_dssp             ETTSCEEEEEECS-SSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETTEE
T ss_pred             CcCCeEEEEEEEC-CCCceEEEEEcCccceeeeeeEeeeccCCeEEeecCCCCceecEEEEEEEeeEE
Confidence            4567888888753 23333555432222 112222233334556679999999999999999987643

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.12  E-value=2.7  Score=22.00  Aligned_cols=60  Identities=8%  Similarity=0.081  Sum_probs=39.7

Q ss_pred             cCCeEEEEeeeCCCCCccccEEEEEEEeCCCCcEEEEeCCcccEEEECCCCCCCEEEEEEEEEcCCcCCC
Q psy9139          39 TTHSISILWKPSYDGGAIITHYIVSYRDRTEDWQSVHVDAEYREFTLTQLKCGTHYKINIKLVNSIGESK  108 (197)
Q Consensus        39 ~~~~~~l~W~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~y~~~v~a~~~~g~~~  108 (197)
                      ...++.|.|.....+..     .+.|........     .....+.|.++.......|.|.|.|..|...
T Consensus        13 ~G~~~~L~C~~~g~p~P-----~i~W~~~~~~~~-----~~~~~l~i~~v~~~DsG~Y~C~a~N~~g~~~   72 (84)
T d2nxyb2          13 QGQSLTLTLESPPGSSP-----SVQCRSPRGKNI-----QGGKTLSVSQLELQDSGTWTCTVLQNQKKVE   72 (84)
T ss_dssp             TTCCEEEEEECCTTCCC-----EEEEECTTCCEE-----EESSEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CCCeEEEEEEeEcCCch-----heEEEeecccce-----eeeeeeeeeecccccccEEEEEEEeCCCEEE
Confidence            46678888876432221     355654333211     1244688999999999999999999988643