Psyllid ID: psy949

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
Protein Sequence
MSNSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLKSPPSRPSSNYHKAFSFHGKSQDTSNSFDFLTSSSTHPTHTNGFTTSSISSTFPSEPLPSSQPKVLSTFMNHSQPPPLSPRKLNNTESKQNLPLNNLPVNAPRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQVSSNSSSSEFNSEAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccccccHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccEEccccccccccccccccccccccccccccEEEEEEccccEEEEEEEcccccEEEEEEEcccEEEEEccccccccccccccccccccccEEcccccEEEEEEcccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcccccccHHHHHHccHHHHHccccHHHHHHHHHHHHHHccccccccccEEEEEccccccEEcccccEccccccccccccEEEEEEccccHEEEEEcccccccEEEEEccccEEEEEEccEEEEEEEEccccccHHccccEcccccEEEEEEEcccccccccccccccccccccEEEEEEEEccccccccEEEEccccccccccccccccccccccccccccccccccHHccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEHEEHcccccccccccccccccccccccccccccccccccccccccccccHcccccccEEccccccccEcccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHcccccccccHHHccccEccccccHHHHHHHHHHHHHccccccccccccEEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcc
Coil and Loop (DISEMBL)
msnsvrhqssyqDKLLyeydhwddaihgfreterskwnEENTKIIARVqnlafppnvtpiQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRslyvmkddaryKFTHEVLENErsyfgdlfvprgrrisvicrntpdpslidsssdtstnnnpyasmfyiffqprlpepdlirldssddvlptssqcagvenplypyfvpknlqpqpekqeeasgsnsssnsfkQNMDFfsnlsnssssqlksppsrpssnyhkafsfhgksqdtsnsfdfltsssthpthtngfttssisstfpseplpssqpkvlstfmnhsqppplsprklnnteskqnlplnnlpvnaprlplvptvgppsylsypkppvlnngfshpvqvsrppsylsypkppvlnngfshpvqvssnssssefnsEAKDFFDsilnnnsttypsvaqrngvfaskpststYASRAAFLneqlgpavpsiapkksvictsrrhkifwwksnkspcakFVLHVRSFMRSSQKYIRAAFLneqlgpavpsiapknvcriywnp
Flexible Loop (DISEMBL)
MSNSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARvqnlafppnVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVllkqrslyvmkDDARYKFThevlenersyfgdlfvprGRRISVICrntpdpslidsssdtstnNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLKSPPSRPSSNYHKAFSFHGKSQDTSNSFDFLTSSSTHPTHTNGFTTSSISSTFPSEPLPSSQPKVLSTFMNHSQPPPLSPRKLNNTESKQNLPLNNLPVNAPRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQVSSNSSSSEFNSEAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEqlgpavpsiapkksvICTSRRHKifwwksnkspcAKFVLHVRSFMRSSQKYIRAAFLNEqlgpavpsiapknvcriywnp
Low Complexity Region (SEG)
MSNSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNtpdpslidsssdtstnnnpYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQPQPEKQEEAsgsnsssnsFKQNMDFFsnlsnssssqlksppsrpssNYHKAFSFHGKSQDTSNSFDFLTSSSTHPTHTNGFttssisstFPSEPLPSSQPKVLSTFMNHSQPPPLSPRKLNNTESKQnlplnnlpvnaprlplvpTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQVssnssssefnseAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Disordered region (IsUnstruct)
************DKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN*******************YASMFYIFFQPRLPEPDLIRL***********QCAGVENPLYPYFV************************************************************************************************************************************************************************************************************************************************************AFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYW**
Disordered Region (DISOPRED)
**NSV**QSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTP*******************SMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFV**********************************************************************DFLTSSSTHPTHTNGFTT******************************************************APRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFS*******************DFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Disordered Region (DISEMBL)
***********QDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQ*****************SFKQNMDFFSN********************HKAFSFHGKSQDTSNSFDFLTSSSTHPTHTNGFTTSSI*************PKVLSTFMNHSQPPPLSPRKLNNTESKQNLPLNNLPVNAPRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHP**************EAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Disordered Region (DISPRO)
****VRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQ****************************************************************************************************KVLS*F*NHSQPPPLS***********NLPLNNLPVNAPRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQVS***S***FNSEAKDFFDSILNNNSTTYPSV**R***FASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVPKNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLKSPPSRPSSNYHKAFSFHGKSQDTSNSFDFLTSSSTHPTHTNGFTTSSISSTFPSEPLPSSQPKVLSTFMNHSQPPPLSPRKLNNTESKQNLPLNNLPVNAPRLPLVPTVGPPSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQVSSNSSSSEFNSEAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLNEQLGPAVPSIAPKKSVICTSRRHKIFWWKSNKSPCAKFVLHVRSFMRSSQKYIRAAFLNEQLGPAVPSIAPKNVCRIYWNP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	569	2.2.26 [Sep-21-2011]
Q9BT30	221	Alpha-ketoglutarate-depen	yes	N/A	0.258	0.665	0.564	5e-47
Q2M2S8	221	Alpha-ketoglutarate-depen	yes	N/A	0.258	0.665	0.564	1e-46
Q9D6Z0	221	Alpha-ketoglutarate-depen	yes	N/A	0.258	0.665	0.571	2e-44
Q5UR03	210	Uncharacterized protein L	N/A	N/A	0.154	0.419	0.340	2e-06

>sp|Q9BT30|ALKB7_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Homo sapiens GN=ALKBH7 PE=2 SV=1

 Score =  189 bits (480), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 113/154 (73%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207

Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -

>sp|Q2M2S8|ALKB7_BOVIN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Bos taurus GN=ALKBH7 PE=2 SV=1

 Score =  187 bits (476), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 114/154 (74%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILRRVQAAAFGPGQTLLSSVHVLDLEPQGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDS++FCG+TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSIKFCGSTIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207

Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9D6Z0|ALKB7_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Mus musculus GN=Alkbh7 PE=2 SV=1

 Score =  181 bits (459), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S W++ +  I+ RV+  AF P+ + +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSCWSDASQVILQRVRAAAFGPDQSLLSPVHVLDLEPRGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDSV+FCG+TIAGLSLLS SVMKLV  +   Q + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSVKFCGSTIAGLSLLSPSVMKLVHTQEPEQWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  VPRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGEHRVPRGRRISVICRSLPE 207

Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L905 PE=4 SV=1

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%)

Query: 81  IKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 140
           +K H D   +  N I GLSL S ++M+    K   ++  + +  RSLY++KDDARY + H
Sbjct: 105 LKPHFDRKDYYQNVIIGLSLGSGTIMEFYKNKPIPEKKKIYIPPRSLYIIKDDARYIWKH 164

Query: 141 EVLENERSYFGDLFVPRGRRISVICRNT 168
            +   +        +PR  RIS+  RN 
Sbjct: 165 GIPPRKYDEINGKKIPRETRISITFRNV 192


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.129    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,887,208
Number of Sequences: 539616
Number of extensions: 9782163
Number of successful extensions: 33058
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 787
Number of HSP's that attempted gapping in prelim test: 28525
Number of HSP's gapped (non-prelim): 3570
length of query: 569
length of database: 191,569,459
effective HSP length: 123
effective length of query: 446
effective length of database: 125,196,691
effective search space: 55837724186
effective search space used: 55837724186
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)

Acanthamoeba polyphaga (taxid: 5757)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	569
270012018	585	hypothetical protein TcasGA2_TC006115 [T	0.268	0.261	0.581	1e-48
189239805	230	PREDICTED: similar to CG14130 CG14130-PA	0.268	0.665	0.581	6e-48
444511956	221	putative alpha-ketoglutarate-dependent d	0.258	0.665	0.590	2e-46
62955187	233	alkylated DNA repair protein alkB homolo	0.256	0.626	0.581	5e-46
291224759	245	PREDICTED: spermatogenesis associated 11	0.263	0.612	0.566	7e-46
296232653	221	PREDICTED: probable alpha-ketoglutarate-	0.258	0.665	0.571	1e-45
431922360	221	Alkylated DNA repair protein alkB like p	0.258	0.665	0.571	2e-45
109123098	221	PREDICTED: alkylated DNA repair protein	0.258	0.665	0.564	2e-45
403295990	221	PREDICTED: probable alpha-ketoglutarate-	0.258	0.665	0.571	2e-45
14150066	221	alpha-ketoglutarate-dependent dioxygenas	0.258	0.665	0.564	3e-45

>gi|270012018|gb|EFA08466.1| hypothetical protein TcasGA2_TC006115 [Tribolium castaneum]

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/160 (58%), Positives = 120/160 (75%), Gaps = 7/160 (4%)

Query: 11  YQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQ 70
           Y  +L YE+DHWDDAIHG+RETER  WNE NTKI+ RV+ +AFPP+V  +++VH+LDL++
Sbjct: 432 YMSELKYEFDHWDDAIHGYRETERLNWNEANTKILNRVREIAFPPSVAQLRHVHILDLDK 491

Query: 71  KGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVM 130
            GYIK H       +D+VRFCG+TIAGLSLLSDSVM+LV +K K     +LLK+RSLY+M
Sbjct: 492 NGYIKPH-------IDAVRFCGDTIAGLSLLSDSVMRLVHDKNKAIYANILLKKRSLYIM 544

Query: 131 KDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
           +  AR+ +THE+L N  S F    V + RRISVICRN P+
Sbjct: 545 RGTARFDYTHEILANNCSNFKGDKVVKDRRISVICRNEPN 584

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239805|ref|XP_001812052.1| PREDICTED: similar to CG14130 CG14130-PA [Tribolium castaneum]

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 93/160 (58%), Positives = 120/160 (75%), Gaps = 7/160 (4%)

Query: 11  YQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQ 70
           Y  +L YE+DHWDDAIHG+RETER  WNE NTKI+ RV+ +AFPP+V  +++VH+LDL++
Sbjct: 77  YMSELKYEFDHWDDAIHGYRETERLNWNEANTKILNRVREIAFPPSVAQLRHVHILDLDK 136

Query: 71  KGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVM 130
            GYIK H       +D+VRFCG+TIAGLSLLSDSVM+LV +K K     +LLK+RSLY+M
Sbjct: 137 NGYIKPH-------IDAVRFCGDTIAGLSLLSDSVMRLVHDKNKAIYANILLKKRSLYIM 189

Query: 131 KDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
           +  AR+ +THE+L N  S F    V + RRISVICRN P+
Sbjct: 190 RGTARFDYTHEILANNCSNFKGDKVVKDRRISVICRNEPN 229

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|444511956|gb|ELV10006.1| putative alpha-ketoglutarate-dependent dioxygenase ABH7 [Tupaia chinensis]

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 114/154 (74%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RV+  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVKEAAFGPGQTLLSRVHVLDLEPRGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDSV+FCG TIAGLSLLS SVM+LVD +  ++ + +LL   SLY+++  ARY
Sbjct: 121 H-------VDSVKFCGGTIAGLSLLSPSVMRLVDTQEPSEWLELLLDPGSLYILRGPARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
           +F+HE+L +E SYFG+  VPRGRRISVICR  PD
Sbjct: 174 EFSHEILRDEESYFGEQRVPRGRRISVICRALPD 207

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|62955187|ref|NP_001017609.1| alkylated DNA repair protein alkB homolog 7 [Danio rerio] gi|62204928|gb|AAH93288.1| Zgc:112404 [Danio rerio]

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/153 (58%), Positives = 115/153 (75%), Gaps = 7/153 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YE+DHWDDAIHG+RETER +W   +  I+ RV+ +AFP     +  VHVLDL++KGYIK 
Sbjct: 87  YEFDHWDDAIHGYRETERLQWGAASENILRRVRTVAFPEGSPLLGPVHVLDLDKKGYIKP 146

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       +DSV+FCG+TIAGLSLLSDS+M+LV E   T  + +LL +RSLY+++DDAR+
Sbjct: 147 H-------IDSVKFCGSTIAGLSLLSDSIMRLVPENNTTDRVDLLLSRRSLYILRDDARF 199

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTP 169
           KFTHE+L++E S+F    VPR RRISVICRN P
Sbjct: 200 KFTHEILKDEESFFSGQKVPRHRRISVICRNLP 232

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291224759|ref|XP_002732369.1| PREDICTED: spermatogenesis associated 11-like [Saccoglossus kowalevskii]

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 116/157 (73%), Gaps = 7/157 (4%)

Query: 11  YQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQ 70
           Y  ++ YEYDHWDDAIHG++ETE S+W++ N +II RV+++AFPP V  +  VHV+DL  
Sbjct: 91  YVKRMRYEYDHWDDAIHGYKETEFSRWSDSNKQIIQRVRDVAFPPGVQQLPLVHVIDL-- 148

Query: 71  KGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVM 130
                A  GYIK H+DSV+FCGN I GLSLLS S+M+LV +K K  +I +LLK RSLYVM
Sbjct: 149 -----ADNGYIKPHIDSVKFCGNIITGLSLLSSSIMRLVHDKNKELKIDILLKPRSLYVM 203

Query: 131 KDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN 167
           +D AR+ +THE+L +  SYF    VPR RRIS++CRN
Sbjct: 204 RDAARFDYTHEILPDSESYFKGRHVPRARRISIMCRN 240

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|296232653|ref|XP_002761669.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH7 [Callithrix jacchus]

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ +AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAVAFGPGQTLLSSVHVLDLEARGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDSV+FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSVKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERQIPRGRRISVICRSLPE 207

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|431922360|gb|ELK19451.1| Alkylated DNA repair protein alkB like protein 7 [Pteropus alecto]

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ R+Q  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRMQAAAFGPGQTLLSSVHVLDLEPRGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++D ARY
Sbjct: 121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQKPGEWLELLLEPGSLYILRDSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  VPRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRVPRGRRISVICRSLPE 207

Source: Pteropus alecto

Species: Pteropus alecto

Genus: Pteropus

Family: Pteropodidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|109123098|ref|XP_001087443.1| PREDICTED: alkylated DNA repair protein alkB homolog 7 [Macaca mulatta]

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 113/154 (73%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+ +W+E +  I+ RVQ  AF P  TP+  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKWRWSEASRAILQRVQAAAFGPGQTPLSSVHVLDLEARGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQDPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403295990|ref|XP_003938904.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH7 [Saimiri boliviensis boliviensis]

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 113/154 (73%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDSV+FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSVKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|14150066|ref|NP_115682.1| alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 precursor [Homo sapiens] gi|114674893|ref|XP_001149298.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH7 [Pan troglodytes] gi|397497153|ref|XP_003819380.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH7 [Pan paniscus] gi|74733083|sp|Q9BT30.1|ALKB7_HUMAN RecName: Full=Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7; AltName: Full=Alkylated DNA repair protein alkB homolog 7; AltName: Full=Spermatogenesis cell proliferation-related protein; AltName: Full=Spermatogenesis-associated protein 11; Flags: Precursor gi|13325152|gb|AAH04393.1| AlkB, alkylation repair homolog 7 (E. coli) [Homo sapiens] gi|37182834|gb|AAQ89217.1| AGTG6002 [Homo sapiens] gi|38570371|gb|AAR24624.1| spermatogenesis cell proliferation related protein [Homo sapiens] gi|119589508|gb|EAW69102.1| alkB, alkylation repair homolog 7 (E. coli) [Homo sapiens] gi|189065173|dbj|BAG34896.1| unnamed protein product [Homo sapiens] gi|410217346|gb|JAA05892.1| alkB, alkylation repair homolog 7 [Pan troglodytes] gi|410250752|gb|JAA13343.1| alkB, alkylation repair homolog 7 [Pan troglodytes] gi|410293434|gb|JAA25317.1| alkB, alkylation repair homolog 7 [Pan troglodytes]

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 113/154 (73%), Gaps = 7/154 (4%)

Query: 17  YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
           YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120

Query: 77  HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
           H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct: 121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query: 137 KFTHEVLENERSYFGDLFVPRGRRISVICRNTPD 170
            F+HE+L +E S+FG+  +PRGRRISVICR+ P+
Sbjct: 174 DFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	569
ZFIN|ZDB-GENE-050417-78	233	alkbh7 "alkB, alkylation repai	0.258	0.630	0.577	3.1e-44
RGD|1598126	221	Alkbh7 "alkB, alkylation repai	0.253	0.651	0.589	2.5e-42
UNIPROTKB|F1SBT3	221	ALKBH7 "Uncharacterized protei	0.253	0.651	0.569	5.2e-42
UNIPROTKB|Q2M2S8	221	ALKBH7 "Alpha-ketoglutarate-de	0.253	0.651	0.569	1.1e-41
UNIPROTKB|E2QVM9	221	ALKBH7 "Uncharacterized protei	0.253	0.651	0.576	1.1e-41
UNIPROTKB|Q9BT30	221	ALKBH7 "Alpha-ketoglutarate-de	0.253	0.651	0.569	1.7e-41
MGI|MGI:1913650	221	Alkbh7 "alkB, alkylation repai	0.253	0.651	0.576	7.5e-41
UNIPROTKB|E2QUX1	255	ALKBH7 "Uncharacterized protei	0.140	0.313	0.562	2.1e-39
WB|WBGene00012920	227	Y46G5A.35 [Caenorhabditis eleg	0.261	0.656	0.452	4.1e-33
TAIR|locus:505006428	226	AT4G02485 [Arabidopsis thalian	0.282	0.712	0.278	0.00073

ZFIN|ZDB-GENE-050417-78 alkbh7 "alkB, alkylation repair homolog 7 (E. coli)" [Danio rerio (taxid:7955)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 89/154 (57%), Positives = 115/154 (74%)

Query:    14 KLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGY 73
             K  YE+DHWDDAIHG+RETER +W   +  I+ RV+ +AFP     +  VHVLDL++KGY
Sbjct:    84 KKRYEFDHWDDAIHGYRETERLQWGAASENILRRVRTVAFPEGSPLLGPVHVLDLDKKGY 143

Query:    74 IKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDD 133
             IK H       +DSV+FCG+TIAGLSLLSDS+M+LV E   T  + +LL +RSLY+++DD
Sbjct:   144 IKPH-------IDSVKFCGSTIAGLSLLSDSIMRLVPENNTTDRVDLLLSRRSLYILRDD 196

Query:   134 ARYKFTHEVLENERSYFGDLFVPRGRRISVICRN 167
             AR+KFTHE+L++E S+F    VPR RRISVICRN
Sbjct:   197 ARFKFTHEILKDEESFFSGQKVPRHRRISVICRN 230

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

RGD|1598126 Alkbh7 "alkB, alkylation repair homolog 7 (E. coli)" [Rattus norvegicus (taxid:10116)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 89/151 (58%), Positives = 112/151 (74%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S W++ +  I+ RV+  AF P+ T +  VHVLDLE       
Sbjct:    61 YEYDHWDSAIHGFRETEKSCWSDASQAILQRVRAAAFGPDQTLLSLVHVLDLE------- 113

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H+GYIK HVDSV+FCG+TIAGLSLLS SVMKLV  +   Q + +LL+  SLY+++  ARY
Sbjct:   114 HRGYIKPHVDSVKFCGSTIAGLSLLSPSVMKLVHTQEPEQWLELLLEPGSLYILRGSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG   VPRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGAHRVPRGRRISVICRS 204

GO:0005739 "mitochondrion" evidence=ISO

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=ISO

UNIPROTKB|F1SBT3 ALKBH7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 86/151 (56%), Positives = 113/151 (74%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  + +  VHVLDLE +GYIK 
Sbjct:    61 YEYDHWDAAIHGFRETEKSRWSEASRVILQRVQAAAFGPGQSLLSSVHVLDLEPRGYIKP 120

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H       VDS++FCG+TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++D ARY
Sbjct:   121 H-------VDSIKFCGSTIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRDSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG+  +PRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGERRIPRGRRISVICRS 204

GO:0005739 "mitochondrion" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

UNIPROTKB|Q2M2S8 ALKBH7 "Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7" [Bos taurus (taxid:9913)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 86/151 (56%), Positives = 112/151 (74%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct:    61 YEYDHWDAAIHGFRETEKSRWSEASRAILRRVQAAAFGPGQTLLSSVHVLDLEPQGYIKP 120

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H       VDS++FCG+TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct:   121 H-------VDSIKFCGSTIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG+  +PRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGERRIPRGRRISVICRS 204

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

UNIPROTKB|E2QVM9 ALKBH7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 87/151 (57%), Positives = 111/151 (73%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct:    61 YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFSPGQTLLSSVHVLDLEPRGYIKP 120

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct:   121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG+  VPRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGERRVPRGRRISVICRS 204

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

UNIPROTKB|Q9BT30 ALKBH7 "Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7" [Homo sapiens (taxid:9606)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 86/151 (56%), Positives = 111/151 (73%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S+W+E +  I+ RVQ  AF P  T +  VHVLDLE +GYIK 
Sbjct:    61 YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H       VDS++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY
Sbjct:   121 H-------VDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG+  +PRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGERRIPRGRRISVICRS 204

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

MGI|MGI:1913650 Alkbh7 "alkB, alkylation repair homolog 7 (E. coli)" [Mus musculus (taxid:10090)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 87/151 (57%), Positives = 112/151 (74%)

Query:    17 YEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKA 76
             YEYDHWD AIHGFRETE+S W++ +  I+ RV+  AF P+ + +  VHVLDLE +GYIK 
Sbjct:    61 YEYDHWDAAIHGFRETEKSCWSDASQVILQRVRAAAFGPDQSLLSPVHVLDLEPRGYIKP 120

Query:    77 HKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 136
             H       VDSV+FCG+TIAGLSLLS SVMKLV  +   Q + +LL+  SLY+++  ARY
Sbjct:   121 H-------VDSVKFCGSTIAGLSLLSPSVMKLVHTQEPEQWLELLLEPGSLYILRGSARY 173

Query:   137 KFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              F+HE+L +E S+FG+  VPRGRRISVICR+
Sbjct:   174 DFSHEILRDEESFFGEHRVPRGRRISVICRS 204

GO:0005576 "extracellular region" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|E2QUX1 ALKBH7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 230 (86.0 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
 Identities = 45/80 (56%), Positives = 62/80 (77%)

Query:    88 VRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENER 147
             ++FCG TIAGLSLLS SVM+LV  +   + + +LL+  SLY+++  ARY F+HE+L +E 
Sbjct:   159 LQFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEE 218

Query:   148 SYFGDLFVPRGRRISVICRN 167
             S+FG+  VPRGRRISVICR+
Sbjct:   219 SFFGERRVPRGRRISVICRS 238

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

WB|WBGene00012920 Y46G5A.35 [Caenorhabditis elegans (taxid:6239)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 72/159 (45%), Positives = 106/159 (66%)

Query:    11 YQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQ 70
             +  +L YE  HWDDAIH +RE E+ KW +EN ++I+R+++ +F  N   + YVH+LDL  
Sbjct:    54 HMKRLRYEKSHWDDAIHLYREREQRKWRDENLEVISRIRSESFGANTEHLTYVHILDL-- 111

Query:    71 KGYIKAHK-GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEIL-VLLKQRSLY 128
                   HK G IK H+D++R+CG+ I G+SLLSD++M+L  +  K + I+ +L+ +RSLY
Sbjct:   112 ------HKDGVIKPHIDAIRYCGDVITGVSLLSDAIMRLRHKDQKDELIMDLLMPRRSLY 165

Query:   129 VMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN 167
              +    RY FTHEVL  + S +    VPR RRIS+ICR+
Sbjct:   166 RLGGPGRYDFTHEVLGEQESVWNGEQVPRERRISIICRD 204

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:505006428 AT4G02485 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
 Identities = 47/169 (27%), Positives = 82/169 (48%)

Query:     4 SVRHQSSYQDKLLYEYDHWDDAIH-GFRETERSKWNEENTKIIAR-VQNLAFPPNVTPIQ 61
             S+ HQS     +L E    +++I+   R  +   W  E + +I   ++++  P     + 
Sbjct:    55 SIAHQSHLLSAILNEGWFVEESINQAMRFGDLPSWATELSDLIRETLESVDLPVLSADLL 114

Query:    62 YVHVL-DLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVD-EKTKTQEIL 119
             +   L D       +  +G I AHVD +RF  + IA +SL S  VM+    EK + + + 
Sbjct:   115 WREPLFDQLIVNLYQPGEG-ICAHVDLLRF-EDGIAIVSLESPCVMRFSPAEKNEYEAVD 172

Query:   120 VLLKQRSLYVMKDDARYKFTHEVLENERSY--FGDLFVPRGRRISVICR 166
             VLL   SL +M  +ARY++ HE+   +  +  +    + + RRIS+  R
Sbjct:   173 VLLNPGSLILMSGEARYRWKHEINRKQNGFQLWEGEEIDQKRRISITLR 221


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      569       483   0.00080  119 3  11 22  0.41    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  298 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.33u 0.11s 41.44t   Elapsed:  00:00:02
  Total cpu time:  41.34u 0.11s 41.45t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:26:34 2013   End:  Thu Aug 15 16:26:36 2013

GO:0005634 "nucleus" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9D6Z0	ALKB7_MOUSE	1, ., 1, 4, ., 1, 1, ., -	0.5714	0.2583	0.6651	yes	N/A
Q2M2S8	ALKB7_BOVIN	1, ., 1, 4, ., 1, 1, ., -	0.5649	0.2583	0.6651	yes	N/A
Q9BT30	ALKB7_HUMAN	1, ., 1, 4, ., 1, 1, ., -	0.5649	0.2583	0.6651	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	569
COG5099	777	COG5099, COG5099, RNA-binding protein of the Puf f	4e-04

>gnl|CDD|227430 COG5099, COG5099, RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis]

 Score = 42.8 bits (101), Expect = 4e-04
 Identities = 47/242 (19%), Positives = 74/242 (30%), Gaps = 26/242 (10%)

Query: 166 RNTPDPSLIDSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSS-DDVLPTSSQCAGVE 224
            N    S I++ + +S+                   P L  L    + ++  SS  A   
Sbjct: 162 TNQSGSSFINTPASSSSQPLTNLV-----VSSIKRFPYLTSLSPFFNYLIDPSSDSATAS 216

Query: 225 NPLYPYFVPKNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLKSPPSRPSSN 284
               P F P             S +N  S S    +    ++ N+      S  +  +S 
Sbjct: 217 ADTSPSFNPPP---------NLSPNNLFSTSDLSPLPDTQSVENNIILNSSSSINELTSI 267

Query: 285 YHKAFSFHGKSQDTSNSFDFLTSSSTHPTHTN-----GFTTSSISSTFPSEPLPSSQPKV 339
           Y    S        S    FL  SS+    +         T S S+   +  LP S P  
Sbjct: 268 YGSVPSIRNLRGLNSALVSFLNVSSSSLAFSALNGKEVSPTGSPSTRSFARVLPKSSPNN 327

Query: 340 LST-----FMNHSQP-PPLSPRKLNNTESKQNLPLNNLPVNAPRLPLVPTVGPPSYLSYP 393
           L T      +N  Q  P L      +T +  +L   +  +N  +     T+   S L Y 
Sbjct: 328 LLTEILTTGVNPPQSLPSLLNPVFLSTSTGFSLTNLSGYLNPNKNLKKNTLSSLSNLGYS 387

Query: 394 KP 395
             
Sbjct: 388 SN 389

Length = 777

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	569
PF13532	194	2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily;	99.94
PRK15401	213	alpha-ketoglutarate-dependent dioxygenase AlkB; Pr	99.88
KOG3200|consensus	224		99.82
TIGR00568	169	alkb DNA alkylation damage repair protein AlkB. Pr	99.75
COG3145	194	AlkB Alkylated DNA repair protein [DNA replication	99.69
KOG4176|consensus	323		99.6
KOG3959|consensus	306		99.48
PF03171	98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	97.69
PF13640	100	2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;	94.85
smart00702	178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	94.44
KOG1331|consensus	293		94.38
KOG2731|consensus	378		92.98
PRK05467	226	Fe(II)-dependent oxygenase superfamily protein; Pr	91.68
PF09859	173	Oxygenase-NA: Oxygenase, catalysing oxidative meth	91.32
PF12933	253	FTO_NTD: FTO catalytic domain; InterPro: IPR024367	85.53
KOG4176|consensus	323		85.04
PF12851	171	Tet_JBP: Oxygenase domain of the 2OGFeDO superfami	81.76

>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A

Probab=99.94  E-value=6.5e-27  Score=210.33  Aligned_cols=128  Identities=26%  Similarity=0.310  Sum_probs=94.3

Q ss_pred             cccccCCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCC-CCCeEEEEecCCCeEEEE
Q psy949           30 RETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRF-CGNTIAGLSLLSDSVMKL  108 (569)
Q Consensus        30 RE~E~spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~-fGpvIASLSLGS~rVM~F  108 (569)
                      ++....+|++.+..+++++...........+|+++||+|.+|+       +|++|+|+... +|++|++||||++|+|.|
T Consensus        66 ~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~-------~i~~H~D~~~~~~~~~I~slSLG~~~~~~f  138 (194)
T PF13532_consen   66 RSKPWPPFPEWLSRLLERLVEATGIPPGWRPNQCLINYYRDGS-------GIGPHSDDEEYGFGPPIASLSLGSSRVFRF  138 (194)
T ss_dssp             CCCEBSCCHHHHHHHHHHHHHHHT-SHSS--SEEEEEEESSTT--------EEEE---TTC-CCSEEEEEEEES-EEEEE
T ss_pred             CCCCCCCccHHHHHHHHHHHHHhccccCCCCCEEEEEecCCCC-------CcCCCCCcccccCCCcEEEEEEccCceEEE
Confidence            4556678888899999999764321112367899999988765       99999999977 899999999999999999


Q ss_pred             EecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEec
Q psy949          109 VDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICR  166 (569)
Q Consensus       109 R~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR  166 (569)
                      +........++|.|++||||||+|++|+.| |+|++.+.+..+.. +.+++|||||||
T Consensus       139 ~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~-H~I~~~~~~~~~~~-~~~~~RislTfR  194 (194)
T PF13532_consen  139 RNKSDDDEPIEVPLPPGSLLVMSGEARYDW-HGIPPVKKDTHPSH-YVRGRRISLTFR  194 (194)
T ss_dssp             EECGGTS-EEEEEE-TTEEEEEETTHHHHE-EEE-S-SCEEEEST-EE-S-EEEEEEE
T ss_pred             eeccCCCccEEEEcCCCCEEEeChHHhhhe-eEcccccCCccccc-cCCCCEEEEEeC
Confidence            998666789999999999999999999999 99999875432222 578999999999

...

>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional

Probab=99.88  E-value=1.9e-22  Score=194.22  Aligned_cols=135  Identities=19%  Similarity=0.214  Sum_probs=106.4

Q ss_pred             Cchhhhcccccccc-----CCCCh---hHHHHHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcccCCCC-CCC
Q psy949           21 HWDDAIHGFRETER-----SKWNE---ENTKIIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDS-VRF   90 (569)
Q Consensus        21 HWDsaI~GYRE~E~-----spWpp---el~~ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs-~~~   90 (569)
                      +|..+-.+||....     .+|++   .+.+|.+++.... +..  ..+|.|+||.|.+|.       +|+||.|. +..
T Consensus        69 ~W~~d~~~YrYs~~~~~~~~pwp~~P~~l~~L~~~~~~~~~~~~--~~p~a~LvN~Y~~G~-------~mg~H~D~~E~~  139 (213)
T PRK15401         69 GWVTDRRGYRYSPIDPLTGKPWPAMPASFLALAQRAAAAAGFPG--FQPDACLINRYAPGA-------KLSLHQDKDERD  139 (213)
T ss_pred             eEecCCCCcccCCcCCCCCCCCCCchHHHHHHHHHHHHHcCCCC--CCCCEEEEEeccCcC-------ccccccCCCccc
Confidence            78766679988753     47888   7889999887554 322  356888888877654       99999996 456


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccC
Q psy949           91 CGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNT  168 (569)
Q Consensus        91 fGpvIASLSLGS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V  168 (569)
                      +++.|++||||++|+|.|++.+..+...+|.|++||||||.|++|+. .|+|++.+.+.   ....++.|||||||.+
T Consensus       140 ~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~sr~~-~HgVp~~~~~~---~p~~g~~RINLTFR~~  213 (213)
T PRK15401        140 FRAPIVSVSLGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPSRLR-YHGILPLKAGE---HPLTGECRINLTFRKA  213 (213)
T ss_pred             CCCCEEEEeCCCCeEEEecccCCCCceEEEEeCCCCEEEECchHhhe-eccCCcCCCCc---CCCCCCCeEEEEeEcC
Confidence            88999999999999999997655567889999999999999999984 49999876321   1134568999999975

>KOG3200|consensus

Probab=99.82  E-value=2.2e-20  Score=178.46  Aligned_cols=147  Identities=22%  Similarity=0.259  Sum_probs=123.9

Q ss_pred             hccccccccCCchhhhccccccccCCCChhHHHHHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcccCCCCCC
Q psy949           11 YQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVR   89 (569)
Q Consensus        11 ~LkRlRYe~gHWDsaI~GYRE~E~spWppel~~ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~   89 (569)
                      .|+.+|.+-  |..+.|.- .+.....+++++.+.++|..+. |..   ..|+|+||||.+|+       ||+||.|++.
T Consensus        43 ~L~NRRLqN--yGGvvh~~-glipeelP~wLq~~v~kinnlglF~s---~~NHVLVNeY~pgq-------GImPHtDGPa  109 (224)
T KOG3200|consen   43 VLANRRLQN--YGGVVHKT-GLIPEELPPWLQYYVDKINNLGLFKS---PANHVLVNEYLPGQ-------GIMPHTDGPA  109 (224)
T ss_pred             HHHhhhhhh--cCCccccC-CcCccccCHHHHHHHHHhhcccccCC---CcceeEeecccCCC-------CcCcCCCCCc
Confidence            567788876  77777654 6777899999999999999887 555   57999999999988       9999999976


Q ss_pred             CCCCeEEEEecCCCeEEEEEecC----C---------CCeEEEEEecCCcEEeecccccccceeccccccccCC------
Q psy949           90 FCGNTIAGLSLLSDSVMKLVDEK----T---------KTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYF------  150 (569)
Q Consensus        90 ~fGpvIASLSLGS~rVM~FR~kk----~---------~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~------  150 (569)
                      + -++|++|||||.+||+|...-    +         ....+.+.|++|||||++|+++.++.|||....+|..      
T Consensus       110 f-~piVstiSlGsh~vldf~~p~r~e~~d~te~~dqp~R~~fsllleprslLilkd~aYtd~LHgIs~s~~d~l~~~~sn  188 (224)
T KOG3200|consen  110 F-HPIVSTISLGSHTVLDFYDPVRQEVNDGTESKDQPLRYLFSLLLEPRSLLILKDDAYTDFLHGISDSPTDCLNQVVSN  188 (224)
T ss_pred             c-cceEEEEecCCceEEecccccccccCCccccCCCCccceeeeeeccceEEEEcCcHHHHHHhhcccChHHHHHHHhhh
Confidence            5 479999999999999998732    1         1356889999999999999999999999998776542      


Q ss_pred             --------CCccccCCCeEEEEeccCCCC
Q psy949          151 --------GDLFVPRGRRISVICRNTPDP  171 (569)
Q Consensus       151 --------dG~~v~RgrRISLTFR~V~p~  171 (569)
                              +|..+.|++|||||+|.|++.
T Consensus       189 a~ac~s~k~Gd~lvr~tRvSLTiR~VPkv  217 (224)
T KOG3200|consen  189 ALACSSRKDGDKLVRQTRVSLTIRLVPKV  217 (224)
T ss_pred             hhhccccCCcceeeecceeEEEEecchHH
Confidence                    577778899999999999754

>TIGR00568 alkb DNA alkylation damage repair protein AlkB

Probab=99.75  E-value=6.6e-18  Score=157.21  Aligned_cols=98  Identities=16%  Similarity=0.138  Sum_probs=80.7

Q ss_pred             CCCChhHHHHHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcccCCCCCC-CCCCeEEEEecCCCeEEEEEecC
Q psy949           35 SKWNEENTKIIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVR-FCGNTIAGLSLLSDSVMKLVDEK  112 (569)
Q Consensus        35 spWppel~~ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~-~fGpvIASLSLGS~rVM~FR~kk  112 (569)
                      .+|++.+.+|.+++++.. +..  ..+|+|+||.|.+|       |+|+||+|... .++++|++||||++|+|.|++++
T Consensus        70 p~~P~~L~~L~~~v~~~~g~~~--~~~n~~LvN~Y~~G-------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~  140 (169)
T TIGR00568        70 PAMPQDLGDLCERVATAAGFPD--FQPDACLVNRYAPG-------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLK  140 (169)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCC--CCCCEEEEEeecCC-------CccccccccccccCCCCEEEEeCCCCEEEEecCCc
Confidence            457899999999998664 322  35788988886654       49999999633 35679999999999999999886


Q ss_pred             CCCeEEEEEecCCcEEeecccccccceecc
Q psy949          113 TKTQEILVLLKQRSLYVMKDDARYKFTHEV  142 (569)
Q Consensus       113 ~~g~kVsV~LPpRSLLIMSGEARY~WtHGI  142 (569)
                      .++...+|.|++||||||+|++|+ +.|||
T Consensus       141 ~~~~~~~l~L~sGsllvM~G~sR~-~~Hgv  169 (169)
T TIGR00568       141 RNDPPKRLRLHSGDVVIMGGESRL-AFHGV  169 (169)
T ss_pred             CCCceEEEEeCCCCEEEECCchhc-cccCC
Confidence            666789999999999999999999 55987

Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).

>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]

Probab=99.69  E-value=6.2e-17  Score=154.84  Aligned_cols=115  Identities=18%  Similarity=0.268  Sum_probs=90.8

Q ss_pred             chhhhcccccccc-----CCCChhHHHHHHHHH-hcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCCC-e
Q psy949           22 WDDAIHGFRETER-----SKWNEENTKIIARVQ-NLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGN-T   94 (569)
Q Consensus        22 WDsaI~GYRE~E~-----spWppel~~ILdRVr-slaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGp-v   94 (569)
                      |-.++.|||....     .+| +.+..+...+. +..+...  ..++|++|.|.+|.       +|+||.|.....+. .
T Consensus        64 W~~d~~gy~y~~~~p~~~~p~-p~l~~~~~~~~~~~g~~~~--~~ea~Lvn~Y~pGd-------~ig~HqD~~e~~~~~~  133 (194)
T COG3145          64 WVTDRRGYRYSLRSPLTGKPW-PPLLALFHDLFGAAGYPFE--GPEAVLVNRYRPGA-------SIGWHQDKDEEDDRPP  133 (194)
T ss_pred             eecccccccccccccCCCCCC-CccHHHHHHHHHHhcCCCC--ChhheeEEeccCCC-------ccccccccccccCCCc
Confidence            6666899987666     466 44444444444 3334433  35778888877754       99999998875443 6


Q ss_pred             EEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccceecccccc
Q psy949           95 IAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENE  146 (569)
Q Consensus        95 IASLSLGS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk  146 (569)
                      |++||||++|+|.|++....+...++.|.+|||+||.|++|+.|.|.|+++.
T Consensus       134 v~slSLg~~~~F~~~~~~r~~~~~~~~L~~Gdvvvm~G~~r~~~~h~~p~~~  185 (194)
T COG3145         134 VASLSLGAPCIFRLRGRRRRGPGLRLRLEHGDVVVMGGPSRLAWHHIIPKTS  185 (194)
T ss_pred             eEEEecCCCeEEEeccccCCCCceeEEecCCCEEEecCCccccccccccccc
Confidence            9999999999999999876788999999999999999999999999999986

>KOG4176|consensus

Probab=99.60  E-value=1.8e-15  Score=153.83  Aligned_cols=117  Identities=19%  Similarity=0.152  Sum_probs=88.7

Q ss_pred             HHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEecCCCeEEEEEecCCCCeEEEE
Q psy949           41 NTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILV  120 (569)
Q Consensus        41 l~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSLGS~rVM~FR~kk~~g~kVsV  120 (569)
                      +..+++|+......+.  .+|+|+||.|.+|+       ||.+|+| +..|++.|++|||.|+|+|.|++.... .....
T Consensus       192 ~~~ii~rlv~~~~ip~--~pd~~~iN~Ye~G~-------~i~ph~~-~~~F~~Pi~slS~lSe~~m~Fg~~~~~-~~~~~  260 (323)
T KOG4176|consen  192 FKSIIDRLVSWRVIPE--RPDQCTINFYEPGD-------GIPPHID-HSAFLDPISSLSFLSECTMEFGHGLLS-DNIGN  260 (323)
T ss_pred             HHHHHHHhhhhccCCC--CCCeeEEEeeCCCC-------CCCCCCC-hHHhcCceEEEEeecceeEEecccccc-cCccc
Confidence            3444555544443332  36899999999877       9999996 668999999999999999999997531 11222


Q ss_pred             EecCCcEEeecccccccceeccccccccCCCCcc-ccCCCeEEEEeccCCCCCC
Q psy949          121 LLKQRSLYVMKDDARYKFTHEVLENERSYFGDLF-VPRGRRISVICRNTPDPSL  173 (569)
Q Consensus       121 ~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~-v~RgrRISLTFR~V~p~~l  173 (569)
                      ++.     +|+++++|.|.|.|+.+..|...+.. ..+..|||||||++++...
T Consensus       261 ~~g-----~~s~p~~~g~~lvi~~~~ad~~~~~~~~~~~kRisitfrki~~~~~  309 (323)
T KOG4176|consen  261 FRG-----SLSLPLRYGSVLVIRGRSADVAPHCIRPSRNKRISITFRKIRPDPC  309 (323)
T ss_pred             ccc-----ccccccccCeEEEeCCCcccccccccCCCCCceEEEEEEEeccCCC
Confidence            222     78999999999999999988875522 3799999999999997654

>KOG3959|consensus

Probab=99.48  E-value=9.2e-15  Score=145.07  Aligned_cols=131  Identities=24%  Similarity=0.358  Sum_probs=106.0

Q ss_pred             CCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEecCCCeEEEEEecC--
Q psy949           35 SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEK--  112 (569)
Q Consensus        35 spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSLGS~rVM~FR~kk--  112 (569)
                      ..++.....++.|+.+.....+...+.|+ -+|     |++.++..|.||+|+.+.||+.++.+.+..+.|+.+-.++  
T Consensus       127 ~G~P~~~~~v~rrm~~yp~l~gfqp~EqC-nLe-----Yep~kgsaIdpH~DD~WiWGeRlv~~n~l~d~vl~lc~~e~~  200 (306)
T KOG3959|consen  127 VGMPEYADMVLRRMSEYPVLKGFQPFEQC-NLE-----YEPVKGSAIDPHQDDMWIWGERLVRSNRLFDFVLKLCSKECL  200 (306)
T ss_pred             cCCchHHHHHHHHhhccchhhccCcHHHc-Ccc-----cccccCCccCccccchhhhhhheeehhhccHHHHHhhhhhhh
Confidence            35577788999999877644444445555 477     5555688999999999999999999998888888776432  


Q ss_pred             ------------------------------CCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEE
Q psy949          113 ------------------------------TKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRIS  162 (569)
Q Consensus       113 ------------------------------~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRIS  162 (569)
                                                    .++..+.|.||+||||||.|+|||.|+|+|..+.         .++|||.
T Consensus       201 ~sg~~nL~~~~s~~~e~l~~~li~~s~~~l~~~~~~~ipmP~rSLlvl~g~aRyqwkH~vlr~h---------i~~RRvc  271 (306)
T KOG3959|consen  201 ASGIINLNTNFSESNEFLSINLINGSVMTLNKSFLCYIPMPHRSLLVLAGEARYQWKHGVLRHH---------IRGRRVC  271 (306)
T ss_pred             ccceeeeccCccccccccchhhcccchhhhccceEEEeecCcceeEEeechhHhhHHHHHHHHh---------hhhceee
Confidence                                          0256789999999999999999999999999986         7999999


Q ss_pred             EEeccCCCCCCCCCcccc
Q psy949          163 VICRNTPDPSLIDSSSDT  180 (569)
Q Consensus       163 LTFR~V~p~~lp~~~~ea  180 (569)
                      +|||...+...+..+...
T Consensus       272 vt~RE~~~~f~~Gg~~qe  289 (306)
T KOG3959|consen  272 VTMREAAKDFAEGGELQE  289 (306)
T ss_pred             eeHHhhhHhhccchhhhh
Confidence            999999988877665433

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit

Probab=97.69  E-value=6.5e-05  Score=61.87  Aligned_cols=86  Identities=14%  Similarity=0.060  Sum_probs=50.2

Q ss_pred             ceeeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEec-CCCeEEEEEecCCCCeEEEEEecCCcEEeeccc------
Q psy949           61 QYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSL-LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDD------  133 (569)
Q Consensus        61 NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSL-GS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGE------  133 (569)
                      +++.+++|.+    +..+.++++|.|..    +.+++|-+ .....+.|...+   ..+.+...++.+.|+.|+      
T Consensus         2 ~~~~~~~Y~~----~~~~~~~~~H~D~~----~~~~Til~~~~~~gL~~~~~~---~~~~v~~~~~~~~v~~G~~l~~~t   70 (98)
T PF03171_consen    2 SQLRLNRYPP----PENGVGIGPHTDDE----DGLLTILFQDEVGGLQVRDDG---EWVDVPPPPGGFIVNFGDALEILT   70 (98)
T ss_dssp             -EEEEEEE-S----CCGCEEEEEEEES------SSEEEEEETSTS-EEEEETT---EEEE----TTCEEEEEBHHHHHHT
T ss_pred             CEEEEEECCC----cccCCceeCCCcCC----CCeEEEEecccchheeccccc---cccCccCccceeeeeceeeeeccc
Confidence            4567888772    11245999999974    34444444 477788888764   667777777777777777      


Q ss_pred             --ccccceeccccccccCCCCccccCCCeEEEEecc
Q psy949          134 --ARYKFTHEVLENERSYFGDLFVPRGRRISVICRN  167 (569)
Q Consensus       134 --ARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~  167 (569)
                        .+..+.|+|....          .+.|+|+||+.
T Consensus        71 ~g~~~~~~HrV~~~~----------~~~R~s~~~f~   96 (98)
T PF03171_consen   71 NGRYPATLHRVVPPT----------EGERYSLTFFL   96 (98)
T ss_dssp             TTSS----EEEE--S----------TS-EEEEEEEE
T ss_pred             CCccCCceeeeEcCC----------CCCEEEEEEEE
Confidence              7888999998863          79999999974

The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....

>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A

Probab=94.85  E-value=0.011  Score=48.79  Aligned_cols=83  Identities=18%  Similarity=0.134  Sum_probs=49.1

Q ss_pred             eeecCCccccccCcCCcccCCCCCCCCCCeEE-EEecC------CCeEEEEEecC-CCCeEEEEE-----ecCCcEEeec
Q psy949           65 VLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIA-GLSLL------SDSVMKLVDEK-TKTQEILVL-----LKQRSLYVMK  131 (569)
Q Consensus        65 VNEYypgGY~~ArgDGIgPHVDs~~~fGpvIA-SLSLG------S~rVM~FR~kk-~~g~kVsV~-----LPpRSLLIMS  131 (569)
                      ++.|.+|+       .+.||.|....-+..++ .|-|.      ....+.|.... .......+.     ..+|+++++.
T Consensus         3 ~~~y~~G~-------~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~   75 (100)
T PF13640_consen    3 LNRYPPGG-------FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFP   75 (100)
T ss_dssp             EEEEETTE-------EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEE
T ss_pred             EEEECcCC-------EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEe
Confidence            55666665       89999998431111222 22244      22455665431 112223333     8899999999


Q ss_pred             ccccccceeccccccccCCCCccccCCCeEEEEec
Q psy949          132 DDARYKFTHEVLENERSYFGDLFVPRGRRISVICR  166 (569)
Q Consensus       132 GEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR  166 (569)
                      +   ....|++.+..         ..++|++|++-
T Consensus        76 ~---~~~~H~v~~v~---------~~~~R~~l~~~   98 (100)
T PF13640_consen   76 S---DNSLHGVTPVG---------EGGRRYSLTFW   98 (100)
T ss_dssp             S---CTCEEEEEEE----------EESEEEEEEEE
T ss_pred             C---CCCeecCcccC---------CCCCEEEEEEE
Confidence            9   67779999862         58999999863

...

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues

Probab=94.44  E-value=0.6  Score=42.60  Aligned_cols=107  Identities=18%  Similarity=0.096  Sum_probs=65.2

Q ss_pred             hhHHHHHHHHHhcCCCC--CCCCcceeeeeecCCccccccCcCCcccCCCCCCCC--CCeEEEEec-------CCCeEEE
Q psy949           39 EENTKIIARVQNLAFPP--NVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFC--GNTIAGLSL-------LSDSVMK  107 (569)
Q Consensus        39 pel~~ILdRVrslaF~p--~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~f--GpvIASLSL-------GS~rVM~  107 (569)
                      +....|.+||++.....  .......+.++.|.+||       ...+|.|....-  |..++++-+       |++  +.
T Consensus        59 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~Y~~g~-------~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~--~~  129 (178)
T smart00702       59 LVIERIRQRLADFLGLLRGLPLSAEDAQVARYGPGG-------HYGPHVDNFEDDENGDRIATFLLYLNDVEEGGE--LV  129 (178)
T ss_pred             HHHHHHHHHHHHHHCCCchhhccCcceEEEEECCCC-------cccCcCCCCCCCCCCCeEEEEEEEeccCCcCce--EE
Confidence            34567778888775322  01244667789998877       889999986432  233433332       222  22


Q ss_pred             EEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEec
Q psy949          108 LVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICR  166 (569)
Q Consensus       108 FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR  166 (569)
                      |...+. .....|.-..|+++++...-. ...|++.+.          ..|.|++++.+
T Consensus       130 f~~~~~-~~~~~v~P~~G~~v~f~~~~~-~~~H~v~pv----------~~G~r~~~~~W  176 (178)
T smart00702      130 FPGLGL-MVCATVKPKKGDLLFFPSGRG-RSLHGVCPV----------TRGSRWAITGW  176 (178)
T ss_pred             ecCCCC-ccceEEeCCCCcEEEEeCCCC-CccccCCcc----------eeCCEEEEEEE
Confidence            222211 234578888899999874422 455888875          46889999875

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.

>KOG1331|consensus

Probab=94.38  E-value=0.0062  Score=62.84  Aligned_cols=47  Identities=19%  Similarity=0.203  Sum_probs=40.3

Q ss_pred             ccccccCCcchhhhhcccCCC------CCCcceeeccCCCCCCCCCCcc--ccccCCC
Q psy949          178 SDTSTNNNPYASMFYIFFQPR------LPEPDLIRLDSSDDVLPTSSQC--AGVENPL  227 (569)
Q Consensus       178 ~eas~LE~~YVh~vY~~Iap~------~P~p~~~~~~~~~~~lp~~s~~--a~~~~~~  227 (569)
                      ..+..+|++|||.+|+.||+|      .|||++-.|+.   .+|+||+.  +|--|+-
T Consensus         4 ~~~~eleqeyVh~IYd~ia~~fs~tr~~~Wp~v~qfl~---~~~~gsv~~d~gCGngk   58 (293)
T KOG1331|consen    4 AQLTELEQEYVHSIYDKIATHFSATRAAPWPMVRQFLD---SQPTGSVGLDVGCGNGK   58 (293)
T ss_pred             hhHHHHHHHHhHHHHHHhhhhccccccCccHHHHHHHh---ccCCcceeeecccCCcc
Confidence            456789999999999999998      89999999999   99999975  4555554

>KOG2731|consensus

Probab=92.98  E-value=0.11  Score=55.35  Aligned_cols=126  Identities=13%  Similarity=0.069  Sum_probs=80.5

Q ss_pred             hhccccccc--cCCchhhhcc---ccccccCCCChhHHH-HHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcc
Q psy949           10 SYQDKLLYE--YDHWDDAIHG---FRETERSKWNEENTK-IIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIK   82 (569)
Q Consensus        10 ~~LkRlRYe--~gHWDsaI~G---YRE~E~spWppel~~-ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIg   82 (569)
                      +.++++|+.  .-|+|-.-.+   |-+.....-.+.+.. .-+++.... |.. ....+- +|.+|+.-+      +.++
T Consensus       160 r~~~KlRw~T~G~~~dw~s~~~~~~~s~k~~~~~~~ll~~~~~~~~~a~~~~~-~~~~~G-li~nYlsi~------~tl~  231 (378)
T KOG2731|consen  160 RLLPKLRWVTLGNQYDWSSKDIFIFLSKKHYNIKPSLLGLLREKVKAAKGFSH-IVIRPG-LIKNYLSID------DTLG  231 (378)
T ss_pred             hhhhhhcccccccccCCccccccccccccCCCCChHHhhhhhhhhhhhcCccc-eeccCc-ceeeecccC------cEEE
Confidence            456778887  3445544444   123333333333333 333333332 221 111122 355555433      4899


Q ss_pred             cCCCCCC-CCCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccceecccc
Q psy949           83 AHVDSVR-FCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLE  144 (569)
Q Consensus        83 PHVDs~~-~fGpvIASLSLGS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~  144 (569)
                      .|.|... .++..+.+.|||.++.+.+....-.+....++|--|..+||.|.+|..+ |+|+.
T Consensus       232 ih~d~reld~~~pf~s~s~g~~ai~lLg~m~l~e~p~p~~lrsGdv~im~Gfsrlv~-haIp~  293 (378)
T KOG2731|consen  232 IHLDCRELDLSKPFYSPSLGQGAILLLGMMCLGENPDPMTLRSGDVVIMDGFSRLVE-HAIPE  293 (378)
T ss_pred             EEeehhhcccCCccccccccccceeeecccccCCCCCccccccCceEeecchHHHHh-hccch
Confidence            9999764 4566899999999999999887655677889999999999999998876 89983

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional

Probab=91.68  E-value=1.1  Score=44.77  Aligned_cols=83  Identities=22%  Similarity=0.097  Sum_probs=53.8

Q ss_pred             eeeeeecCCccccccCcCCcccCCCCCCCC--C--C---eEE--EEecCC-----CeEEEEEecCCCCeEEEEEecCCcE
Q psy949           62 YVHVLDLEQKGYIKAHKGYIKAHVDSVRFC--G--N---TIA--GLSLLS-----DSVMKLVDEKTKTQEILVLLKQRSL  127 (569)
Q Consensus        62 QVhVNEYypgGY~~ArgDGIgPHVDs~~~f--G--p---vIA--SLSLGS-----~rVM~FR~kk~~g~kVsV~LPpRSL  127 (569)
                      ..+++.|..||       ..++|+|+....  |  .   ...  .|-|..     +..+.|...   .....|.++.|++
T Consensus        81 ~~~f~rY~~G~-------~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~---~g~~~Vkp~aG~~  150 (226)
T PRK05467         81 PPLFNRYEGGM-------SYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDT---YGEHRVKLPAGDL  150 (226)
T ss_pred             cceEEEECCCC-------ccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecC---CCcEEEecCCCeE
Confidence            46689988877       899999986432  1  1   111  112221     122333322   2346899999999


Q ss_pred             EeecccccccceeccccccccCCCCccccCCCeEEEEeccC
Q psy949          128 YVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNT  168 (569)
Q Consensus       128 LIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V  168 (569)
                      ++....    -.|++.+.          .+|.|++++++--
T Consensus       151 vlfps~----~lH~v~pV----------t~G~R~~~~~Wi~  177 (226)
T PRK05467        151 VLYPST----SLHRVTPV----------TRGVRVASFFWIQ  177 (226)
T ss_pred             EEECCC----Cceeeeec----------cCccEEEEEecHH
Confidence            999864    55888874          5899999998753

>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function

Probab=91.32  E-value=1  Score=44.11  Aligned_cols=105  Identities=16%  Similarity=0.197  Sum_probs=73.8

Q ss_pred             CCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCCC------eEEEEe------cCC
Q psy949           35 SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGN------TIAGLS------LLS  102 (569)
Q Consensus        35 spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGp------vIASLS------LGS  102 (569)
                      ..|++.+.++++++.+..-..     ...+++.|.+||       ...-|.|.   +|+      +|+.||      -|+
T Consensus        41 ~~yP~~~~~fl~~ch~aGQ~r-----ptplllrY~~gd-------yn~LHqdl---yGe~vFPlQvv~lLs~Pg~DftGG  105 (173)
T PF09859_consen   41 ARYPATLAEFLARCHAAGQTR-----PTPLLLRYGPGD-------YNCLHQDL---YGEHVFPLQVVILLSEPGEDFTGG  105 (173)
T ss_pred             CCCCccHHHHHHHHHhccCCC-----CchhhheeCCCC-------ccccccCC---CCCcccCeEEEEEcCCCCCcccCc
Confidence            478899999999999776322     224478888877       77788884   465      566666      366


Q ss_pred             CeEEEEEecCCCCeEEEEEecCCcEEeec----------ccccccceeccccccccCCCCccccCCCeEEEE
Q psy949          103 DSVMKLVDEKTKTQEILVLLKQRSLYVMK----------DDARYKFTHEVLENERSYFGDLFVPRGRRISVI  164 (569)
Q Consensus       103 ~rVM~FR~kk~~g~kVsV~LPpRSLLIMS----------GEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLT  164 (569)
                      +=||.=-.........-|.|..|..+|+.          |.-|-.-+|||...          ..|+|..|.
T Consensus       106 EFVltEQrPR~QSR~~V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~v----------rsG~R~tLg  167 (173)
T PF09859_consen  106 EFVLTEQRPRMQSRAMVLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRV----------RSGERHTLG  167 (173)
T ss_pred             eEEEEEecCCccCccccCCcCCCCEEEEecCCCCcCCCccceecccccccccc----------cccceEEEE
Confidence            66665444434456677889999999985          55666778888764          578887664

>PF12933 FTO_NTD: FTO catalytic domain; InterPro: IPR024367 Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family

Probab=85.53  E-value=2.1  Score=44.11  Aligned_cols=99  Identities=21%  Similarity=0.168  Sum_probs=51.0

Q ss_pred             CCcceeeeeecCC----------ccccccCcCCcccCCCCCCCCCCeEEEEecCCCe------EEEEEecCCCCeEEEEE
Q psy949           58 TPIQYVHVLDLEQ----------KGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDS------VMKLVDEKTKTQEILVL  121 (569)
Q Consensus        58 pl~NQVhVNEYyp----------gGY~~ArgDGIgPHVDs~~~fGpvIASLSLGS~r------VM~FR~kk~~g~kVsV~  121 (569)
                      +.+|-.+||-+.|          ..|-+.-+-.++||.|.--.=..+||.-|--.+.      -.-|+.-+.....+.|.
T Consensus       136 ~~fNvTLlN~MdP~~~~~~~LK~Ep~fgmGKmaVsWH~DenL~~~StVAVY~~s~~~~~~~~W~VgLka~D~~tP~L~vP  215 (253)
T PF12933_consen  136 CEFNVTLLNYMDPSSQAMPDLKEEPYFGMGKMAVSWHHDENLVERSTVAVYSYSCEEPEPADWHVGLKAWDIETPGLAVP  215 (253)
T ss_dssp             ----EEEEEEE-S--S-SSS--B-SSS---BEEEEEE---SB-TT--EEEEEEE-----TTSEEEEEETT--SS-EEEEE
T ss_pred             eeeehhhhhccCcccccccccccccccCCcceeeeeccccccccccceEEEEecCCCCCCCceEEEEeecCCCCCeeEEe
Confidence            3466555665555          1133333457899999654333477766643321      22244333446789999


Q ss_pred             ecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEecc
Q psy949          122 LKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN  167 (569)
Q Consensus       122 LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~  167 (569)
                      |+.|++|.|-++-..+.+|++....           ..|+|=|-|-
T Consensus       216 L~sgd~Y~Mldd~N~tHqH~VlaG~-----------~~RfSSTHRV  250 (253)
T PF12933_consen  216 LRSGDCYYMLDDFNATHQHCVLAGS-----------SARFSSTHRV  250 (253)
T ss_dssp             E-TT-EEEE-TTHHHHEEEEEE--S-----------S-EEEEEEE-
T ss_pred             ccCCCeEEEccccchhhHHHHhcCC-----------Ccccccccee
Confidence            9999999999999999999999753           4599998874

This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine []. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well []. This domain is the catalytic AlkB-like domain from the FTO protein []. This domain catalyses a demethylase activity with a preference for 3-methylthymidine.; PDB: 3LFM_A.

>KOG4176|consensus

Probab=85.04  E-value=0.67  Score=48.70  Aligned_cols=185  Identities=21%  Similarity=0.196  Sum_probs=138.3

Q ss_pred             chhhhhhhhccccccccCCchhhhccccccccCCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcc
Q psy949            3 NSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIK   82 (569)
Q Consensus         3 ~L~~eie~~LkRlRYe~gHWDsaI~GYRE~E~spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIg   82 (569)
                      ++.+++....+|++|+++||+.+|++|++.+...|...+.....+++...|.++....-..+|.|+...|       .++
T Consensus        75 ~~~~~~~~e~~~~~~~~~~~~~~i~~f~~~e~~~~~~~n~~~~~~l~~~~~~~~e~~~~~d~V~el~e~~-------l~~  147 (323)
T KOG4176|consen   75 SLFRELYSEESRLRYRTDANLKAIKGFGEQEQLKGQSVNVVEGLKLRDEVFIPGELSLIVDFVTELEEKG-------LIG  147 (323)
T ss_pred             chhhhhchhhhhhhhhhhccccccccccceeeccchhhhhhhhheeeccccChhhceehhhhhhhhHHhh-------hhc
Confidence            4567788899999999999999999999999999998877778888878777653333445577777777       788


Q ss_pred             cCCCCCCCC---CCeEEEEecCCCeEEEEEecCCC-------------------------------------------Ce
Q psy949           83 AHVDSVRFC---GNTIAGLSLLSDSVMKLVDEKTK-------------------------------------------TQ  116 (569)
Q Consensus        83 PHVDs~~~f---GpvIASLSLGS~rVM~FR~kk~~-------------------------------------------g~  116 (569)
                      .|.|.....   |.....+.||.+..+.-...++.                                           ..
T Consensus       148 ~~~~e~~~~~~~gk~R~~iq~G~~f~y~~~~~d~~~~~~piPs~~~~ii~rlv~~~~ip~~pd~~~iN~Ye~G~~i~ph~  227 (323)
T KOG4176|consen  148 ALVDETFTYQESGKHREVIQLGYPFDYRTNNVDESKPVDPIPSLFKSIIDRLVSWRVIPERPDQCTINFYEPGDGIPPHI  227 (323)
T ss_pred             ccccccceeeccccceeeeecCceeccCCCcccccCccCCCchHHHHHHHHhhhhccCCCCCCeeEEEeeCCCCCCCCCC
Confidence            999988777   88889999988766665433210                                           12


Q ss_pred             EEEEEecCCcEEeecccccccceeccccccccCCCC-ccccCCCeEEEEeccCCCCCCCCCcccccccCCcchhhhhccc
Q psy949          117 EILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGD-LFVPRGRRISVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFF  195 (569)
Q Consensus       117 kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG-~~v~RgrRISLTFR~V~p~~lp~~~~eas~LE~~YVh~vY~~I  195 (569)
                      ..+.+|.+.+.|.|.+++.+.+.|++.....-.+.| -......|..|.+|.-.....+.|...   ..+.++.-.+-+|
T Consensus       228 ~~~~F~~Pi~slS~lSe~~m~Fg~~~~~~~~~~~~g~~s~p~~~g~~lvi~~~~ad~~~~~~~~---~~~kRisitfrki  304 (323)
T KOG4176|consen  228 DHSAFLDPISSLSFLSECTMEFGHGLLSDNIGNFRGSLSLPLRYGSVLVIRGRSADVAPHCIRP---SRNKRISITFRKI  304 (323)
T ss_pred             ChHHhcCceEEEEeecceeEEecccccccCccccccccccccccCeEEEeCCCcccccccccCC---CCCceEEEEEEEe
Confidence            577899999999999999999999999876555555 445677788888888776666666554   3344444334444


Q ss_pred             CC
Q psy949          196 QP  197 (569)
Q Consensus       196 ap  197 (569)
                      -+
T Consensus       305 ~~  306 (323)
T KOG4176|consen  305 RP  306 (323)
T ss_pred             cc
Confidence            33

>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []

Probab=81.76  E-value=5.7  Score=37.81  Aligned_cols=78  Identities=14%  Similarity=0.104  Sum_probs=49.1

Q ss_pred             CcccCCCCCCCCCCeEEEEecCC----CeEEEEEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccc
Q psy949           80 YIKAHVDSVRFCGNTIAGLSLLS----DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFV  155 (569)
Q Consensus        80 GIgPHVDs~~~fGpvIASLSLGS----~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v  155 (569)
                      ....|.|.+..-...-+.+.||.    +..+.+-..+..-.-+.|.+.+|+++++.|-   ...||+.+.+.     -..
T Consensus        86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~---~~~Hgvtpv~~-----~~~  157 (171)
T PF12851_consen   86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAK---RELHGVTPVES-----PNR  157 (171)
T ss_pred             CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEccc---ceeeecCcccC-----CCC
Confidence            56799998764232333333333    3334433211112568999999999999886   57899998641     112


Q ss_pred             cCCCeEEEEe
Q psy949          156 PRGRRISVIC  165 (569)
Q Consensus       156 ~RgrRISLTF  165 (569)
                      ..+.||||.|
T Consensus       158 ~~~~R~slvf  167 (171)
T PF12851_consen  158 NHGTRISLVF  167 (171)
T ss_pred             CCCeEEEEEE
Confidence            3589999987

Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	569
3tht_A	345	Alkylated DNA repair protein ALKB homolog 8; struc	6e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3i3q_A	211	Alpha-ketoglutarate-dependent dioxygenase ALKB; be	7e-05

>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Length = 345

 Score = 78.3 bits (192), Expect = 6e-16
 Identities = 34/175 (19%), Positives = 50/175 (28%), Gaps = 26/175 (14%)

Query: 37  WNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIA 96
            +     I                +   +   +   Y       I AH+D+     + I 
Sbjct: 172 LSGGLPDICESFLEKWLRKGYIKHKPDQMTINQ---YEPGQG--IPAHIDTHSAFEDEIV 226

Query: 97  GLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENER--------- 147
            LSL S+ VM             V+L +RSL VM  ++RY +TH +   +          
Sbjct: 227 SLSLGSEIVMDFKHPDGIAVP--VMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESL 284

Query: 148 -------SYFGDLFVPRGRRISVICRN---TPDPSLIDSSSDTSTNNNPYASMFY 192
                           RG R S   R    TP         D+    N Y     
Sbjct: 285 KSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKENLYFQGLE 339

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.7 bits (141), Expect = 4e-09
 Identities = 62/392 (15%), Positives = 117/392 (29%), Gaps = 117/392 (29%)

Query: 27  HGFRETERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVD 86
           H   + E  +   +   I++  ++ AF   V       V D+  K  +       K  +D
Sbjct: 4   HHHMDFETGEHQYQYKDILSVFED-AF---VDNFDCKDVQDMP-KSILS------KEEID 52

Query: 87  SVRFCGNTIAGLSLL--------SDSVMKLVDEKTKT------QEILVLLKQRSLYVMKD 132
            +    + ++G   L         + V K V+E  +         I    +Q S+     
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM----M 108

Query: 133 DARYKFTHEVLENERSYFGDLFVPRGRRISVICRN-----TPDPSLI------------- 174
              Y    + L N+   F    V R +    + R       P  +++             
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL-RQALLELRPAKNVLIDGVLGSGKTWVA 167

Query: 175 -DSSSDTSTNNNPYASMFYIFFQPRLPEPDLIRLDSSDDVLPTSSQCAGVENPLYPYFVP 233
            D              +F++         +L   +S + VL            L      
Sbjct: 168 LDVCLSYKVQCKMDFKIFWL---------NLKNCNSPETVL----------EML------ 202

Query: 234 KNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLKSPPSRPS---------SN 284
           + L  Q +    +   +SS+   + +     ++       LKS P             + 
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIH-----SIQAELRRLLKSKPYENCLLVLLNVQNAK 257

Query: 285 YHKAFSFHGK----SQDTSNSFDFLTSSST-HPT---HTNGFTTSSISSTFPSEPLPSSQ 336
              AF+   K    ++      DFL++++T H +   H+   T        P E      
Sbjct: 258 AWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLT--------PDEVK---- 304

Query: 337 PKVLSTFMNHSQPPPLSPRKLNNTESKQNLPL 368
             +L  +++   P  L PR     E     P 
Sbjct: 305 -SLLLKYLDCR-PQDL-PR-----EVLTTNPR 328

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 70/500 (14%), Positives = 137/500 (27%), Gaps = 156/500 (31%)

Query: 110 DEKTKTQEILVLLKQRSLYVMKD-DARY--KFTHEVLENERSYFGDLF-----VPRGRRI 161
           + + + ++IL + +      + + D +        +L  E      +      V    R+
Sbjct: 13  EHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSKEE--IDHIIMSKDAVSGTLRL 67

Query: 162 SVICRNTPDPSLIDSSSDTSTNNNPYASMFYIFF------QPRLPEPDLIRLDSSDDVLP 215
                +  +  ++    +     N      Y F       + R P           D L 
Sbjct: 68  FWTLLSKQE-EMVQKFVEEVLRIN------YKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 216 TSSQCAGVENPLYPYFVPKNLQPQPEKQEEASGSNSSSNSFKQNMDFFSNLSNSSSSQLK 275
             +Q          Y V +    QP  +             +Q +            +L 
Sbjct: 121 NDNQ------VFAKYNVSR---LQPYLK------------LRQAL-----------LEL- 147

Query: 276 SPPSRPSSNYHKAFSFHG-----KS---QDTSNSFDFLTSSSTHPTHTNGFTTSSISSTF 327
               RP+ N        G     K+    D   S+               F    +    
Sbjct: 148 ----RPAKN----VLIDGVLGSGKTWVALDVCLSYKVQC--------KMDFKIFWL--NL 189

Query: 328 PSEPLPSSQPKVLSTFMNHSQPPPLSPRKLNNTESKQNLPLN-NLPVNAPRLPLVPTVGP 386
            +   P +  ++L   +       + P   + ++   N+ L  +      R  L      
Sbjct: 190 KNCNSPETVLEMLQKLLYQ-----IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 387 PSYLSYPKPPVLNNGFSHPVQVSRPPSYLSYPKPPVLNNGFSHPVQV---SSNSSSSEFN 443
              L      VL N     VQ ++             N  F+   ++   +     ++F 
Sbjct: 245 NCLL------VLLN-----VQNAK-----------AWN-AFNLSCKILLTTRFKQVTDF- 280

Query: 444 SEAKDFFDSILNNNSTTYPSVAQRNGVFASKPSTSTYASRAAFLN---EQLGPAVPSIAP 500
                     L+  +TT+ S+   +         S       +L+   + L   V +  P
Sbjct: 281 ----------LSAATTTHISLDHHSMTLTPDEVKSLLLK---YLDCRPQDLPREVLTTNP 327

Query: 501 KK-SVICTS-RRHKIFW--WKSNKSPCAKFVLHVRSFMRS-SQKYIRAAFLNEQLGPAVP 555
           ++ S+I  S R     W  WK     C K    + S +        R  F  ++L     
Sbjct: 328 RRLSIIAESIRDGLATWDNWK--HVNCDKLTTIIESSLNVLEPAEYRKMF--DRL----- 378

Query: 556 SIAPKNV-------CRIYWN 568
           S+ P +          + W 
Sbjct: 379 SVFPPSAHIPTILLS-LIWF 397

>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Length = 211

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 81  IKAHVDSVRFC-GNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFT 139
           +  H D         I  +SL   ++ +    K       +LL+   + V   ++R  + 
Sbjct: 118 LSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFY- 176

Query: 140 HEVLENERSYFGDLFVPRGRRIS 162
           H +        G   +    R +
Sbjct: 177 HGIQ---PLKAGFHPLTIDCRYN 196

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	569
3tht_A	345	Alkylated DNA repair protein ALKB homolog 8; struc	99.94
2iuw_A	238	Alkylated repair protein ALKB homolog 3; oxidoredu	99.92
3i3q_A	211	Alpha-ketoglutarate-dependent dioxygenase ALKB; be	99.91
3s57_A	204	Alpha-ketoglutarate-dependent dioxygenase ALKB HO;	99.91
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	94.03
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	93.31
2rg4_A	216	Uncharacterized protein; rhodobacterales, oceanico	89.53
3dkq_A	243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	80.92

>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*

Probab=99.94  E-value=1.1e-26  Score=233.46  Aligned_cols=130  Identities=22%  Similarity=0.262  Sum_probs=113.7

Q ss_pred             CCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEecCCCeEEEEEecCCC
Q psy949           35 SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTK  114 (569)
Q Consensus        35 spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSLGS~rVM~FR~kk~~  114 (569)
                      .+|++.+..|++|+.+..+.+  ..+|+++||+|.+|+       +|+||+|++..||++|++||||++++|.|++.+  
T Consensus       174 ~~~P~~L~~l~~r~~~~~~~~--~~~n~~lvN~Y~~G~-------~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~--  242 (345)
T 3tht_A          174 GGLPDICESFLEKWLRKGYIK--HKPDQMTINQYEPGQ-------GIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPD--  242 (345)
T ss_dssp             -CCCHHHHHHHHHHHHHTSCS--SCCSEEEEEEECTTC-------CEEEECCCTTTBCSCEEEEEESSCEEEEEECTT--
T ss_pred             cCcCHHHHHHHHHHHhcccCC--CCCCEEEEEEecCCC-------CEeeccCCchhcCCeEEEEECCCceeEEEccCC--
Confidence            569999999999998655443  367999999988866       999999999999999999999999999999975  


Q ss_pred             CeEEEEEecCCcEEeecccccccceeccccccccCCCC----------------ccccCCCeEEEEeccCCCCCCCCC
Q psy949          115 TQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGD----------------LFVPRGRRISVICRNTPDPSLIDS  176 (569)
Q Consensus       115 g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG----------------~~v~RgrRISLTFR~V~p~~lp~~  176 (569)
                      +..++|.|++||||||.|++|+.|+|+|++++.|++++                +++.|++|||||||+|+... |+|
T Consensus       243 ~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~-c~C  319 (345)
T 3tht_A          243 GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTP-CNC  319 (345)
T ss_dssp             SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSC-CCC
T ss_pred             CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCC-cCC
Confidence            56899999999999999999999999999999988643                36789999999999999775 555

>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10

Probab=99.92  E-value=6.7e-25  Score=208.79  Aligned_cols=119  Identities=15%  Similarity=0.233  Sum_probs=102.3

Q ss_pred             CCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCC--CeEEEEecCCCeEEEEEecC
Q psy949           35 SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCG--NTIAGLSLLSDSVMKLVDEK  112 (569)
Q Consensus        35 spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fG--pvIASLSLGS~rVM~FR~kk  112 (569)
                      .+|++.+..|++++++.. .   ..+|+|+||.|.+|      .|+|+||.|++..+|  +.||+||||++|+|.|++..
T Consensus       104 p~wp~~l~~l~~~~~~~~-g---~~~n~~LvN~Y~~G------~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~  173 (238)
T 2iuw_A          104 PHWHPVLRTLKNRIEENT-G---HTFNSLLCNLYRNE------KDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKP  173 (238)
T ss_dssp             SSCCHHHHHHHHHHHHHH-S---CCCCEEEEEEECST------TCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHHh-C---CCCCEEEEEEECCC------CCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccC
Confidence            489999999999998763 1   25689988887664      369999999999998  79999999999999999975


Q ss_pred             CC--------CeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccCCCC
Q psy949          113 TK--------TQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPDP  171 (569)
Q Consensus       113 ~~--------g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V~p~  171 (569)
                      ..        ...++|.|++||||||.|++|+.|+|+|++++        ..+++|||||||.+.+.
T Consensus       174 ~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~--------~~~~~RIsLTfR~v~~~  232 (238)
T 2iuw_A          174 PPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEY--------HSREPRVNLTFRTVYPD  232 (238)
T ss_dssp             C--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCS--------SCCCCEEEEEEECCCC-
T ss_pred             CccccCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcC--------CCCCCEEEEEeeecccc
Confidence            31        36899999999999999999999999999875        36899999999999854

>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...

Probab=99.91  E-value=1.5e-24  Score=204.99  Aligned_cols=138  Identities=14%  Similarity=0.204  Sum_probs=112.5

Q ss_pred             Cchhhhcccccccc-----CCCCh---hHHHHHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcccCCC-CCCC
Q psy949           21 HWDDAIHGFRETER-----SKWNE---ENTKIIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVD-SVRF   90 (569)
Q Consensus        21 HWDsaI~GYRE~E~-----spWpp---el~~ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVD-s~~~   90 (569)
                      +|..+-.+||....     .+|++   .+..+++|+.... +..  ..+|+|+||.|.+|+       +|+||+| ++..
T Consensus        58 ~W~~d~~~Y~Ys~~~~~~~~pw~~~P~~L~~l~~~~~~~~g~~~--~~pn~~LvN~Y~~G~-------~i~~H~D~~e~~  128 (211)
T 3i3q_A           58 GWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPD--FQPDACLINRYAPGA-------KLSLHQDKDEPD  128 (211)
T ss_dssp             EEEEETTEEEEESBCTTTSSBCCCCCHHHHHHHHHHHHHTTCTT--CCCCEEEEEEECTTC-------CEEEECCCCCSC
T ss_pred             eeecCCCCcCcCCCccCCCCCCCchHHHHHHHHHHHHHhcCCCC--cCCCEEEEEEEcCCC-------CcccccCCCccc
Confidence            68766668876533     57887   8999999988654 322  245899999987765       9999999 5667


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccCCC
Q psy949           91 CGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPD  170 (569)
Q Consensus        91 fGpvIASLSLGS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V~p  170 (569)
                      ||+.|++||||++|+|.|++....+..++|.|++||||||.|++|+ |+|+|++++.+...   ..++.|||||||.+.+
T Consensus       129 ~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p---~~~~~RIsLTFR~~~~  204 (211)
T 3i3q_A          129 LRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHP---LTIDCRYNLTFRQAGK  204 (211)
T ss_dssp             TTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBT---TTBTCEEEEEEECCSC
T ss_pred             cCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCC---CCCCCEEEEEeeeccC
Confidence            8999999999999999999875556789999999999999999998 99999998754422   3578999999999985


Q ss_pred             C
Q psy949          171 P  171 (569)
Q Consensus       171 ~  171 (569)
                      .
T Consensus       205 ~  205 (211)
T 3i3q_A          205 K  205 (211)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*

Probab=99.91  E-value=2.3e-24  Score=201.29  Aligned_cols=119  Identities=16%  Similarity=0.212  Sum_probs=100.7

Q ss_pred             ccCCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCC--CCCeEEEEecCCCeEEEEEe
Q psy949           33 ERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRF--CGNTIAGLSLLSDSVMKLVD  110 (569)
Q Consensus        33 E~spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~--fGpvIASLSLGS~rVM~FR~  110 (569)
                      ...+|++.+..+++++++.. .   ..+|+|+||.|.+|      .|+|+||.|++..  ++++||+||||++|+|.|++
T Consensus        76 ~~~pwp~~L~~l~~~~~~~~-g---~~~n~~LvN~Y~~G------~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~  145 (204)
T 3s57_A           76 SPKPWIPVLERIRDHVSGVT-G---QTFNFVLINRYKDG------SDHICEHRDDERELAPGSPIASVSFGASRDFVFRH  145 (204)
T ss_dssp             CCEECCHHHHHHHHHHHHHH-C---CCCSEEEEEEESST------TCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHh-C---CCCceeEEEEECCC------CCcccceecChhhccCCCcEEEEECCCceEEEEEE
Confidence            45799999999999998653 1   25688988887664      3699999999875  57899999999999999998


Q ss_pred             cCCC-------CeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccCC
Q psy949          111 EKTK-------TQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTP  169 (569)
Q Consensus       111 kk~~-------g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V~  169 (569)
                      ....       ...++|.|++||||||.|++|+.|+|+|++++        ..++.|||||||.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~--------~~~~~RislTFR~i~  203 (204)
T 3s57_A          146 KDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRK--------KVLAPRVNLTFRKIL  203 (204)
T ss_dssp             GGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCT--------TCCSCEEEEEEECBC
T ss_pred             cCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccC--------CCCCCEEEEEeeeec
Confidence            6422       25799999999999999999999999999986        257999999999874

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}

Probab=94.03  E-value=0.1  Score=49.58  Aligned_cols=137  Identities=15%  Similarity=0.113  Sum_probs=81.3

Q ss_pred             chhhhhhhhccccccccCCchhhhccccccccCCC--ChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCC
Q psy949            3 NSVRHQSSYQDKLLYEYDHWDDAIHGFRETERSKW--NEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGY   80 (569)
Q Consensus         3 ~L~~eie~~LkRlRYe~gHWDsaI~GYRE~E~spW--ppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDG   80 (569)
                      .|++..++.|+|-.-.   .|.....+|-....-+  .+....|.+||.+....+- .....+.++.|.+||       .
T Consensus        55 ~Li~~a~~~l~~s~v~---~~~~~~~~RtS~~~wl~~~~~v~~i~~Ri~~~~gl~~-~~~E~lqv~~Y~~G~-------~  123 (216)
T 3itq_A           55 ELIELSKSKLARSKVG---SSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMNVPA-SHGEGLHILNYEVDQ-------Q  123 (216)
T ss_dssp             HHHHHHHHHHC-----------CCCCGGGTTCEECCCCHHHHHHHHHHHHHHTSCG-GGBCCCEEEEECBTC-------C
T ss_pred             HHHHHhhcccccceec---cCCccCCcEeeeeEEeCCcHHHHHHHHHHHHhcCcee-ccccceeEEEeCCCC-------c
Confidence            4666667767664431   1244556666553211  4557778888877652220 122457789999988       7


Q ss_pred             cccCCCCCCC-----CCCeEEEEec-------CCCeEEEEEecCCCCeEEEEEecCCcEEeecc-----cccccceeccc
Q psy949           81 IKAHVDSVRF-----CGNTIAGLSL-------LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKD-----DARYKFTHEVL  143 (569)
Q Consensus        81 IgPHVDs~~~-----fGpvIASLSL-------GS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSG-----EARY~WtHGIp  143 (569)
                      -.+|.|....     .|..++++-+       |++.+|  -     ...+.|....|++++.-.     +......|+..
T Consensus       124 y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F--p-----~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~  196 (216)
T 3itq_A          124 YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF--P-----KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGA  196 (216)
T ss_dssp             EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE--T-----TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEEC
T ss_pred             cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe--c-----CCCCEEecCCCeEEEEeccCCCCCCCCccccccc
Confidence            8899997542     3556666542       343333  1     123678888999999864     33345678888


Q ss_pred             cccccCCCCccccCCCeEEEEecc
Q psy949          144 ENERSYFGDLFVPRGRRISVICRN  167 (569)
Q Consensus       144 ~Rk~D~~dG~~v~RgrRISLTFR~  167 (569)
                      +.          .+|.|.++|..-
T Consensus       197 PV----------~~G~K~v~~~W~  210 (216)
T 3itq_A          197 PV----------TKGEKWIATQWV  210 (216)
T ss_dssp             CE----------EESCEEEEEEEE
T ss_pred             ee----------ccccEEEEEeeE
Confidence            75          478898888653

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A

Probab=93.31  E-value=0.25  Score=45.64  Aligned_cols=110  Identities=14%  Similarity=0.122  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCC--------CCCeEEEEec-------CCC
Q psy949           39 EENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRF--------CGNTIAGLSL-------LSD  103 (569)
Q Consensus        39 pel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~--------fGpvIASLSL-------GS~  103 (569)
                      +....|.+||.+....+. .....+.++.|.+||       .-.+|.|....        -|..++++-|       |++
T Consensus        77 ~~~~~i~~ri~~~~gl~~-~~~e~~qv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGe  148 (224)
T 2jig_A           77 SVISKIEKRVAQVTMIPL-ENHEGLQVLHYHDGQ-------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGE  148 (224)
T ss_dssp             HHHHHHHHHHHHHHTCCG-GGBCCCEEEEEETTC-------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECC
T ss_pred             HHHHHHHHHHHHHhCCCc-ccccceEEEecCCCc-------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCc
Confidence            456778888877653221 123457789999887       78899996421        2456666552       444


Q ss_pred             eEEEEEecCC----------CCeEEEEEecCCcEEeec-----ccccccceeccccccccCCCCccccCCCeEEEEeccC
Q psy949          104 SVMKLVDEKT----------KTQEILVLLKQRSLYVMK-----DDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNT  168 (569)
Q Consensus       104 rVM~FR~kk~----------~g~kVsV~LPpRSLLIMS-----GEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V  168 (569)
                      .+|-  ....          ....+.|....|++++.-     |+.-..-.|+..+.          .+|.|+++|..--
T Consensus       149 T~Fp--~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV----------~~G~K~~~~~Wi~  216 (224)
T 2jig_A          149 TVLP--NAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPT----------LKGDKWSATKWIH  216 (224)
T ss_dssp             EEET--TSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCE----------EESEEEEEEEEEE
T ss_pred             eeCC--CcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCcc----------ccceEEEEEEeEE
Confidence            4441  1100          012588999999999984     45556778888874          4788988887643

>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A

Probab=89.53  E-value=1.7  Score=40.74  Aligned_cols=88  Identities=19%  Similarity=0.168  Sum_probs=59.3

Q ss_pred             cceeeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEecC-CCeEEEEEecCC------------C----CeEEEEEe
Q psy949           60 IQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKT------------K----TQEILVLL  122 (569)
Q Consensus        60 ~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSLG-S~rVM~FR~kk~------------~----g~kVsV~L  122 (569)
                      +..+.++-|.+||       ....|+|....+. .|.-|... ....+.|.....            .    ...+.|.-
T Consensus       102 i~~~W~~~~~~G~-------~~~~H~H~~~~lS-gV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P  173 (216)
T 2rg4_A          102 LEDIWINILPEGG-------VHGSHIHPHSVIS-GTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAP  173 (216)
T ss_dssp             EEEEEEEEECTTC-------CEEEECCTTCSEE-EEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECC
T ss_pred             EeeEEEEEcCCCC-------cccCccCCCCeEE-EEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecC
Confidence            3457788888877       7889999644332 56666664 234677765421            0    23346777


Q ss_pred             cCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccC
Q psy949          123 KQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNT  168 (569)
Q Consensus       123 PpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V  168 (569)
                      ..|.|+|+-..    ..|++.+..         ..+.||||+|=-+
T Consensus       174 ~~G~lvlFpS~----l~H~V~p~~---------~~~~RiSIsFN~~  206 (216)
T 2rg4_A          174 KVGDVLLWESW----LRHEVPMNM---------AEEDRISVSFNYA  206 (216)
T ss_dssp             CTTEEEEEETT----SCEEECCCC---------SSSCEEEEEEEEE
T ss_pred             CCCeEEEECCC----CEEeccCCC---------CCCCEEEEEEEee
Confidence            78999999543    679999865         4678999999443

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}

Probab=80.92  E-value=2.1  Score=41.47  Aligned_cols=105  Identities=11%  Similarity=0.019  Sum_probs=62.9

Q ss_pred             hhHHHHHHHHHhcCCCC-C------CCCcceeeeeecCCccccccCcCCcccCCCCCCCC--C---CeEEEE--ecCC--
Q psy949           39 EENTKIIARVQNLAFPP-N------VTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFC--G---NTIAGL--SLLS--  102 (569)
Q Consensus        39 pel~~ILdRVrslaF~p-~------spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~f--G---pvIASL--SLGS--  102 (569)
                      +....+.+||++..-.. .      .......+++.|.+||       ...+|+|....-  |   ..++++  =|..  
T Consensus        70 ~~~~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~-------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~  142 (243)
T 3dkq_A           70 PVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE-------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPE  142 (243)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC-------EEEEECBCSEEEETTEEEECCEEEEEECSCGG
T ss_pred             HHHHHHHHHHHHHHccCcchhhcccccccccceEEEECCCC-------eeccCCCCCCCCCCCccccceEEEEEEeCCCC
Confidence            34567777777553110 0      0012237789999887       788999975321  1   111221  1211  


Q ss_pred             ---CeEEEEEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEecc
Q psy949          103 ---DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN  167 (569)
Q Consensus       103 ---~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~  167 (569)
                         +..+.|...   .....|..+.|++++....    ..|++.+.          .+|.|.++|+.-
T Consensus       143 ~~~GGetvf~~~---~~~~~V~P~~G~~v~F~s~----~lH~v~pV----------~~G~R~~~~~Wi  193 (243)
T 3dkq_A          143 NYQGGELVIQDT---YGQQSIKLSAGSLVLYPSS----SLHQVTPV----------LSGERTAAFMWL  193 (243)
T ss_dssp             GEEECCEEEEET---TEEEEECCCTTCEEEEETT----SEEEECCE----------EEECEEEEEEEE
T ss_pred             CCCCceEEEeeC---CCcEEEecCCCEEEEECCC----CeEcCccc----------cccCEEEEEEeh
Confidence               122333332   2356899999999999763    57998885          589999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	569
d2fdia1	200	b.82.2.10 (A:15-214) Alkylated DNA repair protein	8e-08
d2iuwa1	210	b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo s	1e-04

>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Length = 200

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: Alkylated DNA repair protein AlkB
species: Escherichia coli [TaxId: 562]

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 19/156 (12%), Positives = 40/156 (25%), Gaps = 19/156 (12%)

Query: 21  HWDDAIHGFRETER--------SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKG 72
            W     G+  +              +    +  R    A  P+  P     +       
Sbjct: 54  GWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQP-DACLINRYAPGA 112

Query: 73  YIKAHKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKD 132
            +  H                 I  +SL   ++ +    K       +LL+   + V   
Sbjct: 113 KLSLH------QDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGG 166

Query: 133 DARYKFTHEVLENERSYFGDLFVPRGRRISVICRNT 168
           ++R  + H +        G   +    R ++  R  
Sbjct: 167 ESRLFY-HGIQ---PLKAGFHPLTIDCRYNLTFRQA 198

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: AlkB homolog 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 18/98 (18%)

Query: 80  YIKAHVD--SVRFCGNTIAGLSLLSDSVM--------KLVDEKTKTQEILVLLKQRSLYV 129
            +  H D          IA LS  +            +   + T  + + + L   +L +
Sbjct: 118 SVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 177

Query: 130 MKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRN 167
           M+   +  + H V +            R  R+++  R 
Sbjct: 178 MEGATQADWQHRVPKEYH--------SREPRVNLTFRT 207

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	569
d2iuwa1	210	AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]	99.94
d2fdia1	200	Alkylated DNA repair protein AlkB {Escherichia col	99.91
d1w9ya1	307	1-aminocyclopropane-1-carboxylate oxidase 1 {Petun	80.66

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: AlkB homolog 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-27  Score=211.98  Aligned_cols=120  Identities=14%  Similarity=0.204  Sum_probs=100.5

Q ss_pred             ccCCCChhHHHHHHHHHhcCCCCCCCCcceeeeeecCCccccccCcCCcccCCCCCCCCC--CeEEEEecCCCeEEEEEe
Q psy949           33 ERSKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVDSVRFCG--NTIAGLSLLSDSVMKLVD  110 (569)
Q Consensus        33 E~spWppel~~ILdRVrslaF~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVDs~~~fG--pvIASLSLGS~rVM~FR~  110 (569)
                      ....|++.+..+.+++.+....    .++.+++|+|+.+|      ++|+||+|++..+|  ++||+||||++|+|.|++
T Consensus        81 ~~~~~~~~l~~l~~~~~~~~~~----~~~~~~ln~Y~~~~------~~I~~H~D~~~~~~~~~~I~slSlG~~~~~~~r~  150 (210)
T d2iuwa1          81 PNPHWHPVLRTLKNRIEENTGH----TFNSLLCNLYRNEK------DSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRK  150 (210)
T ss_dssp             CBSSCCHHHHHHHHHHHHHHSC----CCCEEEEEEECSTT------CCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEE
T ss_pred             cCCCCcHHHHHHHHhhhhhcCc----cchhhhhhccccCC------CccccCcCCchhcccCCceeEEeeCCceEEEEcc
Confidence            4477999999999999877421    34677777776654      69999999998885  479999999999999998


Q ss_pred             cCC--------CCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccCCC
Q psy949          111 EKT--------KTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTPD  170 (569)
Q Consensus       111 kk~--------~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V~p  170 (569)
                      +..        ....++|.|++||||||.|++|++|+|+|++++        ..+++|||||||+|.+
T Consensus       151 ~~~~~~~~~~~~~~~~~i~L~~gsl~vm~g~~~~~~~H~Ip~~~--------~~~~~RiSlTfR~v~p  210 (210)
T d2iuwa1         151 KPPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEY--------HSREPRVNLTFRTVYP  210 (210)
T ss_dssp             CCC--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCS--------SCCCCEEEEEEECCCC
T ss_pred             ccccccCCccCCCceEEEEcCCCCEEEeCchhhCceEccCCccC--------CCCCCeEEEEEEeecC
Confidence            642        236799999999999999999999999999876        3578999999999875

>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: Alkylated DNA repair protein AlkB
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.5e-24  Score=200.39  Aligned_cols=136  Identities=15%  Similarity=0.201  Sum_probs=109.0

Q ss_pred             Cchhhhcccccccc-----CCCC---hhHHHHHHHHHhcC-CCCCCCCcceeeeeecCCccccccCcCCcccCCC-CCCC
Q psy949           21 HWDDAIHGFRETER-----SKWN---EENTKIIARVQNLA-FPPNVTPIQYVHVLDLEQKGYIKAHKGYIKAHVD-SVRF   90 (569)
Q Consensus        21 HWDsaI~GYRE~E~-----spWp---pel~~ILdRVrsla-F~p~spl~NQVhVNEYypgGY~~ArgDGIgPHVD-s~~~   90 (569)
                      +|+.+..+||....     .+|+   +.+.+|.+++.... +..  ..+|+|+||+|.+|.       +|++|.| ++..
T Consensus        54 gW~~d~~~Yry~~~~~~~~~~wp~iP~~l~~L~~~~~~~~~~~~--~~pn~~LvN~Y~~G~-------~~~~h~dddE~~  124 (200)
T d2fdia1          54 GWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPD--FQPDACLINRYAPGA-------KLSLHQDKDEPD  124 (200)
T ss_dssp             EEEEETTEEEEESBCTTTSSBCCCCCHHHHHHHHHHHHHHTCTT--CCCSEEEEEEECTTC-------CEEEECCCCSSC
T ss_pred             ccccCCcCcccccccCCCCCCCCCccHHHHHHHHHHHHHcCCCc--cCCCeeEEEEecCCC-------CccccccCCccc
Confidence            49999999987543     3455   46888888887554 333  256999999987755       7877665 5678


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccceeccccccccCCCCccccCCCeEEEEeccCC
Q psy949           91 CGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENERSYFGDLFVPRGRRISVICRNTP  169 (569)
Q Consensus        91 fGpvIASLSLGS~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHGIp~Rk~D~~dG~~v~RgrRISLTFR~V~  169 (569)
                      ||+.|++||||++|+|.|+.....+..++|.|++||||||+|++|+ |.|+|++++.+.   ....++.|||||||+.-
T Consensus       125 ~~~pIvslSLG~~~~f~f~~~~~~~~~~~~~L~~Gdllvm~G~~r~-~~H~V~~~~~~~---~~~~~~~RislTfR~~g  199 (200)
T d2fdia1         125 LRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGF---HPLTIDCRYNLTFRQAG  199 (200)
T ss_dssp             TTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGGG-CCEEECCCCCCC---BTTTBTCEEEEEEECCC
T ss_pred             cCCCceEEEEeCCeeEEecccccCCceEEEEcCCCCEEEeCcchhh-eEecCCcccCCC---CCCCCCCeEEEEEEecC
Confidence            9999999999999999999877667889999999999999999998 779999987432   33457899999999863

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=80.66  E-value=1.8  Score=39.13  Aligned_cols=95  Identities=20%  Similarity=0.058  Sum_probs=56.3

Q ss_pred             eeeeecCCccccccCcCCcccCCCCCCCCCCeEEEEecCC-CeEEEEEecCCCCeEEEEEecCCcEEeecccccccceec
Q psy949           63 VHVLDLEQKGYIKAHKGYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE  141 (569)
Q Consensus        63 VhVNEYypgGY~~ArgDGIgPHVDs~~~fGpvIASLSLGS-~rVM~FR~kk~~g~kVsV~LPpRSLLIMSGEARY~WtHG  141 (569)
                      +.++.|.+-. .+....|+++|.|-    | .|..|--.. ..-+....   .+..+.|.-.+|+++|.-|++=..|+.|
T Consensus       156 lr~~~YP~~~-~~~~~~g~~~HtD~----~-~lTlL~q~~~~ggl~~~~---~g~Wi~v~p~~~~~vVnvGD~l~~~Tng  226 (307)
T d1w9ya1         156 TKVSNYPPCP-KPDLIKGLRAHTDA----G-GIILLFQDDKVSGLQLLK---DGQWIDVPPMRHSIVVNLGDQLEVITNG  226 (307)
T ss_dssp             EEEEECCCCS-CGGGGSSCCCBCCS----S-SEEEEEESSSCCCEEEEE---TTEEEECCCCTTCEEEEECHHHHHHTTT
T ss_pred             ceecCCCCCc-cccccccccccccc----c-eeEEeeccCCCCeEEEec---CCcEEEeccCCCeEEEEcchhhHHhhCC
Confidence            3455554422 12234589999994    3 444433211 11122222   2689999999999999999999999988


Q ss_pred             cccccccCCCCccccCCCeEEEEeccC
Q psy949          142 VLENERSYFGDLFVPRGRRISVICRNT  168 (569)
Q Consensus       142 Ip~Rk~D~~dG~~v~RgrRISLTFR~V  168 (569)
                      .-+.....+-.  .....|+|+.|=..
T Consensus       227 ~~kSt~HRVv~--~~~~~R~Si~~F~~  251 (307)
T d1w9ya1         227 KYKSVMHRVIA--QKDGARMSLASFYN  251 (307)
T ss_dssp             SSCCCCEEECC--CSSSCCEEEEEEEE
T ss_pred             cccCcCceeec--CCCCCcEEEEEEee
Confidence            76654221100  01246888876443