Psyllid ID: psy9686

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------77
Protein Sequence
MKPIKYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLGSQANSYNWAHMLIVTTGS
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEEccEEEEccccccccccccccccccccccccccEEEEEEcccccccccccccEEEEEccccccccccHHHccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccccccccEEEEEEccccccccccccccccccccEEEEEEccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccEEEEcccccccccccccccccccccccccccEEcccccccccccccccccccccEEEccccccccccccccccccccccccccEEcccccEEEEccccccccccccccccccccccccccccEEEcccccccEEEEccccccccccccccccccccccccccccccEEEcccccccEEEEccccccccccccccccccccccccccccccccccEEEcccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccccEEEEccccEEcccccEccccccccccEEHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccccccHHHcccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHccHccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEcccEcccccccccEEccccEEccccEEccccccccccEEHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHccccccccHHccccccccccccccccEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccEEcHcHHHHHHHHccccccccccccccccccccccEEEEcccccccEEEEccccccccccccccccccccccccccccccEEccccccccccccccccccEEccccccccccccccccccccccccccccccccccEEEEcccccccccccccccHHcccccccccccEEEcccccccEEEEccccccccccccccccccccccccccccccEEEccccccEEEEEccccccccccccccccccccccccccEEcccccccccHHHHHHHHEHcccc
Coil and Loop (DISEMBL)
mkpikytrpcldcrgsrdhgifqindkywctasgpagkechakcssfednnitddVACVVKIHSQtqrargngfqawstyhycntnskvstYYSSSFNCLVLICFLSCILKSSTLNSlrslgggftgfhsgqmsglaryggvspstILCIKVSTLSRILIYIFKIWCKThmalsrltprylhvdtyskisdpiftdRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHcrnegrpqsamhfsPIAACLLVLVYCTllprqiegkrfgACELAKFLVRqrgiarrdvptWVCIAtkesnrnsnarspkngngsrdhgifqindkywctasgpagkechakcssfednnitddVACVVKIHSQtqrargngfqawstyhycntnskvstydhaddmgevSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLfkdhaddmgtCTWEKLALALAKKkthpmfgklahfESQELFLSSalkkpgaaalggcagrpcrnngtctpvsggvvnftctcpsggqgqsgleiTPVYLWLMKLKTLVMVQYYFRrkstsphksrgqgqsgleiTPVYLWLMKMKTLVMVQYYLQQnisplkdgnlsfycnctedftgeycqfensaacvtlnpcqnnatcvaspgdkqitclclkggtvsseycqfensaacvtlnpcqnnatcvaspgdkqitclclkgfegphrelpvesvdeppsedetsvdlqlgsqansyNWAHMLIVTTGS
Flexible Loop (DISEMBL)
mkpikytrpcldcrgsrDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFlvrqrgiarrdvptwvciatkesnrnsnarspkngngsrdHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKstsphksrgqgqsglEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLgsqansynwAHMLIVTTGS
Low Complexity Region (SEG)
MKPIKYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEklalalakkkTHPMFGKLAHFESQELFLSSalkkpgaaalggcagrpcrNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLGSQANSYNWAHMLIVTTGS
Disordered region (IsUnstruct)
*****YTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIAT*********************GIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFR****************LEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFE*******************************SYNWAHMLIV****
Disordered Region (DISOPRED)
****KYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQ***GNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATK****************SRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLGSQANSYNWAHMLIVTTG*
Disordered Region (DISEMBL)
MKPIKYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESN*************SRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRR*************SGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELP****************LQLGSQANSYNWAHMLIVTTGS
Disordered Region (DISPRO)
*KPIKYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALK***AAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLGSQANSYNWAHMLIVTTG*
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPIKYTRPCLDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYYSSSFNCLVLICFLSCILKSSTLNSLRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYIFKIWCKTHMALSRLTPRYLHVDTYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISLEIFKELNGLNFRIKVFSHCRNEGRPQSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHPMFGKLAHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDETSVDLQLGSQANSYNWAHMLIVTTGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	769	2.2.26 [Sep-21-2011]
Q17005	140	Lysozyme c-1 OS=Anopheles	no	N/A	0.157	0.864	0.425	3e-19
Q7YT16	141	Lysozyme 1 OS=Musca domes	N/A	N/A	0.143	0.780	0.420	7e-19
P83972	140	Lysozyme D OS=Drosophila	no	N/A	0.141	0.778	0.393	2e-16
P83971	140	Lysozyme A/C OS=Drosophil	no	N/A	0.141	0.778	0.393	3e-16
P29615	141	Lysozyme P OS=Drosophila	no	N/A	0.163	0.893	0.370	3e-16
P67979	148	Lysozyme C OS=Trachypithe	N/A	N/A	0.175	0.912	0.368	3e-16
P67980	148	Lysozyme C OS=Trachypithe	N/A	N/A	0.175	0.912	0.368	3e-16
Q08694	140	Lysozyme B OS=Drosophila	no	N/A	0.141	0.778	0.393	3e-16
P79811	148	Lysozyme C OS=Nasalis lar	N/A	N/A	0.175	0.912	0.368	3e-16
P79847	148	Lysozyme C OS=Pygathrix n	N/A	N/A	0.175	0.912	0.368	3e-16

>sp|Q17005|LYSC1_ANOGA Lysozyme c-1 OS=Anopheles gambiae GN=AGAP007347 PE=2 SV=2

 Score = 97.4 bits (241), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 13/134 (9%)

Query: 263 LLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPK 322
           LL +V C  +    E K FG CELAK L    GIA+  +P WVC+   ES  +++A + K
Sbjct: 8   LLAIVACCAVA---EAKTFGKCELAKALANN-GIAKASLPDWVCLVQNESAFSTSA-TNK 62

Query: 323 NGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARG 382
           N NGS D+GIFQIN+KYWC  SG    +C   C +  +++ITDD+ C   IH +      
Sbjct: 63  NKNGSTDYGIFQINNKYWCD-SGYGSNDCKIACKNLLNDDITDDIKCAKLIHKR------ 115

Query: 383 NGFQAWSTY-HYCN 395
           +GF AW  + ++CN
Sbjct: 116 HGFNAWYGWKNHCN 129

Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
Anopheles gambiae (taxid: 7165)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 7

>sp|Q7YT16|LYS1_MUSDO Lysozyme 1 OS=Musca domestica PE=1 SV=1

 Score = 96.7 bits (239), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
           GK F  C LA+ +    G+ + ++P W CIA  ES+  +N   P N NGS D+GIFQIN+
Sbjct: 19  GKTFTRCSLAREMY-ALGVPKSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINN 77

Query: 338 KYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            YWC  S    +  ECH  C +   +NI++ V C  KI SQ       G+ AWST+ YC
Sbjct: 78  YYWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQ------QGWTAWSTWKYC 130

May not function as a self-defense protein, but as a digestive enzyme, probably in the gut of the insect body. Inactive towards Micrococcus luteus. Active toward glycol chitin.

Musca domestica (taxid: 7370)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P83972|LYSD_DROME Lysozyme D OS=Drosophila melanogaster GN=LysD PE=2 SV=1

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 13/122 (10%)

Query: 278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
           G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N NGS D+GIFQIND
Sbjct: 18  GRTMDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQIND 76

Query: 338 KYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
            YWC    P+G+    EC   C++   ++IT  V C  K+ SQ       G+ AWST+HY
Sbjct: 77  YYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ------QGWSAWSTWHY 128

Query: 394 CN 395
           C+
Sbjct: 129 CS 130

Unlikely to play an active role in the humoral immune defense. May have a function in the digestion of bacteria in the food.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P83971|LYSA_DROME Lysozyme A/C OS=Drosophila melanogaster GN=LysA PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 13/122 (10%)

Query: 278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
           G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N NGS D+GIFQIND
Sbjct: 18  GRTMDRCSLAREM-SNLGVPRDQLNKWACIAEHESSYRTGVVGPENYNGSNDYGIFQIND 76

Query: 338 KYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
            YWC    P+G+    EC   C++   ++IT  V C  K+ SQ       G+ AWST+HY
Sbjct: 77  YYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ------QGWSAWSTWHY 128

Query: 394 CN 395
           C+
Sbjct: 129 CS 130

Unlikely to play an active role in the humoral immune defense. May have a function in the digestion of bacteria in the food.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P29615|LYSP_DROME Lysozyme P OS=Drosophila melanogaster GN=LysP PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 9/135 (6%)

Query: 263 LLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPK 322
            LV+   TL     + +    C LA+ + +  G+ R  +  W CIA  ES+  +    P 
Sbjct: 4   FLVICALTLTAVATQARTMDRCSLAREMSK-LGVPRDQLAKWTCIAQHESSFRTGVVGPA 62

Query: 323 NGNGSRDHGIFQINDKYWCT-ASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRA 380
           N NGS D+GIFQIN+KYWC  A G  +  EC   C++   ++IT+ V C  KI  Q    
Sbjct: 63  NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQRQ---- 118

Query: 381 RGNGFQAWSTYHYCN 395
              G+ AWST+ YC+
Sbjct: 119 --QGWTAWSTWKYCS 131

Unlikely to play an active role in the humoral immune defense. May have a function in the digestion of bacteria in the food.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P67979|LYSC_TRAOB Lysozyme C OS=Trachypithecus obscurus GN=LYZ PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSP 321
           L+++   LL   ++GK F  CELA+ L +    G     +  WVC+A  ES  N+ A + 
Sbjct: 4   LIILGLVLLSVTVQGKIFERCELARTLKKLGLDGYKGVSLANWVCLAKWESGYNTEATNY 63

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
             G+ S D+GIFQIN +YWC      G    CH  CS+   NNI D VAC  ++ S  Q 
Sbjct: 64  NPGDESTDYGIFQINSRYWCNNGKTPGAVDACHISCSALLQNNIADAVACAKRVVSDPQ- 122

Query: 380 ARGNGFQAWSTYHYCNTNSKVSTY 403
               G +AW  +     N  VS Y
Sbjct: 123 ----GIRAWVAWRNHCQNKDVSQY 142

Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Also plays a role in digestion in this species.

Trachypithecus obscurus (taxid: 54181)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P67980|LYSC_TRAFR Lysozyme C OS=Trachypithecus francoisi GN=LYZ PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSP 321
           L+++   LL   ++GK F  CELA+ L +    G     +  WVC+A  ES  N+ A + 
Sbjct: 4   LIILGLVLLSVTVQGKIFERCELARTLKKLGLDGYKGVSLANWVCLAKWESGYNTEATNY 63

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
             G+ S D+GIFQIN +YWC      G    CH  CS+   NNI D VAC  ++ S  Q 
Sbjct: 64  NPGDESTDYGIFQINSRYWCNNGKTPGAVDACHISCSALLQNNIADAVACAKRVVSDPQ- 122

Query: 380 ARGNGFQAWSTYHYCNTNSKVSTY 403
               G +AW  +     N  VS Y
Sbjct: 123 ----GIRAWVAWRNHCQNKDVSQY 142

Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Also plays a role in digestion in this species.

Trachypithecus francoisi (taxid: 54180)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q08694|LYSB_DROME Lysozyme B OS=Drosophila melanogaster GN=LysB PE=2 SV=2

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 13/122 (10%)

Query: 278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
           G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N NGS D+GIFQIND
Sbjct: 18  GRTMDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQIND 76

Query: 338 KYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
            YWC    P+G+    EC   C++   ++IT  V C  K+ SQ       G+ AWST+HY
Sbjct: 77  YYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ------QGWSAWSTWHY 128

Query: 394 CN 395
           C+
Sbjct: 129 CS 130

Unlikely to play an active role in the humoral immune defense. May have a function in the digestion of bacteria in the food.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P79811|LYSC_NASLA Lysozyme C OS=Nasalis larvatus GN=LYZ PE=3 SV=1

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSP 321
           L+++   LL   ++GK F  CELA+ L +    G     +  WVC+A  ES  N+ A + 
Sbjct: 4   LIILGLVLLSVTVQGKIFERCELARTLKKLGLDGYKGVSLANWVCLAKWESGYNTEATNY 63

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
             G+ S D+GIFQIN +YWC      G    CH  CS+   NNI D VAC  ++ S  Q 
Sbjct: 64  NPGDESTDYGIFQINSRYWCNNGKTPGAVDACHISCSALLQNNIADAVACAKRVVSDPQ- 122

Query: 380 ARGNGFQAWSTYHYCNTNSKVSTY 403
               G +AW  +     N  VS Y
Sbjct: 123 ----GIRAWVAWRNHCQNRDVSQY 142

Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.

Nasalis larvatus (taxid: 43780)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P79847|LYSC_PYGNE Lysozyme C OS=Pygathrix nemaeus GN=LYZ PE=3 SV=1

 Score = 87.4 bits (215), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSP 321
           L+++   LL   ++GK F  CELA+ L +    G     +  WVC+A  ES  N+ A + 
Sbjct: 4   LIILGLVLLSVTVQGKIFERCELARTLKKLGLDGYKGVSLANWVCLAKWESGYNTEATNY 63

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
             G+ S D+GIFQIN +YWC      G    CH  CS+   NNI D VAC  ++ S  Q 
Sbjct: 64  NPGDESTDYGIFQINSRYWCNNGKTPGAVDACHISCSALLQNNIADAVACAKRVVSDPQ- 122

Query: 380 ARGNGFQAWSTYHYCNTNSKVSTY 403
               G +AW  +     N  VS Y
Sbjct: 123 ----GVRAWVAWRNHCQNKDVSQY 142

Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.

Pygathrix nemaeus (taxid: 54133)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	769
260447050	590	lysozyme precursor [Tribolium castaneum]	0.191	0.249	0.448	9e-26
195127299	1195	GI13315 [Drosophila mojavensis] gi|19391	0.193	0.124	0.417	1e-25
270004918	148	hypothetical protein TcasGA2_TC010351 [T	0.171	0.891	0.485	1e-25
195325805	1056	GM24992 [Drosophila sechellia] gi|194118	0.159	0.116	0.456	2e-25
256861417	590	lysozyme [Tribolium castaneum]	0.191	0.249	0.441	2e-25
256861419	590	lysozyme [Tribolium castaneum]	0.176	0.230	0.479	2e-25
195492651	967	GE20392 [Drosophila yakuba] gi|194180184	0.231	0.184	0.370	7e-25
194749625	1337	GF24155 [Drosophila ananassae] gi|190624	0.153	0.088	0.453	1e-24
195376757	1101	GJ12084 [Drosophila virilis] gi|19415431	0.156	0.108	0.450	1e-24
195588547	868	GD13037 [Drosophila simulans] gi|1941960	0.159	0.141	0.448	2e-24

>gi|260447050|ref|NP_001159495.1| lysozyme precursor [Tribolium castaneum]

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 92/154 (59%), Gaps = 7/154 (4%)

Query: 252 SAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKE 311
           S    +P++  L++L     +  QIE K F  CELAK L  +  I    + TW+CIA  E
Sbjct: 296 SKSKMNPLSKLLVLLFVSLCVSLQIEAKVFKRCELAKELKNKHHIPGNQLATWMCIANYE 355

Query: 312 SNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVV 371
           S  N+ A + K G    DHG+FQI+  YWC+ S   GK C+AKCS F +N+I DDVACV 
Sbjct: 356 SGFNTAAINKKTG----DHGLFQISQIYWCSNSNKPGKACNAKCSDFRNNDIKDDVACVK 411

Query: 372 KIHSQTQRARGNGFQAWSTY-HYC--NTNSKVST 402
           KI+++ Q+  GNGF AW  Y  YC  N N+ +ST
Sbjct: 412 KIYNEHQKLSGNGFNAWVAYKKYCRGNNNNNLST 445

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195127299|ref|XP_002008106.1| GI13315 [Drosophila mojavensis] gi|193919715|gb|EDW18582.1| GI13315 [Drosophila mojavensis]

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 243 HCRNEGRPQSAMHFSP-------IAACLLVLVYCTLLPRQIE--GKRFGACELAKFLVRQ 293
           HCR+  R + A  F P       I     V    T L R+ +  GK +  CELAK L  +
Sbjct: 749 HCRDRSRAEVASCFEPNEIEKEPIRPVKPVKPAYTDLVRKPKPKGKIYSRCELAKELYHK 808

Query: 294 RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHA 353
             +  +++PTWVCIA  ES+ N+ A    N +GS DHG+FQI+D YWCT     GK CH 
Sbjct: 809 HKVPMQEIPTWVCIAQHESSFNTAAVGRLNADGSEDHGLFQISDLYWCTHGEGGGKACHI 868

Query: 354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           +C    D++ITDDV C+  IH +  R  G+GF AW+ Y
Sbjct: 869 ECDRLLDSDITDDVQCIRTIHEEHTRISGDGFNAWTVY 906

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004918|gb|EFA01366.1| hypothetical protein TcasGA2_TC010351 [Tribolium castaneum]

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 87/138 (63%), Gaps = 6/138 (4%)

Query: 263 LLVLVYCTL-LPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSP 321
           LLVL++ +L +  QIE K F  CELAK L  +  I    + TW+CIA  ES  N+ A + 
Sbjct: 7   LLVLLFVSLCVSLQIEAKVFKRCELAKELKNKHHIPGNQLATWMCIANYESGFNTAAINK 66

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRAR 381
           K G    DHG+FQI+  YWC+ S   GK C+AKCS F +N+I DDVACV KI+++ Q+  
Sbjct: 67  KTG----DHGLFQISQIYWCSNSNKPGKACNAKCSDFRNNDIKDDVACVKKIYNEHQKLS 122

Query: 382 GNGFQAWSTY-HYCNTNS 398
           GNGF AW  Y  YC  N+
Sbjct: 123 GNGFNAWVAYKKYCRGNN 140

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195325805|ref|XP_002029621.1| GM24992 [Drosophila sechellia] gi|194118564|gb|EDW40607.1| GM24992 [Drosophila sechellia]

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 80/127 (62%)

Query: 265 VLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNG 324
           V  Y  +   Q +GK +  CELA+ L  Q  +  R +PTWVCIA  ES+ N+ A    N 
Sbjct: 171 VQQYHQVAQIQPQGKIYSRCELAQELYYQHKLPMRQIPTWVCIAQHESSFNTAAVGRLNA 230

Query: 325 NGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 384
           +GS DHG+FQI+D +WCT    AGK CHA C+ F D++I+DDV C+ +IH +  +  G+G
Sbjct: 231 DGSADHGLFQISDLFWCTHDQRAGKGCHATCNQFLDSSISDDVQCIRRIHQEHTQISGDG 290

Query: 385 FQAWSTY 391
           F AW+ Y
Sbjct: 291 FNAWTVY 297

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|256861417|gb|ACV32411.1| lysozyme [Tribolium castaneum]

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 7/154 (4%)

Query: 252 SAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKE 311
           S    +P++  L++L     +  Q+E K F  CELAK L  +  I    + TW+CIA  E
Sbjct: 296 SKSKMNPLSKLLVLLFISLCILFQVEAKVFKRCELAKELKNKHHIPGNQLATWMCIANYE 355

Query: 312 SNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVV 371
           S  N+ A + K G    DHG+FQI+  YWC+ S   GK C+AKCS F +N+I DDVACV 
Sbjct: 356 SGYNTAAINKKTG----DHGLFQISQIYWCSNSNKPGKACNAKCSDFRNNDIKDDVACVK 411

Query: 372 KIHSQTQRARGNGFQAWSTY-HYC--NTNSKVST 402
           KI+ + Q+  GNGF AW  Y  YC  N N+ +ST
Sbjct: 412 KIYKEHQKLSGNGFNAWVAYKKYCRGNNNNNLST 445

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|256861419|gb|ACV32412.1| lysozyme [Tribolium castaneum]

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 91/144 (63%), Gaps = 8/144 (5%)

Query: 263 LLVLVYCTL-LPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSP 321
           LLVL++ +L +  Q+E K F  CELAK L  +  I    + TW+CIA  ES  N+ A + 
Sbjct: 306 LLVLLFISLCVLFQVEAKVFKRCELAKKLKNKHHIPGNQLATWMCIANYESGYNTAAINK 365

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRAR 381
           K G    DHG+FQI+  YWC+ S   GK C+AKCS F +N+I DDVACV KI+++ Q+  
Sbjct: 366 KTG----DHGLFQISQIYWCSNSNKPGKACNAKCSDFRNNDIKDDVACVKKIYNEHQKLS 421

Query: 382 GNGFQAWSTY-HYC--NTNSKVST 402
           GNGF AW  Y  YC  N N+ +ST
Sbjct: 422 GNGFNAWVAYKKYCRGNNNNNLST 445

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195492651|ref|XP_002094083.1| GE20392 [Drosophila yakuba] gi|194180184|gb|EDW93795.1| GE20392 [Drosophila yakuba]

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 3/181 (1%)

Query: 277 EGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           + K +  CELAK L  +  +  R++PTWVCIA  ES+ N+ A    N +GS DHG+FQI+
Sbjct: 596 KAKIYNRCELAKELYHRHKMPMREIPTWVCIAEHESSFNTAAVGKLNSDGSEDHGLFQIS 655

Query: 337 DKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY--HYC 394
           D YWCT    +GK CH +C    D++ITDDV C+  IH +  R  G+GF AW+ Y  H  
Sbjct: 656 DIYWCTHDQTSGKACHIECDRLLDSDITDDVQCIRTIHEEHTRLSGDGFNAWTVYNGHCR 715

Query: 395 NTN-SKVSTYDHADDMGEVSACACYMHVNYLGSSLKLETVLMSSEKIFISYSSTHHISKM 453
           N N +++S     +++ E    + Y  V+   S   L     +     ISY+    +S +
Sbjct: 716 NQNLAQLSDCFDGNEISEADKTSHYAPVSVTPSVKPLHASQEAKPHDSISYAQNPFLSLL 775

Query: 454 A 454
            
Sbjct: 776 G 776

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194749625|ref|XP_001957239.1| GF24155 [Drosophila ananassae] gi|190624521|gb|EDV40045.1| GF24155 [Drosophila ananassae]

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 77/119 (64%)

Query: 273 PRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGI 332
           P + +GK +  CELAK L  +  +  +++PTWVCIA  ES+ N+ A    N +GS DHG+
Sbjct: 600 PAKPKGKIYNRCELAKELYHKHRMPMKEIPTWVCIAQHESSFNTAAVGRLNADGSADHGL 659

Query: 333 FQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           FQI+D YWC+    +GK CH +C S  D++I+DDV C+  IH +  R  G+GF AW+ Y
Sbjct: 660 FQISDLYWCSHDQSSGKACHIECDSLLDSDISDDVKCIRTIHEEHTRLSGDGFNAWTVY 718

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195376757|ref|XP_002047159.1| GJ12084 [Drosophila virilis] gi|194154317|gb|EDW69501.1| GJ12084 [Drosophila virilis]

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 77/122 (63%)

Query: 270 TLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRD 329
           +L+P + +GK +  CELA+ L  Q  +  + +PTWVCIA  ES+ N+ A    N +GS D
Sbjct: 180 SLVPERRQGKIYSRCELAQELFYQHKLPMQQIPTWVCIAQHESSYNTAAVGRLNADGSAD 239

Query: 330 HGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWS 389
           HG+FQI+D YWCT     GK C A C  F D++I DDV C+ +IH +  +  G+GF AW+
Sbjct: 240 HGLFQISDLYWCTHDQRGGKGCRAGCQQFLDSSIADDVQCIRRIHQEHTQISGDGFNAWT 299

Query: 390 TY 391
            Y
Sbjct: 300 VY 301

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195588547|ref|XP_002084019.1| GD13037 [Drosophila simulans] gi|194196028|gb|EDX09604.1| GD13037 [Drosophila simulans]

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 79/127 (62%)

Query: 265 VLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNG 324
           V  Y  +   Q +GK +  CELA+ L  Q  +    +PTWVCIA  ES+ N+ A    N 
Sbjct: 171 VQQYHQVAQIQPQGKIYSRCELAQELYYQHKLPMPQIPTWVCIAQHESSFNTAAVGRLNA 230

Query: 325 NGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 384
           +GS DHG+FQI+D +WCT    AGK CHA C+ F D++I+DDV C+ +IH +  +  G+G
Sbjct: 231 DGSADHGLFQISDLFWCTHDQRAGKGCHATCNQFLDSSISDDVQCIRRIHQEHTQISGDG 290

Query: 385 FQAWSTY 391
           F AW+ Y
Sbjct: 291 FNAWTVY 297

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	769
FB|FBgn0035813	972	CG8492 [Drosophila melanogaste	0.184	0.146	0.413	2e-41
FB|FBgn0004425	140	LysB "Lysozyme B" [Drosophila	0.158	0.871	0.382	1.9e-18
FB|FBgn0004427	140	LysD "Lysozyme D" [Drosophila	0.141	0.778	0.393	4e-18
FB|FBgn0004426	140	LysC "Lysozyme C" [Drosophila	0.141	0.778	0.393	5.1e-18
FB|FBgn0004430	140	LysS "Lysozyme S" [Drosophila	0.159	0.878	0.358	6.6e-18
FB|FBgn0004428	140	LysE "Lysozyme E" [Drosophila	0.158	0.871	0.367	1.1e-17
FB|FBgn0004431	142	LysX "Lysozyme X" [Drosophila	0.162	0.880	0.352	1.1e-17
FB|FBgn0004429	141	LysP "Lysozyme P" [Drosophila	0.162	0.886	0.373	1.4e-17
UNIPROTKB|P81708	129	P81708 "Lysozyme C, milk isozy	0.154	0.922	0.379	3.7e-17
UNIPROTKB|G1K265	148	LYZ "Uncharacterized protein"	0.172	0.898	0.376	7.8e-17

FB|FBgn0035813 CG8492 [Drosophila melanogaster (taxid:7227)]

 Score = 313 (115.2 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
 Identities = 60/145 (41%), Positives = 87/145 (60%)

Query:   277 EGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
             + K +  CELAK L  +     R++PTWVCIA  ES+ N+ A    N +GS DHG+FQI+
Sbjct:   594 KAKIYNRCELAKELYHRHKFPMREIPTWVCIAEHESSFNTAAVGKLNADGSEDHGLFQIS 653

Query:   337 DKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YC- 394
             D YWCT    +GK CH +C    D++I+DDV C+  IH +  R  G+GF AW+ Y+ +C 
Sbjct:   654 DIYWCTHDQTSGKACHIECDRLLDSDISDDVQCIRTIHEEHTRLSGDGFNAWTVYNGHCR 713

Query:   395 NTN-SKVSTYDHADDMGEVSACACY 418
             N N +K+S     +++ E    + Y
Sbjct:   714 NQNLAKLSDCFDGNEISEADKTSHY 738

GO:0003796 "lysozyme activity" evidence=ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

FB|FBgn0004425 LysB "Lysozyme B" [Drosophila melanogaster (taxid:7227)]

 Score = 233 (87.1 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 52/136 (38%), Positives = 73/136 (53%)

Query:   264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKN 323
             +VLV   L    + G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N
Sbjct:     5 IVLVALALAAPAL-GRTMDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPEN 62

Query:   324 GNGSRDHGIFQINDKYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
              NGS D+GIFQIND YWC    P+G+    EC   C++   ++IT  V C  K+ SQ   
Sbjct:    63 YNGSNDYGIFQINDYYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ--- 117

Query:   380 ARGNGFQAWSTYHYCN 395
                 G+ AWST+HYC+
Sbjct:   118 ---QGWSAWSTWHYCS 130

GO:0003796 "lysozyme activity" evidence=IEA;ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

FB|FBgn0004427 LysD "Lysozyme D" [Drosophila melanogaster (taxid:7227)]

 Score = 230 (86.0 bits), Expect = 4.0e-18, P = 4.0e-18
 Identities = 48/122 (39%), Positives = 67/122 (54%)

Query:   278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
             G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N NGS D+GIFQIND
Sbjct:    18 GRTMDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQIND 76

Query:   338 KYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
              YWC    P+G+    EC   C++   ++IT  V C  K+ SQ       G+ AWST+HY
Sbjct:    77 YYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ------QGWSAWSTWHY 128

Query:   394 CN 395
             C+
Sbjct:   129 CS 130

GO:0003796 "lysozyme activity" evidence=ISS;NAS;IDA

GO:0004568 "chitinase activity" evidence=IDA

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

FB|FBgn0004426 LysC "Lysozyme C" [Drosophila melanogaster (taxid:7227)]

 Score = 229 (85.7 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 48/122 (39%), Positives = 67/122 (54%)

Query:   278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
             G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N NGS D+GIFQIND
Sbjct:    18 GRTMDRCSLAREM-SNLGVPRDQLNKWACIAEHESSYRTGVVGPENYNGSNDYGIFQIND 76

Query:   338 KYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
              YWC    P+G+    EC   C++   ++IT  V C  K+ SQ       G+ AWST+HY
Sbjct:    77 YYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ------QGWSAWSTWHY 128

Query:   394 CN 395
             C+
Sbjct:   129 CS 130

GO:0003796 "lysozyme activity" evidence=IEA;ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0032504 "multicellular organism reproduction" evidence=IEP

GO:0005615 "extracellular space" evidence=IDA

FB|FBgn0004430 LysS "Lysozyme S" [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 6.6e-18, P = 6.6e-18
 Identities = 47/131 (35%), Positives = 68/131 (51%)

Query:   266 LVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGN 325
             LV   +    + G+    C LA+ +    G+ R  +  W CIA  ES+  +    P N +
Sbjct:     7 LVLLAIAAPALAGRTLDRCSLAREMA-DLGVPRDQLDKWTCIAQHESDYRTWVVGPANSD 65

Query:   326 GSRDHGIFQINDKYWCTASGPAG-KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 384
             GS D+GIFQIND YWC A G     EC   C++   ++IT+ V C  K+ SQ       G
Sbjct:    66 GSNDYGIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQ------QG 119

Query:   385 FQAWSTYHYCN 395
             + AW+ +HYC+
Sbjct:   120 WSAWAVWHYCS 130

GO:0003796 "lysozyme activity" evidence=IEA;ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

FB|FBgn0004428 LysE "Lysozyme E" [Drosophila melanogaster (taxid:7227)]

 Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 50/136 (36%), Positives = 73/136 (53%)

Query:   264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKN 323
             +VLV   +    + G+    C LA+ +    G+ R  +  W CIA  ES+  +    P+N
Sbjct:     5 IVLVALAMAAPAL-GRTLDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPEN 62

Query:   324 GNGSRDHGIFQINDKYWCTASGPAGK----ECHAKCSSFEDNNITDDVACVVKIHSQTQR 379
              NGS D+GIFQIN+ YWC    P+G+    EC   C++   ++IT  V C  K+ SQ   
Sbjct:    63 YNGSNDYGIFQINNYYWCAP--PSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ--- 117

Query:   380 ARGNGFQAWSTYHYCN 395
                 G+ AWST+HYC+
Sbjct:   118 ---QGWSAWSTWHYCS 130

GO:0003796 "lysozyme activity" evidence=IEA;ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

FB|FBgn0004431 LysX "Lysozyme X" [Drosophila melanogaster (taxid:7227)]

 Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 49/139 (35%), Positives = 72/139 (51%)

Query:   259 IAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNA 318
             +  C+L LV   +L     G+    C LA+ +    G++R  +  W CIA  ES+  +  
Sbjct:     5 LGICVLALVTPAVL-----GRTMDRCSLAREMANM-GVSRDQLSKWACIAEHESSYRTGV 58

Query:   319 RSPKNGNGSRDHGIFQINDKYWCT-ASGPAGKE-CHAKCSSFEDNNITDDVACVVKIHSQ 376
               P N +GS D+GIFQIND YWC  +SG      C   C++   ++I   V C +K+  Q
Sbjct:    59 VGPPNTDGSNDYGIFQINDMYWCQPSSGKFSHNGCDVSCNALLTDDIKSSVRCALKVLGQ 118

Query:   377 TQRARGNGFQAWSTYHYCN 395
                    G+ AWST+HYC+
Sbjct:   119 ------QGWSAWSTWHYCS 131

GO:0003796 "lysozyme activity" evidence=ISS;NAS

GO:0006952 "defense response" evidence=ISS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

FB|FBgn0004429 LysP "Lysozyme P" [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 50/134 (37%), Positives = 70/134 (52%)

Query:   264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKN 323
             LV+   TL     + +    C LA+ + +  G+ R  +  W CIA  ES+  +    P N
Sbjct:     5 LVICALTLTAVATQARTMDRCSLAREMSKL-GVPRDQLAKWTCIAQHESSFRTGVVGPAN 63

Query:   324 GNGSRDHGIFQINDKYWCT-ASGPAG-KECHAKCSSFEDNNITDDVACVVKIHSQTQRAR 381
              NGS D+GIFQIN+KYWC  A G     EC   C++   ++IT+ V C  KI  Q     
Sbjct:    64 SNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQRQ----- 118

Query:   382 GNGFQAWSTYHYCN 395
               G+ AWST+ YC+
Sbjct:   119 -QGWTAWSTWKYCS 131

GO:0003796 "lysozyme activity" evidence=IEA;ISS;NAS

GO:0019730 "antimicrobial humoral response" evidence=NAS

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

UNIPROTKB|P81708 P81708 "Lysozyme C, milk isozyme" [Canis lupus familiaris (taxid:9615)]

 Score = 221 (82.9 bits), Expect = 3.7e-17, P = 3.7e-17
 Identities = 49/129 (37%), Positives = 69/129 (53%)

Query:   279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
             K F  CELA+ L  +   G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct:     1 KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 60

Query:   337 DKYWCTA-SGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
              K+WC + S  +   C+  CS F D+NI DD+AC  ++         NG  AW  +  +C
Sbjct:    61 SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAWVKHC 115

Query:   395 NTNSKVSTY 403
                  +S Y
Sbjct:   116 K-GKDLSKY 123

GO:0003796 "lysozyme activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0019835 "cytolysis" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

UNIPROTKB|G1K265 LYZ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 218 (81.8 bits), Expect = 7.8e-17, P = 7.8e-17
 Identities = 55/146 (37%), Positives = 77/146 (52%)

Query:   264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARR---DVPTWVCIATKESNRNSNARS 320
             L+ +   LL   ++GK F  CELA+ L +  G+A      +  WVC+A  ESN N+ A +
Sbjct:     4 LLFLGLLLLSITVQGKIFERCELARTL-KNLGLAGYKGVSLANWVCLAKWESNYNTRATN 62

Query:   321 PKNGNGSRDHGIFQINDKYWCT-ASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQ 378
                G+ S D+GIFQIN +YWC     P A   CH  CS+   ++IT  VAC  ++ S   
Sbjct:    63 YNPGSKSTDYGIFQINSRYWCNDGKTPRAVNACHISCSALLQDDITQAVACAKRVVSDP- 121

Query:   379 RARGNGFQAWSTYH-YCNTNSKVSTY 403
                 NG +AW  +  +C  N  VS Y
Sbjct:   122 ----NGIRAWVAWRAHCE-NRDVSQY 142

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0003796 "lysozyme activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1	LOW CONFIDENCE prediction!
3rd Layer	3.2.1.17	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	769
cd00119	123	cd00119, LYZ1, C-type lysozyme (1, 4-beta-N-acetyl	2e-35
smart00263	127	smart00263, LYZ1, Alpha-lactalbumin / lysozyme C	2e-28
pfam00062	125	pfam00062, Lys, C-type lysozyme/alpha-lactalbumin	3e-25
cd00119	123	cd00119, LYZ1, C-type lysozyme (1, 4-beta-N-acetyl	7e-22
smart00263	127	smart00263, LYZ1, Alpha-lactalbumin / lysozyme C	2e-18
pfam00062	125	pfam00062, Lys, C-type lysozyme/alpha-lactalbumin	1e-14
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	0.001
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	0.002
pfam00008	32	pfam00008, EGF, EGF-like domain	0.002

>gnl|CDD|238066 cd00119, LYZ1, C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA)

 Score =  130 bits (328), Expect = 2e-35
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K F  CELAK L R        +  WVC+A  ES  N+ A +  N +GS D+G+FQIN K
Sbjct: 1   KIFTRCELAKELKRLGLYPGISLANWVCLAEHESGFNTQAVN-NNNDGSTDYGLFQINSK 59

Query: 339 YWCT-ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNT 396
           YWC     P+G  CH  CS   D++ITDD+ C  KI  + Q     GF AW  +  +C  
Sbjct: 60  YWCNDGKTPSGNICHISCSKLLDDDITDDIKCAKKIVKEHQ-----GFDAWVAWKNHCQ- 113

Query: 397 NSKVSTY 403
              +S +
Sbjct: 114 GRDLSQW 120

They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have primarily bacteriolytic function; hydrolysis of peptidoglycan of prokaryotic cell walls and transglycosylation. LA is a calcium-binding metalloprotein that is expressed exclusively in the mammary gland during lactation. LA is the regulatory subunit of the enzyme lactose synthase. The association of LA with the catalytic component of lactose synthase, galactosyltransferase, alters the acceptor substrate specificity of this glycosyltransferase, facilitating biosynthesis of lactose. Length = 123

>gnl|CDD|197612 smart00263, LYZ1, Alpha-lactalbumin / lysozyme C

 Score =  110 bits (276), Expect = 2e-28
 Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 13/130 (10%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  WVC+A  ES  N+ A +  NG  S D+GIFQIN
Sbjct: 1   KVFTRCELARELKRLGLDGYRGISLANWVCLAFHESGYNTQATNYNNGG-STDYGIFQIN 59

Query: 337 DKYWCTASG--PAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-Y 393
            KYWC       +   C   CS   D++ITDDV C  KI S        G  AW  +  +
Sbjct: 60  SKYWCNDGKTPGSVNACGISCSKLLDDDITDDVKCAKKIVSD------QGIDAWVAWKNH 113

Query: 394 CNTNSKVSTY 403
           C     +S +
Sbjct: 114 CQ-GEDLSQW 122

Length = 127

>gnl|CDD|200968 pfam00062, Lys, C-type lysozyme/alpha-lactalbumin family

 Score =  100 bits (252), Expect = 3e-25
 Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 13/131 (9%)

Query: 279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  WVC+A  ES  N+ A +  N NGS D+GIFQIN
Sbjct: 1   KVFTRCELARELKRLGMDGYRGISLANWVCLAFHESGYNTQATN-NNNNGSTDYGIFQIN 59

Query: 337 DKYWCTAS-GPAGK-ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            KYWC     P  K  C   CS   D++ITDD+ C  KI    Q     G  AW  + ++
Sbjct: 60  SKYWCNDGKTPGSKNACGISCSKLLDDDITDDIMCAKKILRDPQ-----GIDAWVAWKNH 114

Query: 394 CNTNSKVSTYD 404
           C+    +S + 
Sbjct: 115 CSE--DLSQWR 123

Alpha-lactalbumin is the regulatory subunit of lactose synthase, changing the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. C-type lysozymes are secreted bacteriolytic enzymes that cleave the peptidoglycan of bacterial cell walls. Structure is a multi-domain, mixed alpha and beta fold, containing four conserved disulfide bonds. Length = 125

>gnl|CDD|238066 cd00119, LYZ1, C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA)

 Score = 91.2 bits (227), Expect = 7e-22
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)

Query: 15  GSRDHGIFQINDKYWCT-ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
           GS D+G+FQIN KYWC     P+G  CH  CS   D++ITDD+ C  KI  + Q     G
Sbjct: 47  GSTDYGLFQINSKYWCNDGKTPSGNICHISCSKLLDDDITDDIKCAKKIVKEHQ-----G 101

Query: 74  FQAWSTYH-YCNTNSKVSTY 92
           F AW  +  +C     +S +
Sbjct: 102 FDAWVAWKNHCQ-GRDLSQW 120

They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have primarily bacteriolytic function; hydrolysis of peptidoglycan of prokaryotic cell walls and transglycosylation. LA is a calcium-binding metalloprotein that is expressed exclusively in the mammary gland during lactation. LA is the regulatory subunit of the enzyme lactose synthase. The association of LA with the catalytic component of lactose synthase, galactosyltransferase, alters the acceptor substrate specificity of this glycosyltransferase, facilitating biosynthesis of lactose. Length = 123

>gnl|CDD|197612 smart00263, LYZ1, Alpha-lactalbumin / lysozyme C

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)

Query: 15  GSRDHGIFQINDKYWCTASG--PAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GIFQIN KYWC       +   C   CS   D++ITDDV C  KI S        
Sbjct: 49  GSTDYGIFQINSKYWCNDGKTPGSVNACGISCSKLLDDDITDDVKCAKKIVSD------Q 102

Query: 73  GFQAWSTYH-YCNTNSKVSTYYSSSF 97
           G  AW  +  +C     +S +     
Sbjct: 103 GIDAWVAWKNHCQ-GEDLSQWIRGCG 127

Length = 127

>gnl|CDD|200968 pfam00062, Lys, C-type lysozyme/alpha-lactalbumin family

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS-GPAGK-ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GIFQIN KYWC     P  K  C   CS   D++ITDD+ C  KI    Q     
Sbjct: 49  GSTDYGIFQINSKYWCNDGKTPGSKNACGISCSKLLDDDITDDIMCAKKILRDPQ----- 103

Query: 73  GFQAWSTY-HYC 83
           G  AW  + ++C
Sbjct: 104 GIDAWVAWKNHC 115

Alpha-lactalbumin is the regulatory subunit of lactose synthase, changing the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. C-type lysozymes are secreted bacteriolytic enzymes that cleave the peptidoglycan of bacterial cell walls. Structure is a multi-domain, mixed alpha and beta fold, containing four conserved disulfide bonds. Length = 125

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 36.8 bits (86), Expect = 0.001
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 694 CVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           C + NPCQN  TCV + G     C C  G+ G +
Sbjct: 5   CASGNPCQNGGTCVNTVGS--YRCSCPPGYTGRN 36

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 694 CVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHR 728
           C   NPC N  TCV +PG     C+C  G+ G   
Sbjct: 2   CAASNPCSNGGTCVNTPGS--YRCVCPPGYTGDRS 34

Length = 36

>gnl|CDD|215652 pfam00008, EGF, EGF-like domain

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 694 CVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           C   NPC N  TCV +PG    TC C +G+ G  
Sbjct: 1   CSPNNPCSNGGTCVDTPGG--YTCECPEGYTGKR 32

There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. Length = 32

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	769
cd00119	123	LYZ1 C-type lysozyme (1, 4-beta-N-acetylmuramidase	100.0
PF00062	125	Lys: C-type lysozyme/alpha-lactalbumin family; Int	100.0
smart00263	127	LYZ1 Alpha-lactalbumin / lysozyme C.	100.0
smart00263	127	LYZ1 Alpha-lactalbumin / lysozyme C.	99.94
cd00119	123	LYZ1 C-type lysozyme (1, 4-beta-N-acetylmuramidase	99.94
PF00062	125	Lys: C-type lysozyme/alpha-lactalbumin family; Int	99.94
KOG1214|consensus	1289		99.65
KOG1219|consensus	4289		99.49
KOG1219|consensus	4289		99.43
KOG1214|consensus	1289		99.3
KOG4289|consensus	2531		99.28
KOG1217|consensus	487		99.2
KOG1217|consensus	487		99.03
KOG4289|consensus	2531		98.99
KOG1225|consensus	525		98.77
KOG1225|consensus	525		98.47
KOG1226|consensus	783		98.28
KOG4260|consensus	350		98.21
KOG4260|consensus	350		98.2
KOG0994|consensus	1758		97.88
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.56
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.47
KOG1226|consensus	783		97.38
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.24
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.24
KOG0994|consensus	1758		97.11
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.06
PRK15328	160	invasion protein IagB; Provisional	97.04
PRK13722	169	lytic transglycosylase; Provisional	96.97
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	96.94
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	96.87
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.76
PRK13888	206	conjugal transfer protein TrbN; Provisional	96.62
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.46
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.35
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.15
smart00181	35	EGF Epidermal growth factor-like domain.	96.06
PF01464	121	SLT: Transglycosylase SLT domain; InterPro: IPR008	95.74
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.73
smart00181	35	EGF Epidermal growth factor-like domain.	95.43
KOG1836|consensus	1705		95.29
PRK13864	245	type IV secretion system lytic transglycosylase Vi	95.08
cd00254	113	LT_GEWL Lytic Transglycosylase (LT) and Goose Egg	94.86
PF12662	24	cEGF: Complement Clr-like EGF-like	94.85
PF12662	24	cEGF: Complement Clr-like EGF-like	94.84
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	94.2
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	94.07
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	93.61
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	93.39
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	93.2
PF06737	77	Transglycosylas: Transglycosylase-like domain; Int	92.59
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	91.67
cd01021	166	GEWL Goose Egg White Lysozyme domain. Eukaryotic "	90.62
smart00051	63	DSL delta serrate ligand.	89.98
KOG1836|consensus	1705		89.65
KOG1218|consensus	316		87.26
PRK13888	206	conjugal transfer protein TrbN; Provisional	85.88
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	85.57
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	85.38
PHA02887	126	EGF-like protein; Provisional	84.28
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	83.39
smart00051	63	DSL delta serrate ligand.	81.39
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	81.14
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	80.79
PRK15470	203	emtA lytic murein endotransglycosylase E; Provisio	80.78
KOG3516|consensus	1306		80.57

>cd00119 LYZ1 C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA)

Probab=100.00  E-value=2.8e-46  Score=347.78  Aligned_cols=119  Identities=42%  Similarity=0.834  Sum_probs=112.5

Q ss_pred             eeecchHHHHHHHHhcCC-CCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC-Cccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGI-ARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP-AGKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~-~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~-~~~~C~~~C~  356 (769)
                      |||+|||||++|++ +|| ++.+|++|||||++||+|||+|+++ |.|||+||||||||++|||+++++ ++|.|+|+|+
T Consensus         1 k~~~rCeLa~~L~~-~g~~~~~~l~~Wvcia~~ES~~nt~a~~~-n~~gs~dyGlfQINs~~WC~~~~~~~~n~C~i~C~   78 (123)
T cd00119           1 KIFTRCELAKELKR-LGLYPGISLANWVCLAEHESGFNTQAVNN-NNDGSTDYGLFQINSKYWCNDGKTPSGNICHISCS   78 (123)
T ss_pred             CcCcHhHHHHHHHH-cCCCCCCCHHHHHHHHHHHHCCCccceec-CCCCCeeEeEEEecchhhccCCCCCCCCCcCCCHH
Confidence            79999999999998 576 9999999999999999999999995 679999999999999999999876 5899999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccc
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDH  405 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~  405 (769)
                      +||+|||+|||+|||+|+++|     +||+||++|+ +|+|+ +|++|..
T Consensus        79 ~Ll~ddI~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~L~~~~~  122 (123)
T cd00119          79 KLLDDDITDDIKCAKKIVKEH-----QGFDAWVAWKNHCQGR-DLSQWVK  122 (123)
T ss_pred             HhccccHHHHHHHHHHHHhcC-----CCchhHHHHHHhCCCC-CCccccC
Confidence            999999999999999999996     7999999999 99997 9999963

They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have primarily bacteriolytic function; hydrolysis of peptidoglycan of prokaryotic cell walls and transglycosylation. LA is a calcium-binding metalloprotein that is expressed exclusively in the mammary gland during lactation. LA is the regulatory subunit of the enzyme lactose synthase. The association of LA with the catalytic component of lactose synthase, galactosyltransferase, alters the acceptor substrate specificity of this glycosyltransferase, facilitating biosynthesis of lactose.

>PF00062 Lys: C-type lysozyme/alpha-lactalbumin family; InterPro: IPR001916 O-Glycosyl hydrolases 3

Probab=100.00  E-value=9.7e-47  Score=352.87  Aligned_cols=117  Identities=39%  Similarity=0.806  Sum_probs=105.8

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Cccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~  354 (769)
                      |||+|||||++|++.  .||++++|+||||||+|||+|||+|+++++ |||+|||||||||+|||++++.  ++|.|+|+
T Consensus         1 Kv~~rCeLa~~L~~~g~~g~~~~~l~~WvCla~~eS~f~T~a~~~~~-~gS~dyGIFQIns~~WC~~~~~~~~~n~C~i~   79 (125)
T PF00062_consen    1 KVFTRCELARELKNAGLDGYPGYSLANWVCLAYHESGFNTSAVNYNN-DGSTDYGIFQINSRYWCSDGKTPGSKNICNIS   79 (125)
T ss_dssp             -BC-HHHHHHHHHHTTGTTBTCBGHHHHHHHHHHHHTTBTT-EEEET-TSEEEETTTTEETTTTSBCSSSTTSSTTTSSB
T ss_pred             CcccHhHHHHHHHHcCCCCcchhhhhheeeeEecccCceeeccccCC-CCccccceeecCchhhccCCCCCCCCCccCCc
Confidence            899999999999973  345589999999999999999999999865 9999999999999999999875  47999999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccc
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTY  403 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~  403 (769)
                      |++||||||+|||+|||+|++++     +||+||++|+ +|+ + +|+.|
T Consensus        80 C~~ll~ddI~ddi~Cak~I~~~~-----~G~~aW~~w~~~C~-~-~L~~~  122 (125)
T PF00062_consen   80 CSDLLDDDITDDIRCAKKIYREP-----QGFNAWVAWKNHCR-K-DLSSW  122 (125)
T ss_dssp             GGGGGSSSTHHHHHHHHHHHTHH-----TGGGGSHHHHHHTT-S-SGGGG
T ss_pred             cccccccchHHHHHHHHHHHcCc-----ccchhhHHHHHhhc-C-CCccc
Confidence            99999999999999999999775     7999999999 999 5 99999

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 22 GH22 from CAZY comprises enzymes with two known activities; lysozyme type C (3.2.1.17 from EC) and alpha-lactalbumins. Asp and/or the carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base. Alpha-lactalbumin [, ] is a milk protein that acts as the regulatory subunit of lactose synthetase, acting to promote the conversion of galactosyltransferase to lactose synthase, which is essential for milk production. In the mammary gland, alpha-lactalbumin changes the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. Lysozymes (3.2.1.17 from EC) act as bacteriolytic enzymes by hydrolyzing the beta(1->4) bonds between N-acetylglucosamine and N-acetylmuramic acid in the peptidoglycan of prokaryotic cell walls. It has also been recruited for a digestive role in certain ruminants and colobine monkeys []. There are at least five different classes of lysozymes []: C (chicken type), G (goose type), phage-type (T4), fungi (Chalaropsis), and bacterial (Bacillus subtilis). There are few similarities in the sequences of the different types of lysozymes. Lysozyme type C and alpha-lactalbumin are similar both in terms of primary sequence and structure, and probably evolved from a common ancestral protein []. Around 35 to 40% of the residues are conserved in both proteins as well as the positions of the four disulphide bonds. There is, however, no similarity in function. Another significant difference between the two enzymes is that all lactalbumins have the ability to bind calcium [], while this property is restricted to only a few lysozymes []. The binding site was deduced using high resolution X-ray structure analysis and was shown to consist of three aspartic acid residues. It was first suggested that calcium bound to lactalbumin stabilised the structure, but recently it has been claimed that calcium controls the release of lactalbumin from the golgi membrane and that the pattern of ion binding may also affect the catalytic properties of the lactose synthetase complex.; PDB: 1HFX_A 1HMK_A 1HFY_B 1FKQ_A 1FKV_A 3B0K_B 1HML_A 1B9O_A 1A4V_A 3B0O_A ....

>smart00263 LYZ1 Alpha-lactalbumin / lysozyme C

Probab=100.00  E-value=2.2e-45  Score=343.93  Aligned_cols=121  Identities=40%  Similarity=0.745  Sum_probs=112.7

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Cccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~  354 (769)
                      |+|+|||||++|++.  +|||+.+|++|||||++||+|||+|+++ |.|||+||||||||++|||+++++  ++|.|+|+
T Consensus         1 k~~~rCeLa~~L~~~gl~g~~~~~l~~WvCia~~ES~~~t~a~~~-n~~gs~dyGLfQINs~~WC~~~~~~~~~n~C~i~   79 (127)
T smart00263        1 KVFTRCELARELKRLGLDGYRGISLANWVCLAFHESGYNTQATNY-NNGGSTDYGIFQINSKYWCNDGKTPGSVNACGIS   79 (127)
T ss_pred             CcCcHhHHHHHHHHhCcCCCCCcCHHHHHHHHHHHhcCCCcceec-CCCCCceeeEEEecccccccCCCCCCCCCcCCCC
Confidence            789999999999972  4999999999999999999999999996 679999999999999999998864  47999999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHAD  407 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~  407 (769)
                      |++||+|||+|||+|||+|+++      +||+||++|+ +|+|+ +|+.|...|
T Consensus        80 C~~Ll~ddI~ddv~CAk~I~~~------~G~~aW~~w~~~C~g~-~l~~~~~~C  126 (127)
T smart00263       80 CSKLLDDDITDDVKCAKKIVSD------QGIDAWVAWKNHCQGE-DLSQWIRGC  126 (127)
T ss_pred             HhhhcCCChHHHHHHHHHHHHH------cCchHHHHHHHhCCCC-CCChhhccC
Confidence            9999999999999999999999      6999999999 99996 999997555

>smart00263 LYZ1 Alpha-lactalbumin / lysozyme C

Probab=99.94  E-value=2.8e-28  Score=228.73  Aligned_cols=79  Identities=39%  Similarity=0.780  Sum_probs=73.8

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      |.|||+||||||||++|||+++++  ++|.|+|+|++||+|||+|||+|||+|+++      +||+||++|+ +|+| ++
T Consensus        46 n~~gs~dyGLfQINs~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~ddv~CAk~I~~~------~G~~aW~~w~~~C~g-~~  118 (127)
T smart00263       46 NNGGSTDYGIFQINSKYWCNDGKTPGSVNACGISCSKLLDDDITDDVKCAKKIVSD------QGIDAWVAWKNHCQG-ED  118 (127)
T ss_pred             CCCCCceeeEEEecccccccCCCCCCCCCcCCCCHhhhcCCChHHHHHHHHHHHHH------cCchHHHHHHHhCCC-CC
Confidence            789999999999999999999874  479999999999999999999999999998      4999999999 9997 79


Q ss_pred             cccccccCc
Q psy9686          89 VSTYYSSSF   97 (769)
Q Consensus        89 ~~~~~~~~~   97 (769)
                      |+.||++|+
T Consensus       119 l~~~~~~C~  127 (127)
T smart00263      119 LSQWIRGCG  127 (127)
T ss_pred             CChhhccCC
Confidence            999998874

>cd00119 LYZ1 C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA)

Probab=99.94  E-value=2.8e-28  Score=227.41  Aligned_cols=77  Identities=40%  Similarity=0.896  Sum_probs=72.6

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC-CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCCc
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKV   89 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~-~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~~   89 (769)
                      |.|||+||||||||++|||+++++ ++|.|+|+|++||+|||+|||+|||+|+++|     +||+||++|+ ||+| ++|
T Consensus        44 n~~gs~dyGlfQINs~~WC~~~~~~~~n~C~i~C~~Ll~ddI~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~~L  117 (123)
T cd00119          44 NNDGSTDYGLFQINSKYWCNDGKTPSGNICHISCSKLLDDDITDDIKCAKKIVKEH-----QGFDAWVAWKNHCQG-RDL  117 (123)
T ss_pred             CCCCCeeEeEEEecchhhccCCCCCCCCCcCCCHHHhccccHHHHHHHHHHHHhcC-----CCchhHHHHHHhCCC-CCC
Confidence            788999999999999999999875 5899999999999999999999999999997     4999999999 9997 799


Q ss_pred             ccccc
Q psy9686          90 STYYS   94 (769)
Q Consensus        90 ~~~~~   94 (769)
                      ++|++
T Consensus       118 ~~~~~  122 (123)
T cd00119         118 SQWVK  122 (123)
T ss_pred             ccccC
Confidence            99984

They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have primarily bacteriolytic function; hydrolysis of peptidoglycan of prokaryotic cell walls and transglycosylation. LA is a calcium-binding metalloprotein that is expressed exclusively in the mammary gland during lactation. LA is the regulatory subunit of the enzyme lactose synthase. The association of LA with the catalytic component of lactose synthase, galactosyltransferase, alters the acceptor substrate specificity of this glycosyltransferase, facilitating biosynthesis of lactose.

>PF00062 Lys: C-type lysozyme/alpha-lactalbumin family; InterPro: IPR001916 O-Glycosyl hydrolases 3

Probab=99.94  E-value=7.9e-28  Score=225.60  Aligned_cols=77  Identities=38%  Similarity=0.867  Sum_probs=71.1

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      +.|||+|||||||||+|||++++.  ++|.|+|+|++||||||+|||.|||+|++++     +||+||++|+ +|+  ++
T Consensus        46 ~~~gS~dyGIFQIns~~WC~~~~~~~~~n~C~i~C~~ll~ddI~ddi~Cak~I~~~~-----~G~~aW~~w~~~C~--~~  118 (125)
T PF00062_consen   46 NNDGSTDYGIFQINSRYWCSDGKTPGSKNICNISCSDLLDDDITDDIRCAKKIYREP-----QGFNAWVAWKNHCR--KD  118 (125)
T ss_dssp             ETTSEEEETTTTEETTTTSBCSSSTTSSTTTSSBGGGGGSSSTHHHHHHHHHHHTHH-----TGGGGSHHHHHHTT--SS
T ss_pred             CCCCccccceeecCchhhccCCCCCCCCCccCCccccccccchHHHHHHHHHHHcCc-----ccchhhHHHHHhhc--CC
Confidence            449999999999999999999884  4699999999999999999999999999776     4999999999 999  59


Q ss_pred             cccccccC
Q psy9686          89 VSTYYSSS   96 (769)
Q Consensus        89 ~~~~~~~~   96 (769)
                      |++| ++|
T Consensus       119 L~~~-~~C  125 (125)
T PF00062_consen  119 LSSW-KGC  125 (125)
T ss_dssp             GGGG-TTS
T ss_pred             Cccc-CCC
Confidence            9999 887

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 22 GH22 from CAZY comprises enzymes with two known activities; lysozyme type C (3.2.1.17 from EC) and alpha-lactalbumins. Asp and/or the carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base. Alpha-lactalbumin [, ] is a milk protein that acts as the regulatory subunit of lactose synthetase, acting to promote the conversion of galactosyltransferase to lactose synthase, which is essential for milk production. In the mammary gland, alpha-lactalbumin changes the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. Lysozymes (3.2.1.17 from EC) act as bacteriolytic enzymes by hydrolyzing the beta(1->4) bonds between N-acetylglucosamine and N-acetylmuramic acid in the peptidoglycan of prokaryotic cell walls. It has also been recruited for a digestive role in certain ruminants and colobine monkeys []. There are at least five different classes of lysozymes []: C (chicken type), G (goose type), phage-type (T4), fungi (Chalaropsis), and bacterial (Bacillus subtilis). There are few similarities in the sequences of the different types of lysozymes. Lysozyme type C and alpha-lactalbumin are similar both in terms of primary sequence and structure, and probably evolved from a common ancestral protein []. Around 35 to 40% of the residues are conserved in both proteins as well as the positions of the four disulphide bonds. There is, however, no similarity in function. Another significant difference between the two enzymes is that all lactalbumins have the ability to bind calcium [], while this property is restricted to only a few lysozymes []. The binding site was deduced using high resolution X-ray structure analysis and was shown to consist of three aspartic acid residues. It was first suggested that calcium bound to lactalbumin stabilised the structure, but recently it has been claimed that calcium controls the release of lactalbumin from the golgi membrane and that the pattern of ion binding may also affect the catalytic properties of the lactose synthetase complex.; PDB: 1HFX_A 1HMK_A 1HFY_B 1FKQ_A 1FKV_A 3B0K_B 1HML_A 1B9O_A 1A4V_A 3B0O_A ....

>KOG1214|consensus

Probab=99.65  E-value=1.5e-15  Score=173.28  Aligned_cols=250  Identities=18%  Similarity=0.361  Sum_probs=177.5

Q ss_pred             cccccccccCcc--CccceeeeEE--ecCcceeEEeecccccccccccccccccccccCCCCceeeccceeehhccCCCC
Q psy9686         413 SACACYMHVNYL--GSSLKLETVL--MSSEKIFISYSSTHHISKMANKFKFNLFKDHADDMGTCTWEKLALALAKKKTHP  488 (769)
Q Consensus       413 ~~C~~~~~~~~~--~~~~~~e~v~--~~~~e~~i~y~~~~~i~~~~~~~~~~~~~~~~~~~~~c~~~~l~~~~~s~~~~~  488 (769)
                      -.|.|+++.+..  ++|++++.|+  +..++.+++++-+..|..+-+.......++++++.+.|.        ......+
T Consensus       639 q~C~h~~~~p~~p~tqql~vd~vfalyn~ee~~lr~a~Sn~igpV~E~S~~~~~npCy~gsh~cd--------t~a~C~p  710 (1289)
T KOG1214|consen  639 QVCRHAPRHPSFPTTQQLNVDRVFALYNDEERVLRFAVSNQIGPVKEDSDPTPVNPCYDGSHMCD--------TTARCHP  710 (1289)
T ss_pred             EEeecCCCCCCCCCceEeecccceeccCccccchhhhhhhcccceecCCCCcccccceecCcccC--------CCccccC
Confidence            358887776633  8899999977  777799999999999999999988888899999999888        2233344


Q ss_pred             CccccceeeeccccccccccCCCccccCCCCCC--CCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccchhcc
Q psy9686         489 MFGKLAHFESQELFLSSALKKPGAAALGGCAGR--PCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPVYLWL  562 (769)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~gc~dideC~s~--PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC~~~~  562 (769)
                      ..+....++|..+|.+   ....|.|+++|+..  .|..+.+|++.+++   |.|+|..||.    +-+|..+..-+   
T Consensus       711 g~~~~~tcecs~g~~g---dgr~c~d~~eca~~~~~CGp~s~Cin~pg~---~rceC~~gy~F~dd~~tCV~i~~pa---  781 (1289)
T KOG1214|consen  711 GTGVDYTCECSSGYQG---DGRNCVDENECATGFHRCGPNSVCINLPGS---YRCECRSGYEFADDRHTCVLITPPA---  781 (1289)
T ss_pred             CCCcceEEEEeeccCC---CCCCCCChhhhccCCCCCCCCceeecCCCc---eeEEEeecceeccCCcceEEecCCC---
Confidence            4555667778777643   44557888999654  49999999999997   9999999984    34464432211   


Q ss_pred             ccCceeeeeeeecccCCCCCCCCC-CCcCCCcccccccccccccccceeeccccccCCCcccc-CCCCcccccCCCCCCC
Q psy9686         563 MKLKTLVMVQYYFRRKSTSPHKSR-GQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKD-GNLSFYCNCTEDFTGE  640 (769)
Q Consensus       563 ~~~~~~~~~~~~~~~Cs~~pC~~~-g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n-~~gsy~C~C~~Gy~G~  640 (769)
                                      ..++|..+ ..|.      +                   ...+.|+. +.++|.|.|.|||.|+
T Consensus       782 ----------------p~n~Ce~g~h~C~------i-------------------~g~a~c~~hGgs~y~C~CLPGfsGD  820 (1289)
T KOG1214|consen  782 ----------------PANPCEDGSHTCA------I-------------------AGQARCVHHGGSTYSCACLPGFSGD  820 (1289)
T ss_pred             ----------------CCCccccCccccC------c-------------------CCceEEEecCCceEEEeecCCccCC
Confidence                            24555443 1121      0                   11234554 4567999999999876


Q ss_pred             --ccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcccc--CCccccC----CCCCCCCCEEecCCCC
Q psy9686         641 --YCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFE--NSAACVT----LNPCQNNATCVASPGD  712 (769)
Q Consensus       641 --~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~--~ideC~s----~~pC~ngg~Cvnt~Gs  712 (769)
                        .|.  ++|+|. ++.|+..++|.+++|+  |.|+|.+||.|+|..|...  ....|+.    +-.|+..+.|.-....
T Consensus       821 G~~c~--dvDeC~-psrChp~A~Cyntpgs--fsC~C~pGy~GDGf~CVP~~~~~T~C~~er~hpl~chg~t~~~~~~Dp  895 (1289)
T KOG1214|consen  821 GHQCT--DVDECS-PSRCHPAATCYNTPGS--FSCRCQPGYYGDGFQCVPDTSSLTPCEQERFHPLQCHGSTGFCWCVDP  895 (1289)
T ss_pred             ccccc--cccccC-ccccCCCceEecCCCc--ceeecccCccCCCceecCCCccCCccccccccceeeccccceeEeeCC
Confidence              666  689998 8899999999999987  9999999999999999741  1234541    1236554433332223


Q ss_pred             CceEEecCCCCCC
Q psy9686         713 KQITCLCLKGFEG  725 (769)
Q Consensus       713 ~~y~C~C~~GytG  725 (769)
                      ++|.|.|.++-.|
T Consensus       896 ~~~e~p~~~~ppG  908 (1289)
T KOG1214|consen  896 DGHEVPGTQTPPG  908 (1289)
T ss_pred             CcccCCCCCCCCC
Confidence            4488888766655

>KOG1219|consensus

Probab=99.49  E-value=3.5e-14  Score=172.87  Aligned_cols=120  Identities=28%  Similarity=0.662  Sum_probs=102.3

Q ss_pred             CCCcccc-CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCC
Q psy9686         509 KPGAAAL-GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRG  587 (769)
Q Consensus       509 ~~gc~di-deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g  587 (769)
                      .+||... +.|..+||+|+|+|+..+++  +|.|.|++.|+|+.||.                   ....|.++||.++ 
T Consensus      3857 ~pgC~l~~d~C~~npCqhgG~C~~~~~g--gy~CkCpsqysG~~CEi-------------------~~epC~snPC~~G- 3914 (4289)
T KOG1219|consen 3857 QPGCSLLTDPCNDNPCQHGGTCISQPKG--GYKCKCPSQYSGNHCEI-------------------DLEPCASNPCLTG- 3914 (4289)
T ss_pred             cccccccccccccCcccCCCEecCCCCC--ceEEeCcccccCccccc-------------------ccccccCCCCCCC-
Confidence            3455544 89999999999999999886  79999999999999943                   2344578888554 


Q ss_pred             CcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCC
Q psy9686         588 QGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPG  667 (769)
Q Consensus       588 ~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~G  667 (769)
                                                      |+|+...+.|.|.|+.||+|..|+...+++|+ .++|.++|.|++..|
T Consensus      3915 --------------------------------gtCip~~n~f~CnC~~gyTG~~Ce~~Gi~eCs-~n~C~~gg~C~n~~g 3961 (4289)
T KOG1219|consen 3915 --------------------------------GTCIPFYNGFLCNCPNGYTGKRCEARGISECS-KNVCGTGGQCINIPG 3961 (4289)
T ss_pred             --------------------------------CEEEecCCCeeEeCCCCccCceeecccccccc-cccccCCceeeccCC
Confidence                                            55677778899999999999999986689998 899999999999999


Q ss_pred             CCceEeecCCCCeecCCCcc
Q psy9686         668 DKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       668 s~~y~C~C~~Gftg~G~~C~  687 (769)
                      +  |.|.|.+||.  |.+|.
T Consensus      3962 s--f~CncT~g~~--gr~c~ 3977 (4289)
T KOG1219|consen 3962 S--FHCNCTPGIL--GRTCC 3977 (4289)
T ss_pred             c--eEeccChhHh--cccCc
Confidence            8  9999999999  77775

>KOG1219|consensus

Probab=99.43  E-value=1.8e-13  Score=166.98  Aligned_cols=112  Identities=23%  Similarity=0.548  Sum_probs=102.0

Q ss_pred             eeeccccccCCCccccCC-CCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcc
Q psy9686         609 VMVQYYLQQNISPLKDGN-LSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       609 ~~~~~~~c~ngg~C~n~~-gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~  687 (769)
                      ..+..+.|+++|+|...+ +.|.|.|++.|+|..|+.+ +.+|. ++||..+++|+...++  |.|.|+.||+  |.+|+
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~-~epC~-snPC~~GgtCip~~n~--f~CnC~~gyT--G~~Ce 3938 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEID-LEPCA-SNPCLTGGTCIPFYNG--FLCNCPNGYT--GKRCE 3938 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccc-ccccc-CCCCCCCCEEEecCCC--eeEeCCCCcc--Cceee
Confidence            456677899999999865 6699999999999999985 88998 9999999999998876  9999999999  99999


Q ss_pred             ccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       688 ~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      .+-+++|. .++|.++|+|++.+|+  |.|.|.+||.|..|.
T Consensus      3939 ~~Gi~eCs-~n~C~~gg~C~n~~gs--f~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3939 ARGISECS-KNVCGTGGQCINIPGS--FHCNCTPGILGRTCC 3977 (4289)
T ss_pred             cccccccc-cccccCCceeeccCCc--eEeccChhHhcccCc
Confidence            85589995 9999999999999998  999999999999995

>KOG1214|consensus

Probab=99.30  E-value=9e-12  Score=142.87  Aligned_cols=148  Identities=25%  Similarity=0.590  Sum_probs=112.9

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCc--CCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQ--GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITP  597 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~Gft--G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~  597 (769)
                      ++-|..+..|...++.  .|+|.|..||.  |++|.++++|+.                  ....|              
T Consensus       699 sh~cdt~a~C~pg~~~--~~tcecs~g~~gdgr~c~d~~eca~------------------~~~~C--------------  744 (1289)
T KOG1214|consen  699 SHMCDTTARCHPGTGV--DYTCECSSGYQGDGRNCVDENECAT------------------GFHRC--------------  744 (1289)
T ss_pred             CcccCCCccccCCCCc--ceEEEEeeccCCCCCCCCChhhhcc------------------CCCCC--------------
Confidence            4457777788877664  79999999996  567988888753                  12223              


Q ss_pred             ccccccccccceeeccccccCCCccccCCCCcccccCCCCC----CCccccc----ccccccc-CCCCCCCCe--EeeCC
Q psy9686         598 VYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT----GEYCQFE----NSAACVT-LNPCQNNAT--CVASP  666 (769)
Q Consensus       598 gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~----G~~Ce~~----~ideC~~-~~pC~n~gt--Cvnt~  666 (769)
                                         ..++.|++.+++|.|.|..||.    +-+|-..    .++.|.. .+.|...+.  |+.. 
T Consensus       745 -------------------Gp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~h-  804 (1289)
T KOG1214|consen  745 -------------------GPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHH-  804 (1289)
T ss_pred             -------------------CCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEec-
Confidence                               3456789999999999999984    3355421    2456664 466776654  4444 


Q ss_pred             CCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         667 GDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       667 Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                      |.+.|.|.|.|||.|+|..|.  ++|+|. ++.|+..+.|++++|+  +.|+|.+||.|.
T Consensus       805 Ggs~y~C~CLPGfsGDG~~c~--dvDeC~-psrChp~A~Cyntpgs--fsC~C~pGy~GD  859 (1289)
T KOG1214|consen  805 GGSTYSCACLPGFSGDGHQCT--DVDECS-PSRCHPAATCYNTPGS--FSCRCQPGYYGD  859 (1289)
T ss_pred             CCceEEEeecCCccCCccccc--cccccC-ccccCCCceEecCCCc--ceeecccCccCC
Confidence            334799999999999999998  789996 8999999999999988  999999999854

>KOG4289|consensus

Probab=99.28  E-value=9.1e-12  Score=148.16  Aligned_cols=109  Identities=31%  Similarity=0.641  Sum_probs=85.8

Q ss_pred             cCCCCCCCCCCCcEEeeCC-------------------CCccceEeeCCCCCcCCCC-cccccchhccccCceeeeeeee
Q psy9686         515 LGGCAGRPCRNNGTCTPVS-------------------GGVVNFTCTCPSGGQGQSG-LEITPVYLWLMKLKTLVMVQYY  574 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~-------------------gs~~~y~C~C~~GftG~~C-edideC~~~~~~~~~~~~~~~~  574 (769)
                      -+.|...||.|...|+...                   ..+.++.|+||+||+|..| ++||+|+               
T Consensus      1179 DniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCY--------------- 1243 (2531)
T KOG4289|consen 1179 DNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCY--------------- 1243 (2531)
T ss_pred             CchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhh---------------
Confidence            4679999999999896421                   0124599999999999999 5678875               


Q ss_pred             cccCCCCCCCCCCCcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCcccccc-ccccccC
Q psy9686         575 FRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFEN-SAACVTL  653 (769)
Q Consensus       575 ~~~Cs~~pC~~~g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~-ideC~~~  653 (769)
                           +.||+                                 +++.|....|+|+|.|.+||+|++|+.+. .-.|. +
T Consensus      1244 -----s~pC~---------------------------------nng~C~srEggYtCeCrpg~tGehCEvs~~agrCv-p 1284 (2531)
T KOG4289|consen 1244 -----SGPCG---------------------------------NNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCV-P 1284 (2531)
T ss_pred             -----cCCCC---------------------------------CCCceEEecCceeEEecCCccccceeeecccCccc-c
Confidence                 57774                                 44567777899999999999999999541 12476 7


Q ss_pred             CCCCCCCeEeeCCCCCceEeecCCC
Q psy9686         654 NPCQNNATCVASPGDKQITCLCLKG  678 (769)
Q Consensus       654 ~pC~n~gtCvnt~Gs~~y~C~C~~G  678 (769)
                      ..|.++++|++...+ +|.|.|+.|
T Consensus      1285 GvC~nggtC~~~~ng-gf~c~Cp~g 1308 (2531)
T KOG4289|consen 1285 GVCKNGGTCVNLLNG-GFCCHCPYG 1308 (2531)
T ss_pred             ceecCCCEEeecCCC-ceeccCCCc
Confidence            889999999987643 699999987

>KOG1217|consensus

Probab=99.20  E-value=2.5e-10  Score=128.22  Aligned_cols=204  Identities=25%  Similarity=0.494  Sum_probs=141.6

Q ss_pred             CCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc---ccchhccccCceeeeeeeecccCCCCCCCCCCCcC
Q psy9686         516 GGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI---TPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQ  590 (769)
Q Consensus       516 deC~--s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi---deC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~  590 (769)
                      ++|.  ..+|.+++.|.+..++   |.|.|++||.+..|+..   ..|..          .    ..             
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~---~~C~c~~~~~~~~~~~~~~~~~c~~----------~----~~-------------  219 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGS---YLCSCPPGYTGSTCETTGNGGTCVD----------S----VA-------------  219 (487)
T ss_pred             cccccCCCCcCCCcccccCCCC---eeEeCCCCccCCcCcCCCCCceEec----------c----ee-------------
Confidence            5786  4569999999999887   99999999999998542   11110          0    00             


Q ss_pred             CCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCc---cccccccccccCCCCCCCCeEeeCCC
Q psy9686         591 SGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEY---CQFENSAACVTLNPCQNNATCVASPG  667 (769)
Q Consensus       591 ~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~---Ce~~~ideC~~~~pC~n~gtCvnt~G  667 (769)
                        ..+.+++.+......   .......+ +.|.+..++|.|.|++||.+..   |.  ++++|....+|.++++|++..+
T Consensus       220 --~~~~~g~~~~~c~~~---~~~~~~~~-~~c~~~~~~~~C~~~~g~~~~~~~~~~--~~~~C~~~~~c~~~~~C~~~~~  291 (487)
T KOG1217|consen  220 --CSCPPGARGPECEVS---IVECASGD-GTCVNTVGSYTCRCPEGYTGDACVTCV--DVDSCALIASCPNGGTCVNVPG  291 (487)
T ss_pred             --ccCCCCCCCCCcccc---cccccCCC-CcccccCCceeeeCCCCccccccceee--eccccCCCCccCCCCeeecCCC
Confidence              112222221111100   00000113 7899999999999999999986   33  5788983324999999999987


Q ss_pred             CCceEeecCCCCeecCCCc-cccCCcccc---CCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCCCCC-CC
Q psy9686         668 DKQITCLCLKGGTVSSEYC-QFENSAACV---TLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPS-ED  742 (769)
Q Consensus       668 s~~y~C~C~~Gftg~G~~C-~~~~ideC~---s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~npC-~~  742 (769)
                      .  |.|.|++||+  |..| ...+.++|.   ...+|.+++.|........+.|.|..||.|..|+...++|...++ .+
T Consensus       292 ~--~~C~C~~g~~--g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~~~~~C~~~~~~~~  367 (487)
T KOG1217|consen  292 S--YRCTCPPGFT--GRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGRRCEDSNDECASSPCCPG  367 (487)
T ss_pred             c--ceeeCCCCCC--CCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCCCCCCCCccccCCccccCCccccC
Confidence            6  9999999999  6665 221446774   256799988994333333488999999999999854458998866 78


Q ss_pred             Cceee-CCCCccccCCC-Ccc
Q psy9686         743 ETSVD-LQLGSQANSYN-WAH  761 (769)
Q Consensus       743 GtC~n-~~ggy~C~~~~-w~~  761 (769)
                      ++|++ ..++|.|.... +.+
T Consensus       368 ~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  368 GTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             CEeccCCCCCeEecCCCcccc
Confidence            99999 79999998763 443

>KOG1217|consensus

Probab=99.03  E-value=3.3e-09  Score=119.18  Aligned_cols=228  Identities=24%  Similarity=0.390  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEI  595 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C  595 (769)
                      ..|...+....+.|......   |.|.|++||.|..|+...+|...    ..   .......|...+.   ........|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~---~~c~c~~g~~~~~~~~~~~C~~~----~~---~~~~~~~c~~~~~---~~~~~~c~C  156 (487)
T KOG1217|consen   90 PPCRSPCLLLCGECVDCVGS---YECTCPPGYQGTPCEGECECVTG----PG---VCCIDGSCSNGPG---SVGPFRCSC  156 (487)
T ss_pred             ccccCCcccCCccccCCCCC---ceeeCCCccccCcCCcceeecCC----CC---CeeCchhhcCCCC---CCCceeeee
Confidence            34555555556666666665   99999999999988443234320    00   0011122222222   112222467


Q ss_pred             ccccccccccccceeec--cccccCCCccccCCCCcccccCCCCCCCccccc-------c-----------ccccc-cCC
Q psy9686         596 TPVYLWLMKMKTLVMVQ--YYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFE-------N-----------SAACV-TLN  654 (769)
Q Consensus       596 ~~gy~~~~~~~~C~~~~--~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~-------~-----------ideC~-~~~  654 (769)
                      ..+|.+.........+.  ...|.+++.|.+..++|.|.|+++|.+..|+..       +           .+.|. ...
T Consensus       157 ~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~  236 (487)
T KOG1217|consen  157 TEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIV  236 (487)
T ss_pred             CCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccc
Confidence            78887765553322222  234888999999999999999999999887732       0           11222 122


Q ss_pred             CCCCC-CeEeeCCCCCceEeecCCCCeecC-CCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCC--CC
Q psy9686         655 PCQNN-ATCVASPGDKQITCLCLKGGTVSS-EYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHR--EL  730 (769)
Q Consensus       655 pC~n~-gtCvnt~Gs~~y~C~C~~Gftg~G-~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~C--e~  730 (769)
                      .|..+ ++|++..++  |.|.|++||++.. ..|.  +++.|....+|.++++|++..+.  |.|.|++||+|..|  ..
T Consensus       237 ~~~~~~~~c~~~~~~--~~C~~~~g~~~~~~~~~~--~~~~C~~~~~c~~~~~C~~~~~~--~~C~C~~g~~g~~~~~~~  310 (487)
T KOG1217|consen  237 ECASGDGTCVNTVGS--YTCRCPEGYTGDACVTCV--DVDSCALIASCPNGGTCVNVPGS--YRCTCPPGFTGRLCTECV  310 (487)
T ss_pred             cccCCCCcccccCCc--eeeeCCCCccccccceee--eccccCCCCccCCCCeeecCCCc--ceeeCCCCCCCCCCcccc
Confidence            34433 889988877  9999999999443 2344  67889733249999999999876  99999999999998  23


Q ss_pred             CCCCCC----CCCC-CCCce--eeCCCCccccCCC-Cccc
Q psy9686         731 PVESVD----EPPS-EDETS--VDLQLGSQANSYN-WAHM  762 (769)
Q Consensus       731 dideC~----~npC-~~GtC--~n~~ggy~C~~~~-w~~~  762 (769)
                      +.++|.    ..+| ++++|  .+..+.+.|...+ |.++
T Consensus       311 ~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~  350 (487)
T KOG1217|consen  311 DVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGR  350 (487)
T ss_pred             ccccccccccCCcCCCCcccccCCCCCCCCcCCCCCCCCC
Confidence            456784    4566 45578  4555567777664 3443

>KOG4289|consensus

Probab=98.99  E-value=4.7e-10  Score=134.03  Aligned_cols=100  Identities=36%  Similarity=0.766  Sum_probs=85.8

Q ss_pred             ccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcccc-CCccccCCCCCC
Q psy9686         623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFE-NSAACVTLNPCQ  701 (769)
Q Consensus       623 ~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~-~ideC~s~~pC~  701 (769)
                      ++..+++.|.|++||+|+.|+.. +|.|- +.||.++++|....|+  |+|.|.+||+  |++|+.. ..-.|. +..|.
T Consensus      1216 i~pvnglrCrCPpGFTgd~CeTe-iDlCY-s~pC~nng~C~srEgg--YtCeCrpg~t--GehCEvs~~agrCv-pGvC~ 1288 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFTGDYCETE-IDLCY-SGPCGNNGRCRSREGG--YTCECRPGFT--GEHCEVSARAGRCV-PGVCK 1288 (2531)
T ss_pred             ccccCceeEeCCCCCCcccccch-hHhhh-cCCCCCCCceEEecCc--eeEEecCCcc--ccceeeecccCccc-cceec
Confidence            45567899999999999999985 99998 8999999999999887  9999999999  9999852 123575 88899


Q ss_pred             CCCEEecCCCCCceEEecCCC-CCCCCCCC
Q psy9686         702 NNATCVASPGDKQITCLCLKG-FEGPHREL  730 (769)
Q Consensus       702 ngg~Cvnt~Gs~~y~C~C~~G-ytG~~Ce~  730 (769)
                      |+++|++... +++.|+|+.| |++++|+.
T Consensus      1289 nggtC~~~~n-ggf~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1289 NGGTCVNLLN-GGFCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             CCCEEeecCC-CceeccCCCcccCCCceEE
Confidence            9999998754 3599999998 67899985

>KOG1225|consensus

Probab=98.77  E-value=2.6e-08  Score=113.94  Aligned_cols=158  Identities=24%  Similarity=0.423  Sum_probs=109.4

Q ss_pred             eEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCC-cccccccccccccc-cceeeccccc
Q psy9686         539 FTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSG-LEITPVYLWLMKMK-TLVMVQYYLQ  616 (769)
Q Consensus       539 y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~-~~C~~gy~~~~~~~-~C~~~~~~~c  616 (769)
                      +.|.|+.+|.|..|+. -.|                     +.-|...+.|.++ +.|.+||.+..+.. .|..   . |
T Consensus       234 ~ic~c~~~~~g~~c~~-~~C---------------------~~~c~~~g~c~~G~CIC~~Gf~G~dC~e~~Cp~---~-c  287 (525)
T KOG1225|consen  234 GICECPEGYFGPLCST-IYC---------------------PGGCTGRGQCVEGRCICPPGFTGDDCDELVCPV---D-C  287 (525)
T ss_pred             ceeecCCceeCCcccc-ccC---------------------CCCCcccceEeCCeEeCCCCCcCCCCCcccCCc---c-c
Confidence            5899999999999963 333                     4455556777776 57899987744332 3332   2 6


Q ss_pred             cCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccC
Q psy9686         617 QNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVT  696 (769)
Q Consensus       617 ~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s  696 (769)
                      +.++.|++.    .|.|.+||.|+.|+.   ..|  +..|.++|.|++  |    +|.|.+||+  |..|..        
T Consensus       288 s~~g~~~~g----~CiC~~g~~G~dCs~---~~c--padC~g~G~Ci~--G----~C~C~~Gy~--G~~C~~--------  342 (525)
T KOG1225|consen  288 SGGGVCVDG----ECICNPGYSGKDCSI---RRC--PADCSGHGKCID--G----ECLCDEGYT--GELCIQ--------  342 (525)
T ss_pred             CCCceecCC----EeecCCCcccccccc---ccC--CccCCCCCcccC--C----ceEeCCCCc--CCcccc--------
Confidence            677777766    899999999999984   357  678999999983  3    599999999  888874        


Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCC--CCCCCCCceeeCCCCccccCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVD--EPPSEDETSVDLQLGSQANSY  757 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~--~npC~~GtC~n~~ggy~C~~~  757 (769)
                      . .|.+++.|++      - |.|..||.|.+  ...+.+.  ..+...+.|+...+...+..+
T Consensus       343 ~-~C~~~g~cv~------g-C~C~~Gw~G~d--~~~~~~~~~~~cs~~~~~~~~~~~~~~~~~  395 (525)
T KOG1225|consen  343 R-ACSGGGQCVN------G-CKCKKGWRGPD--VADPSLLLITECSPPSLCIAGVGRRRVTHC  395 (525)
T ss_pred             c-ccCCCceecc------C-ceeccCccCCC--cCCchhhcccccCCCceeeccccccccccc
Confidence            1 3788888886      2 99999999998  2222222  122345566666644444443

>KOG1225|consensus

Probab=98.47  E-value=6.1e-07  Score=102.86  Aligned_cols=88  Identities=27%  Similarity=0.722  Sum_probs=72.2

Q ss_pred             ccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCcccc
Q psy9686         616 QQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACV  695 (769)
Q Consensus       616 c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~  695 (769)
                      |.+.+.|+++    +|.|++||+|.+|+.   -.|  +..|+.++.|++.      .|.|.+||+  |+.|+.+   .| 
T Consensus       256 c~~~g~c~~G----~CIC~~Gf~G~dC~e---~~C--p~~cs~~g~~~~g------~CiC~~g~~--G~dCs~~---~c-  314 (525)
T KOG1225|consen  256 CTGRGQCVEG----RCICPPGFTGDDCDE---LVC--PVDCSGGGVCVDG------ECICNPGYS--GKDCSIR---RC-  314 (525)
T ss_pred             CcccceEeCC----eEeCCCCCcCCCCCc---ccC--CcccCCCceecCC------EeecCCCcc--ccccccc---cC-
Confidence            3444678777    899999999999984   358  4559888888764      699999999  9999853   47 


Q ss_pred             CCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCC
Q psy9686         696 TLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELP  731 (769)
Q Consensus       696 s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~d  731 (769)
                       +.+|.++|.|++  |    +|.|.+||+|..|+..
T Consensus       315 -padC~g~G~Ci~--G----~C~C~~Gy~G~~C~~~  343 (525)
T KOG1225|consen  315 -PADCSGHGKCID--G----ECLCDEGYTGELCIQR  343 (525)
T ss_pred             -CccCCCCCcccC--C----ceEeCCCCcCCccccc
Confidence             688999999993  3    8999999999999865

>KOG1226|consensus

Probab=98.28  E-value=4.7e-06  Score=97.44  Aligned_cols=101  Identities=24%  Similarity=0.613  Sum_probs=67.8

Q ss_pred             ccccCCCCC----CCcccccccccccc--CCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcccc-CCccccCC--CCC
Q psy9686         630 YCNCTEDFT----GEYCQFENSAACVT--LNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFE-NSAACVTL--NPC  700 (769)
Q Consensus       630 ~C~C~~Gy~----G~~Ce~~~ideC~~--~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~-~ideC~s~--~pC  700 (769)
                      .|.|.+...    |.+|+.++ -.|..  ...|..+|+|.-.      +|+|.+||+  |..|+.. +.+.|.++  ..|
T Consensus       526 qC~C~~~~~~~i~G~fCECDn-fsC~r~~g~lC~g~G~C~CG------~CvC~~Gwt--G~~C~C~~std~C~~~~G~iC  596 (783)
T KOG1226|consen  526 QCVCHKPDNGKIYGKFCECDN-FSCERHKGVLCGGHGRCECG------RCVCNPGWT--GSACNCPLSTDTCESSDGQIC  596 (783)
T ss_pred             ceEecCCCCCceeeeeeeccC-cccccccCcccCCCCeEeCC------cEEcCCCCc--cCCCCCCCCCccccCCCCcee
Confidence            577776665    88999753 24641  2348888999764      599999999  6666532 56678643  248


Q ss_pred             CCCCEEecCCCCCceEEecCCC-CCCCCCCCCCCCCCCCCCCCCcee
Q psy9686         701 QNNATCVASPGDKQITCLCLKG-FEGPHRELPVESVDEPPSEDETSV  746 (769)
Q Consensus       701 ~ngg~Cvnt~Gs~~y~C~C~~G-ytG~~Ce~dideC~~npC~~GtC~  746 (769)
                      ...|+|.-.      +|+|... |.|..||... .|...+-.+..|+
T Consensus       597 SGrG~C~Cg------~C~C~~~~~sG~~CE~cp-tc~~~C~~~~~Cv  636 (783)
T KOG1226|consen  597 SGRGTCECG------RCKCTDPPYSGEFCEKCP-TCPDPCAENKSCV  636 (783)
T ss_pred             CCCceeeCC------ceEcCCCCcCcchhhcCC-CCCCcccccccch
Confidence            888888864      7999876 9999998533 3443322444453

>KOG4260|consensus

Probab=98.21  E-value=1.4e-06  Score=90.61  Aligned_cols=150  Identities=22%  Similarity=0.468  Sum_probs=92.1

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccccccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVY  599 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~gy  599 (769)
                      ..||..+|.|.-.....+.-.|.|.+||+|..|.+-+.=+               +.   +..-..+             
T Consensus       149 er~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~ey---------------fe---s~Rne~~-------------  197 (350)
T KOG4260|consen  149 ERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEY---------------FE---SSRNEQH-------------  197 (350)
T ss_pred             cCCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHH---------------HH---hhccccc-------------
Confidence            4578888999754333234689999999999984311100               00   0000000             


Q ss_pred             ccccccccceeeccccccCCCccccCCCCccc-ccCCCCCCC--cccccccccccc-CCCCCCCCeEeeCCCCCceEeec
Q psy9686         600 LWLMKMKTLVMVQYYLQQNISPLKDGNLSFYC-NCTEDFTGE--YCQFENSAACVT-LNPCQNNATCVASPGDKQITCLC  675 (769)
Q Consensus       600 ~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C-~C~~Gy~G~--~Ce~~~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C  675 (769)
                            ..|..+.+.+   .+.|... ++-.| .|..||...  .|-  |+|+|.. +.+|.....|+|+.|+  |.|.+
T Consensus       198 ------lvCt~Ch~~C---~~~Csg~-~~k~C~kCkkGW~lde~gCv--DvnEC~~ep~~c~~~qfCvNteGS--f~C~d  263 (350)
T KOG4260|consen  198 ------LVCTACHEGC---LGVCSGE-SSKGCSKCKKGWKLDEEGCV--DVNECQNEPAPCKAHQFCVNTEGS--FKCED  263 (350)
T ss_pred             ------chhhhhhhhh---hcccCCC-CCCChhhhcccceecccccc--cHHHHhcCCCCCChhheeecCCCc--eEecc
Confidence                  1111111100   1234332 23345 599999754  666  8999983 6789988899999988  99999


Q ss_pred             CCCCeecCCCccccCCccccC-CCCCC-CCCEEecCCCCCceEEecCCCCC
Q psy9686         676 LKGGTVSSEYCQFENSAACVT-LNPCQ-NNATCVASPGDKQITCLCLKGFE  724 (769)
Q Consensus       676 ~~Gftg~G~~C~~~~ideC~s-~~pC~-ngg~Cvnt~Gs~~y~C~C~~Gyt  724 (769)
                      .+||.+ |       +|+|.. ...|. .+..|.++++.  |+|.|..|+.
T Consensus       264 k~Gy~~-g-------~d~C~~~~d~~~~kn~~c~ni~~~--~r~v~f~~~~  304 (350)
T KOG4260|consen  264 KEGYKK-G-------VDECQFCADVCASKNRPCMNIDGQ--YRCVCFSGLI  304 (350)
T ss_pred             cccccC-C-------hHHhhhhhhhcccCCCCcccCCcc--EEEEecccce
Confidence            999974 2       334430 13343 23468888877  9999999873

>KOG4260|consensus

Probab=98.20  E-value=2.3e-06  Score=89.03  Aligned_cols=120  Identities=19%  Similarity=0.466  Sum_probs=82.5

Q ss_pred             CCCcccccCCCCCCCcccccccccccc-C----C---CCCC--CCeEeeCCCCCceEe-ecCCCCeecCCCccccCCccc
Q psy9686         626 NLSFYCNCTEDFTGEYCQFENSAACVT-L----N---PCQN--NATCVASPGDKQITC-LCLKGGTVSSEYCQFENSAAC  694 (769)
Q Consensus       626 ~gsy~C~C~~Gy~G~~Ce~~~ideC~~-~----~---pC~n--~gtCvnt~Gs~~y~C-~C~~Gftg~G~~C~~~~ideC  694 (769)
                      .|+-.|.|.+||.|+.|..-.+..=.+ .    .   .|+.  .+.|.... +  -.| .|..||..+-..|.  |+|+|
T Consensus       165 ~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Csg~~-~--k~C~kCkkGW~lde~gCv--DvnEC  239 (350)
T KOG4260|consen  165 EGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCSGES-S--KGCSKCKKGWKLDEEGCV--DVNEC  239 (350)
T ss_pred             CCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhcccCCCC-C--CChhhhcccceecccccc--cHHHH
Confidence            456689999999999887311100000 0    0   1222  12453321 1  345 59999998877888  89999


Q ss_pred             cC-CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCC--CCC--CCCceeeCCCCccccCC
Q psy9686         695 VT-LNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDE--PPS--EDETSVDLQLGSQANSY  757 (769)
Q Consensus       695 ~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~--npC--~~GtC~n~~ggy~C~~~  757 (769)
                      .. +.+|.....|+|+.||  |.|.+++||.+.     +|+|.-  .-|  .++.|-|+.++|+|-.+
T Consensus       240 ~~ep~~c~~~qfCvNteGS--f~C~dk~Gy~~g-----~d~C~~~~d~~~~kn~~c~ni~~~~r~v~f  300 (350)
T KOG4260|consen  240 QNEPAPCKAHQFCVNTEGS--FKCEDKEGYKKG-----VDECQFCADVCASKNRPCMNIDGQYRCVCF  300 (350)
T ss_pred             hcCCCCCChhheeecCCCc--eEecccccccCC-----hHHhhhhhhhcccCCCCcccCCccEEEEec
Confidence            73 5679888899999998  999999999873     455554  223  57889999999998765

>KOG0994|consensus

Probab=97.88  E-value=4.6e-05  Score=91.40  Aligned_cols=208  Identities=16%  Similarity=0.293  Sum_probs=113.4

Q ss_pred             eccccccccccCCCccccCCCCCCCCCCC--------cEEeeCCCCccceEeeCCCCCcCCCCcccccchhc----cccC
Q psy9686         498 SQELFLSSALKKPGAAALGGCAGRPCRNN--------GTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLW----LMKL  565 (769)
Q Consensus       498 ~~~~~~~~~~~~~gc~dideC~s~PC~ng--------GtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~----~~~~  565 (769)
                      |..+|++.-.-..+    ..|.+-||..+        -.|...+.. ....|.|.+||+|.+|+.   |+.+    ...+
T Consensus       890 Cl~GyyGdP~lg~g----~~CrPCpCP~gp~Sg~~~A~sC~~d~~t-~~ivC~C~~GY~G~RCe~---CA~~~fGnP~~G  961 (1758)
T KOG0994|consen  890 CLDGYYGDPRLGSG----IGCRPCPCPDGPASGRQHADSCYLDTRT-QQIVCHCQEGYSGSRCEI---CADNHFGNPSEG  961 (1758)
T ss_pred             hhccccCCcccCCC----CCCCCCCCCCCCccchhccccccccccc-cceeeecccCccccchhh---hcccccCCcccC
Confidence            55566554333322    34555555443        246544332 457899999999999953   5544    3347


Q ss_pred             ceeeeee--eecccCCCCCCCC-CCCcCC---------CcccccccccccccccceeeccccccCCCccccCCCCccccc
Q psy9686         566 KTLVMVQ--YYFRRKSTSPHKS-RGQGQS---------GLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNC  633 (769)
Q Consensus       566 ~~~~~~~--~~~~~Cs~~pC~~-~g~C~~---------~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C  633 (769)
                      ++|..|+  ..++.=.+..|.. .|.|..         +--|.+||.+......|..+.-+.-.-+.+|.=..-+-.|-|
T Consensus       962 GtCq~CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~~~~CDr~tGQCpC 1041 (1758)
T KOG0994|consen  962 GTCQKCECSNNIDLYDPGACDVATGACLKCLYHTEGDHCEHCKDGFYGDALRQNCQRCVCNFLGTNSTCHCDRFTGQCPC 1041 (1758)
T ss_pred             CccccccccCCcCccCCCccchhhchhhhhhhcccccchhhccccchhHHHHhhhhhheccccccCCccccccccCcCCC
Confidence            8885443  3444444555543 244433         236899998876666665544333222222222223347888


Q ss_pred             CCCCCCCcccccccccccc------------CCCCCC--CCeEeeCCCCCceEeecCCCCeecCCCcccc------CCc-
Q psy9686         634 TEDFTGEYCQFENSAACVT------------LNPCQN--NATCVASPGDKQITCLCLKGGTVSSEYCQFE------NSA-  692 (769)
Q Consensus       634 ~~Gy~G~~Ce~~~ideC~~------------~~pC~n--~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~------~id-  692 (769)
                      .+...|..|+.     |+.            +-.|..  +-+|....|    .|.|.|||-  |.+|..-      +.+ 
T Consensus      1042 lpNv~G~~CDq-----CA~N~w~laSG~GCe~C~Cd~~~~pqCN~ftG----QCqCkpGfG--GR~C~qCqel~WGdP~~ 1110 (1758)
T KOG0994|consen 1042 LPNVQGVRCDQ-----CAENHWNLASGEGCEPCNCDPIGGPQCNEFTG----QCQCKPGFG--GRTCSQCQELYWGDPNE 1110 (1758)
T ss_pred             Ccccccccccc-----cccchhccccCCCCCccCCCccCCcccccccc----ceeccCCCC--CcchhHHHHhhcCCCCC
Confidence            88888887762     431            112222  225544444    599999997  7777620      000 


Q ss_pred             cccCCCCCCCCC----EEecCCCCCceEEecCCCCCCCCCC
Q psy9686         693 ACVTLNPCQNNA----TCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       693 eC~s~~pC~ngg----~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      .|. .-.|...|    +|....|    +|.|.+|-.|..|.
T Consensus      1111 ~C~-aCdCd~rG~~tpQCdr~tG----~C~C~~Gv~G~rCd 1146 (1758)
T KOG0994|consen 1111 KCR-ACDCDPRGIETPQCDRATG----RCVCRPGVGGPRCD 1146 (1758)
T ss_pred             Cce-ecCCCCCCCCCCCccccCC----ceeecCCCCCcchh
Confidence            121 11233222    3444433    78888888888884

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.56  E-value=4.1e-05  Score=55.55  Aligned_cols=31  Identities=45%  Similarity=1.241  Sum_probs=27.4

Q ss_pred             CCCCCCCCCcEEeeCC-CCccceEeeCCCCCcCCC
Q psy9686         518 CAGRPCRNNGTCTPVS-GGVVNFTCTCPSGGQGQS  551 (769)
Q Consensus       518 C~s~PC~ngGtCvn~~-gs~~~y~C~C~~GftG~~  551 (769)
                      |.++||.|+|+|++.. +   .|.|.|++||+|++
T Consensus         1 C~~~~C~n~g~C~~~~~~---~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGG---GYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTTSSTTTEEEEEESTS---EEEEEEBTTEESTT
T ss_pred             CCCCcCCCCeEEEeCCCC---CEEeECCCCCccCC
Confidence            6678999999999988 4   49999999999974

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.47  E-value=0.00016  Score=53.66  Aligned_cols=36  Identities=39%  Similarity=1.039  Sum_probs=32.1

Q ss_pred             ccCCCCC-CCCCCCcEEeeCCCCccceEeeCCCCCc-CCCC
Q psy9686         514 ALGGCAG-RPCRNNGTCTPVSGGVVNFTCTCPSGGQ-GQSG  552 (769)
Q Consensus       514 dideC~s-~PC~ngGtCvn~~gs~~~y~C~C~~Gft-G~~C  552 (769)
                      ++++|.. .||.++++|++..++   |.|.|++||. |..|
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~---~~C~C~~g~~~g~~C   38 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGS---YRCECPPGYTDGRNC   38 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCC---eEeECCCCCccCCcC
Confidence            3678987 799999999999887   9999999999 8877

>KOG1226|consensus

Probab=97.38  E-value=0.00047  Score=81.16  Aligned_cols=95  Identities=21%  Similarity=0.651  Sum_probs=66.6

Q ss_pred             ccccCCCCCCCcccccc--------cccccc---CCCCCCCCeEeeCCCCCceEeecCCCCee--cCCCccccCCccccC
Q psy9686         630 YCNCTEDFTGEYCQFEN--------SAACVT---LNPCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQFENSAACVT  696 (769)
Q Consensus       630 ~C~C~~Gy~G~~Ce~~~--------ideC~~---~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~~~~ideC~s  696 (769)
                      .|.|.+||.|+.|+...        .+.|..   .-+|...|.|+=.      +|.|.+...+  .|+.|+. +.-.|..
T Consensus       479 ~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG------qC~C~~~~~~~i~G~fCEC-DnfsC~r  551 (783)
T KOG1226|consen  479 QCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG------QCVCHKPDNGKIYGKFCEC-DNFSCER  551 (783)
T ss_pred             ceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC------ceEecCCCCCceeeeeeec-cCccccc
Confidence            67899999999998631        133431   2268888888764      5999876442  4888986 3335642


Q ss_pred             --CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC--CCCCCCC
Q psy9686         697 --LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL--PVESVDE  737 (769)
Q Consensus       697 --~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~--dideC~~  737 (769)
                        ...|..+|.|.-.      +|.|.+||+|..|+-  +.+.|.+
T Consensus       552 ~~g~lC~g~G~C~CG------~CvC~~GwtG~~C~C~~std~C~~  590 (783)
T KOG1226|consen  552 HKGVLCGGHGRCECG------RCVCNPGWTGSACNCPLSTDTCES  590 (783)
T ss_pred             ccCcccCCCCeEeCC------cEEcCCCCccCCCCCCCCCccccC
Confidence              2359888898764      899999999998763  4555665

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.24  E-value=0.00015  Score=52.67  Aligned_cols=30  Identities=43%  Similarity=0.953  Sum_probs=25.9

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPH  727 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~  727 (769)
                      +++|.|+|+|++.. .++|+|+|++||+|++
T Consensus         3 ~~~C~n~g~C~~~~-~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    3 SNPCQNGGTCIDLP-GGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTSSTTTEEEEEES-TSEEEEEEBTTEESTT
T ss_pred             CCcCCCCeEEEeCC-CCCEEeECCCCCccCC
Confidence            67999999999988 2349999999999974

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.24  E-value=0.00044  Score=51.20  Aligned_cols=36  Identities=42%  Similarity=0.906  Sum_probs=31.3

Q ss_pred             CccccCC-CCCCCCCEEecCCCCCceEEecCCCCC-CCCCC
Q psy9686         691 SAACVTL-NPCQNNATCVASPGDKQITCLCLKGFE-GPHRE  729 (769)
Q Consensus       691 ideC~s~-~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt-G~~Ce  729 (769)
                      +++|. . .+|.+++.|+++.++  |.|.|++||. |..|+
T Consensus         2 ~~~C~-~~~~C~~~~~C~~~~g~--~~C~C~~g~~~g~~C~   39 (39)
T smart00179        2 IDECA-SGNPCQNGGTCVNTVGS--YRCECPPGYTDGRNCE   39 (39)
T ss_pred             cccCc-CCCCcCCCCEeECCCCC--eEeECCCCCccCCcCC
Confidence            57785 4 789999999999887  9999999999 98884

>KOG0994|consensus

Probab=97.11  E-value=0.0013  Score=79.67  Aligned_cols=62  Identities=31%  Similarity=0.674  Sum_probs=39.5

Q ss_pred             eEe-ecCCCCeec-----CCCccccCCccccCCCCCCC--------CCEEecCCCCCceEEecCCCCCCCCCCCCCCCCC
Q psy9686         671 ITC-LCLKGGTVS-----SEYCQFENSAACVTLNPCQN--------NATCVASPGDKQITCLCLKGFEGPHRELPVESVD  736 (769)
Q Consensus       671 y~C-~C~~Gftg~-----G~~C~~~~ideC~s~~pC~n--------gg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~  736 (769)
                      +.| +|..||.|+     |..|.         +-||..        .-.|.-........|.|.+||+|.+|+.    |+
T Consensus       885 ~~CdrCl~GyyGdP~lg~g~~Cr---------PCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~----CA  951 (1758)
T KOG0994|consen  885 HSCDRCLDGYYGDPRLGSGIGCR---------PCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEI----CA  951 (1758)
T ss_pred             cchhhhhccccCCcccCCCCCCC---------CCCCCCCCccchhccccccccccccceeeecccCccccchhh----hc
Confidence            677 699999853     44444         223432        2245443333457899999999999974    55


Q ss_pred             C----CCCCCCce
Q psy9686         737 E----PPSEDETS  745 (769)
Q Consensus       737 ~----npC~~GtC  745 (769)
                      +    +|-++|+|
T Consensus       952 ~~~fGnP~~GGtC  964 (1758)
T KOG0994|consen  952 DNHFGNPSEGGTC  964 (1758)
T ss_pred             ccccCCcccCCcc
Confidence            4    56666665

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.06  E-value=0.00082  Score=49.03  Aligned_cols=35  Identities=40%  Similarity=1.086  Sum_probs=31.2

Q ss_pred             cCCCCC-CCCCCCcEEeeCCCCccceEeeCCCCCcCCCC
Q psy9686         515 LGGCAG-RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSG  552 (769)
Q Consensus       515 ideC~s-~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~C  552 (769)
                      +++|.. .+|.+++.|.+..++   |.|.|++||.|..|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~---~~C~C~~g~~g~~C   37 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGS---YRCSCPPGYTGRNC   37 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCC---eEeECCCCCcCCcC
Confidence            578877 799999999998887   99999999999877

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PRK15328 invasion protein IagB; Provisional

Probab=97.04  E-value=0.00012  Score=72.53  Aligned_cols=45  Identities=31%  Similarity=0.299  Sum_probs=37.3

Q ss_pred             cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccC
Q psy9686         294 RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCT  342 (769)
Q Consensus       294 ~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~  342 (769)
                      +|++-..|   ..|++.||+||+.|++. |.+|+.|+||+|||+.+|..
T Consensus        29 y~Idp~Ll---~AIa~~ES~f~p~avs~-n~~gs~d~GLMQIn~~~~~~   73 (160)
T PRK15328         29 FNIESELL---YAIAQQESAMKPGAIGH-NRDGSTDLGLMQINSFHMKR   73 (160)
T ss_pred             cCCCHHHH---HHHHHHHcCCCCCCEec-CCCCCcccChhhcCHHHHHH
Confidence            56665444   35999999999999985 67899999999999988753

>PRK13722 lytic transglycosylase; Provisional

Probab=96.97  E-value=0.00018  Score=71.72  Aligned_cols=44  Identities=23%  Similarity=0.192  Sum_probs=35.4

Q ss_pred             cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeecccccc
Q psy9686         294 RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWC  341 (769)
Q Consensus       294 ~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC  341 (769)
                      ++++-.-|.-   |+..||+||+.|++. |.+|+.|+||.|||+.++=
T Consensus        30 y~vdp~LL~A---Ii~~ES~fnp~Avs~-n~~gs~d~GLMQIn~~~~~   73 (169)
T PRK13722         30 YKIDPDLLRA---ISWKESRYRVNAIGI-NPVTGYGSGLMQVDSQHFN   73 (169)
T ss_pred             cCCCHHHHHH---HHHHHcCCCCCCeec-CCCCCeeecCCcccHHHHH
Confidence            5665544443   899999999999985 6789999999999997754

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=96.94  E-value=0.00051  Score=52.83  Aligned_cols=32  Identities=38%  Similarity=1.043  Sum_probs=28.5

Q ss_pred             ccCCCCC--CCCCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         514 ALGGCAG--RPCRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       514 dideC~s--~PC~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      |||||..  ++|..++.|+|+.|+   |.|.|++||.
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gs---y~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGS---YSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTE---EEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCC---EEeeCCCCcE
Confidence            6899964  469989999999998   9999999997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=96.87  E-value=0.00074  Score=51.94  Aligned_cols=33  Identities=30%  Similarity=0.733  Sum_probs=29.1

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCe
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGT  680 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gft  680 (769)
                      |||||.. .+.|..++.|+|+.|+  |+|.|++||.
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gs--y~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGS--YSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTE--EEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCC--EEeeCCCCcE
Confidence            4789984 5679989999999988  9999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.76  E-value=0.0021  Score=46.79  Aligned_cols=36  Identities=42%  Similarity=0.912  Sum_probs=30.5

Q ss_pred             CccccCC-CCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         691 SAACVTL-NPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       691 ideC~s~-~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      +++|. . .+|.+++.|++..++  |.|.|++||.|..|+
T Consensus         2 ~~~C~-~~~~C~~~~~C~~~~~~--~~C~C~~g~~g~~C~   38 (38)
T cd00054           2 IDECA-SGNPCQNGGTCVNTVGS--YRCSCPPGYTGRNCE   38 (38)
T ss_pred             cccCC-CCCCcCCCCEeECCCCC--eEeECCCCCcCCcCC
Confidence            46775 4 689988999999876  999999999998884

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PRK13888 conjugal transfer protein TrbN; Provisional

Probab=96.62  E-value=0.00056  Score=69.61  Aligned_cols=31  Identities=35%  Similarity=0.531  Sum_probs=28.1

Q ss_pred             eeccccCCCcccccCCCCCCCceeeeeeecccc
Q psy9686         307 IATKESNRNSNARSPKNGNGSRDHGIFQINDKY  339 (769)
Q Consensus       307 la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~  339 (769)
                      |+..||+ +..+++. |.|||.|+||+|||+.|
T Consensus        35 Ia~~ESg-~pgai~~-N~NGT~DvGlMQINS~h   65 (206)
T PRK13888         35 VAEKEGG-KPGQWVR-NTNGTHDVGPMQFNTAY   65 (206)
T ss_pred             HHHHhCC-CCCCEEe-CCCCCEEeCCcccccHh
Confidence            8999996 9999995 78999999999999965

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.46  E-value=0.0019  Score=48.24  Aligned_cols=32  Identities=34%  Similarity=0.709  Sum_probs=25.6

Q ss_pred             CCCCCCCCeEeeCCCCCceEeecCCCCeecCCCc
Q psy9686         653 LNPCQNNATCVASPGDKQITCLCLKGGTVSSEYC  686 (769)
Q Consensus       653 ~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C  686 (769)
                      ...|+.+++|.++.++  |.|+|.+||.|+|..|
T Consensus         5 ~~~C~~nA~C~~~~~~--~~C~C~~Gy~GdG~~C   36 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGS--YTCTCKPGYEGDGFFC   36 (36)
T ss_dssp             GGGS-TTCEEEE-TTS--EEEEE-CEEECCSTCE
T ss_pred             CCCCCCCcEeecCCCC--EEeECCCCCccCCcCC
Confidence            4578999999999886  9999999999998876

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.35  E-value=0.0054  Score=43.89  Aligned_cols=32  Identities=47%  Similarity=1.155  Sum_probs=27.7

Q ss_pred             CC-CCCCCCCcEEeeCCCCccceEeeCCCCCcCC-CC
Q psy9686         518 CA-GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ-SG  552 (769)
Q Consensus       518 C~-s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~-~C  552 (769)
                      |. ..+|.+++.|++..++   |.|.|+.||.|. .|
T Consensus         2 C~~~~~C~~~~~C~~~~~~---~~C~C~~g~~g~~~C   35 (36)
T cd00053           2 CAASNPCSNGGTCVNTPGS---YRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCCCCEEecCCCC---eEeECCCCCcccCCc
Confidence            44 6789999999998876   999999999998 65

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.15  E-value=0.0016  Score=65.32  Aligned_cols=145  Identities=22%  Similarity=0.518  Sum_probs=80.0

Q ss_pred             CCCCCCcEEeeCCCCccceEeeCCCCCcC---CCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccccc
Q psy9686         521 RPCRNNGTCTPVSGGVVNFTCTCPSGGQG---QSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITP  597 (769)
Q Consensus       521 ~PC~ngGtCvn~~gs~~~y~C~C~~GftG---~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~  597 (769)
                      ..|.| |..++....   |.|.|.+||.-   .+|+...+|..               -+-...+|++.+          
T Consensus         6 T~CKN-G~LiQMSNH---fEC~Cnegfvl~~EntCE~kv~C~~---------------~e~~~K~Cgdya----------   56 (197)
T PF06247_consen    6 TICKN-GYLIQMSNH---FECKCNEGFVLKNENTCEEKVECDK---------------LENVNKPCGDYA----------   56 (197)
T ss_dssp             ---BT-EEEEEESSE---EEEEESTTEEEEETTEEEE----SG----------------GGTTSEEETTE----------
T ss_pred             ccccC-CEEEEccCc---eEEEcCCCcEEccccccccceecCc---------------ccccCccccchh----------
Confidence            35666 566665554   99999999953   34776666621               122344554433          


Q ss_pred             ccccccccccceeeccccccCCCccccC-----CCCcccccCCCCCCC--ccccccccccccCCCCCCCCeEeeCCCC-C
Q psy9686         598 VYLWLMKMKTLVMVQYYLQQNISPLKDG-----NLSFYCNCTEDFTGE--YCQFENSAACVTLNPCQNNATCVASPGD-K  669 (769)
Q Consensus       598 gy~~~~~~~~C~~~~~~~c~ngg~C~n~-----~gsy~C~C~~Gy~G~--~Ce~~~ideC~~~~pC~n~gtCvnt~Gs-~  669 (769)
                                             .|++.     ...|.|.|.+||.-.  .|.   .+.|. ...|. .|.|+-.+.. .
T Consensus        57 -----------------------~C~~~~~~~~~~~~~C~C~~gY~~~~~vCv---p~~C~-~~~Cg-~GKCI~d~~~~~  108 (197)
T PF06247_consen   57 -----------------------KCINQANKGEERAYKCDCINGYILKQGVCV---PNKCN-NKDCG-SGKCILDPDNPN  108 (197)
T ss_dssp             -----------------------EEEE-SSTTSSTSEEEEE-TTEEESSSSEE---EGGGS-S---T-TEEEEEEEGGGS
T ss_pred             -----------------------hhhcCCCcccceeEEEecccCceeeCCeEc---hhhcC-ceecC-CCeEEecCCCCC
Confidence                                   34332     356999999999743  554   34665 45576 5788754322 2


Q ss_pred             ceEeecCCCCe-ecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         670 QITCLCLKGGT-VSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       670 ~y~C~C~~Gft-g~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                      ...|+|.-|+. .++..|+..-...|  +--|..+-.|..+.+.  |+|.|.+|+.|.
T Consensus       109 ~~~CSC~IGkV~~dn~kCtk~G~T~C--~LKCk~nE~CK~~~~~--Y~C~~~~~~~~~  162 (197)
T PF06247_consen  109 NPTCSCNIGKVPDDNKKCTKTGETKC--SLKCKENEECKLVDGY--YKCVCKEGFPGD  162 (197)
T ss_dssp             EEEEEE-TEEETTTTTESEEEE----------TTTEEEEEETTE--EEEEE-TT-EEE
T ss_pred             CceeEeeeceEeccCCcccCCCccce--eeecCCCcceeeeCcE--EEeecCCCCCCC
Confidence            36899999987 45567765333456  3557777799999877  999999999643

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.06  E-value=0.009  Score=43.36  Aligned_cols=32  Identities=44%  Similarity=1.083  Sum_probs=27.1

Q ss_pred             CCCC-CCCCCCcEEeeCCCCccceEeeCCCCCcC-CCC
Q psy9686         517 GCAG-RPCRNNGTCTPVSGGVVNFTCTCPSGGQG-QSG  552 (769)
Q Consensus       517 eC~s-~PC~ngGtCvn~~gs~~~y~C~C~~GftG-~~C  552 (769)
                      +|.. .+|.++ +|++..++   |.|.|++||.| ..|
T Consensus         1 ~C~~~~~C~~~-~C~~~~~~---~~C~C~~g~~g~~~C   34 (35)
T smart00181        1 ECASGGPCSNG-TCINTPGS---YTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCcCCCCCC-EEECCCCC---eEeECCCCCccCCcc
Confidence            3555 689998 99998776   99999999999 766

>PF01464 SLT: Transglycosylase SLT domain; InterPro: IPR008258 Bacterial lytic transglycosylases degrade murein via cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine, with the concomitant formation of a 1,6-anhydrobond in the muramic acid residue

Probab=95.74  E-value=0.0021  Score=59.84  Aligned_cols=64  Identities=30%  Similarity=0.274  Sum_probs=45.3

Q ss_pred             eeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCCccccccccccccCCChhHHHHHHHHHHhcc
Q psy9686         307 IATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQT  377 (769)
Q Consensus       307 la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~~~~C~~~C~~ll~~di~~~i~Cak~i~~~~  377 (769)
                      |++.||+|++.+++.. .+++.++|||||+...|=.-....+     .-.+++ .|....|..+-+++++.
T Consensus        20 i~~~ES~~~~~a~~~~-~~~~~a~GlmQi~~~t~~~~~~~~~-----~~~~~~-~dp~~ni~~g~~~L~~~   83 (121)
T PF01464_consen   20 IAYQESGFNPNAVSYN-SNGSGAYGLMQINPATWKDYGRKGG-----LSPDDL-FDPEDNIQAGAKYLKWL   83 (121)
T ss_dssp             HHHHHHTTCTTTBTTB-ETTTTEETTTTEETTTSHHHSHTHC-----TSHHHH-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCcCCC-CCCCcceeccccCCcccchhhhccc-----ccchhh-hCHHHHHHHHHHHHHHH
Confidence            8999999999999853 6788899999999988865321100     122333 35566777877777763

There are both soluble (Slt enzymes) and membrane-bound (Mlt enzymes) lytic transglycosylases that differ in size, sequence, activity, specificity and location. The multi-domain structure of the 70 Kd soluble lytic transglycosylase Slt70 is known []. Slt70 has 3 distinct domains, each rich in alpha helices: an N-terminal superhelical U-shaped domain (U-domain; IPR008939 from INTERPRO), a superhelical linker domain (L-domain, IPR012289 from INTERPRO), and a C-terminal catalytic domain (IPR008258 from INTERPRO). Both the U- and L-domain share a similar superhelical structure. These two domains are connected, and together form a closed ring with a large central hole; the catalytic domain is packed on top of, and interacts with, this ring. The catalytic domain has a lysosome-like fold. This entry represents the catalytic domain, which is structurally conserved in some membrane-bound lytic glycosylases and in bacteriophage transglycosylases, even though their sequences can differ considerably proteins []. The most conserved part of this domain is its N-terminal extremity that contains two conserved serines and a glutamate, which have been shown [] to be involved in the catalytic mechanism. This family is distantly related to IPR001916 from INTERPRO.; PDB: 2Y8P_B 3MGW_A 1QTE_A 1SLY_A 1QSA_A 153L_A 154L_A 3BKV_A 3BKH_A 1LSP_A ....

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.73  E-value=0.017  Score=41.26  Aligned_cols=30  Identities=43%  Similarity=1.056  Sum_probs=25.9

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCC-CC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGP-HR  728 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~-~C  728 (769)
                      ..+|.+++.|++..+.  |+|.|++||.|. .|
T Consensus         5 ~~~C~~~~~C~~~~~~--~~C~C~~g~~g~~~C   35 (36)
T cd00053           5 SNPCSNGGTCVNTPGS--YRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCEEecCCCC--eEeECCCCCcccCCc
Confidence            4578888999998866  999999999998 66

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.43  E-value=0.022  Score=41.25  Aligned_cols=29  Identities=45%  Similarity=1.106  Sum_probs=24.7

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCC-CCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEG-PHRE  729 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG-~~Ce  729 (769)
                      .+|.++ .|+++.++  |+|.|++||.| ..|+
T Consensus         6 ~~C~~~-~C~~~~~~--~~C~C~~g~~g~~~C~   35 (35)
T smart00181        6 GPCSNG-TCINTPGS--YTCSCPPGYTGDKRCE   35 (35)
T ss_pred             CCCCCC-EEECCCCC--eEeECCCCCccCCccC
Confidence            578888 99998766  99999999999 7763

>KOG1836|consensus

Probab=95.29  E-value=0.18  Score=65.94  Aligned_cols=197  Identities=21%  Similarity=0.416  Sum_probs=98.5

Q ss_pred             CCCCCCCCCcEEeeCCCCccceEee-CCCCCcCCCCcccccchh-ccc-cC---ceeeeeeeec--ccCCCCCCCCC-CC
Q psy9686         518 CAGRPCRNNGTCTPVSGGVVNFTCT-CPSGGQGQSGLEITPVYL-WLM-KL---KTLVMVQYYF--RRKSTSPHKSR-GQ  588 (769)
Q Consensus       518 C~s~PC~ngGtCvn~~gs~~~y~C~-C~~GftG~~CedideC~~-~~~-~~---~~~~~~~~~~--~~Cs~~pC~~~-g~  588 (769)
                      |.+-||.+++.|..... .....|+ |++||+|.+|+.-++=+. +.. .+   ..|..|+...  +.-....|... +.
T Consensus       777 C~~C~Cp~~~~~~~~~~-~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~~c~c~~n~dp~~~g~c~~~tg~  855 (1705)
T KOG1836|consen  777 CQPCPCPNGGACGQTPE-ILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQSCQCNFNVDPNAFGNCNRLTGE  855 (1705)
T ss_pred             CccCCCCCChhhcCcCc-ccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCccceeccccCccccccccccccc
Confidence            88888999999988764 2457899 999999999954222111 111 11   2333222222  21122223221 22


Q ss_pred             c---------CCCccccccccccccc----ccceeeccccc---cCCCccccCCCCcccccCCCCCCCccccc-----cc
Q psy9686         589 G---------QSGLEITPVYLWLMKM----KTLVMVQYYLQ---QNISPLKDGNLSFYCNCTEDFTGEYCQFE-----NS  647 (769)
Q Consensus       589 C---------~~~~~C~~gy~~~~~~----~~C~~~~~~~c---~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~-----~i  647 (769)
                      |         ..+..|.++|.+..-.    ..|..++-..-   ....+|..-.|  .|.|.+.-.|..|..-     ++
T Consensus       856 c~~ci~nT~g~~cd~c~~g~~gd~l~~~p~~~c~~c~c~p~gs~~~~~~c~~~tG--Qcec~~~v~g~~c~~c~~g~fnl  933 (1705)
T KOG1836|consen  856 CLKCIHNTAGEYCDLCKEGYFGDPLAPNPEDKCFACGCVPAGSELPSLTCNPVTG--QCECKPNVEGRDCLYCFKGFFNL  933 (1705)
T ss_pred             eeeccCCcccccccccccCccccccCCCcCCccccccCccCCcccccccCCCccc--ceeccCCCCcccccccccccccc
Confidence            3         2233677887764322    33443332110   00122433322  5556555555544320     00


Q ss_pred             c---ccccCCCCCCC----CeEeeCCCCCceEeecCCCCeecCCCcccc-------CCccccCCCCCCCCC----EEecC
Q psy9686         648 A---ACVTLNPCQNN----ATCVASPGDKQITCLCLKGGTVSSEYCQFE-------NSAACVTLNPCQNNA----TCVAS  709 (769)
Q Consensus       648 d---eC~~~~pC~n~----gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~-------~ideC~s~~pC~ngg----~Cvnt  709 (769)
                      +   .|. +..|..-    ..|....|    .|.|.+|-+  |..|..-       ....|. .-.|...|    +|...
T Consensus       934 ~s~~gC~-~c~c~~~gs~~~~c~~~tG----qc~c~~gVt--gqrc~qc~~~~~~~~~~gc~-~c~c~~~Gs~~~qc~~~ 1005 (1705)
T KOG1836|consen  934 NSGVGCE-PCNCDPTGSESSDCDVGTG----QCYCRPGVT--GQRCDQCETYHFGFQTEGCG-LCECDPLGSRGFQCDPE 1005 (1705)
T ss_pred             CCCCCcc-cccccccccccccccccCC----ceeeecCcc--ccccCccccCcccccccCCc-ceecccCCcccceeccc
Confidence            1   222 2233322    25655544    488888887  6555420       001121 11244433    67765


Q ss_pred             CCCCceEEecCCCCCCCCCC
Q psy9686         710 PGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       710 ~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      .|    +|.|++|+.|.+|.
T Consensus      1006 ~G----~c~c~~~~~g~~c~ 1021 (1705)
T KOG1836|consen 1006 DG----QCPCRPGFEGRRCD 1021 (1705)
T ss_pred             CC----eeeecCCCCCcccc
Confidence            44    89999999998874

>PRK13864 type IV secretion system lytic transglycosylase VirB1; Provisional

Probab=95.08  E-value=0.007  Score=63.76  Aligned_cols=33  Identities=42%  Similarity=0.473  Sum_probs=28.7

Q ss_pred             eeccccCCCcccccCCCCCC-----------------------Cceeeeeeeccccc
Q psy9686         307 IATKESNRNSNARSPKNGNG-----------------------SRDHGIFQINDKYW  340 (769)
Q Consensus       307 la~~eS~~~t~a~~~~~~~g-----------------------s~~yGifQIn~~~W  340 (769)
                      ||..||+||+-||+. |.+|                       +.|.||.|||+++.
T Consensus        49 Ia~vESg~nP~AI~~-N~~G~~l~~qs~~EAi~~a~~l~~~g~s~DvGLmQINs~nl  104 (245)
T PRK13864         49 IAKVESRFDPLAVHD-NTTGETLHWQNHAQATQSVRHRLEARHSLDVGLMQINSKNF  104 (245)
T ss_pred             HHHHhccCCCcceee-cCCCCccCCCCHHHHHHHHHHHHhcCCceeeechhccHHHH
Confidence            999999999999984 5566                       79999999999663

>cd00254 LT_GEWL Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain

Probab=94.86  E-value=0.01  Score=53.82  Aligned_cols=61  Identities=18%  Similarity=0.151  Sum_probs=43.2

Q ss_pred             eeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCCccccccccccccCCChhHHHHHHHHHHhcc
Q psy9686         307 IATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQT  377 (769)
Q Consensus       307 la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~~~~C~~~C~~ll~~di~~~i~Cak~i~~~~  377 (769)
                      |++.||+|+..+++    +++.++|||||+...|-.-.....    .  ....--|..+.|.-|-++++..
T Consensus         7 i~~~ES~~~~~a~~----~~~~a~GlmQi~~~~~~~~~~~~~----~--~~~~~~dp~~ni~~~~~~l~~~   67 (113)
T cd00254           7 IIRQESGFNPNAVN----SGAGAVGLMQFMPSTARAYGVDGG----D--GADDLFDPEDNIRAGARYLKEL   67 (113)
T ss_pred             HHHHHCCCCCCCcc----CCCCCeeeeeeCchHHHHHHHhcC----C--ChhhcCCHHHHHHHHHHHHHHH
Confidence            78899999999984    468899999999999975332110    0  0112246777888888887764

Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic "goose-type" lysozymes (GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=94.85  E-value=0.02  Score=39.02  Aligned_cols=19  Identities=47%  Similarity=1.001  Sum_probs=16.5

Q ss_pred             eEeeCCCCCc----CCCCccccc
Q psy9686         539 FTCTCPSGGQ----GQSGLEITP  557 (769)
Q Consensus       539 y~C~C~~Gft----G~~Cedide  557 (769)
                      |+|.|++||.    |.+|+||||
T Consensus         2 y~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    2 YTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             EEeeCCCCCcCCCCCCccccCCC
Confidence            9999999995    667999886

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=94.84  E-value=0.022  Score=38.77  Aligned_cols=19  Identities=32%  Similarity=0.796  Sum_probs=16.6

Q ss_pred             eEEecCCCCC----CCCCCCCCCC
Q psy9686         715 ITCLCLKGFE----GPHRELPVES  734 (769)
Q Consensus       715 y~C~C~~Gyt----G~~Ce~dide  734 (769)
                      |+|.|++||.    |..|+ ||||
T Consensus         2 y~C~C~~Gy~l~~d~~~C~-DIdE   24 (24)
T PF12662_consen    2 YTCSCPPGYQLSPDGRSCE-DIDE   24 (24)
T ss_pred             EEeeCCCCCcCCCCCCccc-cCCC
Confidence            9999999996    78895 8886

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=94.20  E-value=0.013  Score=59.03  Aligned_cols=129  Identities=21%  Similarity=0.426  Sum_probs=79.8

Q ss_pred             cccCCCCcccccCCCCC---CCcccccccccccc----CCCCCCCCeEeeCCC---CCceEeecCCCCeecCCCccccCC
Q psy9686         622 LKDGNLSFYCNCTEDFT---GEYCQFENSAACVT----LNPCQNNATCVASPG---DKQITCLCLKGGTVSSEYCQFENS  691 (769)
Q Consensus       622 C~n~~gsy~C~C~~Gy~---G~~Ce~~~ideC~~----~~pC~n~gtCvnt~G---s~~y~C~C~~Gftg~G~~C~~~~i  691 (769)
                      .+...+-|.|.|.+||.   -.+|+.  ..+|..    ..+|..-+.|++...   ...|.|.|.+||+.....|..   
T Consensus        13 LiQMSNHfEC~Cnegfvl~~EntCE~--kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vCvp---   87 (197)
T PF06247_consen   13 LIQMSNHFECKCNEGFVLKNENTCEE--KVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGVCVP---   87 (197)
T ss_dssp             EEEESSEEEEEESTTEEEEETTEEEE------SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSEEE---
T ss_pred             EEEccCceEEEcCCCcEEcccccccc--ceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCeEch---
Confidence            33445678999999996   457884  346752    346988999998763   246999999999976667763   


Q ss_pred             ccccCCCCCCCCCEEecCCC-CCceEEecCCCCC---CCCCCCCCC-CCCCCCCCCCceeeCCCCccccCC
Q psy9686         692 AACVTLNPCQNNATCVASPG-DKQITCLCLKGFE---GPHRELPVE-SVDEPPSEDETSVDLQLGSQANSY  757 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~G-s~~y~C~C~~Gyt---G~~Ce~did-eC~~npC~~GtC~n~~ggy~C~~~  757 (769)
                      +.|. ...|. .|.|+-.+. .+...|.|.-|+.   ...|..+-+ .|+.-+-.+..|+...+=|+|..-
T Consensus        88 ~~C~-~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~LKCk~nE~CK~~~~~Y~C~~~  156 (197)
T PF06247_consen   88 NKCN-NKDCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSLKCKENEECKLVDGYYKCVCK  156 (197)
T ss_dssp             GGGS-S---T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE--------TTTEEEEEETTEEEEEE-
T ss_pred             hhcC-ceecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceeeecCCCcceeeeCcEEEeecC
Confidence            4785 66787 458975432 2346999999986   444654322 255554467899999999999765

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=94.07  E-value=0.025  Score=42.26  Aligned_cols=29  Identities=41%  Similarity=0.863  Sum_probs=22.2

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPH  727 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~  727 (769)
                      ...|+.+|+|+++.++  |.|.|++||.|.-
T Consensus         5 ~~~C~~nA~C~~~~~~--~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGS--YTCTCKPGYEGDG   33 (36)
T ss_dssp             GGGS-TTCEEEE-TTS--EEEEE-CEEECCS
T ss_pred             CCCCCCCcEeecCCCC--EEeECCCCCccCC
Confidence            3568999999999886  9999999998763

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.61  E-value=0.088  Score=38.37  Aligned_cols=27  Identities=37%  Similarity=0.876  Sum_probs=22.8

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEGPHR  728 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~C  728 (769)
                      ..|.++|+|+...    .+|.|.+||+|..|
T Consensus         6 ~~C~~~G~C~~~~----g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVSPC----GRCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeCCC----CEEECCCCCcCCCC
Confidence            3588999999763    48999999999987

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.39  E-value=0.11  Score=37.89  Aligned_cols=27  Identities=33%  Similarity=0.698  Sum_probs=22.8

Q ss_pred             CCCCCCcEEeeCCCCccceEeeCCCCCcCCCC
Q psy9686         521 RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSG  552 (769)
Q Consensus       521 ~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~C  552 (769)
                      ..|.++|+|+...     ..|.|++||+|..|
T Consensus         6 ~~C~~~G~C~~~~-----g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVSPC-----GRCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeCCC-----CEEECCCCCcCCCC
Confidence            4699999999752     48999999999876

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=93.20  E-value=0.038  Score=32.24  Aligned_cols=13  Identities=46%  Similarity=1.135  Sum_probs=10.9

Q ss_pred             EEecCCCCCCCCC
Q psy9686         716 TCLCLKGFEGPHR  728 (769)
Q Consensus       716 ~C~C~~GytG~~C  728 (769)
                      .|+|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            5999999999987

>PF06737 Transglycosylas: Transglycosylase-like domain; InterPro: IPR010618 This family of proteins is very likely to act as transglycosylase enzymes related to IPR001916 from INTERPRO and IPR008258 from INTERPRO

Probab=92.59  E-value=0.024  Score=49.45  Aligned_cols=71  Identities=24%  Similarity=0.419  Sum_probs=47.8

Q ss_pred             cccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccccccccCCChhHHHHHHHHHHhccc
Q psy9686         301 VPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQ  378 (769)
Q Consensus       301 l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~C~~ll~~di~~~i~Cak~i~~~~~  378 (769)
                      -.+|--||+-||+-|- ++|.    |+..||+||+...-|=..++..  .+      -++  .--..-|.=|++|+..  
T Consensus         4 ~~~Wd~ia~cESgGn~-~~nt----gnG~yGg~Qf~~sTW~a~Gg~~yap~------~~~--As~~eQi~~A~~l~~~--   68 (77)
T PF06737_consen    4 ASDWDAIAQCESGGNW-AINT----GNGYYGGLQFSQSTWRAYGGSGYAPR------PDQ--ASRAEQIAVAEKLYAR--   68 (77)
T ss_dssp             HHHHHHHHHHHCTT-T-T-------SSSBBTTTTBBHHHHHHTTGGGT-SS------CCC--S-HHHHHHHHHHHHHH--
T ss_pred             hHHHHHHHHHHcCCCC-ccCC----CCCccceeccCHHHHHHhCCCcCCCC------hhh--CCHHHHHHHHHHHHHH--
Confidence            3578889999999999 5542    5668999999999997654321  00      011  1234557788999998  


Q ss_pred             ccccCccccccc
Q psy9686         379 RARGNGFQAWST  390 (769)
Q Consensus       379 ~~~~~G~~aW~~  390 (769)
                          +|+.+|+.
T Consensus        69 ----qG~gaWp~   76 (77)
T PF06737_consen   69 ----QGWGAWPV   76 (77)
T ss_dssp             ----HSSTTSTC
T ss_pred             ----cCCCcCCC
Confidence                79999984

These other families are weakly matched by this family, and include the known active site residues.; GO: 0005576 extracellular region; PDB: 1XSF_A 3EO5_A.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=91.67  E-value=0.075  Score=31.04  Aligned_cols=13  Identities=46%  Similarity=1.060  Sum_probs=10.7

Q ss_pred             EeeCCCCCcCCCC
Q psy9686         540 TCTCPSGGQGQSG  552 (769)
Q Consensus       540 ~C~C~~GftG~~C  552 (769)
                      .|.|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            4999999999987

>cd01021 GEWL Goose Egg White Lysozyme domain

Probab=90.62  E-value=0.13  Score=51.53  Aligned_cols=49  Identities=16%  Similarity=0.284  Sum_probs=34.7

Q ss_pred             HHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeecccc
Q psy9686         287 AKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY  339 (769)
Q Consensus       287 a~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~  339 (769)
                      .++-.++++++-.-|.-   |+..||+|++.|++. +.+...++||+||+...
T Consensus        35 i~~aa~~y~idp~Li~A---ii~~ES~f~~~a~~~-~~s~~ga~GLMQi~p~t   83 (166)
T cd01021          35 IKKVGQKKCIDPAVIAA---IISRESRAGKVLKNG-WGGAGNGFGLMQVDKRS   83 (166)
T ss_pred             HHHHHHHhCcCHHHHHH---HHHHHcCCCcccccC-CCCCCCCeEEeeECccc
Confidence            33333345555443333   889999999999863 45677899999999864

Eukaryotic "goose-type" lysozymes (GEWL). These enzymes catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc). Members include tunicate, Japanese flounder, ostrich, and mouse.

>smart00051 DSL delta serrate ligand

Probab=89.98  E-value=0.39  Score=40.48  Aligned_cols=47  Identities=28%  Similarity=0.441  Sum_probs=35.5

Q ss_pred             eEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCC
Q psy9686         671 ITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHR  728 (769)
Q Consensus       671 y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~C  728 (769)
                      +.-.|.++|.  |..|..    .|...+.+..+.+|.. .|    .|.|.+||+|.+|
T Consensus        17 ~rv~C~~~~y--G~~C~~----~C~~~~d~~~~~~Cd~-~G----~~~C~~Gw~G~~C   63 (63)
T smart00051       17 IRVTCDENYY--GEGCNK----FCRPRDDFFGHYTCDE-NG----NKGCLEGWMGPYC   63 (63)
T ss_pred             EEeeCCCCCc--CCccCC----EeCcCccccCCccCCc-CC----CEecCCCCcCCCC
Confidence            5567999998  888873    5653455677788864 34    6999999999987

>KOG1836|consensus

Probab=89.65  E-value=0.64  Score=61.06  Aligned_cols=56  Identities=25%  Similarity=0.498  Sum_probs=37.7

Q ss_pred             ecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEe-cCCCCCCCCCCCCCC
Q psy9686         674 LCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCL-CLKGFEGPHRELPVE  733 (769)
Q Consensus       674 ~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~-C~~GytG~~Ce~did  733 (769)
                      +|..||.++..  .- ..+.|. +-+|.+++.|..+.......|. |++||+|.+|+...+
T Consensus       760 ~C~~GfYg~~~--~~-~~~dC~-~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~c~d  816 (1705)
T KOG1836|consen  760 QCVDGFYGLPD--LG-TSGDCQ-PCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEECAD  816 (1705)
T ss_pred             hhcCCCCCccc--cC-CCCCCc-cCCCCCChhhcCcCcccceecCCCCCCCcccccccCCC
Confidence            57777763211  11 112264 6778888888877644557998 999999999986333

>KOG1218|consensus

Probab=87.26  E-value=5.1  Score=43.22  Aligned_cols=80  Identities=28%  Similarity=0.609  Sum_probs=44.8

Q ss_pred             ccccCCCCcccccCCCCCCCccccc--cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCC
Q psy9686         621 PLKDGNLSFYCNCTEDFTGEYCQFE--NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLN  698 (769)
Q Consensus       621 ~C~n~~gsy~C~C~~Gy~G~~Ce~~--~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~  698 (769)
                      +|.+...  .|.+..++.+..|...  ....|.  ..|.+...+....    -.|.|.+||.  |..|... ...|....
T Consensus       118 ~C~~~~~--~c~~~~~~~~~~C~~~~~~g~~C~--~~c~~~~~~~~~~----~~c~c~~g~~--g~~~~~~-~~~c~~~~  186 (316)
T KOG1218|consen  118 TCANPRR--ECRCGGGYIGEQCGEENLVGLKCQ--RDCQCTGGCDCKN----GICTCQPGFV--GVFCVES-CSGCSPLT  186 (316)
T ss_pred             ccCCCcc--ceecCCcCccccccccCCCCCCcc--CCCCCccccCCCC----CceeccCCcc--ccccccc-CCCcCCCc
Confidence            4544432  5677777777777630  012232  2232222332222    2589999999  7777742 22265456


Q ss_pred             CCCCCCEEecCCC
Q psy9686         699 PCQNNATCVASPG  711 (769)
Q Consensus       699 pC~ngg~Cvnt~G  711 (769)
                      .|.+++.|....+
T Consensus       187 ~~~~g~~C~~~~~  199 (316)
T KOG1218|consen  187 ACENGAKCNRSTG  199 (316)
T ss_pred             ccCCCCeeecccc
Confidence            7888888887655

>PRK13888 conjugal transfer protein TrbN; Provisional

Probab=85.88  E-value=0.26  Score=50.57  Aligned_cols=18  Identities=33%  Similarity=0.588  Sum_probs=16.6

Q ss_pred             ecCCCCccceEeeeCCcc
Q psy9686          11 LDCRGSRDHGIFQINDKY   28 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~   28 (769)
                      .|.|||.|+||.|||+.|
T Consensus        48 ~N~NGT~DvGlMQINS~h   65 (206)
T PRK13888         48 RNTNGTHDVGPMQFNTAY   65 (206)
T ss_pred             eCCCCCEEeCCcccccHh
Confidence            589999999999999974

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=85.57  E-value=0.75  Score=43.82  Aligned_cols=32  Identities=19%  Similarity=0.545  Sum_probs=26.5

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +-|.|| +|.-...-+.+.|.|..||+|.+||.
T Consensus        51 ~YClHG-~C~yI~dl~~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         51 GYCLHG-DCIHARDIDGMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             CEeECC-EEEeeccCCCceeECCCCcccccccc
Confidence            458886 89877665668999999999999984

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=85.38  E-value=0.88  Score=34.11  Aligned_cols=20  Identities=35%  Similarity=0.850  Sum_probs=16.6

Q ss_pred             CeEeeCCCCCceEeecCCCCee
Q psy9686         660 ATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       660 gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      ..|++.+++  |+|.|++||..
T Consensus        10 h~C~~~~g~--~~C~C~~Gy~L   29 (36)
T PF14670_consen   10 HICVNTPGS--YRCSCPPGYKL   29 (36)
T ss_dssp             SEEEEETTS--EEEE-STTEEE
T ss_pred             CCCccCCCc--eEeECCCCCEE
Confidence            389999877  99999999985

...

>PHA02887 EGF-like protein; Provisional

Probab=84.28  E-value=0.93  Score=42.55  Aligned_cols=32  Identities=25%  Similarity=0.568  Sum_probs=26.2

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +-|.| |+|.-........|.|.+||+|.+|+.
T Consensus        92 ~YCiH-G~C~yI~dL~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887         92 DFCIN-GECMNIIDLDEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             CEeeC-CEEEccccCCCceeECCCCcccCCCCc
Confidence            45775 599877666668999999999999974

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=83.39  E-value=0.91  Score=34.04  Aligned_cols=23  Identities=30%  Similarity=0.947  Sum_probs=18.4

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCcC
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQG  549 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~GftG  549 (769)
                      .|++  +|++++++   |+|.|++||..
T Consensus         7 gC~h--~C~~~~g~---~~C~C~~Gy~L   29 (36)
T PF14670_consen    7 GCSH--ICVNTPGS---YRCSCPPGYKL   29 (36)
T ss_dssp             GSSS--EEEEETTS---EEEE-STTEEE
T ss_pred             CcCC--CCccCCCc---eEeECCCCCEE
Confidence            3665  99999987   99999999963

...

>smart00051 DSL delta serrate ligand

Probab=81.39  E-value=1.6  Score=36.80  Aligned_cols=47  Identities=30%  Similarity=0.622  Sum_probs=33.5

Q ss_pred             cccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCc
Q psy9686         629 FYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYC  686 (769)
Q Consensus       629 y~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C  686 (769)
                      +.-.|.++|.|..|+.    .|...+.+..+.+|.. .|.    |+|++||+  |..|
T Consensus        17 ~rv~C~~~~yG~~C~~----~C~~~~d~~~~~~Cd~-~G~----~~C~~Gw~--G~~C   63 (63)
T smart00051       17 IRVTCDENYYGEGCNK----FCRPRDDFFGHYTCDE-NGN----KGCLEGWM--GPYC   63 (63)
T ss_pred             EEeeCCCCCcCCccCC----EeCcCccccCCccCCc-CCC----EecCCCCc--CCCC
Confidence            3446999999999973    4753344666778854 354    89999999  6655

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=81.14  E-value=1.5  Score=45.55  Aligned_cols=34  Identities=24%  Similarity=0.538  Sum_probs=26.7

Q ss_pred             CccccCCCCCC--CCCCCcEEeeCCCCccceEeeCCCCCcC
Q psy9686         511 GAAALGGCAGR--PCRNNGTCTPVSGGVVNFTCTCPSGGQG  549 (769)
Q Consensus       511 gc~dideC~s~--PC~ngGtCvn~~gs~~~y~C~C~~GftG  549 (769)
                      .|.++++|...  +|.  ..|.+++++   |.|.|++||+.
T Consensus       183 ~C~~~~~C~~~~~~c~--~~C~~~~g~---~~c~c~~g~~~  218 (224)
T cd01475         183 ICVVPDLCATLSHVCQ--QVCISTPGS---YLCACTEGYAL  218 (224)
T ss_pred             cCcCchhhcCCCCCcc--ceEEcCCCC---EEeECCCCccC
Confidence            35567888544  465  489999998   99999999975

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=80.79  E-value=1.4  Score=42.10  Aligned_cols=40  Identities=18%  Similarity=0.471  Sum_probs=29.9

Q ss_pred             cCCCC---CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccc
Q psy9686         515 LGGCA---GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEIT  556 (769)
Q Consensus       515 ideC~---s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedid  556 (769)
                      +.+|.   .+-|-|| +|.-.+. ...+.|.|+.||+|.+|+..+
T Consensus        42 i~~Cp~ey~~YClHG-~C~yI~d-l~~~~CrC~~GYtGeRCEh~d   84 (139)
T PHA03099         42 IRLCGPEGDGYCLHG-DCIHARD-IDGMYCRCSHGYTGIRCQHVV   84 (139)
T ss_pred             cccCChhhCCEeECC-EEEeecc-CCCceeECCCCccccccccee
Confidence            45563   3458885 8987664 345899999999999998765

>PRK15470 emtA lytic murein endotransglycosylase E; Provisional

Probab=80.78  E-value=0.63  Score=48.09  Aligned_cols=38  Identities=29%  Similarity=0.355  Sum_probs=28.5

Q ss_pred             cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeecccc
Q psy9686         294 RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY  339 (769)
Q Consensus       294 ~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~  339 (769)
                      +|++-.-|.-   |++.||+||+.|+++     +..+||+||....
T Consensus        50 y~iDp~Ll~A---ii~qES~Fnp~A~S~-----aGA~GLMQImP~T   87 (203)
T PRK15470         50 WGVDPQLITA---IIAIESGGNPNAVSK-----SNAIGLMQLKAST   87 (203)
T ss_pred             cCCCHHHHHH---HHHHHcCCCCCCcCC-----CCCeeeccCCHHH
Confidence            4555433332   889999999999974     5699999998755

>KOG3516|consensus

Probab=80.57  E-value=1.1  Score=55.88  Aligned_cols=40  Identities=25%  Similarity=0.684  Sum_probs=35.0

Q ss_pred             ccccCCCCCCCCCCCcEEeeCCCCccceEeeCC-CCCcCCCCcc
Q psy9686         512 AAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       512 c~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      |.-++.|.++||+++|.|..+...   |.|.|. .||.|.+|+.
T Consensus       542 C~i~drClPN~CehgG~C~Qs~~~---f~C~C~~TGY~GatCHt  582 (1306)
T KOG3516|consen  542 CGISDRCLPNPCEHGGKCSQSWDD---FECNCELTGYKGATCHT  582 (1306)
T ss_pred             cccccccCCccccCCCcccccccc---eeEeccccccccccccC
Confidence            556788999999999999996665   999999 9999999953

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	769
2fbd_A	122	The Crystallographic Structure Of The Digestive Lys		4e-19
3cb7_A	126	The Crystallographic Structure Of The Digestive Lys		7e-17
1iiz_A	120	Crystal Structure Of The Induced Antibacterial Prot		1e-16
1qqy_A	130	X-Ray Crystal Structure Analysis Of Canine Milk Lys		3e-16
1el1_A	130	X-Ray Crystal Structure Analysis Of Canine Milk Lys		3e-16
2cwi_A	129	X-Ray Crystal Structure Analysis Of Recombinant Wil		4e-16
2lhm_A	130	Crystal Structures Of The Apo-And Holomutant Human		1e-15
1i22_A	130	Mutant Human Lysozyme (A83kQ86DA92D) Length = 130		2e-15
2rsc_A	120	Solution Structure Of The Bombyx Mori Lysozyme Leng		2e-15
3b6l_A	147	Crystal Structure Of Lysozyme Folded In Sds And 2-M		4e-15
1i20_A	130	Mutant Human Lysozyme (A92d) Length = 130		7e-15
1gfg_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		7e-15
1di3_A	130	Role Of Amino Acid Residues At Turns In The Conform		7e-15
2z2e_A	129	Crystal Structure Of Canine Milk Lysozyme Stabilize		7e-15
1gd6_A	119	Structure Of The Bombyx Mori Lysozyme Length = 119		8e-15
1i1z_A	130	Mutant Human Lysozyme (Q86d) Length = 130		9e-15
1c7p_A	134	Crystal Structure Of Mutant Human Lysozyme With Fou		9e-15
1c46_A	131	Mutant Human Lysozyme With Foreign N-Terminal Resid		1e-14
1gb5_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		1e-14
2eql_A	129	Crystallographic Studies Of A Calcium Binding Lysoz		1e-14
1lhi_A	130	Role Of Proline Residues In Human Lysozyme Stabilit		2e-14
1b5u_A	130	Contribution Of Hydrogen Bonds To The Conformationa		2e-14
1lsy_A	147	Crystal Structure Of The Mutant D52s Hen Egg White		2e-14
1ouc_A	130	Contribution Of Hydrophobic Residues To The Stabili		3e-14
1cj7_A	130	T11v Mutant Human Lysozyme Length = 130		3e-14
1gdx_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		3e-14
1gfv_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		3e-14
1d6q_A	130	Human Lysozyme E102 Mutant Labelled With 2',3'-Epox		3e-14
1gfe_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1gfj_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1oub_A	130	Contribution Of Hydrophobic Residues To The Stabili		4e-14
1bb3_A	130	Human Lysozyme Mutant A96l Length = 130		4e-14
1lhj_A	130	Role Of Proline Residues In Human Lysozyme Stabilit		4e-14
1gf8_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1gfu_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1gf3_A	130	Buried Polar Mutant Human Lysozyme Length = 130		4e-14
1ip3_A	130	G68a Human Lysozyme Length = 130		4e-14
1gbo_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1gf7_A	130	Buried Polar Mutant Human Lysozyme Length = 130		4e-14
1ip6_A	130	G127a Human Lysozyme Length = 130		4e-14
1gb2_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		4e-14
1oug_A	130	Contribution Of Hydrophobic Residues To The Stabili		5e-14
1b7m_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		5e-14
1ioc_A	134	Crystal Structure Of Mutant Human Lysozyme, Eaea-I5		5e-14
1gfa_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		5e-14
1cj6_A	130	T11a Mutant Human Lysozyme Length = 130		5e-14
1inu_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		5e-14
3ln2_A	130	Crystal Structure Of A Charge Engineered Human Lyso		5e-14
1lhh_A	130	Role Of Proline Residues In Human Lysozyme Stabilit		5e-14
1cj8_A	130	T40a Mutant Human Lysozyme Length = 130		5e-14
1ckf_A	130	T52a Mutant Human Lysozyme Length = 130		5e-14
2hea_A	130	Contribution Of Water Molecules In The Interior Of		5e-14
1ckc_A	130	T43a Mutant Human Lysozyme Length = 130		5e-14
1gf9_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		5e-14
1b5x_A	130	Contribution Of Hydrogen Bonds To The Conformationa		5e-14
1b7o_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		5e-14
1ouh_A	130	Contribution Of Hydrophobic Residues To The Stabili		5e-14
1eqe_A	130	Crystal Structures Of Salt Bridge Mutants Of Human		5e-14
1gb0_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1ge0_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gfr_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gb6_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gay_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
133l_A	130	Role Of Arg 115 In The Catalytic Action Of Human Ly		6e-14
1eq5_A	130	Crystal Structures Of Salt Bridge Mutants Of Human		6e-14
1gby_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1b7q_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		6e-14
1gb7_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gb9_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1lzs_A	130	Structural Changes Of The Active Site Cleft And Dif		6e-14
1ouf_A	130	Contribution Of Hydrophobic Residues To The Stabili		6e-14
1oue_A	130	Contribution Of Hydrophobic Residues To The Stabili		6e-14
1gb8_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gfk_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1lyy_A	130	Amyloidogenic Variant (Asp67his) Of Human Lysozyme		6e-14
1ip7_A	130	G129a Human Lysozyme Length = 130		6e-14
1ckh_A	130	T70v Mutant Human Lysozyme Length = 130		6e-14
1ckg_A	130	T52v Mutant Human Lysozyme Length = 130		6e-14
134l_A	130	Role Of Arg 115 In The Catalytic Action Of Human Ly		6e-14
1ckd_A	130	T43v Mutant Human Lysozyme Length = 130		6e-14
1gfh_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1b7s_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		6e-14
1wqp_A	130	Contribution Of Hydrogen Bonds To The Conformationa		6e-14
1gft_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-14
1gb3_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		7e-14
1wqn_A	130	Contribution Of Hydrogen Bonds To The Conformationa		7e-14
1gaz_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		7e-14
1lhl_A	130	Role Of Proline Residues In Human Lysozyme Stabilit		7e-14
1b5w_A	130	Contribution Of Hydrogen Bonds To The Conformationa		7e-14
1gbw_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		7e-14
1wqo_A	130	Contribution Of Hydrogen Bonds To The Conformationa		7e-14
1gbz_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		7e-14
1yam_A	130	Contribution Of Hydrophobic Residues To The Stabili		7e-14
1gbx_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		8e-14
1w08_A	130	Structure Of T70n Human Lysozyme Length = 130		8e-14
1ip4_A	130	G72a Human Lysozyme Length = 130		8e-14
1ip1_A	130	G37a Human Lysozyme Length = 130		8e-14
2heb_A	130	Contribution Of Water Molecules In The Interior Of		9e-14
1gdw_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		9e-14
1yao_A	130	Contribution Of Hydrophobic Residues To The Stabili		9e-14
1yap_A	130	Contribution Of Hydrophobic Residues To The Stabili		9e-14
1yan_A	130	Contribution Of Hydrophobic Residues To The Stabili		9e-14
1yaq_A	130	Contribution Of Hydrophobic Residues To The Stabili		9e-14
1gf5_A	130	Buried Polar Mutant Human Lysozyme Length = 130		9e-14
1b5y_A	130	Contribution Of Hydrogen Bonds To The Conformationa		1e-13
1b5v_A	130	Contribution Of Hydrogen Bonds To The Conformationa		1e-13
1c43_A	130	Mutant Human Lysozyme With Foreign N-Terminal Resid		1e-13
1b5z_A	130	Contribution Of Hydrogen Bonds To The Conformationa		1e-13
1cj9_A	130	T40v Mutant Human Lysozyme Length = 130		1e-13
1c45_A	130	Mutant Human Lysozyme With Foreign N-Terminal Resid		1e-13
1jkc_A	130	Human Lysozyme Mutant With Trp 109 Replaced By Phe		1e-13
1wqq_A	130	Contribution Of Hydrogen Bonds To The Conformationa		1e-13
2mee_A	130	Contribution Of Hydrophobic Effect To The Conformat		1e-13
2meb_A	130	Changes In Conformational Stability Of A Series Of		1e-13
2mef_A	130	Contribution Of Hydrophobic Effect To The Conformat		1e-13
2mec_A	130	Changes In Conformational Stability Of A Series Of		1e-13
1gf0_A	130	Buried Polar Mutant Human Lysozyme Length = 130		1e-13
1gez_A	130	Buried Polar Mutant Human Lysozyme Length = 130		1e-13
1lz5_A	134	Structural And Functional Analyses Of The Arg-Gly-A		1e-13
1eq4_A	130	Crystal Structures Of Salt Bridge Mutants Of Human		1e-13
1ge3_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		1e-13
1ge4_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		1e-13
1jka_A	130	Human Lysozyme Mutant With Glu 35 Replaced By Asp L		1e-13
1tcy_A	130	Dissection Of The Functional Role Of Structural Ele		1e-13
1wqm_A	130	Contribution Of Hydrogen Bonds To The Conformationa		1e-13
1gf6_A	130	Buried Polar Mutant Human Lysozyme Length = 130		2e-13
1ip5_A	130	G105a Human Lysozyme Length = 130		2e-13
1ouj_A	130	Contribution Of Hydrophobic Residues To The Stabili		2e-13
1oui_A	130	Contribution Of Hydrophobic Residues To The Stabili		2e-13
1oud_A	130	Contribution Of Hydrophobic Residues To The Stabili		2e-13
1gf4_A	130	Buried Polar Mutant Human Lysozyme Length = 130		2e-13
2mea_A	130	Changes In Conformational Stability Of A Series Of		2e-13
2med_A	130	Contribution Of Hydrophobic Effect To The Conformat		2e-13
1tdy_A	130	Dissection Of The Functional Role Of Structural Ele		2e-13
1laa_A	130	X-Ray Structure Of Glu 53 Human Lysozyme Length = 1		2e-13
1di5_A	129	Role Of Amino Acid Residues At Turns In The Conform		2e-13
1b7l_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		2e-13
2meh_A	130	Contribution Of Hydrophobic Effect To The Conformat		2e-13
1loz_A	130	Amyloidogenic Variant (I56t) Variant Of Human Lysoz		2e-13
1gev_A	130	Buried Polar Mutant Human Lysozyme Length = 130		3e-13
2hec_A	130	Contribution Of Water Molecules In The Interior Of		3e-13
2hef_A	130	Contribution Of Water Molecules In The Interior Of		3e-13
2hed_A	130	Contribution Of Water Molecules In The Interior Of		3e-13
1ip2_A	130	G48a Human Lysozyme Length = 130		3e-13
2mei_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-13
1jkb_A	130	Human Lysozyme Mutant With Glu 35 Replaced By Ala L		3e-13
1ge1_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		3e-13
1bb4_A	130	Human Lysozyme Double Mutant A96l, W109h Length = 1		3e-13
1d6p_A	130	Human Lysozyme L63 Mutant Labelled With 2',3'-Epoxy		4e-13
1b7r_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		4e-13
2meg_A	130	Changes In Conformational Stability Of A Series Of		4e-13
1lz6_A	138	Structural And Functional Analyses Of The Arg-Gly-A		4e-13
1lmt_A	136	Structure Of A Conformationally Constrained Arg-Gly		4e-13
208l_A	130	Mutant Human Lysozyme C77a Length = 130		4e-13
1lhk_A	130	Role Of Proline Residues In Human Lysozyme Stabilit		5e-13
1b7n_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		5e-13
1jkd_A	130	Human Lysozyme Mutant With Trp 109 Replaced By Ala		5e-13
2hee_A	130	Contribution Of Water Molecules In The Interior Of		5e-13
1tay_A	130	Dissection Of The Functional Role Of Structural Ele		5e-13
1ge2_A	130	Crystal Structure Of Mutant Human Lysozyme Substitu		6e-13
1b7p_A	130	Verification Of Spmp Using Mutant Human Lysozymes L		7e-13
2bqh_A	130	Contribution Of Hydrophobic Effect To The Conformat		1e-12
1ghl_A	130	The Three-Dimensional Structure Of Pheasant And Gui		2e-12
2bql_A	130	Contribution Of Hydrophobic Effect To The Conformat		2e-12
1di4_A	128	Role Of Amino Acid Residues At Turns In The Conform		3e-12
2bqm_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-12
1lhm_A	130	The Crystal Structure Of A Mutant Lysozyme C77(Slas		3e-12
2bqk_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-12
2bqj_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-12
1ior_A	129	Stabilization Of Hen Egg White Lysozyme By A Cavity		3e-12
2bqb_A	130	Contribution Of Hydrophobic Effect To The Conformat		4e-12
2bqd_A	130	Contribution Of Hydrophobic Effect To The Conformat		5e-12
2bqe_A	130	Contribution Of Hydrophobic Effect To The Conformat		5e-12
2bqc_A	130	Contribution Of Hydrophobic Effect To The Conformat		5e-12
1lzd_A	129	Dissection Of Protein-Carbohydrate Interactions In		7e-12
2bqi_A	130	Contribution Of Hydrophobic Effect To The Conformat		1e-11
1her_A	129	Structural And Thermodynamic Analysis Of Compensati		1e-11
1ioq_A	129	Stabilization Of Hen Egg White Lysozyme By A Cavity		1e-11
1nby_C	129	Crystal Structure Of Hyhel-63 Complexed With Hel Mu		1e-11
1iot_A	129	Stabilization Of Hen Egg White Lysozyme By A Cavity		1e-11
1qsw_A	130	Crystal Structure Analysis Of A Human Lysozyme Muta		1e-11
1heq_A	129	Structural And Thermodynamic Analysis Of Compensati		1e-11
1ix0_A	130	I59a-3ss Human Lysozyme Length = 130		1e-11
1flu_A	129	Hen Egg White Lysozyme Mutant With Alanine Substitu		2e-11
132l_A	129	Structural Consequences Of Reductive Methylation Of		2e-11
1a2y_C	129	Hen Egg White Lysozyme, D18a Mutant, In Complex Wit		2e-11
1flw_A	129	Hen Egg White Lysozyme Mutant With Alanine Substitu		2e-11
1bql_Y	129	Structure Of An Anti-Hel Fab Fragment Complexed Wit		2e-11
1ir7_A	129	Im Mutant Of Lysozyme Length = 129		2e-11
2iff_Y	129	Structure Of An Antibody-Lysozyme Complex: Effect O		2e-11
1kxx_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		2e-11
1kxw_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		2e-11
1uia_A	127	Analysis Of The Stabilization Of Hen Lysozyme With		2e-11
1hep_A	129	Structural And Thermodynamic Analysis Of Compensati		2e-11
1lzg_A	129	Dissection Of Protein-Carbohydrate Interactions In		2e-11
1jhl_A	129	Three-Dimensional Structure Of A Heteroclitic Antig		2e-11
1flq_A	129	Hen Egg White Lysozyme Mutant With Alanine Substitu		2e-11
1fbi_X	129	Crystal Structure Of A Cross-Reaction Complex Betwe		2e-11
1fdl_Y	129	Crystallographic Refinement Of The Three-Dimensiona		2e-11
1uic_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		2e-11
1kxy_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		2e-11
1hem_A	129	Structural And Thermodynamic Analysis Of Compensati		3e-11
1at6_A	129	Hen Egg White Lysozyme With A Isoaspartate Residue		3e-11
1v7s_A	129	Triclinic Hen Lysozyme Crystallized At 313k From A		3e-11
1uid_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		3e-11
1lsg_A	144	Three-Dimensional Structure Of The Platelet Integri		3e-11
1lsn_A	129	Thermal Stability Determinants Of Chicken Egg-White		3e-11
1uif_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		3e-11
1uie_A	129	Analysis Of The Stabilization Of Hen Lysozyme With		3e-11
3qy4_A	129	Crystallization And In Situ Data Collection Of Lyso		3e-11
1heo_A	129	Structural And Thermodynamic Analysis Of Compensati		3e-11
1ivm_A	130	Solution Structure Of Mouse Lysozyme M Length = 130		3e-11
1io5_A	129	Hydrogen And Hydration Of Hen Egg-White Lysozyme De		4e-11
1hen_A	129	Structural And Thermodynamic Analysis Of Compensati		4e-11
1ios_A	129	Stabilization Of Hen Egg White Lysozyme By A Cavity		4e-11
1ir9_A	129	Im Mutant Of Lysozyme Length = 129		5e-11
1ir8_A	129	Im Mutant Of Lysozyme Length = 129		5e-11
1lsm_A	129	Thermal Stability Determinants Of Chicken Egg-White		5e-11
1ndg_C	129	Crystal Structure Of Fab Fragment Of Antibody Hyhel		5e-11
1h6m_A	129	Covalent Glycosyl-Enzyme Intermediate Of Hen Egg Wh		6e-11
1dzb_X	129	Crystal Structure Of Phage Library-Derived Single-C		7e-11
1hhl_A	129	The Three-Dimensional Structure Of Pheasant And Gui		7e-11
3a3q_A	129	Structure Of N59d Hen Egg-White Lysozyme In Complex		7e-11
3ojp_A	129	D52n Mutant Of Hen Egg White Lysozyme (Hewl) Length		9e-11
1fly_A	129	Hen Egg White Lysozyme Mutant With Alanine Substitu		1e-10
1nbz_C	129	Crystal Structure Of Hyhel-63 Complexed With Hel Mu		1e-10
1lz2_A	129	Crystallographic Study Of Turkey Egg-White Lysozyme		1e-10
1fn5_A	129	Hen Egg White Lysozyme Mutant With Alanine Substitu		1e-10
3ok0_A	129	E35a Mutant Of Hen Egg White Lysozyme (Hewl) Length		1e-10
1at5_A	129	Hen Egg White Lysozyme With A Succinimide Residue L		1e-10
1bb6_A	129	Lysozyme Complex With 4-Methyl-Umbelliferyl Chitotr		1e-10
2z2f_A	129	X-Ray Crystal Structure Of Bovine Stomach Lysozyme		5e-10
2bqn_A	130	Contribution Of Hydrophobic Effect To The Conformat		8e-10
2ihl_A	129	Lysozyme (e.c.3.2.1.17) (japanese Quail) Length = 1		1e-09
2gv0_A	131	The Structure Of The Orthorhombic Form Of Soft-Shel		1e-09
2bqo_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-09
2bqg_A	130	Contribution Of Hydrophobic Effect To The Conformat		3e-09
1hml_A	142	Alpha_lactalbumin Possesses A Distinct Zinc Binding		1e-08
2bqf_A	130	Contribution Of Hydrophobic Effect To The Conformat		1e-08
1hfz_A	124	Alpha-Lactalbumin Length = 124		1e-08
1f6r_A	123	Crystal Structure Of Apo-Bovine Alpha-Lactalbumin L		2e-08
1fkv_A	124	Recombinant Goat Alpha-Lactalbumin T29i Length = 12		2e-08
1fkq_A	124	Recombinant Goat Alpha-Lactalbumin T29v Length = 12		3e-08
2goi_A	138	Crystal Structure Of Mouse Sperm C-Type Lysozyme-Li		4e-08
1a4v_A	123	Alpha-Lactalbumin Length = 123		5e-08
3b0i_A	124	Crystal Structure Of Recombinant Human Alpha Lactal		5e-08
1hmk_A	124	Recombinant Goat Alpha-Lactalbumin Length = 124		9e-08
1hfy_A	123	Alpha-Lactalbumin Length = 123		1e-07
3b0k_A	123	Crystal Structure Of Alpha-Lactalbumin Length = 123		1e-07
1alc_A	123	Refined Structure Of Baboon Alpha-Lactalbumin At 1.		1e-07
1b9o_A	123	Human Alpha-Lactalbumin, Low Temperature Form Lengt		1e-07
3b0o_A	123	Crystal Structure Of Alpha-Lactalbumin Length = 123		2e-07
1jug_A	125	Lysozyme From Echidna Milk (Tachyglossus Aculeatus)		9e-07
3zvq_A	70	Crystal Structure Of Proteolyzed Lysozyme Length =		3e-06
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		1e-04
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		5e-04

>pdb|2FBD|A Chain A, The Crystallographic Structure Of The Digestive Lysozyme 1 From Musca Domestica At 1.90 Ang. Length = 122

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K F  C LA+ +    G+ + ++P W CIA  ES+  +N   P N NGS D+GIFQIN+ 
Sbjct: 1   KTFTRCSLAREMY-ALGVPKSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINNY 59
Query: 339 YWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
           YWC  S    +  ECH  C +   +NI++ V C  KI SQ       G+ AWST+ YC
Sbjct: 60  YWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQ------QGWTAWSTWKYC 111

>pdb|3CB7|A Chain A, The Crystallographic Structure Of The Digestive Lysozyme 2 From Musca Domestica At 1.9 Ang. Length = 126

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 275 QIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQ 334
           + E K F  C LA+ + +  G+ +  +  W CIA  ES+ N+ A    N NGSRD+GIFQ
Sbjct: 1   EAEAKTFTRCSLAREMYK-LGVPKNQLARWTCIAEHESSYNTKAVGSLNSNGSRDYGIFQ 59
Query: 335 INDKYWCTASGPAG----KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWST 390
           IN+ YWC  S P+G     EC  KC  F  ++I   V C   +  Q       G+ AWST
Sbjct: 60  INNYYWC--SPPSGAFSYDECKIKCEDFLVDSIEPAVKCAQLVLKQ------QGWTAWST 111
Query: 391 YHYCN 395
           + YC+
Sbjct: 112 WKYCD 116

>pdb|1IIZ|A Chain A, Crystal Structure Of The Induced Antibacterial Protein From Tasar Silkworm, Antheraea Mylitta Length = 120

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           KRF  C L   L R++G     +  WVC+   ES R ++  +  N NGSRD+G+FQINDK
Sbjct: 1   KRFTRCGLVNEL-RKQGFDENLMRDWVCLVENESARYTDKIANVNKNGSRDYGLFQINDK 59
Query: 339 YWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
           YWC+     GK+C+  CS    ++IT    C  KI+ +T+      F AWS + ++CN
Sbjct: 60  YWCSKGSTPGKDCNVTCSQLLTDDITVASTCAKKIYKRTK------FDAWSGWDNHCN 111

>pdb|1QQY|A Chain A, X-Ray Crystal Structure Analysis Of Canine Milk Lysozyme (Apo-Type) Length = 130

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L  +   G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 2   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 61
Query: 337 DKYWCTA-SGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            K+WC + S  +   C+  CS F D+NI DD+AC  ++         NG  AW  +
Sbjct: 62  SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAW 112

>pdb|1EL1|A Chain A, X-Ray Crystal Structure Analysis Of Canine Milk Lysozyme (Holo-Type) Length = 130

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L  +   G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 2   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 61
Query: 337 DKYWCTA-SGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            K+WC + S  +   C+  CS F D+NI DD+AC  ++         NG  AW  +
Sbjct: 62  SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAW 112

>pdb|2CWI|A Chain A, X-Ray Crystal Structure Analysis Of Recombinant Wild-Type Canine Milk Lysozyme (Apo-Type) Length = 129

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L  +   G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 1   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 60
Query: 337 DKYWCTA-SGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            K+WC + S  +   C+  CS F D+NI DD+AC  ++         NG  AW  +
Sbjct: 61  SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAW 111

>pdb|2LHM|A Chain A, Crystal Structures Of The Apo-And Holomutant Human Lysozymes With An Introduced Ca2+ Binding Site Length = 130

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+  D+NI DDVAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLDDNIADDVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1I22|A Chain A, Mutant Human Lysozyme (A83kQ86DA92D) Length = 130

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS   D+NI DDVAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSKLLDDNIADDVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2RSC|A Chain A, Solution Structure Of The Bombyx Mori Lysozyme Length = 120

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 278 GKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIND 337
           GK F  C L   L R+ G     +  WVC+   ES+R++ +++  N NGS+D+G+FQIND
Sbjct: 1   GKTFTRCGLVHEL-RKHGFEENLMRNWVCLVEHESSRDT-SKTNTNRNGSKDYGLFQIND 58
Query: 338 KYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           +YWC+     GK+C+ KCS    ++IT    C  KI+   +R R + +  W  +
Sbjct: 59  RYWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIY---KRHRFDAWYGWKNH 109

>pdb|3B6L|A Chain A, Crystal Structure Of Lysozyme Folded In Sds And 2-Methyl-2, 4-Pentanediol Length = 147

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 263 LLVLVYCTLLPRQIEGKRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSN 317
           LL+LV C  LP    GK FG CELA  + R      RG +   +  WVC A  ESN N+ 
Sbjct: 4   LLILVLC-FLPLAALGKVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQ 59
Query: 318 ARSPKNGNGSRDHGIFQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHS 375
           A + +N +GS D+GI QIN ++WC      G    C+  CS+   ++IT  V C  KI S
Sbjct: 60  A-TNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS 118
Query: 376 QTQRARGNGFQAWSTYH 392
                 GNG  AW  + 
Sbjct: 119 D-----GNGMNAWVAWR 130

>pdb|1I20|A Chain A, Mutant Human Lysozyme (A92d) Length = 130

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI DDVAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADDVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFG|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           KRF  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KRFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1DI3|A Chain A, Role Of Amino Acid Residues At Turns In The Conformational Stability And Folding Of Human Lysozyme Length = 130

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+GS D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDGSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2Z2E|A Chain A, Crystal Structure Of Canine Milk Lysozyme Stabilized Against Non-Enzymatic Deamidation Length = 129

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L  +   G     +  WVC+A  ESN N+ A   +   GS D+GIFQ+N
Sbjct: 1   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFQGRQSQGSSDYGIFQLN 60
Query: 337 DKYWC-TASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            K+WC + S  +   C+  CS F D+NI DD+AC  ++    Q     G  AW  +
Sbjct: 61  SKWWCKSQSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPQ-----GMSAWVAW 111

>pdb|1GD6|A Chain A, Structure Of The Bombyx Mori Lysozyme Length = 119

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K F  C L   L R+ G     +  WVC+   ES+R++ +++  N NGS+D+G+FQIND+
Sbjct: 1   KTFTRCGLVHEL-RKHGFEENLMRNWVCLVEHESSRDT-SKTNTNRNGSKDYGLFQINDR 58
Query: 339 YWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           YWC+     GK+C+ KCS    ++IT    C  KI+   +R R + +  W  +
Sbjct: 59  YWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIY---KRHRFDAWYGWKNH 108

>pdb|1I1Z|A Chain A, Mutant Human Lysozyme (Q86d) Length = 130

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+  D+NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLDDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1C7P|A Chain A, Crystal Structure Of Mutant Human Lysozyme With Four Extra Residues (Eaea) At The N-Terminal Length = 134

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 275 QIEGKRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRD 329
           + E K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D
Sbjct: 1   EAEAKVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTD 57
Query: 330 HGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQA 387
           +GIFQIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +A
Sbjct: 58  YGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRA 112
Query: 388 WSTYHYCNTNSKVSTY 403
           W  +     N  V  Y
Sbjct: 113 WVAWRNRCQNRDVRQY 128

>pdb|1C46|A Chain A, Mutant Human Lysozyme With Foreign N-Terminal Residues Length = 131

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 278 GKRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGI 332
           GK F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GI
Sbjct: 1   GKVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGI 57
Query: 333 FQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWST 390
           FQIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  
Sbjct: 58  FQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVA 112
Query: 391 YHYCNTNSKVSTY 403
           +     N  V  Y
Sbjct: 113 WRNRCQNRDVRQY 125

>pdb|1GB5|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC    +  AG  CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAGNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2EQL|A Chain A, Crystallographic Studies Of A Calcium Binding Lysozyme From Equine Milk At 2.5 Angstroms Resolution Length = 129

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA  L  Q   G     +  WVC+A  ESN N+ A + KN NGS D+G+FQ+N
Sbjct: 1   KVFSKCELAHKLKAQEMDGFGGYSLANWVCMAEYESNFNTRAFNGKNANGSSDYGLFQLN 60
Query: 337 DKYWCTASG-PAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           +K+WC  +   +   C+  CS   D NI DD++C  ++    +     G  AW  +
Sbjct: 61  NKWWCKDNKRSSSNACNIMCSKLLDENIDDDISCAKRVVRDPK-----GMSAWKAW 111

>pdb|1LHI|A Chain A, Role Of Proline Residues In Human Lysozyme Stability: A Scanning Calorimetric Study Combined With X-Ray Structure Analysis Of Proline Mutants Length = 130

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC    +G A   CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTGGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B5U|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutant Length = 130

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGIA   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIA---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LSY|A Chain A, Crystal Structure Of The Mutant D52s Hen Egg White Lysozyme With An Oligosaccharide Product Length = 147

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 263 LLVLVYCTLLPRQIEGKRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSN 317
           LL+LV C  LP    GK FG CELA  + R      RG +   +  WVC A  ESN N+ 
Sbjct: 4   LLILVLC-FLPLAALGKVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQ 59
Query: 318 ARSPKNGNGSRDHGIFQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHS 375
           A + +N +GS  +GI QIN ++WC      G    C+  CS+   ++IT  V C  KI S
Sbjct: 60  A-TNRNTDGSTSYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS 118
Query: 376 QTQRARGNGFQAWSTYH 392
                 GNG  AW  + 
Sbjct: 119 D-----GNGMNAWVAWR 130

>pdb|1OUC|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V110a Mutant Length = 130

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW+ +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWAAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CJ7|A Chain A, T11v Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARVLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GDX|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 279 KRFGACELAKFLVR--QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G A   +  W+C+A  ES  N+ A +   G+ S D+GIFQIN
Sbjct: 1   KVFERCELARTLKRLGMDGYAGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60
Query: 337 DKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +   
Sbjct: 61  SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115
Query: 395 NTNSKVSTY 403
             N  V  Y
Sbjct: 116 CQNRDVRQY 124

>pdb|1GFV|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW+ +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWNAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1D6Q|A Chain A, Human Lysozyme E102 Mutant Labelled With 2',3'-Epoxypropyl Glycoside Of N-Acetyllactosamine Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++  + Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVREPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFE|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KNFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFJ|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G +  CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGADNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUB|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-ray Structure Of The V100a Mutant Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVARDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1BB3|A Chain A, Human Lysozyme Mutant A96l Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC+ ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACLKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LHJ|A Chain A, Role Of Proline Residues In Human Lysozyme Stability: A Scanning Calorimetric Study Combined With X-Ray Structure Analysis Of Proline Mutants Length = 130

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++        G G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRD-----GQGIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF8|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KSFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFU|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWDAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF3|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADSVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP3|A Chain A, G68a Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC  +   G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDAKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GBO|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWGAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF7|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVTRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP6|A Chain A, G127a Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTYDHA 406
                N  V  Y  A
Sbjct: 113 RNRCQNRDVRQYVQA 127

>pdb|1GB2|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KMFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUG|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V2a Mutant Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KAFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7M|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC+ ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACMKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IOC|A Chain A, Crystal Structure Of Mutant Human Lysozyme, Eaea-I56t Length = 134

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 275 QIEGKRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRD 329
           + E K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D
Sbjct: 1   EAEAKVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTD 57
Query: 330 HGIFQINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQA 387
           +G FQIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +A
Sbjct: 58  YGTFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRA 112
Query: 388 WSTYHYCNTNSKVSTY 403
           W  +     N  V  Y
Sbjct: 113 WVAWRNRCQNRDVRQY 128

>pdb|1GFA|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KDFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CJ6|A Chain A, T11a Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARALKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1INU|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWRAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|3LN2|A Chain A, Crystal Structure Of A Charge Engineered Human Lysozyme Variant Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVDDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNHCQNRDVRQY 124

>pdb|1LHH|A Chain A, Role Of Proline Residues In Human Lysozyme Stability: A Scanning Calorimetric Study Combined With X-Ray Structure Analysis Of Proline Mutants Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWPAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CJ8|A Chain A, T40a Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNARATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CKF|A Chain A, T52a Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSADYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2HEA|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q AR     AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGAR-----AWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CKC|A Chain A, T43a Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRAANYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF9|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KYFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B5X|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutants Length = 130

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLACSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7O|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESQYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUH|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V74a Mutant Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC    +  A   CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAANACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1EQE|A Chain A, Crystal Structures Of Salt Bridge Mutants Of Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRNVRQY 124

>pdb|1GB0|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KLFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GE0|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGGNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFR|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGARNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GB6|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAINACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GAY|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KGFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|133L|A Chain A, Role Of Arg 115 In The Catalytic Action Of Human Lysozyme. X-Ray Structure Of His 115 And Glu 115 Mutants Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNHCQNRDVRQY 124

>pdb|1EQ5|A Chain A, Crystal Structures Of Salt Bridge Mutants Of Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRNPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GBY|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWMAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7Q|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LALWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GB7|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGALNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GB9|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAFNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LZS|A Chain A, Structural Changes Of The Active Site Cleft And Different Saccharide Binding Modes In Human Lysozyme Co-Crystallized With Hexa-N-Acetyl- Chitohexaose At Ph 4.0 Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUF|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V130a Mutant Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUE|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V125a Mutant Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GB8|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAMNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFK|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGANNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LYY|A Chain A, Amyloidogenic Variant (Asp67his) Of Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNHGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP7|A Chain A, G129a Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CKH|A Chain A, T70v Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKVPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CKG|A Chain A, T52v Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSVDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|134L|A Chain A, Role Of Arg 115 In The Catalytic Action Of Human Lysozyme. X-Ray Structure Of His 115 And Glu 115 Mutants Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNECQNRDVRQY 124

>pdb|1CKD|A Chain A, T43v Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRAVNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFH|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAYNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7S|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGASNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1WQP|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNFNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GFT|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWYAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GB3|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KFFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1WQN|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGFRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GAZ|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KIFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LHL|A Chain A, Role Of Proline Residues In Human Lysozyme Stability: A Scanning Calorimetric Study Combined With X-Ray Structure Analysis Of Proline Mutants Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNPGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B5W|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutants Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINARYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GBW|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWIAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1WQO|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGFNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GBZ|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWFAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1YAM|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies And X-Ray Structural Analysis Of The Five Isoleucine To Valine Mutants Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GVRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GBX|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At The Surface Positions Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWLAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1W08|A Chain A, Structure Of T70n Human Lysozyme Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP4|A Chain A, G72a Human Lysozyme Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCT-ASGPAG-KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC     PA    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPAAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP1|A Chain A, G37a Human Lysozyme Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESAYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2HEB|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 279 KRFGACELAKFLVR--QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  W+C+A  ES  N+ A +   G+ S D+GIFQIN
Sbjct: 1   KVFERCELARTLKRLGMDGYRGASLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60
Query: 337 DKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +   
Sbjct: 61  SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115
Query: 395 NTNSKVSTY 403
             N  V  Y
Sbjct: 116 CQNRDVRQY 124

>pdb|1GDW|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 279 KRFGACELAKFLVR--QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  W+C+A  ES  N+ A +   G+ S D+GIFQIN
Sbjct: 1   KVFERCELARTLKRLGMDGYGGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60
Query: 337 DKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +   
Sbjct: 61  SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115
Query: 395 NTNSKVSTY 403
             N  V  Y
Sbjct: 116 CQNRDVRQY 124

>pdb|1YAO|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies And X-Ray Structural Analysis Of The Five Isoleucine To Valine Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G+F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGVF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1YAP|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies And X-Ray Structural Analysis Of The Five Isoleucine To Valine Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q+N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QVNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1YAN|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies And X-Ray Structural Analysis Of The Five Isoleucine To Valine Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RG++   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGVS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1YAQ|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies And X-Ray Structural Analysis Of The Five Isoleucine To Valine Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +N+ D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNVADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF5|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACSKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B5Y|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  E+  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWEAGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B5V|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ + D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRATDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1C43|A Chain A, Mutant Human Lysozyme With Foreign N-Terminal Residues Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 281 FGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIFQI
Sbjct: 3   FERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQI 59
Query: 336 NDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
           N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +  
Sbjct: 60  NSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRN 114
Query: 394 CNTNSKVSTY 403
              N  V  Y
Sbjct: 115 RCQNRDVRQY 124

>pdb|1B5Z|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme: Calorimetry And X-Ray Analysis Of Six Ser->ala Mutants Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  C++   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCAALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1CJ9|A Chain A, T40v Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N  A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNVRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1C45|A Chain A, Mutant Human Lysozyme With Foreign N-Terminal Residues Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 281 FGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIFQI
Sbjct: 3   FERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQI 59
Query: 336 NDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHY 393
           N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +  
Sbjct: 60  NSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRN 114
Query: 394 CNTNSKVSTY 403
              N  V  Y
Sbjct: 115 RCQNRDVRQY 124

>pdb|1JKC|A Chain A, Human Lysozyme Mutant With Trp 109 Replaced By Phe Length = 130

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAW 388
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q  R   F AW
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIR--AFVAW 112

>pdb|1WQQ|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDFGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEE|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q+N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QLNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEB|A Chain A, Changes In Conformational Stability Of A Series Of Mutant Human Lysozymes At Constant Positions Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G+F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGLF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEF|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q+N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QMNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEC|A Chain A, Changes In Conformational Stability Of A Series Of Mutant Human Lysozymes At Constant Positions Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G+F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGMF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GF0|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C++  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLSKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GEZ|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CEL++ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELSRTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LZ5|A Chain A, Structural And Functional Analyses Of The Arg-Gly-Asp Sequence Introduced Into Human Lysozyme Length = 134

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG------KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQA 387
           QIN +YWC      G        CH  CS+   +NI D VAC  ++    Q     G +A
Sbjct: 58  QINSRYWCNDGKTPGAVRGDSNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRA 112
Query: 388 WSTYHYCNTNSKVSTY 403
           W  +     N  V  Y
Sbjct: 113 WVAWRNRCQNRDVRQY 128

>pdb|1EQ4|A Chain A, Crystal Structures Of Salt Bridge Mutants Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  C+LA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCQLARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GE3|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112

>pdb|1GE4|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112

>pdb|1JKA|A Chain A, Human Lysozyme Mutant With Glu 35 Replaced By Asp Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  +S  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWDSGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1TCY|A Chain A, Dissection Of The Functional Role Of Structural Elements Of Tyrosine-63 In The Catalytic Action Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRFWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1WQM|A Chain A, Contribution Of Hydrogen Bonds To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  +
Sbjct: 113 RNRCQNRDVRQF 124

>pdb|1GF6|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  +     Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRTVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP5|A Chain A, G105a Human Lysozyme Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q  R     AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQAIR-----AWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUJ|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V99a Mutant Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  +     Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRAVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUI|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V93a Mutant Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D  AC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAAACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1OUD|A Chain A, Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: X-Ray Structure Of The V121a Mutant Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N     Y
Sbjct: 113 RNRCQNRDARQY 124

>pdb|1GF4|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D  AC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADATACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEA|A Chain A, Changes In Conformational Stability Of A Series Of Mutant Human Lysozymes At Constant Positions Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGFF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MED|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QFNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1TDY|A Chain A, Dissection Of The Functional Role Of Structural Elements Of Tyrosine-63 In The Catalytic Action Of Human Lysozyme Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRWWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LAA|A Chain A, X-Ray Structure Of Glu 53 Human Lysozyme Length = 130

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S ++GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTEYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1DI5|A Chain A, Role Of Amino Acid Residues At Turns In The Conformational Stability And Folding Of Human Lysozyme Length = 129

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++          G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRV------VDPQGIRAWVAW 111
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 112 RNRCQNRDVRQY 123

>pdb|1B7L|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+   ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLLKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEH|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QTNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LOZ|A Chain A, Amyloidogenic Variant (I56t) Variant Of Human Lysozyme Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGTF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GEV|A Chain A, Buried Polar Mutant Human Lysozyme Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CE A+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCETARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2HEC|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGAF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2HEF|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +N  D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNAADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2HED|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QANSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IP2|A Chain A, G48a Human Lysozyme Length = 130

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +    + S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAADRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEI|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QYNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1JKB|A Chain A, Human Lysozyme Mutant With Glu 35 Replaced By Ala Length = 130

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A   S  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWASGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GE1|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            IN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  AINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1BB4|A Chain A, Human Lysozyme Double Mutant A96l, W109h Length = 130

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 383
           QIN +YWC      G    CH  CS+   +NI D VAC+ ++    Q  R +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACLKRVVRDPQGIRAH 109

>pdb|1D6P|A Chain A, Human Lysozyme L63 Mutant Labelled With 2',3'-Epoxypropyl N,N'- Diacetylchitobiose Length = 130

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN + WC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRLWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7R|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
            IN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  GINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2MEG|A Chain A, Changes In Conformational Stability Of A Series Of Mutant Human Lysozymes At Constant Positions Length = 130

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QSNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LZ6|A Chain A, Structural And Functional Analyses Of The Arg-Gly-Asp Sequence Introduced Into Human Lysozyme Length = 138

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG----------KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 383
           QIN +YWC      G            CH  CS+   +NI D VAC  ++    Q     
Sbjct: 58  QINSRYWCNDGKTPGAVTGRGDSPANACHLSCSALLQDNIADAVACAKRVVRDPQ----- 112
Query: 384 GFQAWSTYHYCNTNSKVSTY 403
           G +AW  +     N  V  Y
Sbjct: 113 GIRAWVAWRNRCQNRDVRQY 132

>pdb|1LMT|A Chain A, Structure Of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme Length = 136

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWC--------TASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGF 385
           QIN +YWC           G +   CH  CS+   +NI D VAC  ++    Q     G 
Sbjct: 58  QINSRYWCNDGKTPGAVCRGDSCNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GI 112
Query: 386 QAWSTYHYCNTNSKVSTY 403
           +AW  +     N  V  Y
Sbjct: 113 RAWVAWRNRCQNRDVRQY 130

>pdb|208L|A Chain A, Mutant Human Lysozyme C77a Length = 130

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LHK|A Chain A, Role Of Proline Residues In Human Lysozyme Stability: A Scanning Calorimetric Study Combined With X-Ray Structure Analysis Of Proline Mutants Length = 130

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI   VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIAPAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7N|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A   S  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWLSGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1JKD|A Chain A, Human Lysozyme Mutant With Trp 109 Replaced By Ala Length = 130

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARG 382
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q  R 
Sbjct: 58  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRA 108

>pdb|2HEE|A Chain A, Contribution Of Water Molecules In The Interior Of A Protein To The Conformational Stability Length = 130

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QGNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1TAY|A Chain A, Dissection Of The Functional Role Of Structural Elements Of Tyrosine-63 In The Catalytic Action Of Human Lysozyme Length = 130

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN + WC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRAWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GE2|A Chain A, Crystal Structure Of Mutant Human Lysozyme Substituted At Left-Handed Helical Positions Length = 130

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    C   CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACALSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1B7P|A Chain A, Verification Of Spmp Using Mutant Human Lysozymes Length = 130

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    C   CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNACGLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQH|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW+ +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWAAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1GHL|A Chain A, The Three-Dimensional Structure Of Pheasant And Guinea-Fowl Egg Lysozymes Length = 130

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 278 GKRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGI 332
           GK +G CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI
Sbjct: 1   GKVYGRCELAAAMKRMGLDNYRGYS---LGNWVCAAKFESNFNTGA-TNRNTDGSTDYGI 56
Query: 333 FQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWST 390
            QIN ++WC      G +  CH  CS+   ++IT  V C  KI S      GNG  AW  
Sbjct: 57  LQINSRWWCNDGRTPGSKNLCHIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVA 111
Query: 391 YH 392
           + 
Sbjct: 112 WR 113

>pdb|2BQL|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KAFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1DI4|A Chain A, Role Of Amino Acid Residues At Turns In The Conformational Stability And Folding Of Human Lysozyme Length = 128

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+  R+    + S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNT--RATNYNDRSTDYGIF 55
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    CH  CS+   +NI D VAC  ++    Q     G +AW  +
Sbjct: 56  QINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAW 110
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 111 RNRCQNRDVRQY 122

>pdb|2BQM|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC    +  A    H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAANAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LHM|A Chain A, The Crystal Structure Of A Mutant Lysozyme C77(Slash)95a With Increased Secretion Efficiency In Yeast Length = 130

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQK|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQJ|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1IOR|A Chain A, Stabilization Of Hen Egg White Lysozyme By A Cavity-Filling Mutation Length = 129

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  L R      RG +   +  WVC A  ESN N+ A + +N +GS D+GIF
Sbjct: 1   KVFGRCELAAALKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIF 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|2BQB|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GVRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQD|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+G+F
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGVF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQE|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q+N +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QVNSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQC|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RG++   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGVS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1LZD|A Chain A, Dissection Of Protein-Carbohydrate Interactions In Mutant Hen Egg-White Lysozyme Complexes And Their Hydrolytic Activity Length = 129

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRYWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|2BQI|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N     Y
Sbjct: 113 RNRCQNRDARQY 124

>pdb|1HER|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IOQ|A Chain A, Stabilization Of Hen Egg White Lysozyme By A Cavity-Filling Mutation Length = 129

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA    R      RG +   +  WVC A  ESN N+ A + +N +GS D+GIF
Sbjct: 1   KVFGRCELAAAFKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIF 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1NBY|C Chain C, Crystal Structure Of Hyhel-63 Complexed With Hel Mutant K96a Length = 129

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAAKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IOT|A Chain A, Stabilization Of Hen Egg White Lysozyme By A Cavity-Filling Mutation Length = 129

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  L R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAALKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1QSW|A Chain A, Crystal Structure Analysis Of A Human Lysozyme Mutant W64c C65a Length = 130

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGP---AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWST 390
           QIN +Y C   G    A   CH  CS+   +NI D VAC  ++    Q     G +AW  
Sbjct: 58  QINSRY-CANDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVA 111
Query: 391 YHYCNTNSKVSTY 403
           +     N  V  Y
Sbjct: 112 WRNRCQNRDVRQY 124

>pdb|1HEQ|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITATVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IX0|A Chain A, I59a-3ss Human Lysozyme Length = 130

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q N +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QANSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1FLU|A Chain A, Hen Egg White Lysozyme Mutant With Alanine Substituted For Glycine Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC  +   G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDARTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|132L|A Chain A, Structural Consequences Of Reductive Methylation Of Lysine Residues In Hen Egg White Lysozyme: An X-Ray Analysis At 1.8 Angstroms Resolution Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 281 FGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI QI
Sbjct: 3   FGRCELAAAMXRHGLDNYRGYS---LGNWVCAAXFESNFNTQA-TNRNTDGSTDYGILQI 58
Query: 336 NDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH 392
           N ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  + 
Sbjct: 59  NSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAXKIVSD-----GNGMNAWVAWR 112

>pdb|1A2Y|C Chain C, Hen Egg White Lysozyme, D18a Mutant, In Complex With Mouse Monoclonal Antibody D1.3 Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 279 KRFGACELAKFLVRQRGIARR---DVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           K FG CELA  + R  G+A      +  WVC A  ESN N+ A + +N +GS D+GI QI
Sbjct: 1   KVFGRCELAAAMKRH-GLANYRGYSLGNWVCAAKFESNFNTQA-TNRNTDGSTDYGILQI 58
Query: 336 NDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH 392
           N ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  + 
Sbjct: 59  NSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAWR 112

>pdb|1FLW|A Chain A, Hen Egg White Lysozyme Mutant With Alanine Substituted For Glycine Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCT-ASGPAGKE-CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC     PA +  C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPASRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1BQL|Y Chain Y, Structure Of An Anti-Hel Fab Fragment Complexed With Bobwhite Quail Lysozyme Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGKTPGSRNLCNIPCSALLSSDITATVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IR7|A Chain A, Im Mutant Of Lysozyme Length = 129

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNMPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|2IFF|Y Chain Y, Structure Of An Antibody-Lysozyme Complex: Effect Of A Conservative Mutation Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGKTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1KXX|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +  D   WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLNNYRGYSLGD---WVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1KXW|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +  D   WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYSLGD---WVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1UIA|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 127

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 279 KRFGACELA---KFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           K FG CELA   K L   RG +   +  WVC A  ESN N+ A + +N +GS D+GI QI
Sbjct: 1   KVFGRCELAAAMKGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGILQI 56
Query: 336 NDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH 392
           N ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  + 
Sbjct: 57  NSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAWR 110

>pdb|1HEP|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITATVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1LZG|A Chain A, Dissection Of Protein-Carbohydrate Interactions In Mutant Hen Egg- White Lysozyme Complexes And Their Hydrolytic Activity Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRFWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1JHL|A Chain A, Three-Dimensional Structure Of A Heteroclitic Antigen- Antibody Cross-Reaction Complex Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K +G CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVYGRCELAAAMKRMGLDNYRGYS---LGNWVCAAKFESNFNTGA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G +  CH  CS+   ++IT  V C  KI S      G+G  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSKNLCHIPCSALLSSDITASVNCAKKIVSD-----GDGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1FLQ|A Chain A, Hen Egg White Lysozyme Mutant With Alanine Substituted For Glycine Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1FBI|X Chain X, Crystal Structure Of A Cross-Reaction Complex Between Fab F9.13.7 And Guinea-Fowl Lysozyme Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+ + ++IT    C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALQSSDITATANCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1FDL|Y Chain Y, Crystallographic Refinement Of The Three-Dimensional Structure Of The Fab D1.3-Lysozyme Complex At 2.5- Angstroms Resolution Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1UIC|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRAGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1KXY|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLNNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1HEM|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITATVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1AT6|A Chain A, Hen Egg White Lysozyme With A Isoaspartate Residue Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSX-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1V7S|A Chain A, Triclinic Hen Lysozyme Crystallized At 313k From A D2o Solution Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1UID|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRFGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1LSG|A Chain A, Three-Dimensional Structure Of The Platelet Integrin Recognition Segment Of The Fibrinogen Gamma Chain Obtained By Carrier Protein-Driven Crystallization Length = 144

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 2   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 57
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 58  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 112
Query: 392 H 392
Sbjct: 113 R 113

>pdb|1LSN|A Chain A, Thermal Stability Determinants Of Chicken Egg-White Lysozyme Core Mutants: Hydrophobicity, Packing Volume And Conserved Buried Water Molecules Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITAAVNCAKKIVSN-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1UIF|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRVGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1UIE|A Chain A, Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRGGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|3QY4|A Chain A, Crystallization And In Situ Data Collection Of Lysozyme Using The Crystal Former Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSSNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1HEO|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IVM|A Chain A, Solution Structure Of Mouse Lysozyme M Length = 130

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 284 CELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWC 341
           CE A+ L R    G     +  WVC+A  ESN N+ A +   G+ S D+GIFQIN +YWC
Sbjct: 6   CEFARTLKRNGMAGYYGVSLADWVCLAQHESNYNTRATNYNRGDQSTDYGIFQINSRYWC 65
Query: 342 T--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSK 399
               +  A   C   CS+   ++IT  + C  ++    Q     G +AW  +     N  
Sbjct: 66  NDGKTPRAVNACGINCSALLQDDITAAIQCAKRVVRDPQ-----GIRAWVAWRAHCQNRD 120
Query: 400 VSTY 403
           +S Y
Sbjct: 121 LSQY 124

>pdb|1IO5|A Chain A, Hydrogen And Hydration Of Hen Egg-White Lysozyme Determined By Neutron Diffraction Length = 129

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 281 FGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI QI
Sbjct: 3   FGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGILQI 58
Query: 336 NDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH 392
           N ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  + 
Sbjct: 59  NSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAWR 112

>pdb|1HEN|A Chain A, Structural And Thermodynamic Analysis Of Compensating Mutations Within The Core Of Chicken Egg White Lysozyme Length = 129

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITATVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IOS|A Chain A, Stabilization Of Hen Egg White Lysozyme By A Cavity-Filling Mutation Length = 129

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA    R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAFKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IR9|A Chain A, Im Mutant Of Lysozyme Length = 129

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  K+ S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKMVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1IR8|A Chain A, Im Mutant Of Lysozyme Length = 129

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           Q+N ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QMNSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1LSM|A Chain A, Thermal Stability Determinants Of Chicken Egg-White Lysozyme Core Mutants: Hydrophobicity, Packing Volume And Conserved Buried Water Molecules Length = 129

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGLL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITATVNCAKKIVSS-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1NDG|C Chain C, Crystal Structure Of Fab Fragment Of Antibody Hyhel-8 Complexed With Its Antigen Lysozyme Length = 129

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN  +WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSAWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1H6M|A Chain A, Covalent Glycosyl-Enzyme Intermediate Of Hen Egg White Lysozyme Length = 129

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  +SN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFQSNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1DZB|X Chain X, Crystal Structure Of Phage Library-Derived Single-Chain Fv Fragment 1f9 In Complex With Turkey Egg-White Lysozyme Length = 129

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K +G CELA  + R      RG +   +  WVC A  ESN N++A + +N +GS D+GI 
Sbjct: 1   KVYGRCELAAAMKRLGLDNYRGYS---LGNWVCAAKFESNFNTHA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G +  C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSKNLCNIPCSALLSSDITASVNCAKKIASG-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1HHL|A Chain A, The Three-Dimensional Structure Of Pheasant And Guinea-Fowl Egg Lysozymes Length = 129

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN NS A + +N +GS D+G+ 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNSQA-TNRNTDGSTDYGVL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+ + ++IT    C  KI S      G+G  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALQSSDITATANCAKKIVSD-----GDGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|3A3Q|A Chain A, Structure Of N59d Hen Egg-White Lysozyme In Complex With (Glcnac)3 Length = 129

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QI+ ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QIDSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|3OJP|A Chain A, D52n Mutant Of Hen Egg White Lysozyme (Hewl) Length = 129

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS ++GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTNYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1FLY|A Chain A, Hen Egg White Lysozyme Mutant With Alanine Substituted For Glycine Length = 129

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S       NG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDA-----NGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1NBZ|C Chain C, Crystal Structure Of Hyhel-63 Complexed With Hel Mutant K97a Length = 129

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C   I S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKAIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1LZ2|A Chain A, Crystallographic Study Of Turkey Egg-White Lysozyme And Its Complex With A Disaccharide Length = 129

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K +G CELA  + R      RG +   +  WVC A  ESN N++A + +N NGS D+GI 
Sbjct: 1   KVYGRCELAAAMKRLGLDNYRGYS---LGNWVCAAKFESNFNTHA-TNRNTNGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      G+G  AW  +
Sbjct: 57  QINSRWWCDNGRTPGSRNLCNIPCSALLSSDITASVNCAKKIASG-----GDGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1FN5|A Chain A, Hen Egg White Lysozyme Mutant With Alanine Substituted For Glycine Length = 129

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N + S D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDASTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|3OK0|A Chain A, E35a Mutant Of Hen Egg White Lysozyme (Hewl) Length = 129

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A   SN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFASNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S      GNG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD-----GNGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1AT5|A Chain A, Hen Egg White Lysozyme With A Succinimide Residue Length = 129

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN ++WC      G    C+  CS+   ++IT  V C  KI S       NG  AW  +
Sbjct: 57  QINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSXX-----NGMNAWVAW 111
Query: 392 H 392
Sbjct: 112 R 112

>pdb|1BB6|A Chain A, Lysozyme Complex With 4-Methyl-Umbelliferyl Chitotriose Length = 129

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K +  CELA+ L      G A   +P WVC++  ES+ N+ A + +N +GS D+GIFQIN
Sbjct: 1   KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQA-TNRNTDGSTDYGIFQIN 59
Query: 337 DKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            +YWC      G +  C  +CS    +++T  + C  ++         NG  AW  +   
Sbjct: 60  SRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDP-----NGIGAWVAWRLH 114
Query: 395 NTNSKVSTY 403
             N  + +Y
Sbjct: 115 CQNQDLRSY 123

>pdb|2Z2F|A Chain A, X-Ray Crystal Structure Of Bovine Stomach Lysozyme Length = 129

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L +    G     +  W+C+   ES+ N+ A +    + S D+GIFQIN
Sbjct: 1   KVFERCELARTLKKLGLDGYKGVSLANWLCLTKWESSYNTKATNYNPSSESTDYGIFQIN 60
Query: 337 DKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYC 394
            K+WC    +  A   CH  CS   +N+I   VAC   I S+       G  AW  +   
Sbjct: 61  SKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSE------QGITAWVAWKSH 114
Query: 395 NTNSKVSTY 403
             +  VS+Y
Sbjct: 115 CRDHDVSSY 123

>pdb|2BQN|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D  A   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAAAAAKRVVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2IHL|A Chain A, Lysozyme (e.c.3.2.1.17) (japanese Quail) Length = 129

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 279 KRFGACELAKFLVRQRGIARRD---VPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           K +G CELA  + R  G+ +     +  WVC A  ESN N+ A + +N +GS D+GI QI
Sbjct: 1   KVYGRCELAAAMKRH-GLDKYQGYSLGNWVCAAKFESNFNTQA-TNRNTDGSTDYGILQI 58
Query: 336 NDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH 392
           N ++WC      G    C+  CS+   ++IT  V C  KI S        G  AW  + 
Sbjct: 59  NSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDVH-----GMNAWVAWR 112

>pdb|2GV0|A Chain A, The Structure Of The Orthorhombic Form Of Soft-Shelled Turtle Lysozyme At 1.9 Angstroms Resolution Length = 131

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 278 GKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           GK +  CELA+   R    G     +  WVC A  ESN N+ A +   G+ S D+GI QI
Sbjct: 1   GKIYEQCELAREFKRHGMDGYHGYSLGDWVCTAKHESNFNTAATNYNRGDQSTDYGILQI 60
Query: 336 NDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-H 392
           N ++WC    +  A   C  +CS     +IT  V C  +I         NG  AW  +  
Sbjct: 61  NSRWWCNDGKTPKAKNACGIECSELLKADITAAVNCAKRIVRDP-----NGMGAWVAWTK 115
Query: 393 YC 394
           YC
Sbjct: 116 YC 117

>pdb|2BQO|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   +     Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRAVRDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|2BQG|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY 391
           QIN +YWC      G     H  CS+   +NI D VA   ++    Q     G +AW  +
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDNIADAVAAAKRVARDPQ-----GIRAWVAW 112
Query: 392 HYCNTNSKVSTY 403
                N  V  Y
Sbjct: 113 RNRCQNRDVRQY 124

>pdb|1HML|A Chain A, Alpha_lactalbumin Possesses A Distinct Zinc Binding Site Length = 142

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 276 IEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           I  K+F  CEL++ L    G     +P  +C     S  ++ A      N S ++G+FQI
Sbjct: 17  ILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENNESTEYGLFQI 74
Query: 336 NDKYWCTASG-PAGKE-CHAKCSSFEDNNITDDVACVVKI 373
           ++K WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 75  SNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI 114

>pdb|2BQF|A Chain A, Contribution Of Hydrophobic Effect To The Conformational Stability Of Human Lysozyme Length = 130

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 279 KRFGACELAKFLVR-----QRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K F  CELA+ L R      RGI+   +  W+C+A  ES  N+ A +   G+ S D+GIF
Sbjct: 1   KVFERCELARTLKRLGMDGYRGIS---LANWMCLAKWESGYNTRATNYNAGDRSTDYGIF 57
Query: 334 QINDKYWCTASGPAG--KECHAKCSSFEDNN 362
           QIN +YWC      G     H  CS+   +N
Sbjct: 58  QINSRYWCNDGKTPGAVNAAHLSCSALLQDN 88

>pdb|1HFZ|A Chain A, Alpha-Lactalbumin Length = 124

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           ++   CE+ + L   +G     +P WVC     S  ++ A      N S ++G+FQIN+K
Sbjct: 2   EQLTKCEVFRELKDLKGYGGVSLPEWVCTTFHTSGYDTQAIVQ--NNDSTEYGLFQINNK 59
Query: 339 YWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKI 373
            WC       +   C+  C  F D+++TDD+ CV KI
Sbjct: 60  IWCKDDQNPHSSNICNISCDKFLDDDLTDDIVCVKKI 96

>pdb|1F6R|A Chain A, Crystal Structure Of Apo-Bovine Alpha-Lactalbumin Length = 123

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           ++   CE+ + L   +G     +P WVC     S  ++ A      N S ++G+FQIN+K
Sbjct: 1   EQLTKCEVFRELKDLKGYGGVSLPEWVCTTFHTSGYDTQAIVQ--NNDSTEYGLFQINNK 58
Query: 339 YWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKI 373
            WC       +   C+  C  F D+++TDD+ CV KI
Sbjct: 59  IWCKDDQNPHSSNICNISCDKFLDDDLTDDIMCVKKI 95

>pdb|1FKV|A Chain A, Recombinant Goat Alpha-Lactalbumin T29i Length = 124

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 284 CELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTA 343
           CE+ + L   +      +P WVCIA   S  ++ A      N S ++G+FQIN+K WC  
Sbjct: 7   CEVFQKLKDLKDYGGVSLPEWVCIAFHTSGYDTQAIV--QNNDSTEYGLFQINNKIWCKD 64
Query: 344 -SGPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
              P  +  C+  C  F D+++TDD+ C  KI
Sbjct: 65  DQNPHSRNICNISCDKFLDDDLTDDIVCAKKI 96

>pdb|1FKQ|A Chain A, Recombinant Goat Alpha-Lactalbumin T29v Length = 124

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 284 CELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTA 343
           CE+ + L   +      +P WVC+A   S  ++ A      N S ++G+FQIN+K WC  
Sbjct: 7   CEVFQKLKDLKDYGGVSLPEWVCVAFHTSGYDTQAIV--QNNDSTEYGLFQINNKIWCKD 64
Query: 344 -SGPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
              P  +  C+  C  F D+++TDD+ C  KI
Sbjct: 65  DQNPHSRNICNISCDKFLDDDLTDDIVCAKKI 96

>pdb|2GOI|A Chain A, Crystal Structure Of Mouse Sperm C-Type Lysozyme-Like Protein 1 Length = 138

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 279 KRFGACELAKFL--VRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELAK +      G    ++  WVC+A   S  N+NA   +  +GS ++GIFQI+
Sbjct: 3   KVFSRCELAKEMHDFGLDGYRGYNLADWVCLAYYTSGFNTNAVDHE-ADGSTNNGIFQIS 61
Query: 337 DKYWCTASGPAGKE-CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGF-QAWSTYHYC 394
            + WC      G   C   C+   +N++ D + C +KI    Q   G G+ +AW   H+C
Sbjct: 62  SRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKI---VQEPLGLGYWEAWR--HHC 116
Query: 395 NTNSKVSTYDHAD 407
                    D  D
Sbjct: 117 QGRDLSDWVDGCD 129

>pdb|1A4V|A Chain A, Alpha-Lactalbumin Length = 123

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G     +P  +C     S  ++ A      N S ++G+FQI++K
Sbjct: 1   KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENNESTEYGLFQISNK 58
Query: 339 YWCTASG-PAGKE-CHAKCSSFEDNNITDDVACVVKI 373
            WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 59  LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI 95

>pdb|3B0I|A Chain A, Crystal Structure Of Recombinant Human Alpha Lactalbumin Length = 124

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G     +P  +C     S  ++ A      N S ++G+FQI++K
Sbjct: 2   KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENNESTEYGLFQISNK 59
Query: 339 YWCTASG-PAGKE-CHAKCSSFEDNNITDDVACVVKI 373
            WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 60  LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI 96

>pdb|1HMK|A Chain A, Recombinant Goat Alpha-Lactalbumin Length = 124

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 284 CELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTA 343
           CE+ + L   +      +P WVC A   S  ++ A      N S ++G+FQIN+K WC  
Sbjct: 7   CEVFQKLKDLKDYGGVSLPEWVCTAFHTSGYDTQAIV--QNNDSTEYGLFQINNKIWCKD 64
Query: 344 -SGPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
              P  +  C+  C  F D+++TDD+ C  KI
Sbjct: 65  DQNPHSRNICNISCDKFLDDDLTDDIVCAKKI 96

>pdb|1HFY|A Chain A, Alpha-Lactalbumin Length = 123

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 284 CELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTA 343
           CE+ + L   +      +P WVC A   S  ++ A      N S ++G+FQIN+K WC  
Sbjct: 6   CEVFQKLKDLKDYGGVSLPEWVCTAFHTSGYDTQAIV--QNNDSTEYGLFQINNKIWCKD 63
Query: 344 -SGPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
              P  +  C+  C  F D+++TDD+ C  KI
Sbjct: 64  DQNPHSRNICNISCDKFLDDDLTDDIVCAKKI 95

>pdb|3B0K|A Chain A, Crystal Structure Of Alpha-Lactalbumin Length = 123

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 284 CELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTA 343
           CE+ + L   +      +P WVC A   S  ++ A      N S ++G+FQIN+K WC  
Sbjct: 6   CEVFQKLKDLKDYGGVSLPEWVCTAFHTSGYDTQAIV--QNNDSTEYGLFQINNKIWCKD 63
Query: 344 -SGPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
              P  +  C+  C  F D+++TDD+ C  KI
Sbjct: 64  DQNPHSRNICNISCDKFLDDDLTDDIVCAKKI 95

>pdb|1ALC|A Chain A, Refined Structure Of Baboon Alpha-Lactalbumin At 1.7 Angstroms Resolution. Comparison With C-Type Lysozyme Length = 123

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G  R  +P  +C     S  ++ A      + S ++G+FQI++ 
Sbjct: 1   KQFTKCELSQNLYDIDGYGRIALPELICTMFHTSGYDTQAIV--ENDESTEYGLFQISNA 58
Query: 339 YWCTAS-GPAGKE-CHAKCSSFEDNNITDDVACVVKI 373
            WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 59  LWCKSSQSPQSRNICDITCDKFLDDDITDDIMCAKKI 95

>pdb|1B9O|A Chain A, Human Alpha-Lactalbumin, Low Temperature Form Length = 123

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G     +P  +C     S  ++ A      + S ++G+FQI++K
Sbjct: 1   KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENDESTEYGLFQISNK 58
Query: 339 YWCTASG-PAGKE-CHAKCSSFEDNNITDDVACVVKI 373
            WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 59  LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI 95

>pdb|3B0O|A Chain A, Crystal Structure Of Alpha-Lactalbumin Length = 123

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 280 RFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY 339
           +F  CEL++ L    G     +P  +C     S  ++ A      N S ++G+FQI++K 
Sbjct: 2   QFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENNESTEYGLFQISNKL 59
Query: 340 WCTASG-PAGKE-CHAKCSSFEDNNITDDVACVVKI 373
           WC +S  P  +  C   C  F D++ITDD+ C  KI
Sbjct: 60  WCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI 95

>pdb|1JUG|A Chain A, Lysozyme From Echidna Milk (Tachyglossus Aculeatus) Length = 125

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 285 ELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCT 342
           EL K LV Q   G     +P WVC A  ES+ N+ A +  N +GS D+GI QIN +YWC 
Sbjct: 7   ELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRA-TNHNTDGSTDYGILQINSRYWCH 65
Query: 343 ASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQ 378
                G +  C+  CS   D++ITDD+ C  KI  + +
Sbjct: 66  DGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK 103

>pdb|3ZVQ|A Chain A, Crystal Structure Of Proteolyzed Lysozyme Length = 70

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 279 KRFGACELAKFLVRQ-----RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIF 333
           K FG CELA  + R      RG +   +  WVC A  ESN N+ A + +N +GS D+GI 
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYS---LGNWVCAAKFESNFNTQA-TNRNTDGSTDYGIL 56
Query: 334 QINDKYWC 341
           QIN ++WC
Sbjct: 57  QINSRWWC 64

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDK 713
           NPC++   C+ + G     C CL+G T     C+ + +  CV+ NPCQN+ATC+   G+ 
Sbjct: 13  NPCEHAGKCINTLG--SFECQCLQGYT--GPRCEIDVNE-CVS-NPCQNDATCLDQIGEF 66
Query: 714 QITCLCLKGFEGPHRELPVESVDEPP 739
           Q  C+C+ G+EG H E+  +     P
Sbjct: 67  Q--CICMPGYEGVHCEVNTDECASSP 90

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDK 713
           NPC++   C+ + G     C CL+G T     C+ + +  CV+ NPCQN+ATC+   G+ 
Sbjct: 11  NPCEHAGKCINTLG--SFECQCLQGYT--GPRCEIDVNE-CVS-NPCQNDATCLDQIGEF 64
Query: 714 QITCLCLKGFEGPHRELPVESVDEPP 739
           Q  C+C+ G+EG H E+  +     P
Sbjct: 65  Q--CICMPGYEGVHCEVNTDECASSP 88

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	769
1iiz_A	120	Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCO	2e-31
1iiz_A	120	Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCO	1e-15
2fbd_A	122	Lysozyme 1; digestive lysozime, hydrolase; HET: PE	2e-30
2fbd_A	122	Lysozyme 1; digestive lysozime, hydrolase; HET: PE	8e-15
1qqy_A	130	Lysozyme C; APO-type protein, calcium binding lyso	3e-28
1qqy_A	130	Lysozyme C; APO-type protein, calcium binding lyso	4e-14
1hml_A	142	Alpha-lactalbumin; calcium-binding protein; 1.70A	5e-28
1hml_A	142	Alpha-lactalbumin; calcium-binding protein; 1.70A	3e-12
3b72_A	147	Lysozyme C; hen egg-white lysozyme, protein-SDS co	9e-28
3b72_A	147	Lysozyme C; hen egg-white lysozyme, protein-SDS co	8e-14
2gv0_A	131	Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}	2e-27
2gv0_A	131	Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}	2e-13
2goi_A	138	Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1	2e-27
2goi_A	138	Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1	2e-14
1yro_A	123	Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL com	2e-27
1yro_A	123	Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL com	1e-13
2nwd_X	130	Lysozyme C; native chemical ligation, chemical pro	8e-27
2nwd_X	130	Lysozyme C; native chemical ligation, chemical pro	4e-13
2z2f_A	129	Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylm	1e-26
2z2f_A	129	Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylm	8e-13
1b9o_A	123	Protein (alpha-lactalbumin); calcium-binding prote	1e-26
1b9o_A	123	Protein (alpha-lactalbumin); calcium-binding prote	6e-13
1jug_A	125	Lysozyme; calcium-binding; 1.90A {Tachyglossus acu	1e-26
1jug_A	125	Lysozyme; calcium-binding; 1.90A {Tachyglossus acu	8e-14
1lsg_A	144	Hen egg white lysozyme; fibrinogen, hybrid protein	3e-26
1lsg_A	144	Hen egg white lysozyme; fibrinogen, hybrid protein	5e-14
2vb1_A	129	Lysozyme C; antimicrobial, triclinic HEWL, atomic	5e-26
2vb1_A	129	Lysozyme C; antimicrobial, triclinic HEWL, atomic	9e-14
1lmq_A	129	Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.	8e-26
1lmq_A	129	Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.	6e-13
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	8e-14
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	8e-09
2vh0_B	134	Activated factor XA light chain; serine protease,	3e-13
2vh0_B	134	Activated factor XA light chain; serine protease,	3e-10
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	3e-12
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	4e-10
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	2e-06
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	6e-05
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	7e-04
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-11
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	2e-11
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	5e-09
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	8e-11
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	9e-07
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	1e-06
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	4e-09
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-08
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-08
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-08
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-04
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	2e-08
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	3e-08
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	5e-07
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	3e-04
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	6e-07
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	9e-06
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	2e-05
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	3e-04
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	4e-06
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	1e-05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	5e-06
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-05
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	3e-05
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	7e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	2e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	5e-04
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	4e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	4e-04
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	4e-04
2bou_A	143	EGF-like module containing mucin-like hormone rece	5e-04
1ob1_C	99	Major merozoite surface protein; immune system, im	5e-04

>1iiz_A Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCOP: d.2.1.2 PDB: 1gd6_A Length = 120

 Score =  117 bits (295), Expect = 2e-31
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           KRF  C L   L +Q G     +  WVC+   ES R ++  +  N NGSRD+G+FQINDK
Sbjct: 1   KRFTRCGLVNELRKQ-GFDENLMRDWVCLVENESARYTDKIANVNKNGSRDYGLFQINDK 59

Query: 339 YWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
           YWC+     GK+C+  CS    ++IT    C  KI+ +        F AWS + ++CN
Sbjct: 60  YWCSKGSTPGKDCNVTCSQLLTDDITVASTCAKKIYKR------TKFDAWSGWDNHCN 111

>1iiz_A Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCOP: d.2.1.2 PDB: 1gd6_A Length = 120

 Score = 72.7 bits (178), Expect = 1e-15
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGF 74
           GSRD+G+FQINDKYWC+     GK+C+  CS    ++IT    C  KI+ +        F
Sbjct: 47  GSRDYGLFQINDKYWCSKGSTPGKDCNVTCSQLLTDDITVASTCAKKIYKR------TKF 100

Query: 75  QAWSTY-HYCN 84
            AWS + ++CN
Sbjct: 101 DAWSGWDNHCN 111

>2fbd_A Lysozyme 1; digestive lysozime, hydrolase; HET: PEG; 1.90A {Musca domestica} PDB: 2h5z_A* 3cb7_A Length = 122

 Score =  115 bits (289), Expect = 2e-30
 Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K F  C LA+ +    G+ + ++P W CIA  ES+  +N   P N NGS D+GIFQIN+ 
Sbjct: 1   KTFTRCSLAREMYAL-GVPKSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINNY 59

Query: 339 YWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCN 395
           YWC  S    +  ECH  C +   +NI++ V C  KI SQ       G+ AWST+ YC+
Sbjct: 60  YWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQ------QGWTAWSTWKYCS 112

>2fbd_A Lysozyme 1; digestive lysozime, hydrolase; HET: PEG; 1.90A {Musca domestica} PDB: 2h5z_A* 3cb7_A Length = 122

 Score = 70.4 bits (172), Expect = 8e-15
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GIFQIN+ YWC  S    +  ECH  C +   +NI++ V C  KI SQ       
Sbjct: 47  GSNDYGIFQINNYYWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQ------Q 100

Query: 73  GFQAWSTYHYCN 84
           G+ AWST+ YC+
Sbjct: 101 GWTAWSTWKYCS 112

>1qqy_A Lysozyme C; APO-type protein, calcium binding lysozyme, enzyme, hydrolase; 1.85A {Canis lupus familiaris} SCOP: d.2.1.2 PDB: 1el1_A 1i56_A 2cwi_A 2z2e_A 2eql_A Length = 130

 Score =  109 bits (273), Expect = 3e-28
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L      G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 2   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 61

Query: 337 DKYWC-TASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
            K+WC + S  +   C+  CS F D+NI DD+AC  ++          G  AW  +  +C
Sbjct: 62  SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN-----GMSAWVAWVKHC 116

>1qqy_A Lysozyme C; APO-type protein, calcium binding lysozyme, enzyme, hydrolase; 1.85A {Canis lupus familiaris} SCOP: d.2.1.2 PDB: 1el1_A 1i56_A 2cwi_A 2z2e_A 2eql_A Length = 130

 Score = 68.9 bits (168), Expect = 4e-14
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 14  RGSRDHGIFQINDKYWC-TASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            GS D+GIFQ+N K+WC + S  +   C+  CS F D+NI DD+AC  ++          
Sbjct: 50  NGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN----- 104

Query: 73  GFQAWSTY-HYC 83
           G  AW  +  +C
Sbjct: 105 GMSAWVAWVKHC 116

>1hml_A Alpha-lactalbumin; calcium-binding protein; 1.70A {Homo sapiens} SCOP: d.2.1.2 Length = 142

 Score =  109 bits (272), Expect = 5e-28
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 11/135 (8%)

Query: 263 LLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPK 322
            + L    +L   I  K+F  CEL++ L    G     +P  +C     S  ++ A    
Sbjct: 4   FVPLFLVGILFPAILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVEN 63

Query: 323 NGNGSRDHGIFQINDKYWCTASG--PAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRA 380
             N S ++G+FQI++K WC +S    +   C   C  F D++ITDD+ C  KI       
Sbjct: 64  --NESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI---- 117

Query: 381 RGNGFQAWSTY-HYC 394
              G   W  +   C
Sbjct: 118 --KGIDYWLAHKALC 130

>1hml_A Alpha-lactalbumin; calcium-binding protein; 1.70A {Homo sapiens} SCOP: d.2.1.2 Length = 142

 Score = 64.0 bits (155), Expect = 3e-12
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%)

Query: 15  GSRDHGIFQINDKYWCTASG--PAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S ++G+FQI++K WC +S    +   C   C  F D++ITDD+ C  KI          
Sbjct: 65  ESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------K 118

Query: 73  GFQAWSTY-HYC 83
           G   W  +   C
Sbjct: 119 GIDYWLAHKALC 130

>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A* Length = 147

 Score =  108 bits (271), Expect = 9e-28
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 12/145 (8%)

Query: 264 LVLVYCTLLPRQIEGKRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSP 321
           L+++    LP    GK FG CELA  + R          +  WVC A  ESN N+ A + 
Sbjct: 4   LLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR 63

Query: 322 KNGNGSRDHGIFQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQR 379
            N +GS D+GI QIN ++WC      G    C+  CS+   ++IT  V C  KI S    
Sbjct: 64  -NTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN- 121

Query: 380 ARGNGFQAWSTY-HYCNTNSKVSTY 403
               G  AW  + + C   + V  +
Sbjct: 122 ----GMNAWVAWRNRCK-GTDVQAW 141

>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A* Length = 147

 Score = 68.6 bits (167), Expect = 8e-14
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN ++WC      G    C+  CS+   ++IT  V C  KI S        
Sbjct: 67  GSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN----- 121

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G  AW  + + C   + V  +
Sbjct: 122 GMNAWVAWRNRCK-GTDVQAW 141

>2gv0_A Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis} Length = 131

 Score =  107 bits (267), Expect = 2e-27
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 278 GKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
           GK +  CELA+   R    G     +  WVC A  ESN N+ A +   G+ S D+GI QI
Sbjct: 1   GKIYEQCELAREFKRHGMDGYHGYSLGDWVCTAKHESNFNTAATNYNRGDQSTDYGILQI 60

Query: 336 NDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-H 392
           N ++WC    +  A   C  +CS     +IT  V C  +I          G  AW  +  
Sbjct: 61  NSRWWCNDGKTPKAKNACGIECSELLKADITAAVNCAKRIVRDPN-----GMGAWVAWTK 115

Query: 393 YCNTNSKVSTY 403
           YC     VS +
Sbjct: 116 YCK-GKDVSQW 125

>2gv0_A Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis} Length = 131

 Score = 66.6 bits (162), Expect = 2e-13
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S D+GI QIN ++WC    +  A   C  +CS     +IT  V C  +I          
Sbjct: 51  QSTDYGILQINSRWWCNDGKTPKAKNACGIECSELLKADITAAVNCAKRIVRDPN----- 105

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G  AW  +  YC     VS +
Sbjct: 106 GMGAWVAWTKYCK-GKDVSQW 125

>2goi_A Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1, sperm C-type lysozyme-like protein 1, acrosomal sperm protein, sperm-egg binding, fertilization; 2.30A {Mus musculus} Length = 138

 Score =  107 bits (267), Expect = 2e-27
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 278 GKRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQI 335
            K F  CELAK +      G    ++  WVC+A   S  N+NA      +GS ++GIFQI
Sbjct: 2   AKVFSRCELAKEMHDFGLDGYRGYNLADWVCLAYYTSGFNTNAVDH-EADGSTNNGIFQI 60

Query: 336 NDKYWCTASGPAGK-ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
           + + WC      G   C   C+   +N++ D + C +KI  +       G   W  + H+
Sbjct: 61  SSRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKIVQEPL-----GLGYWEAWRHH 115

Query: 394 C 394
           C
Sbjct: 116 C 116

>2goi_A Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1, sperm C-type lysozyme-like protein 1, acrosomal sperm protein, sperm-egg binding, fertilization; 2.30A {Mus musculus} Length = 138

 Score = 69.7 bits (170), Expect = 2e-14
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGK-ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
           GS ++GIFQI+ + WC      G   C   C+   +N++ D + C +KI  +       G
Sbjct: 51  GSTNNGIFQISSRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKIVQEPL-----G 105

Query: 74  FQAWSTY-HYC 83
              W  + H+C
Sbjct: 106 LGYWEAWRHHC 116

>1yro_A Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL complex, transferase activator/transferase complex; HET: GDU UDP MES PG4; 1.90A {Mus musculus} SCOP: d.2.1.2 PDB: 1nhe_A* 1nkh_A* 1nmm_A* 1nqi_A* 1nwg_A* 1o23_A* 1oqm_A* 1pzy_A* 1nf5_A* 2fyc_A* 2fyd_A* Length = 123

 Score =  106 bits (265), Expect = 2e-27
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 280 RFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY 339
               C+++  +    G     +  W C+    S  ++ A      NGS ++G+FQI+D++
Sbjct: 2   ELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVVND--NGSTEYGLFQISDRF 59

Query: 340 WCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
           WC       +   C   C    D+ + DD+AC  KI +        G   W  Y   C
Sbjct: 60  WCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------KGIDYWKAYKPMC 111

>1yro_A Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL complex, transferase activator/transferase complex; HET: GDU UDP MES PG4; 1.90A {Mus musculus} SCOP: d.2.1.2 PDB: 1nhe_A* 1nkh_A* 1nmm_A* 1nqi_A* 1nwg_A* 1o23_A* 1oqm_A* 1pzy_A* 1nf5_A* 2fyc_A* 2fyd_A* Length = 123

 Score = 67.4 bits (164), Expect = 1e-13
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 9/72 (12%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS ++G+FQI+D++WC       +   C   C    D+ + DD+AC  KI +        
Sbjct: 46  GSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------K 99

Query: 73  GFQAWSTY-HYC 83
           G   W  Y   C
Sbjct: 100 GIDYWKAYKPMC 111

>2nwd_X Lysozyme C; native chemical ligation, chemical protein synthesis, convergent synthesis, hydrolase; 1.04A {Synthetic} SCOP: d.2.1.2 PDB: 1iwu_A 1iwv_A 1iww_A 1iwx_A 1iwy_A 1iwz_A 1iy3_A 1iy4_A 1iwt_A 1jwr_A 1lz1_A 1lzr_A* 1lzs_A* 1op9_B 1re2_A* 1rem_A* 1rex_A 1rey_A* 1rez_A* 1jsf_A ... Length = 130

 Score =  105 bits (262), Expect = 8e-27
 Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 10/121 (8%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  W+C+A  ES  N+ A +   G+ S D+GIFQIN
Sbjct: 1   KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60

Query: 337 DKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC    +  A   CH  CS+   +NI D VAC  ++    Q     G +AW  + + 
Sbjct: 61  SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115

Query: 394 C 394
           C
Sbjct: 116 C 116

>2nwd_X Lysozyme C; native chemical ligation, chemical protein synthesis, convergent synthesis, hydrolase; 1.04A {Synthetic} SCOP: d.2.1.2 PDB: 1iwu_A 1iwv_A 1iww_A 1iwx_A 1iwy_A 1iwz_A 1iy3_A 1iy4_A 1iwt_A 1jwr_A 1lz1_A 1lzr_A* 1lzs_A* 1op9_B 1re2_A* 1rem_A* 1rex_A 1rey_A* 1rez_A* 1jsf_A ... Length = 130

 Score = 65.8 bits (160), Expect = 4e-13
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S D+GIFQIN +YWC    +  A   CH  CS+   +NI D VAC  ++    Q     
Sbjct: 50  RSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ----- 104

Query: 73  GFQAWSTY-HYC 83
           G +AW  + + C
Sbjct: 105 GIRAWVAWRNRC 116

>2z2f_A Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylmuramidase C, bacteriolytic enzyme, hydrolase; 1.50A {Bos taurus} Length = 129

 Score =  104 bits (261), Expect = 1e-26
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L +    G     +  W+C+   ES+ N+ A +    + S D+GIFQIN
Sbjct: 1   KVFERCELARTLKKLGLDGYKGVSLANWLCLTKWESSYNTKATNYNPSSESTDYGIFQIN 60

Query: 337 DKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            K+WC           CH  CS   +N+I   VAC   I S+       G  AW  +  +
Sbjct: 61  SKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSE------QGITAWVAWKSH 114

Query: 394 C 394
           C
Sbjct: 115 C 115

>2z2f_A Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylmuramidase C, bacteriolytic enzyme, hydrolase; 1.50A {Bos taurus} Length = 129

 Score = 65.1 bits (158), Expect = 8e-13
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 9/72 (12%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGKE--CHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S D+GIFQIN K+WC           CH  CS   +N+I   VAC   I S+       
Sbjct: 50  ESTDYGIFQINSKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSE------Q 103

Query: 73  GFQAWSTY-HYC 83
           G  AW  +  +C
Sbjct: 104 GITAWVAWKSHC 115

>1b9o_A Protein (alpha-lactalbumin); calcium-binding protein, high resolution; 1.15A {Homo sapiens} SCOP: d.2.1.2 PDB: 1a4v_A 1alc_A 1hmk_A 1hfy_A 1f6r_A 1f6s_A 2g4n_A 1fkq_A 1fkv_A 1hfz_A 1hfx_A Length = 123

 Score =  104 bits (260), Expect = 1e-26
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G     +P  +C     S  ++ A      + S ++G+FQI++K
Sbjct: 1   KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVEN--DESTEYGLFQISNK 58

Query: 339 YWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
            WC       +   C   C  F D++ITDD+ C  KI          G   W  +   C
Sbjct: 59  LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALC 111

>1b9o_A Protein (alpha-lactalbumin); calcium-binding protein, high resolution; 1.15A {Homo sapiens} SCOP: d.2.1.2 PDB: 1a4v_A 1alc_A 1hmk_A 1hfy_A 1f6r_A 1f6s_A 2g4n_A 1fkq_A 1fkv_A 1hfz_A 1hfx_A Length = 123

 Score = 65.1 bits (158), Expect = 6e-13
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 9/73 (12%)

Query: 14  RGSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARG 71
             S ++G+FQI++K WC       +   C   C  F D++ITDD+ C  KI         
Sbjct: 45  DESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------ 98

Query: 72  NGFQAWSTY-HYC 83
            G   W  +   C
Sbjct: 99  KGIDYWLAHKALC 111

>1jug_A Lysozyme; calcium-binding; 1.90A {Tachyglossus aculeatus} SCOP: d.2.1.2 Length = 125

 Score =  104 bits (260), Expect = 1e-26
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K     EL K LV Q   G     +P WVC A  ES+ N+ A +  N +GS D+GI QIN
Sbjct: 1   KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNH-NTDGSTDYGILQIN 59

Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC       +   C+  CS   D++ITDD+ C  KI  + +     G   W  +   
Sbjct: 60  SRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK-----GLTPWVAWKSK 114

Query: 394 C 394
           C
Sbjct: 115 C 115

>1jug_A Lysozyme; calcium-binding; 1.90A {Tachyglossus aculeatus} SCOP: d.2.1.2 Length = 125

 Score = 67.8 bits (165), Expect = 8e-14
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN +YWC       +   C+  CS   D++ITDD+ C  KI  + +     
Sbjct: 49  GSTDYGILQINSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK----- 103

Query: 73  GFQAWSTY-HYC 83
           G   W  +   C
Sbjct: 104 GLTPWVAWKSKC 115

>1lsg_A Hen egg white lysozyme; fibrinogen, hybrid protein; 2.40A {Gallus gallus} SCOP: d.2.1.2 Length = 144

 Score =  104 bits (259), Expect = 3e-26
 Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 12/130 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K FG CELA  + R          +  WVC A  ESN N+ A +  N +GS D+GI QIN
Sbjct: 2   KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQIN 60

Query: 337 DKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            ++WC    +  +   C+  CS+   ++IT  V C  KI S        G  AW  + + 
Sbjct: 61  SRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN-----GMNAWVAWRNR 115

Query: 394 CNTNSKVSTY 403
           C   + V  +
Sbjct: 116 CK-GTDVQAW 124

>1lsg_A Hen egg white lysozyme; fibrinogen, hybrid protein; 2.40A {Gallus gallus} SCOP: d.2.1.2 Length = 144

 Score = 69.0 bits (168), Expect = 5e-14
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN ++WC    +  +   C+  CS+   ++IT  V C  KI S        
Sbjct: 50  GSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN----- 104

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G  AW  + + C   + V  +
Sbjct: 105 GMNAWVAWRNRCK-GTDVQAW 124

>2vb1_A Lysozyme C; antimicrobial, triclinic HEWL, atomic resolution, allergen, hydrolase, glycosidase, bacteriolytic enzyme; HET: EDO; 0.65A {Gallus gallus} SCOP: d.2.1.2 PDB: 194l_A 1aki_A 1azf_A 1b0d_A* 1b2k_A 1bgi_A 1bhz_A 1bvk_C 1bvx_A 1bwh_A 1bwi_A 1bwj_A 1c08_C 1c10_A 1dpw_A 1dpx_A 1dqj_C 1e8l_A 1f0w_A 1f10_A ... Length = 129

 Score =  102 bits (256), Expect = 5e-26
 Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 12/130 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K FG CELA  + R          +  WVC A  ESN N+ A +  N +GS D+GI QIN
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQIN 59

Query: 337 DKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            ++WC    +  +   C+  CS+   ++IT  V C  KI S        G  AW  + + 
Sbjct: 60  SRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN-----GMNAWVAWRNR 114

Query: 394 CNTNSKVSTY 403
           C   + V  +
Sbjct: 115 CK-GTDVQAW 123

>2vb1_A Lysozyme C; antimicrobial, triclinic HEWL, atomic resolution, allergen, hydrolase, glycosidase, bacteriolytic enzyme; HET: EDO; 0.65A {Gallus gallus} SCOP: d.2.1.2 PDB: 194l_A 1aki_A 1azf_A 1b0d_A* 1b2k_A 1bgi_A 1bhz_A 1bvk_C 1bvx_A 1bwh_A 1bwi_A 1bwj_A 1c08_C 1c10_A 1dpw_A 1dpx_A 1dqj_C 1e8l_A 1f0w_A 1f10_A ... Length = 129

 Score = 67.8 bits (165), Expect = 9e-14
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN ++WC    +  +   C+  CS+   ++IT  V C  KI S        
Sbjct: 49  GSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN----- 103

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G  AW  + + C   + V  +
Sbjct: 104 GMNAWVAWRNRCK-GTDVQAW 123

>1lmq_A Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.60A {Oncorhynchus mykiss} SCOP: d.2.1.2 PDB: 1bb7_A* 1lmc_A* 1bb6_A 1lmo_A* 1lmp_A* 1lmn_A* Length = 129

 Score =  102 bits (255), Expect = 8e-26
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K +  CELA+ L      G A   +P WVC++  ES+ N+ A +  N +GS D+GIFQIN
Sbjct: 1   KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNR-NTDGSTDYGIFQIN 59

Query: 337 DKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC    +  A   C  +CS    +++T  + C  ++          G  AW  +  +
Sbjct: 60  SRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN-----GIGAWVAWRLH 114

Query: 394 C 394
           C
Sbjct: 115 C 115

>1lmq_A Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.60A {Oncorhynchus mykiss} SCOP: d.2.1.2 PDB: 1bb7_A* 1lmc_A* 1bb6_A 1lmo_A* 1lmp_A* 1lmn_A* Length = 129

 Score = 65.5 bits (159), Expect = 6e-13
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCT--ASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GIFQIN +YWC    +  A   C  +CS    +++T  + C  ++          
Sbjct: 49  GSTDYGIFQINSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN----- 103

Query: 73  GFQAWSTY-HYC 83
           G  AW  +  +C
Sbjct: 104 GIGAWVAWRLHC 115

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 624 DGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKG--GTV 681
           +   SF C C + +TG  C+  +   CV+ NPCQN+ATC+   G+    C+C+ G  G  
Sbjct: 23  NTLGSFECQCLQGYTGPRCE-IDVNECVS-NPCQNDATCLDQIGE--FQCICMPGYEGV- 77

Query: 682 SSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
              +C+  N+  C + +PC +N  C+    +    C C  GF G  
Sbjct: 78  ---HCE-VNTDECAS-SPCLHNGRCLDKINE--FQCECPTGFTGHL 116

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 53.8 bits (130), Expect = 8e-09
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)

Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDK 713
           NPC++   C+ + G     C CL+G T     C+  +   CV+ NPCQN+ATC+   G+ 
Sbjct: 13  NPCEHAGKCINTLGS--FECQCLQGYT--GPRCE-IDVNECVS-NPCQNDATCLDQIGE- 65

Query: 714 QITCLCLKGFEGPH 727
              C+C+ G+EG H
Sbjct: 66  -FQCICMPGYEGVH 78

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 9/112 (8%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
             + +  +         +    C T +PCQN   C    G+   TC CL+G     + C+
Sbjct: 24  EVFEDSDKTNEFWNKYKDGDQ-CET-SPCQNQGKCKDGLGE--YTCTCLEGFE--GKNCE 77

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
                 C +L+    +  C        + C C +G+               P
Sbjct: 78  LFTRKLC-SLDNGDCDQFCHEEQNS--VVCSCARGYTLADNGKACIPTGPYP 126

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
           KDG   + C C E F G+ C+      C +L+    +  C        + C C +G T  
Sbjct: 57  KDGLGEYTCTCLEGFEGKNCELFTRKLC-SLDNGDCDQFCHEEQNS--VVCSCARGYT-- 111

Query: 683 SEYCQFENSAACVTLNPCQNNATC 706
                 +         PC      
Sbjct: 112 LADNG-KACIPTGP-YPCGKQTLE 133

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 31/122 (25%), Positives = 40/122 (32%), Gaps = 25/122 (20%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTL----------NPCQNNATCVASPGDKQI-----T 672
           SF C C + FT   C      A              NPC N  TC  S   +        
Sbjct: 22  SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81

Query: 673 CLCLKG--GTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL 730
           C C +G  G     +CQ  N   C    PC+N   C     +   +C C   F G + + 
Sbjct: 82  CKCPRGFNGI----HCQ-HNINECEV-EPCKNGGICTDLVAN--YSCECPGEFMGRNCQY 133

Query: 731 PV 732
             
Sbjct: 134 KG 135

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 15/88 (17%)

Query: 654 NPCQNNATCVASPGDKQITCLCLKGGT---------VSSEYCQFENSAACVTLNPCQNNA 704
           NPC+N   C+    D   +C C  G T         V+S+  +  ++  C   NPC N  
Sbjct: 6   NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTP-NPCHNGG 64

Query: 705 TCVASPGDKQI-----TCLCLKGFEGPH 727
           TC  S   +        C C +GF G H
Sbjct: 65  TCEISEAYRGDTFIGYVCKCPRGFNGIH 92

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 13/88 (14%)

Query: 616 QQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLC 675
           + + +   D  + + C C   F G +CQ  N   C    PC+N   C     +   +C C
Sbjct: 67  EISEAYRGDTFIGYVCKCPRGFNGIHCQ-HNINECEV-EPCKNGGICTDLVAN--YSCEC 122

Query: 676 LKGGTVSSEYCQFENSAACVTLNPCQNN 703
                     CQ++            ++
Sbjct: 123 PGE--FMGRNCQYK-------GGGHHHH 141

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 13/47 (27%), Positives = 18/47 (38%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPSEDET 744
           NPC+N   C+    D   +C C  GF  P+    VE   +       
Sbjct: 6   NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSA 52

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 4/33 (12%)

Query: 518 CAGRPCRNNGTCTPVSG----GVVNFTCTCPSG 546
           C   PC N GTC           + + C CP G
Sbjct: 55  CTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRG 87

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 9/112 (8%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
             + +  +         +    C T +PCQN   C    G+   TC CL+G     + C+
Sbjct: 24  EVFEDSDKTNEFWNKYKDGDQ-CET-SPCQNQGKCKDGLGE--YTCTCLEG--FEGKNCE 77

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
                 C   +    +  C        + C C +G+               P
Sbjct: 78  LFTRKLCSL-DNGDCDQFCHEEQNS--VVCSCARGYTLADNGKACIPTGPYP 126

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 18/103 (17%), Positives = 26/103 (25%), Gaps = 9/103 (8%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
           KDG   + C C E F G+ C+      C   +    +  C        + C C +G T  
Sbjct: 57  KDGLGEYTCTCLEGFEGKNCELFTRKLCSL-DNGDCDQFCHEEQNS--VVCSCARGYT-- 111

Query: 683 SEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEG 725
                 +         PC                     G   
Sbjct: 112 LADNG-KACIPTGP-YPCGKQTLERRKRSVA--QATSSSGEAP 150

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 55.9 bits (135), Expect = 5e-09
 Identities = 11/85 (12%), Positives = 20/85 (23%), Gaps = 7/85 (8%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
            +   S  C+C   +T      +         PC                     G    
Sbjct: 96  HEEQNSVVCSCARGYTLADNG-KACIPTGP-YPCGKQTLERRKRSVA--QATSSSGEAPD 151

Query: 683 SEYCQFENSAACVTLNPCQNNATCV 707
           S   +  +      L+P +N    +
Sbjct: 152 SITWKPYD---AADLDPTENPFDLL 173

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
              C C   + G YC       C+  +P   +  C          CLC        + C 
Sbjct: 82  PGDCRCQYGWQGLYCD-----KCIP-HPGCVHGICNEP-----WQCLCETNWG--GQLCD 128

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
            ++   C T  PC N  TC  + G  +  C C +G+ GP+
Sbjct: 129 -KDLNYCGTHQPCLNGGTCS-NTGPDKYQCSCPEGYSGPN 166

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 19/102 (18%), Positives = 28/102 (27%), Gaps = 22/102 (21%)

Query: 626 NLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEY 685
           + +    C E + G  C     A C        + +C          C C  G      Y
Sbjct: 47  DQNGNKTCMEGWMGPECN---RAICRQ-GCSPKHGSCKLPG-----DCRCQYGWQ--GLY 95

Query: 686 CQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           C       C+  +P   +  C          CLC   + G  
Sbjct: 96  CD-----KCIP-HPGCVHGICNEP-----WQCLCETNWGGQL 126

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 14/100 (14%), Positives = 23/100 (23%), Gaps = 20/100 (20%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
                C + + G  C                        G       C++G       C 
Sbjct: 16  RSAVTCDDYYYGFGCNKFCRP-----RDDFFGHYACDQNG----NKTCMEGWM--GPECN 64

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
               A C        + +C          C C  G++G +
Sbjct: 65  ---RAICRQ-GCSPKHGSCKLPG-----DCRCQYGWQGLY 95

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 27/112 (24%), Positives = 34/112 (30%), Gaps = 25/112 (22%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
             +C C   F G  C             C N  TC          C+C  G     E C+
Sbjct: 196 PGFCICPPGFYGVNCDK-----ANCSTTCFNGGTCFYPG-----KCICPPGLE--GEQCE 243

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
                      PC+N   C+         C C KG++G     P   V EP 
Sbjct: 244 I-----SKCPQPCRNGGKCIGKS-----KCKCSKGYQGDLCSKP---VCEPG 282

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 20/104 (19%), Positives = 28/104 (26%), Gaps = 22/104 (21%)

Query: 624 DGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSS 683
               +           + CQ    A C     C+N   C          C C  G     
Sbjct: 128 SEGNTILKTPQNAIFFKTCQ---QAEC--PGGCRNGGFCNERR-----ICECPDGFH--G 175

Query: 684 EYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
            +C+       +    C N   CV         C+C  GF G +
Sbjct: 176 PHCE-----KALCTPRCMNGGLCVTPG-----FCICPPGFYGVN 209

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 23/100 (23%), Positives = 30/100 (30%), Gaps = 22/100 (22%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
              C C     GE C+           PC+N   C+         C C KG     + C 
Sbjct: 228 PGKCICPPGLEGEQCEI-----SKCPQPCRNGGKCIGKS-----KCKCSKGYQ--GDLCS 275

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
                  V    C  + TC          C C +G+ G H
Sbjct: 276 KP-----VCEPGCGAHGTCHEPN-----KCQCQEGWHGRH 305

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 22/100 (22%), Positives = 28/100 (28%), Gaps = 22/100 (22%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
              C C + F G +C+       +    C N   CV         C+C  G       C 
Sbjct: 164 RRICECPDGFHGPHCE-----KALCTPRCMNGGLCVTPG-----FCICPPGFY--GVNCD 211

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
                       C N  TC          C+C  G EG  
Sbjct: 212 K-----ANCSTTCFNGGTCFYPG-----KCICPPGLEGEQ 241

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 21/117 (17%), Positives = 26/117 (22%), Gaps = 26/117 (22%)

Query: 616 QQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLC 675
                P K   +     C     G                       V +     I    
Sbjct: 92  LLGTVPHKASVVQVGFPCLGKQDG--------------VAAFEVDVIVMNSEGNTILKTP 137

Query: 676 LKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV 732
                   + CQ    A C     C+N   C          C C  GF GPH E  +
Sbjct: 138 QNAIF--FKTCQ---QAEC--PGGCRNGGFCNERR-----ICECPDGFHGPHCEKAL 182

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 17/111 (15%), Positives = 29/111 (26%), Gaps = 10/111 (9%)

Query: 629 FYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQF 688
            + N  +          +   C   NPC N   C          C C  G     + C+ 
Sbjct: 31  VFENTEKTNEFWKQY-VDGDQC-EPNPCLNGGLCKDDINS--YECWCQVGFE--GKNCEL 84

Query: 689 ENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
           + +  C   N          +     + C C  G+     +   +     P
Sbjct: 85  DAT--CNIKNGRCKQFCKTGADSK--VLCSCTTGYRLAPDQKSCKPAVPFP 131

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
           KD   S+ C C   F G+ C+ + +  C   N          +     + C C  G    
Sbjct: 63  KDDINSYECWCQVGFEGKNCELDAT--CNIKNGRCKQFCKTGADSK--VLCSCTTGYR-- 116

Query: 683 SEYCQFENSAACVTLNPCQNNATCVAS 709
               Q ++    V   PC   +   + 
Sbjct: 117 LAPDQ-KSCKPAVP-FPCGRVSVSHSP 141

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 19/114 (16%), Positives = 33/114 (28%), Gaps = 12/114 (10%)

Query: 629 FYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQF 688
            + +            +    C + +PCQN  +C          C CL         C+ 
Sbjct: 30  IFKDAERTKLFWISYSDGDQ-CAS-SPCQNGGSCKDQLQS--YICFCLPAFE--GRNCE- 82

Query: 689 ENSAACVTLNPCQN---NATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
            +    +     +N      C    G K  +C C +G+      +      E P
Sbjct: 83  THKDDQLI-CVNENGGCEQYCSDHTGTK-RSCRCHEGYSLLADGVSCTPTVEYP 134

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 18/87 (20%), Positives = 27/87 (31%), Gaps = 10/87 (11%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN---NATCVASPGDKQITCLCLKGG 679
           KD   S+ C C   F G  C+  +    +     +N      C    G K  +C C +G 
Sbjct: 62  KDQLQSYICFCLPAFEGRNCE-THKDDQLI-CVNENGGCEQYCSDHTGTK-RSCRCHEGY 118

Query: 680 TVSSEYCQFENSAACVTLNPCQNNATC 706
           +         +    V   PC      
Sbjct: 119 S--LLADG-VSCTPTVE-YPCGKIPIL 141

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 51.6 bits (123), Expect = 6e-07
 Identities = 27/126 (21%), Positives = 35/126 (27%), Gaps = 21/126 (16%)

Query: 626 NLSFYCNCTEDFTGEYCQ---------FENSAACVTLNPCQNNATCVASPGDKQITCLCL 676
             +  C C   F G  C+               C     C++   C+  P      C C 
Sbjct: 213 EDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPY----GCSCA 268

Query: 677 KG--GTVSSEYCQFENS-AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVE 733
            G  G   +E C        C     C N   C    G     CLC  G++G   E    
Sbjct: 269 TGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-----CLCSPGWQGLQCEREGI 323

Query: 734 SVDEPP 739
               P 
Sbjct: 324 PRMTPK 329

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 47.8 bits (113), Expect = 9e-06
 Identities = 21/107 (19%), Positives = 27/107 (25%), Gaps = 14/107 (13%)

Query: 628 SFYCNCTEDFTGEYCQFE-----NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
            + C+C   + G  C            C     C N   C    G     CLC  G    
Sbjct: 262 PYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-----CLCSPG--WQ 314

Query: 683 SEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
              C+ E      T            + G     C    G+  P  E
Sbjct: 315 GLQCEREGIPRM-TPKIVDLPDHIEVNSGKFNPICKA-SGWPLPTNE 359

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 22/106 (20%), Positives = 31/106 (29%), Gaps = 22/106 (20%)

Query: 629 FYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKG--GTVSSEYC 686
               C     G  C    +  C     C NN  C    G     C+C  G  G    + C
Sbjct: 185 IVRRCEAQKWGPEC----NHLC---TACMNNGVCHEDTG----ECICPPGFMGRTCEKAC 233

Query: 687 Q-----FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           +           C     C++   C+  P      C C  G++G  
Sbjct: 234 ELHTFGRTCKERCSGQEGCKSYVFCLPDPY----GCSCATGWKGLQ 275

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 42.8 bits (100), Expect = 3e-04
 Identities = 18/105 (17%), Positives = 27/105 (25%), Gaps = 20/105 (19%)

Query: 631 CNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKG--GTVSSEYCQF 688
                +    + Q +++      +          S   + I   C     G   +  C  
Sbjct: 148 VPDILEVHLPHAQPQDAGVY---SARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLC-- 202

Query: 689 ENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVE 733
                      C NN  C    G     C+C  GF G   E   E
Sbjct: 203 ---------TACMNNGVCHEDTG----ECICPPGFMGRTCEKACE 234

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 26/112 (23%), Positives = 36/112 (32%), Gaps = 12/112 (10%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLN--PCQNNATCVASPGDKQITCLCLKGGTVSSEY 685
           S+ C+C  DF     +      CV      C  +       GD    C    G  VS   
Sbjct: 23  SYICDCPPDFELNPTRVG----CVDTRSGNCYLDIRPRGDNGD--TACSNEIGVGVSKAS 76

Query: 686 CQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDE 737
           C      A     PC+       S    +I C   +GF      + +E +DE
Sbjct: 77  CCCSLGKAW--GTPCEMCPAVNTSEY--KILCPGGEGFRPNPITVILEDIDE 124

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 4e-06
 Identities = 74/448 (16%), Positives = 135/448 (30%), Gaps = 93/448 (20%)

Query: 61  KIHSQTQRARGNGFQAWSTYH--YCNTNSKVSTYYSSSFNCLVLICFLSCILK-SSTLNS 117
            I ++  R      + +        N N   + Y          +  L   LK    L  
Sbjct: 97  PIKTEQ-RQPSMMTRMYIEQRDRLYNDNQVFAKYN---------VSRLQPYLKLRQALLE 146

Query: 118 LRSLGGGFTGFHSGQMSGLARYGGVSPSTILCIKVSTLSRILIYI-FKI-W-----CKTH 170
           LR           G + G  +       T + + V    ++   + FKI W     C + 
Sbjct: 147 LRP--AKNVLID-G-VLGSGK-------TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 171 MA-LSRLTPRYLHVD-TYSKISDPIFTDRFRDRIWFLALLINLSSFFVSVPL--MLISL- 225
              L  L      +D  ++  SD     + R      ++   L     S P    L+ L 
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR----IHSIQAELRRLLKSKPYENCLLVLL 251

Query: 226 --EIFKELNGLNFRIKVFSHCRNEG-----RPQSAMHFSPIAACLLVLVYCTLLPRQIEG 278
             +  K  N  N   K+    R +         +  H S      L     TL P +++ 
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS------LDHHSMTLTPDEVKS 305

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVC---------IATKESNRNSNARSP--KNGNGS 327
                  L K+L        +D+P  V          IA  ES R+  A     K+ N  
Sbjct: 306 L------LLKYL----DCRPQDLPREVLTTNPRRLSIIA--ESIRDGLATWDNWKHVNCD 353

Query: 328 RDHGIFQINDKYWCTAS-GPAG-KECHAKCSSFEDN-NITDDVACVV--KIHSQTQRARG 382
           +   I +            PA  ++   + S F  + +I   +  ++   +         
Sbjct: 354 KLTTIIES-----SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 383 NGFQAWSTYHYCNTNSKVSTYDHADDMGEVSACACYMH---VNYLGSSLKLETVLMSSEK 439
           N    +S        S +S      ++         +H   V++       ++  +    
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 440 I---FISYSSTHHISKMANKFKFNLFKD 464
           +   F S+   HH+  + +  +  LF+ 
Sbjct: 469 LDQYFYSHIG-HHLKNIEHPERMTLFRM 495

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 22/107 (20%), Positives = 32/107 (29%), Gaps = 17/107 (15%)

Query: 628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
           S+   C ++ T    Q   S     L P            ++   C C  G       C 
Sbjct: 1   SYQVICRDEKTQMIYQQHQSW----LRPVLR--------SNRVEYCWCNSGRA----QCH 44

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVES 734
                +C     C N  TC  +       C C +GF G   E+   +
Sbjct: 45  SVPVKSCSE-PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 3/59 (5%)

Query: 620 SPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKG 678
            P+   N   YC C        C      +C     C N  TC  +       C C +G
Sbjct: 23  RPVLRSNRVEYCWCNSGRAQ--CHSVPVKSCSE-PRCFNGGTCQQALYFSDFVCQCPEG 78

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 6/94 (6%)

Query: 646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNAT 705
                   + C  + TC+   G    +C C  G      +CQ E S    +L+       
Sbjct: 12  LPLEHPCASLCCGHGTCIDGIGS--FSCDCRSGWE--GRFCQREVSFLNCSLDNGGCTHY 67

Query: 706 CVASPGDKQITCLCLKGFEGPHRELPVESVDEPP 739
           C+   G     C C  G++     L      + P
Sbjct: 68  CLEEVGW--RRCSCAPGYKLGDDLLQCHPAVKFP 99

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVS 682
            DG  SF C+C   + G +CQ E S    +L+       C+   G     C C  G  + 
Sbjct: 29  IDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGW--RRCSCAPGYKLG 86

Query: 683 SEYCQFENSAACVTLNPCQNNATCV 707
                       V   PC      +
Sbjct: 87  D--DL-LQCHPAVK-FPCGRPWKRM 107

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 46.6 bits (110), Expect = 3e-05
 Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 25/110 (22%)

Query: 631 CNCTEDFTGEYCQF-------ENSAACVTLN---PCQNNATCVASPGDKQITCLCLKG-- 678
           C C   + G  C+             C        C     C+         C+C     
Sbjct: 460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCG------QCVCHSSDF 513

Query: 679 GTVSSEYCQFEN-SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           G ++ +YC+ ++ S        C  +  C          CLC   + G +
Sbjct: 514 GKITGKYCECDDFSCVRYKGEMCSGHGQCSCG------DCLCDSDWTGYY 557

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 44.3 bits (104), Expect = 1e-04
 Identities = 20/100 (20%), Positives = 26/100 (26%), Gaps = 22/100 (22%)

Query: 631 CNCTEDFTGEYCQFENS---AACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ 687
           C C   F G  CQ E +           C     C  +       C C  G       C 
Sbjct: 540 CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN------VCECHSG--YQLPLC- 590

Query: 688 FENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
            +    C   +PC    +C              KG  G +
Sbjct: 591 -QECPGC--PSPCGKYISCAE-------CLKFEKGPFGKN 620

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 42.0 bits (98), Expect = 7e-04
 Identities = 17/103 (16%), Positives = 28/103 (27%), Gaps = 16/103 (15%)

Query: 631 CNCTEDFTGEYCQFEN-SAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFE 689
               +   G+YC+ +  +        C      +   G     C C  G       CQ E
Sbjct: 501 DVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFE--GSACQCE 554

Query: 690 NS---AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
            +           C     C  +       C C  G++ P  +
Sbjct: 555 RTTEGCLNPRRVECSGRGRCRCN------VCECHSGYQLPLCQ 591

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C   PC N G+C      + ++ C CP G +G+
Sbjct: 6   CESNPCLNGGSCK---DDINSYECWCPFGFEGK 35

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL 730
           NPC N  +C          C C  GFEG + EL
Sbjct: 9   NPCLNGGSCKDDINS--YECWCPFGFEGKNCEL 39

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 42.5 bits (99), Expect = 4e-04
 Identities = 20/98 (20%), Positives = 30/98 (30%), Gaps = 18/98 (18%)

Query: 631 CNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGT-VSSEYCQFE 689
           C C  + TG  C            P     + +  P        C+   + + +  C  E
Sbjct: 315 CECEHNTTGPDC--GKCKKNYQGRPWS-PGSYLPIPKGA--ANACIPSISSIGTNVCDNE 369

Query: 690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
                  L  CQN  TC  +     + CLC   + G  
Sbjct: 370 -------LLHCQNGGTCHNN-----VRCLCPAAYTGIL 395

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQS 551
           C  +PC +NG+C     G   +TCTC  G +G +
Sbjct: 8   CISQPCLHNGSCQDSIWG---YTCTCSPGYEGSN 38

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A Length = 95

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 18/79 (22%), Positives = 23/79 (29%), Gaps = 4/79 (5%)

Query: 649 ACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLN-PCQNNATCV 707
            C+  N    NA C       +    CL      +  C    +  C   N  C   A C 
Sbjct: 6   RCIDTN-VPENAACYRYLDGTE-EWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECK 63

Query: 708 ASPGDKQITCLCLKGFEGP 726
                 +I C C K    P
Sbjct: 64  -MNDKNEIVCKCTKEGSEP 81

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 22/128 (17%)

Query: 628 SFYCNCTEDFTGEYCQF-ENSAACV--------TLNPCQNNATCVASPGDKQITCLCLKG 678
           +  C C   F+            C         +   C   + C  + G     C+C  G
Sbjct: 18  ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGS--YDCVCSPG 75

Query: 679 --GTVSSEYCQFENSAACV-------TLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
                 ++  + E+   C          + C ++  C  + G    +C C  G++  H  
Sbjct: 76  YEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGS--YSCRCRPGWKPRHGI 133

Query: 730 LPVESVDE 737
              +    
Sbjct: 134 PNNQKDTV 141

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A Length = 99

 Score = 39.0 bits (90), Expect = 5e-04
 Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNP-CQNNATCVASPGD 712
             C  N+ C     +++  C CL       + C    +  C   N  C  +A C      
Sbjct: 10  KQCPQNSGCFRHLDERE-ECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSG 68

Query: 713 ---KQITCLCLKGFEGP 726
              K+ITC C K    P
Sbjct: 69  SNGKKITCECTKPDSYP 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	769
1hml_A	142	Alpha-lactalbumin; calcium-binding protein; 1.70A	100.0
1iiz_A	120	Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCO	100.0
1b9o_A	123	Protein (alpha-lactalbumin); calcium-binding prote	100.0
1yro_A	123	Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL com	100.0
1qqy_A	130	Lysozyme C; APO-type protein, calcium binding lyso	100.0
2goi_A	138	Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1	100.0
2gv0_A	131	Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}	100.0
2nwd_X	130	Lysozyme C; native chemical ligation, chemical pro	100.0
2z2f_A	129	Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylm	100.0
2fbd_A	122	Lysozyme 1; digestive lysozime, hydrolase; HET: PE	100.0
3b72_A	147	Lysozyme C; hen egg-white lysozyme, protein-SDS co	100.0
1lsg_A	144	Hen egg white lysozyme; fibrinogen, hybrid protein	100.0
2vb1_A	129	Lysozyme C; antimicrobial, triclinic HEWL, atomic	100.0
1jug_A	125	Lysozyme; calcium-binding; 1.90A {Tachyglossus acu	100.0
1lmq_A	129	Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.	100.0
1iiz_A	120	Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCO	99.94
1qqy_A	130	Lysozyme C; APO-type protein, calcium binding lyso	99.94
2goi_A	138	Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1	99.93
2gv0_A	131	Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}	99.93
2nwd_X	130	Lysozyme C; native chemical ligation, chemical pro	99.93
1b9o_A	123	Protein (alpha-lactalbumin); calcium-binding prote	99.93
2vb1_A	129	Lysozyme C; antimicrobial, triclinic HEWL, atomic	99.93
1yro_A	123	Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL com	99.93
2z2f_A	129	Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylm	99.93
1hml_A	142	Alpha-lactalbumin; calcium-binding protein; 1.70A	99.92
1lsg_A	144	Hen egg white lysozyme; fibrinogen, hybrid protein	99.92
2fbd_A	122	Lysozyme 1; digestive lysozime, hydrolase; HET: PE	99.92
3b72_A	147	Lysozyme C; hen egg-white lysozyme, protein-SDS co	99.92
1lmq_A	129	Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.	99.91
1jug_A	125	Lysozyme; calcium-binding; 1.90A {Tachyglossus acu	99.91
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.8
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.78
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.76
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.72
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.69
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.67
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.63
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.62
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.58
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.54
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.53
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.53
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.5
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.5
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.49
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.49
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.47
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.46
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.4
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.39
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.27
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.24
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.21
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.16
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.16
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.15
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.14
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.04
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.0
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.99
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.98
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.97
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.91
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.91
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.89
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.89
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.87
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.86
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.86
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.84
2vh0_B	134	Activated factor XA light chain; serine protease,	98.83
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.82
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.81
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.79
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.77
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.73
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.71
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.7
2vh0_B	134	Activated factor XA light chain; serine protease,	98.68
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.56
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.52
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.44
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.44
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.41
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.35
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.34
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.33
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.31
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.3
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.28
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.25
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.2
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.2
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.18
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.14
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.12
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.12
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.11
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.99
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.99
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.94
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.9
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.85
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.79
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.78
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.72
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.72
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.58
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.56
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.52
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.4
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.29
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.23
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.14
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.01
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.83
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.52
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.48
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.43
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.29
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.27
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.26
1ob1_C	99	Major merozoite surface protein; immune system, im	96.21
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.13
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.0
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	95.99
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.62
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	95.59
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	95.55
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	95.49
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	95.46
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	95.37
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	95.33
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	95.3
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.19
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	95.15
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	95.06
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	94.98
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	94.97
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.81
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	94.6
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	94.27
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	93.84
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.8
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.67
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.66
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	93.52
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	93.26
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.13
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	93.04
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	92.82
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	92.62
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	92.22
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	91.92
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	91.9
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	91.13
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	90.76
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	90.75
1szb_A	170	Mannose binding lectin-associated serine protease-	90.58
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	90.42
1gbs_A	185	Australian black SWAN egg white lysozyme; hydrolas	90.39
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	89.6
1ob1_C	99	Major merozoite surface protein; immune system, im	89.07
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	88.96
3gxr_A	187	Goose-type lysozyme 1; atlantic COD, FISH lysozyme	87.6
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	87.58
3t21_A	206	Endo-type membrane-bound lytic murein transglycos;	87.19
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	86.82
2wph_E	59	Coagulation factor IXA light chain; serine proteas	86.79
1szb_A	170	Mannose binding lectin-associated serine protease-	86.11
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	84.19
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	83.22
2wph_E	59	Coagulation factor IXA light chain; serine proteas	82.81
1nzi_A	159	Complement C1S component; calcium, innate immunity	80.85

>1hml_A Alpha-lactalbumin; calcium-binding protein; 1.70A {Homo sapiens} SCOP: d.2.1.2

Probab=100.00  E-value=2.3e-47  Score=362.63  Aligned_cols=119  Identities=32%  Similarity=0.640  Sum_probs=110.7

Q ss_pred             ccceeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--cccccc
Q psy9686         276 IEGKRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHA  353 (769)
Q Consensus       276 ~~ak~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~  353 (769)
                      ++||+|+||||||+|+..+||++++|++|||||++||+|||+|+++ | |||+|||||||||+|||++++.+  +|.|+|
T Consensus        17 ~~ak~~~rCeLar~L~~~~g~~~~~l~~WvCiA~~ES~~nt~a~n~-n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i   94 (142)
T 1hml_A           17 ILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVE-N-NESTEYGLFQISNKLWCKSSQVPQSRNICDI   94 (142)
T ss_dssp             ---CBCCHHHHHHHTGGGTTGGGCCHHHHHHHHHHHHTTBTTCEEE-C-SSCEEETTTTEETTTTSBCTTCTTCCCTTCS
T ss_pred             hccceechhHHHHHHHhccCCChhHHHHHHHHHHHhcCCCccCeeC-C-CCCcceeeeeechhhhcCCCCCCcccccCCC
Confidence            6899999999999999767999999999999999999999999997 6 99999999999999999988653  699999


Q ss_pred             ccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       354 ~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      +|++||||||+|||+|||+|+++      +||+||++|+ ||+|  ||++|.
T Consensus        95 ~C~dLl~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~l~~w~  138 (142)
T 1hml_A           95 SCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCTE--KLEQWL  138 (142)
T ss_dssp             BGGGGSSSCCHHHHHHHHHHHHH------TCGGGSTHHHHHSSS--SCGGGC
T ss_pred             CHHHHcCccHHHHHHHHHHHHHh------cCcchhHHHHHhCCC--CCcccc
Confidence            99999999999999999999998      6999999999 9999  799996

>1iiz_A Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCOP: d.2.1.2 PDB: 1gd6_A

Probab=100.00  E-value=1.9e-46  Score=347.26  Aligned_cols=116  Identities=39%  Similarity=0.781  Sum_probs=110.4

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCCccccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSF  358 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~~~~C~~~C~~l  358 (769)
                      |+|+||||||+|++ +||++++|++|||||++||+|||+|++++|.|||+|||||||||+|||++++.++|.|+|+|++|
T Consensus         1 k~~~rCeLar~L~~-~g~~~~~l~~WvCia~~ES~~nt~a~n~~n~dgS~dyGlFQINs~~WC~~g~~~~n~C~i~C~dL   79 (120)
T 1iiz_A            1 KRFTRCGLVNELRK-QGFDENLMRDWVCLVENESARYTDKIANVNKNGSRDYGLFQINDKYWCSKGSTPGKDCNVTCSQL   79 (120)
T ss_dssp             CBCCHHHHHHHHHH-TTCCGGGHHHHHHHHHHHTTTBSSCBCCCCSSSCCEETTTTEETTTTEESSSSCCSTTCEEGGGG
T ss_pred             CcccHhHHHHHHHH-cCCCccchhheeeeeehhhCCcccccccCCCCCccceeeeeechHhhhcCCCCCcCcCCCCHHHH
Confidence            79999999999997 69999999999999999999999999987889999999999999999998766789999999999


Q ss_pred             cCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccc
Q psy9686         359 EDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTY  403 (769)
Q Consensus       359 l~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~  403 (769)
                      |+|||++||+|||+|+++      +||+||++|+ ||+|  +|+..
T Consensus        80 l~ddI~~~v~CAk~I~~~------~G~~aW~~w~~~C~g--~l~~i  117 (120)
T 1iiz_A           80 LTDDITVASTCAKKIYKR------TKFDAWSGWDNHCNH--SNPDI  117 (120)
T ss_dssp             GSSSCHHHHHHHHHHHHH------HTTTTCHHHHHHSSS--CCCCC
T ss_pred             cCccHHHHHHHHHHHHHh------cCcchHHHHHhcCCC--CCCcC
Confidence            999999999999999998      5999999999 9999  78873

>1b9o_A Protein (alpha-lactalbumin); calcium-binding protein, high resolution; 1.15A {Homo sapiens} SCOP: d.2.1.2 PDB: 1a4v_A 1alc_A 1hmk_A 1hfy_A 1f6r_A 1f6s_A 2g4n_A 1fkq_A 1fkv_A 1hfz_A 1hfx_A

Probab=100.00  E-value=1.3e-45  Score=343.02  Aligned_cols=116  Identities=31%  Similarity=0.647  Sum_probs=110.2

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~C~  356 (769)
                      |+|+||||||+|+..+||++++|++|||||++||+|||+|+++ | |||+|||||||||+|||.+++.+  +|.|+|+|+
T Consensus         1 k~~~rCeLar~L~~~~g~~~~~l~~WvCiA~~ES~~nt~a~~~-n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i~C~   78 (123)
T 1b9o_A            1 KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVE-N-DESTEYGLFQISNKLWCKSSQVPQSRNICDISCD   78 (123)
T ss_dssp             CBCCHHHHHHHTGGGTTGGGCCHHHHHHHHHHHHTTBTTCEEE-C-SSCEEETTTTEETTTTSBCTTCTTCCCTTCSBGG
T ss_pred             CcCcHhHHHHHHHHccCCChhhhhhHHHhhhhhcCCCccCeeC-C-CCCcceeeEEecchhccCCCCCCcccCcCCCcHH
Confidence            7999999999999767999999999999999999999999997 6 99999999999999999987653  689999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      +||+|||++||+|||+|+++      +||+||++|+ +|+|  +|++|.
T Consensus        79 ~Ll~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~l~~w~  119 (123)
T 1b9o_A           79 KFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCTE--KLEQWL  119 (123)
T ss_dssp             GGGSSCCHHHHHHHHHHHHH------TTTHHHHTTCCTTCS--CGGGGS
T ss_pred             HHcCccHHHHHHHHHHHHHh------cCcchhHHHHhhCCC--CCcccc
Confidence            99999999999999999998      6999999999 9999  799996

>1yro_A Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL complex, transferase activator/transferase complex; HET: GDU UDP MES PG4; 1.90A {Mus musculus} SCOP: d.2.1.2 PDB: 1nhe_A* 1nkh_A* 1nmm_A* 1nqi_A* 1nwg_A* 1o23_A* 1oqm_A* 1pzy_A* 1nf5_A* 2fyc_A* 2fyd_A*

Probab=100.00  E-value=1.2e-45  Score=343.17  Aligned_cols=116  Identities=27%  Similarity=0.665  Sum_probs=110.0

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~C~  356 (769)
                      |+|+||||||+|+..+||++++|++|||||++||+|||+|+++ | |||+|||||||||+|||.+++.+  +|.|+|+|+
T Consensus         1 ~~~~rCeLar~L~~~~g~~~~~l~~WvCiA~~ES~~nt~a~n~-n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i~C~   78 (123)
T 1yro_A            1 TELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVVN-D-NGSTEYGLFQISDRFWCKSSEFPESENICGISCD   78 (123)
T ss_dssp             CBCCHHHHHHHTGGGTTGGGCCHHHHHHHHHHHHTTBTTCEEE-E-TTEEEETTTTEETTTTSBCSSCTTCCCTTCSBGG
T ss_pred             CcCcHhHHHHHHHHccCCChhhhhhhhhhhhhhcCCCccCeec-C-CCCcceeeEeechhhhcCCCCCCcccCcCCCcHH
Confidence            7899999999999767999999999999999999999999997 6 99999999999999999987643  689999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      +||+|||++||+|||+|+++      +||+||++|+ +|+|  +|++|.
T Consensus        79 dLl~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~l~~w~  119 (123)
T 1yro_A           79 KLLDDELDDDIACAKKILAI------KGIDYWKAYKPMCSE--KLEQWR  119 (123)
T ss_dssp             GGSSSCCHHHHHHHHHHHHH------TCGGGSTTHHHHSSS--CCGGGC
T ss_pred             HHcCccHHHHHHHHHHHHHh------cCcchhHHHHhhCCC--CCcccc
Confidence            99999999999999999998      6999999999 9999  799996

>1qqy_A Lysozyme C; APO-type protein, calcium binding lysozyme, enzyme, hydrolase; 1.85A {Canis lupus familiaris} SCOP: d.2.1.2 PDB: 1el1_A 1i56_A 2cwi_A 2z2e_A 2eql_A

Probab=100.00  E-value=7.4e-45  Score=341.95  Aligned_cols=125  Identities=38%  Similarity=0.754  Sum_probs=116.4

Q ss_pred             ceeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC-ccccccc
Q psy9686         278 GKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA-GKECHAK  354 (769)
Q Consensus       278 ak~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~-~~~C~~~  354 (769)
                      ||+|+||||||+|++.  +||++.+|++|||||++||+|||.|+++.|.|||+|||||||||+|||++++++ .+.|+|+
T Consensus         1 ~k~~~rCela~~L~~~g~~g~~~~~l~~wvcIA~~ES~~nt~Av~~~N~~gS~dyGLfQINs~~wC~~~~~~~~~~cgi~   80 (130)
T 1qqy_A            1 MKIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIM   80 (130)
T ss_dssp             CCBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEESSCSSSCCEETTTTEETTTTCBBTTBCCCCTTCSB
T ss_pred             CccccHhHHHHHHHHcCCCCCCccCHHHHHHHHHHHhCCCCcceecccCCCCceeeeeeechhhhcCCCCCcccccCCCC
Confidence            7999999999999974  478889999999999999999999999558899999999999999999988755 6899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      |++||||||++||+|||+|+++|     +||+||++|+ ||+|+ +|++|...|+
T Consensus        81 c~~Ll~d~i~~~v~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~i~~C~  129 (130)
T 1qqy_A           81 CSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAWVKHCKGK-DLSKYLASCN  129 (130)
T ss_dssp             GGGGGSSCCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTTS-CCTTTTTTSC
T ss_pred             HHHhccCchHHHHHHHHHHHccc-----ccccchHHHhccCCCC-CchHhhccCC
Confidence            99999999999999999999996     7999999999 99996 9999987665

>2goi_A Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1, sperm C-type lysozyme-like protein 1, acrosomal sperm protein, sperm-egg binding, fertilization; 2.30A {Mus musculus}

Probab=100.00  E-value=5.9e-45  Score=344.22  Aligned_cols=126  Identities=30%  Similarity=0.639  Sum_probs=114.1

Q ss_pred             ceeecchHHHHHHHHhcCC---CCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC-Ccccccc
Q psy9686         278 GKRFGACELAKFLVRQRGI---ARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP-AGKECHA  353 (769)
Q Consensus       278 ak~~~rCela~~l~~~~g~---~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~-~~~~C~~  353 (769)
                      ||+|+||||||+|++ .||   ++++|++|||||++||+|||.|+++ |+|||+||||||||++|||.++++ ++|.|+|
T Consensus         2 ak~~~rCeLAr~L~~-~g~~g~~~~~l~~Wvcia~~ES~~~t~av~~-n~~gs~dyGlfQINs~~WC~~~~~~~~n~C~i   79 (138)
T 2goi_A            2 AKVFSRCELAKEMHD-FGLDGYRGYNLADWVCLAYYTSGFNTNAVDH-EADGSTNNGIFQISSRRWCRTLASNGPNLCRI   79 (138)
T ss_dssp             CCBCCHHHHHHHHHH-TTCTTGGGCCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTSBCSSSCCCCTTCS
T ss_pred             CcCcchhHHHHHHHH-cCCCCCCcccHHHHHHHHHHHcCCCCcCeec-CCCCCceeeeeeecchhccCccCccccccCCC
Confidence            899999999999997 555   5688999999999999999999997 689999999999999999998754 4689999


Q ss_pred             ccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCcCc
Q psy9686         354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDMGE  411 (769)
Q Consensus       354 ~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~~~  411 (769)
                      +|++||||||++||+|||+|++++     +||+||++|+ +|+|+ +|++|...|.+.|
T Consensus        80 ~C~~Ll~ddI~~~i~CAkkI~~~~-----~G~~aW~~W~~~C~g~-~l~~~~~gC~~~~  132 (138)
T 2goi_A           80 YCTDLLNNDLKDSIVCAMKIVQEP-----LGLGYWEAWRHHCQGR-DLSDWVDGCDFLE  132 (138)
T ss_dssp             BGGGGGCSSCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTTS-CCGGGTTTCC---
T ss_pred             cHHHhcCccHHHHHHHHHHHHhcc-----ccCcccHHHhccCCCC-CchHHHccCcchh
Confidence            999999999999999999999985     7999999999 99996 9999987777765

>2gv0_A Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}

Probab=100.00  E-value=2.7e-44  Score=338.82  Aligned_cols=125  Identities=34%  Similarity=0.690  Sum_probs=115.0

Q ss_pred             ceeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--cccccc
Q psy9686         278 GKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHA  353 (769)
Q Consensus       278 ak~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~  353 (769)
                      ||+|+||||||+|++.  +||++.+|++|||||++||+|||.|+++++.|||+||||||||++|||++++++  ++.|+|
T Consensus         1 ak~~~rCela~~L~~~g~~~~~~~~l~~wvcIA~~ES~~nt~Av~~n~~~GS~dyGLfQINs~~wC~~~~~~~~~~~c~i   80 (131)
T 2gv0_A            1 GKIYEQCELAREFKRHGMDGYHGYSLGDWVCTAKHESNFNTAATNYNRGDQSTDYGILQINSRWWCNDGKTPKAKNACGI   80 (131)
T ss_dssp             CCBCCHHHHHHHHHHTTCTTGGGCCHHHHHHHHHHHHTTBTTCEEEETTTTEEEETTTTEETTTTSBCSCCTTCCCTTCC
T ss_pred             CcCccHhHHHHHHHHcCcCCCCccCHHHHHHHHHHHcCCCCcCeeccCCCCceeEeEEEeccccccCCCCCccccccCCC
Confidence            7999999999999974  367888999999999999999999999743499999999999999999988755  589999


Q ss_pred             ccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       354 ~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      +|++||||||++||+|||+|+++|     +||+||++|+ ||+|+ +|++|...|+
T Consensus        81 ~c~~Ll~d~i~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~i~~C~  130 (131)
T 2gv0_A           81 ECSELLKADITAAVNCAKRIVRDP-----NGMGAWVAWTKYCKGK-DVSQWIKGCK  130 (131)
T ss_dssp             BGGGGGSSCCHHHHHHHHHHHHST-----TGGGGSHHHHHHTTTS-CCGGGTTTCC
T ss_pred             CHHHHcCCchhHHHHHHHHHHhcc-----cCCchhHHHhccCCCC-CchHHhccCC
Confidence            999999999999999999999996     7999999999 99996 9999987765

>2nwd_X Lysozyme C; native chemical ligation, chemical protein synthesis, convergent synthesis, hydrolase; 1.04A {Synthetic} SCOP: d.2.1.2 PDB: 1iwu_A 1iwv_A 1iww_A 1iwx_A 1iwy_A 1iwz_A 1iy3_A 1iy4_A 1iwt_A 1jwr_A 1lz1_A 1lzr_A* 1lzs_A* 1op9_B 1re2_A* 1rem_A* 1rex_A 1rey_A* 1rez_A* 1jsf_A ...

Probab=100.00  E-value=5.7e-44  Score=335.95  Aligned_cols=124  Identities=35%  Similarity=0.722  Sum_probs=114.3

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |+|+||||||+|++.  +||++.+|++|||||++||+|||.|+++++.|||+||||||||++|||++++++  ++.|+|+
T Consensus         1 k~~~rCela~~L~~~g~~g~~~~~l~~wvcIA~~ES~~nt~Avn~n~~~gS~dyGLfQINs~~wC~~~~~~~l~~~cgi~   80 (130)
T 2nwd_X            1 KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLS   80 (130)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHSSBTTCEEEETTTTEEEETTTTEETTTTSBCSCSTTCCCTTCSB
T ss_pred             CcccHhHHHHHHHHcCCCCCCccCHHHHHHHHHHHcCCCCcCeeccCCCCCceeeeeeechhhhccCCCCcccccccCCC
Confidence            799999999999974  378889999999999999999999999743399999999999999999988755  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      |++||||||++||+|||+|+++|     +||+||++|+ +|+|+ +|++|...|+
T Consensus        81 c~~Ll~d~i~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~i~~C~  129 (130)
T 2nwd_X           81 CSALLQDNIADAVACAKRVVRDP-----QGIRAWVAWRNRCQNR-DVRQYVQGCG  129 (130)
T ss_dssp             GGGGGSSSCHHHHHHHHHHHHST-----TGGGGSHHHHHHTTTS-CCGGGTTTSC
T ss_pred             hhhhcCCchhHHHHHHHHHHhcc-----ccccchHHHhccCCCC-CchHhhccCC
Confidence            99999999999999999999996     7999999999 99996 9999987765

>2z2f_A Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylmuramidase C, bacteriolytic enzyme, hydrolase; 1.50A {Bos taurus}

Probab=100.00  E-value=6.3e-44  Score=335.23  Aligned_cols=123  Identities=35%  Similarity=0.695  Sum_probs=113.4

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |+|+||||||+|++.  +||++.+|++|||||++||+|||.|+++++.|||+||||||||++|||++++++  ++.|+|+
T Consensus         1 k~~~rCela~~L~~~g~~g~~~~~l~~wvciA~~ES~~nt~Av~~n~~~gS~dyGLfQINs~~wC~~~~~~~l~~~cgi~   80 (129)
T 2z2f_A            1 KVFERCELARTLKKLGLDGYKGVSLANWLCLTKWESSYNTKATNYNPSSESTDYGIFQINSKWWCNDGKTPNAVDGCHVS   80 (129)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEEETTTTEEEETTTTEETTTSSBCSCSSSCCCTTSSB
T ss_pred             CcCcHhHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCCCcCeeccCCCCCceeeeEeechhhhccCCCCcchhccCCCC
Confidence            799999999999974  478889999999999999999999999743399999999999999999988755  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      |++||||||++||+|||+|+++      +||+||++|+ ||+|+ +|++|...|+
T Consensus        81 c~~Ll~d~i~~~i~CAk~I~~~------~G~~aW~~w~~~C~g~-~l~~~i~~C~  128 (129)
T 2z2f_A           81 CSELMENDIAKAVACAKHIVSE------QGITAWVAWKSHCRDH-DVSSYVEGCT  128 (129)
T ss_dssp             GGGGGSSSTHHHHHHHHHHHHH------HCGGGCHHHHHHTTTS-CCGGGGTTCC
T ss_pred             cccccCcchhHHHHHHHHHHHh------cCcchhHHHhccCCCC-CchHhhccCC
Confidence            9999999999999999999998      5999999999 99996 9999987665

>2fbd_A Lysozyme 1; digestive lysozime, hydrolase; HET: PEG; 1.90A {Musca domestica} PDB: 2h5z_A* 3cb7_A

Probab=100.00  E-value=1.5e-43  Score=329.42  Aligned_cols=115  Identities=43%  Similarity=0.904  Sum_probs=108.0

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Cccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~C~  356 (769)
                      |+|+||||||+|++ +||++..|++|||||++||+|||+|++++|+|||+||||||||++|||.+++.  ++|.|+|+|+
T Consensus         1 k~~~rCela~~L~~-~g~~~~~L~~Wvcia~~ES~~nt~av~~~n~~gS~dyGlfQINs~~WC~~~~~~~~~n~C~i~C~   79 (122)
T 2fbd_A            1 KTFTRCSLAREMYA-LGVPKSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINNYYWCQPSNGRFSYNECHLSCD   79 (122)
T ss_dssp             CBCCHHHHHHHHHH-TTCCGGGHHHHHHHHHHHHTTBSSCBCCCCTTSCCEETTTTEETTTTSBCTTCCCCCCTTCSBGG
T ss_pred             CcccHhHHHHHHHH-cCCCHHHhccceeeeeeecCCCccceeccCCCCCeeeeEEeecchhhcCCCCCCCCCCcCCCCHH
Confidence            79999999999997 79999999999999999999999999987889999999999999999998764  4689999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCccccCCCCCcc
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKVST  402 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~~C~g~~~l~~  402 (769)
                      +||||||++||+|||+|+++      +||+||++|+||+|+  |+.
T Consensus        80 ~Ll~ddI~~~i~CAk~I~~~------~G~~aW~~w~~C~g~--l~~  117 (122)
T 2fbd_A           80 ALLTDNISNSVTCARKIKSQ------QGWTAWSTWKYCSGS--LPS  117 (122)
T ss_dssp             GGGSSSCHHHHHHHHHHHHH------HCGGGSTTHHHHSSC--CCC
T ss_pred             HHcCccHHHHHHHHHHHHHh------cCCccchhhhcCCCC--CCc
Confidence            99999999999999999998      699999999999993  665

>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A*

Probab=100.00  E-value=1.9e-43  Score=339.70  Aligned_cols=128  Identities=35%  Similarity=0.654  Sum_probs=114.9

Q ss_pred             ccccceeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--cc
Q psy9686         274 RQIEGKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GK  349 (769)
Q Consensus       274 ~~~~ak~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~  349 (769)
                      +.++||+|+|||||++|++.  +||++.++++|||||++||+|||.|+++ |.|||+||||||||++|||++++++  ++
T Consensus        14 ~~~~ak~~~rCela~~l~~~g~~~~~~~~~~~~~cIa~~ES~~nt~av~~-n~~gs~d~GlfQINs~~wC~~~~~~~~~~   92 (147)
T 3b72_A           14 LAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQINSRWWCNDGRTPGSRN   92 (147)
T ss_dssp             -----CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTCBCSCCTTCCC
T ss_pred             HhhceeeecccHHHHHHHHcCccccCCCCHHHHhHHHHHhcCCCCcCeec-CCCCCeeeeEEEeehhhhccccCCccccc
Confidence            34689999999999999974  3688999999999999999999999996 7899999999999999999988755  58


Q ss_pred             ccccccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         350 ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       350 ~C~~~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      .|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+|+ +|++|...|+
T Consensus        93 ~c~i~c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~~~~C~  146 (147)
T 3b72_A           93 LCNIPCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKGT-DVQAWIRGCR  146 (147)
T ss_dssp             TTCSBGGGGGSSSCHHHHHHHHHHHTSS-----SGGGGSHHHHHHTTTS-CGGGGGTTCC
T ss_pred             cCCCCHHHHcCCchHHHHHHHHHHHccc-----ccCcchHHHhccCCCC-CchHHhccCC
Confidence            9999999999999999999999999996     7999999999 99996 9999987765

>1lsg_A Hen egg white lysozyme; fibrinogen, hybrid protein; 2.40A {Gallus gallus} SCOP: d.2.1.2

Probab=100.00  E-value=1.9e-42  Score=329.96  Aligned_cols=125  Identities=35%  Similarity=0.666  Sum_probs=115.8

Q ss_pred             ceeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--cccccc
Q psy9686         278 GKRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHA  353 (769)
Q Consensus       278 ak~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~  353 (769)
                      ||+|+|||||++|++.  +||++.+|++|||||++||+|||.|+++ |.|||+||||||||++|||++++++  +|.|+|
T Consensus         1 ~k~~~rCeLAr~L~~~g~~g~~~~~l~~wvcIa~~ES~~nt~av~~-n~~gs~dyGLfQINs~~wC~~g~~~~~~n~Cgi   79 (144)
T 1lsg_A            1 MKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQINSRWWCNDGRTPGSRNLCNI   79 (144)
T ss_dssp             CCBCCHHHHHHHHHTTTCTTBTTBCTHHHHHHHHHHHSSBTTCEEE-CTTSCEEETTTTEETTTTCBCSCSTTCCCTTCC
T ss_pred             CcccchhHHHHHHHHcCcCCCCCcCHHHhhHHHHHhcCCCCcCeec-CCCCCeeeeeeeecHHHhcccCCCccccccCCC
Confidence            7999999999999974  4788899999999999999999999997 6899999999999999999988765  599999


Q ss_pred             ccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCc
Q psy9686         354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDM  409 (769)
Q Consensus       354 ~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~  409 (769)
                      +|++||||||++||+|||+|+++|     +||+||++|+ +|+|+ +|++|...|++
T Consensus        80 ~c~~Ll~ddI~~~i~CAk~I~~~~-----~G~~aW~~W~~~C~g~-~l~~~i~~C~~  130 (144)
T 1lsg_A           80 PCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKGT-DVQAWIRGCRL  130 (144)
T ss_dssp             BGGGSSSSSTHHHHHHHHHHTTSS-----SGGGGCHHHHHHTTTS-CGGGGGTTTTT
T ss_pred             CHHHHcCcchHHHHHHHHHHHccc-----ccccchHHHhccCCCC-CchHhhCcccc
Confidence            999999999999999999999996     7999999999 99996 99999866664

>2vb1_A Lysozyme C; antimicrobial, triclinic HEWL, atomic resolution, allergen, hydrolase, glycosidase, bacteriolytic enzyme; HET: EDO; 0.65A {Gallus gallus} SCOP: d.2.1.2 PDB: 194l_A 1aki_A 1azf_A 1b0d_A* 1b2k_A 1bgi_A 1bhz_A 1bvk_C 1bvx_A 1bwh_A 1bwi_A 1bwj_A 1c08_C 1c10_A 1dpw_A 1dpx_A 1dqj_C 1e8l_A 1f0w_A 1f10_A ...

Probab=100.00  E-value=2.2e-42  Score=324.98  Aligned_cols=123  Identities=36%  Similarity=0.679  Sum_probs=114.3

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |+|+|||||++|++.  +||++.++++|||||++||+|||.|+++ |.|||+||||||||++|||+++.++  ++.|+|+
T Consensus         1 k~~~rCela~~L~~~g~~g~~~~~l~~wv~ia~~ES~~~~~av~~-n~~gs~d~GlfQINs~~~C~~~~~~~~~~~c~i~   79 (129)
T 2vb1_A            1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIP   79 (129)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSB
T ss_pred             CcCcHhHHHHHHHHcCcCCCCCcCHHHhhHHHHHhcCCCCcCeec-CCCCCeeeeEeeechhhhcccCCCccccccCCCC
Confidence            799999999999974  3788899999999999999999999997 6899999999999999999988755  5999999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      |++||||||++||+|||+|+++|     +||+||++|+ ||+|+ +|++|...|+
T Consensus        80 c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~i~~C~  128 (129)
T 2vb1_A           80 CSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKGT-DVQAWIRGCR  128 (129)
T ss_dssp             GGGGGCSSCHHHHHHHHHHHHTT-----CCGGGCHHHHHHTTTS-CGGGGTTTCC
T ss_pred             HHHHcCcchHHHHHHHHHHHhcc-----ccCcchHHHhhhCCCC-CchHHhcCCC
Confidence            99999999999999999999996     7999999999 99996 9999987765

>1jug_A Lysozyme; calcium-binding; 1.90A {Tachyglossus aculeatus} SCOP: d.2.1.2

Probab=100.00  E-value=8.3e-42  Score=319.46  Aligned_cols=119  Identities=37%  Similarity=0.744  Sum_probs=111.3

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |+|+|||||++|++.  +||++.++++|||||++||+|||.|+++ |.|||+||||||||++|||++++++  ++.|+|+
T Consensus         1 k~~~rCela~~L~~~g~~~~~~~~l~~wvcia~~ES~~~~~av~~-n~~gs~d~GlfQINs~~~C~~~~~~~~~~~c~i~   79 (125)
T 1jug_A            1 KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNH-NTDGSTDYGILQINSRYWCHDGKTPGSKNACNIS   79 (125)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSB
T ss_pred             CcCcHhHHHHHHHHhCccCCCCcCHHHHHHHHHHHcCCCCcCeec-CCCCCeeeeeeeechhhhcccCCCccccccCCCC
Confidence            799999999999974  3788899999999999999999999997 6899999999999999999988755  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      |++||||||++||+|||+|+++|     +||+||++|+ ||+|+ +|++|.
T Consensus        80 c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~~  124 (125)
T 1jug_A           80 CSKLLDDDITDDLKCAKKIAGEA-----KGLTPWVAWKSKCRGH-DLSKFK  124 (125)
T ss_dssp             GGGGSSSCCHHHHHHHHHHHHHH-----TSSTTCHHHHHHTTTS-CCGGGC
T ss_pred             HHHHcCcchhHHHHHHHHHHccc-----cCCcchHHHhhhCCCC-Ccchhc
Confidence            99999999999999999999996     7999999999 99996 999994

>1lmq_A Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.60A {Oncorhynchus mykiss} SCOP: d.2.1.2 PDB: 1bb7_A* 1lmc_A* 1bb6_A 1lmo_A* 1lmp_A* 1lmn_A*

Probab=100.00  E-value=3.2e-41  Score=317.63  Aligned_cols=123  Identities=33%  Similarity=0.711  Sum_probs=114.1

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |+|+|||||++|++.  +||++.++++|||||++||+|||.|+++ |.|||+||||||||++|||.+++.+  .+.|+|+
T Consensus         1 k~~~rCela~~L~~~g~~~~~~~~~~~wvcia~~ES~~~t~av~~-n~~gs~DyGLfQINs~~wC~~~~~~~~~~~c~i~   79 (129)
T 1lmq_A            1 KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNR-NTDGSTDYGIFQINSRYWCDDGRTPGAKNVCGIR   79 (129)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTSCBCSCCTTCCCTTCSB
T ss_pred             CcCcHhHHHHHHHHcCccCCCCcCHHHHHHHHHHHcCCCCcCeec-CCCCCeeeeeeeechhhcccccCCccccccCCCC
Confidence            799999999999973  4788899999999999999999999997 6899999999999999999988654  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCC
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADD  408 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~  408 (769)
                      |++||||||+++|.|||+|+++|     +||+||++|+ ||+|+ +|++|...|+
T Consensus        80 c~~Ll~ddi~~~i~cA~~Il~~~-----~G~~aW~~w~~~C~g~-~l~~~~~~C~  128 (129)
T 1lmq_A           80 CSQLLTDDLTVAIRCAKRVVLDP-----NGIGAWVAWRLHCQNQ-DLRSYVAGCG  128 (129)
T ss_dssp             GGGGSSSSCHHHHHHHHHHTTST-----TGGGGCHHHHHHTTTS-CCGGGTTTSC
T ss_pred             hhHhccCchHHHHHHHHHHHhcc-----cccchHHHHhhhCCCC-CchHHhhcCC
Confidence            99999999999999999999996     7999999999 99997 9999987665

>1iiz_A Lysozyme; hydrolase; 2.40A {Antheraea mylitta} SCOP: d.2.1.2 PDB: 1gd6_A

Probab=99.94  E-value=4e-28  Score=224.73  Aligned_cols=76  Identities=43%  Similarity=0.855  Sum_probs=71.2

Q ss_pred             cCCCCccceEeeeCCcccCCCCCCCcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCCcc
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVS   90 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~~~   90 (769)
                      |+|||+|||||||||+|||++++.++|.|+|+|++||+|||++||+|||+|++++      ||+||++|+ ||+|  +|+
T Consensus        44 n~dgS~dyGlFQINs~~WC~~g~~~~n~C~i~C~dLl~ddI~~~v~CAk~I~~~~------G~~aW~~w~~~C~g--~l~  115 (120)
T 1iiz_A           44 NKNGSRDYGLFQINDKYWCSKGSTPGKDCNVTCSQLLTDDITVASTCAKKIYKRT------KFDAWSGWDNHCNH--SNP  115 (120)
T ss_dssp             CSSSCCEETTTTEETTTTEESSSSCCSTTCEEGGGGGSSSCHHHHHHHHHHHHHH------TTTTCHHHHHHSSS--CCC
T ss_pred             CCCCccceeeeeechHhhhcCCCCCcCcCCCCHHHHcCccHHHHHHHHHHHHHhc------CcchHHHHHhcCCC--CCC
Confidence            7899999999999999999988667899999999999999999999999999984      999999999 9997  898


Q ss_pred             cccccC
Q psy9686          91 TYYSSS   96 (769)
Q Consensus        91 ~~~~~~   96 (769)
                      + |++|
T Consensus       116 ~-i~~C  120 (120)
T 1iiz_A          116 D-ISSC  120 (120)
T ss_dssp             C-CTTC
T ss_pred             c-CCCC
Confidence            7 8776

>1qqy_A Lysozyme C; APO-type protein, calcium binding lysozyme, enzyme, hydrolase; 1.85A {Canis lupus familiaris} SCOP: d.2.1.2 PDB: 1el1_A 1i56_A 2cwi_A 2z2e_A 2eql_A

Probab=99.94  E-value=7.4e-28  Score=226.46  Aligned_cols=81  Identities=37%  Similarity=0.826  Sum_probs=75.6

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC-cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA-GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~-~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      .|+|||+|||||||||+|||++++++ .|.|+|+|++||+|||++||+|||+|+++|     +||+||++|+ ||+| ++
T Consensus        47 ~N~~gS~dyGLfQINs~~wC~~~~~~~~~~cgi~c~~Ll~d~i~~~v~CAk~I~~~~-----~G~~aW~~w~~~C~g-~~  120 (130)
T 1qqy_A           47 RNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAWVKHCKG-KD  120 (130)
T ss_dssp             SCSSSCCEETTTTEETTTTCBBTTBCCCCTTCSBGGGGGSSCCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTT-SC
T ss_pred             ccCCCCceeeeeeechhhhcCCCCCcccccCCCCHHHhccCchHHHHHHHHHHHccc-----ccccchHHHhccCCC-CC
Confidence            48899999999999999999998754 699999999999999999999999999997     4999999999 9997 79


Q ss_pred             cccccccCc
Q psy9686          89 VSTYYSSSF   97 (769)
Q Consensus        89 ~~~~~~~~~   97 (769)
                      |++||++|+
T Consensus       121 l~~~i~~C~  129 (130)
T 1qqy_A          121 LSKYLASCN  129 (130)
T ss_dssp             CTTTTTTSC
T ss_pred             chHhhccCC
Confidence            999998875

>2goi_A Sperm lysozyme-like protein 1; mouse SLLP1, MSLLP1, sperm C-type lysozyme-like protein 1, acrosomal sperm protein, sperm-egg binding, fertilization; 2.30A {Mus musculus}

Probab=99.93  E-value=1.1e-27  Score=226.38  Aligned_cols=82  Identities=24%  Similarity=0.630  Sum_probs=74.9

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCC-CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~-~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      .|.|||+|||||||||+|||.++++ ++|.|+|+|++||+|||++||+|||+|++++     +||+||++|+ +|+| ++
T Consensus        47 ~n~~gs~dyGlfQINs~~WC~~~~~~~~n~C~i~C~~Ll~ddI~~~i~CAkkI~~~~-----~G~~aW~~W~~~C~g-~~  120 (138)
T 2goi_A           47 HEADGSTNNGIFQISSRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKIVQEP-----LGLGYWEAWRHHCQG-RD  120 (138)
T ss_dssp             ECTTSCEEETTTTEETTTTSBCSSSCCCCTTCSBGGGGGCSSCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTT-SC
T ss_pred             cCCCCCceeeeeeecchhccCccCccccccCCCcHHHhcCccHHHHHHHHHHHHhcc-----ccCcccHHHhccCCC-CC
Confidence            4789999999999999999998764 4699999999999999999999999999986     4999999999 9997 79


Q ss_pred             cccccccCcc
Q psy9686          89 VSTYYSSSFN   98 (769)
Q Consensus        89 ~~~~~~~~~~   98 (769)
                      |++||+||.-
T Consensus       121 l~~~~~gC~~  130 (138)
T 2goi_A          121 LSDWVDGCDF  130 (138)
T ss_dssp             CGGGTTTCC-
T ss_pred             chHHHccCcc
Confidence            9999988863

>2gv0_A Lysozyme C; hydrolase; 1.90A {Pelodiscus sinensis}

Probab=99.93  E-value=2.4e-27  Score=223.48  Aligned_cols=80  Identities=31%  Similarity=0.693  Sum_probs=74.3

Q ss_pred             cC-CCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          12 DC-RGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        12 ~~-~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      |. |||+||||||||++|||++++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        47 n~~~GS~dyGLfQINs~~wC~~~~~~~~~~~c~i~c~~Ll~d~i~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~  120 (131)
T 2gv0_A           47 NRGDQSTDYGILQINSRWWCNDGKTPKAKNACGIECSELLKADITAAVNCAKRIVRDP-----NGMGAWVAWTKYCKG-K  120 (131)
T ss_dssp             ETTTTEEEETTTTEETTTTSBCSCCTTCCCTTCCBGGGGGSSCCHHHHHHHHHHHHST-----TGGGGSHHHHHHTTT-S
T ss_pred             cCCCCceeEeEEEeccccccCCCCCccccccCCCCHHHHcCCchhHHHHHHHHHHhcc-----cCCchhHHHhccCCC-C
Confidence            55 99999999999999999998754  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       121 ~l~~~i~~C~  130 (131)
T 2gv0_A          121 DVSQWIKGCK  130 (131)
T ss_dssp             CCGGGTTTCC
T ss_pred             CchHHhccCC
Confidence            9999998875

>2nwd_X Lysozyme C; native chemical ligation, chemical protein synthesis, convergent synthesis, hydrolase; 1.04A {Synthetic} SCOP: d.2.1.2 PDB: 1iwu_A 1iwv_A 1iww_A 1iwx_A 1iwy_A 1iwz_A 1iy3_A 1iy4_A 1iwt_A 1jwr_A 1lz1_A 1lzr_A* 1lzs_A* 1op9_B 1re2_A* 1rem_A* 1rex_A 1rey_A* 1rez_A* 1jsf_A ...

Probab=99.93  E-value=2.9e-27  Score=222.41  Aligned_cols=80  Identities=34%  Similarity=0.758  Sum_probs=74.4

Q ss_pred             cC-CCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          12 DC-RGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        12 ~~-~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      |. |||+|||||||||+|||++++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        46 n~~~gS~dyGLfQINs~~wC~~~~~~~l~~~cgi~c~~Ll~d~i~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~  119 (130)
T 2nwd_X           46 NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDP-----QGIRAWVAWRNRCQN-R  119 (130)
T ss_dssp             ETTTTEEEETTTTEETTTTSBCSCSTTCCCTTCSBGGGGGSSSCHHHHHHHHHHHHST-----TGGGGSHHHHHHTTT-S
T ss_pred             cCCCCCceeeeeeechhhhccCCCCcccccccCCChhhhcCCchhHHHHHHHHHHhcc-----ccccchHHHhccCCC-C
Confidence            55 99999999999999999998854  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       120 ~l~~~i~~C~  129 (130)
T 2nwd_X          120 DVRQYVQGCG  129 (130)
T ss_dssp             CCGGGTTTSC
T ss_pred             CchHhhccCC
Confidence            9999998875

>1b9o_A Protein (alpha-lactalbumin); calcium-binding protein, high resolution; 1.15A {Homo sapiens} SCOP: d.2.1.2 PDB: 1a4v_A 1alc_A 1hmk_A 1hfy_A 1f6r_A 1f6s_A 2g4n_A 1fkq_A 1fkv_A 1hfz_A 1hfx_A

Probab=99.93  E-value=5.6e-27  Score=217.95  Aligned_cols=73  Identities=33%  Similarity=0.756  Sum_probs=68.8

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      | |||+|||||||||+|||.+++.  ++|.|+|+|++||+|||++||+|||+|+++      +||+||++|+ ||+|  +
T Consensus        44 n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~  114 (123)
T 1b9o_A           44 N-DESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCTE--K  114 (123)
T ss_dssp             C-SSCEEETTTTEETTTTSBCTTCTTCCCTTCSBGGGGGSSCCHHHHHHHHHHHHH------TTTHHHHTTCCTTCS--C
T ss_pred             C-CCCcceeeEEecchhccCCCCCCcccCcCCCcHHHHcCccHHHHHHHHHHHHHh------cCcchhHHHHhhCCC--C
Confidence            6 9999999999999999998874  369999999999999999999999999998      4999999999 9997  8


Q ss_pred             ccccc
Q psy9686          89 VSTYY   93 (769)
Q Consensus        89 ~~~~~   93 (769)
                      |++||
T Consensus       115 l~~w~  119 (123)
T 1b9o_A          115 LEQWL  119 (123)
T ss_dssp             GGGGS
T ss_pred             Ccccc
Confidence            99999

>2vb1_A Lysozyme C; antimicrobial, triclinic HEWL, atomic resolution, allergen, hydrolase, glycosidase, bacteriolytic enzyme; HET: EDO; 0.65A {Gallus gallus} SCOP: d.2.1.2 PDB: 194l_A 1aki_A 1azf_A 1b0d_A* 1b2k_A 1bgi_A 1bhz_A 1bvk_C 1bvx_A 1bwh_A 1bwi_A 1bwj_A 1c08_C 1c10_A 1dpw_A 1dpx_A 1dqj_C 1e8l_A 1f0w_A 1f10_A ...

Probab=99.93  E-value=6.3e-27  Score=220.04  Aligned_cols=81  Identities=32%  Similarity=0.695  Sum_probs=75.3

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+||||||||++|||++++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        45 ~n~~gs~d~GlfQINs~~~C~~~~~~~~~~~c~i~c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~  118 (129)
T 2vb1_A           45 RNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKG-T  118 (129)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSBGGGGGCSSCHHHHHHHHHHHHTT-----CCGGGCHHHHHHTTT-S
T ss_pred             cCCCCCeeeeEeeechhhhcccCCCccccccCCCCHHHHcCcchHHHHHHHHHHHhcc-----ccCcchHHHhhhCCC-C
Confidence            47899999999999999999988754  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       119 ~l~~~i~~C~  128 (129)
T 2vb1_A          119 DVQAWIRGCR  128 (129)
T ss_dssp             CGGGGTTTCC
T ss_pred             CchHHhcCCC
Confidence            9999998875

>1yro_A Alpha-lactalbumin; Arg228Lys mutation, UDP-GAL complex, transferase activator/transferase complex; HET: GDU UDP MES PG4; 1.90A {Mus musculus} SCOP: d.2.1.2 PDB: 1nhe_A* 1nkh_A* 1nmm_A* 1nqi_A* 1nwg_A* 1o23_A* 1oqm_A* 1pzy_A* 1nf5_A* 2fyc_A* 2fyd_A*

Probab=99.93  E-value=5.5e-27  Score=218.04  Aligned_cols=73  Identities=34%  Similarity=0.840  Sum_probs=68.7

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      | |||+|||||||||+|||.+++.  ++|.|+|+|++||+|||++||+|||+|+++      +||+||++|+ ||+|  +
T Consensus        44 n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i~C~dLl~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~  114 (123)
T 1yro_A           44 D-NGSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------KGIDYWKAYKPMCSE--K  114 (123)
T ss_dssp             E-TTEEEETTTTEETTTTSBCSSCTTCCCTTCSBGGGGSSSCCHHHHHHHHHHHHH------TCGGGSTTHHHHSSS--C
T ss_pred             C-CCCcceeeEeechhhhcCCCCCCcccCcCCCcHHHHcCccHHHHHHHHHHHHHh------cCcchhHHHHhhCCC--C
Confidence            6 9999999999999999998764  359999999999999999999999999998      4999999999 9997  8


Q ss_pred             ccccc
Q psy9686          89 VSTYY   93 (769)
Q Consensus        89 ~~~~~   93 (769)
                      |++||
T Consensus       115 l~~w~  119 (123)
T 1yro_A          115 LEQWR  119 (123)
T ss_dssp             CGGGC
T ss_pred             Ccccc
Confidence            99999

>2z2f_A Lysozyme C-2; stomach lysozyme, 1,4-beta-N-acetylmuramidase C, bacteriolytic enzyme, hydrolase; 1.50A {Bos taurus}

Probab=99.93  E-value=6.1e-27  Score=219.95  Aligned_cols=79  Identities=37%  Similarity=0.756  Sum_probs=73.5

Q ss_pred             cC-CCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          12 DC-RGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        12 ~~-~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      |. |||+||||||||++|||++++++  +|.|+|+|++||+|||++||.|||+|+++      +||+||++|+ ||+| +
T Consensus        46 n~~~gS~dyGLfQINs~~wC~~~~~~~l~~~cgi~c~~Ll~d~i~~~i~CAk~I~~~------~G~~aW~~w~~~C~g-~  118 (129)
T 2z2f_A           46 NPSSESTDYGIFQINSKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSE------QGITAWVAWKSHCRD-H  118 (129)
T ss_dssp             ETTTTEEEETTTTEETTTSSBCSCSSSCCCTTSSBGGGGGSSSTHHHHHHHHHHHHH------HCGGGCHHHHHHTTT-S
T ss_pred             cCCCCCceeeeEeechhhhccCCCCcchhccCCCCcccccCcchhHHHHHHHHHHHh------cCcchhHHHhccCCC-C
Confidence            56 99999999999999999998854  59999999999999999999999999998      3999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       119 ~l~~~i~~C~  128 (129)
T 2z2f_A          119 DVSSYVEGCT  128 (129)
T ss_dssp             CCGGGGTTCC
T ss_pred             CchHhhccCC
Confidence            9999998875

>1hml_A Alpha-lactalbumin; calcium-binding protein; 1.70A {Homo sapiens} SCOP: d.2.1.2

Probab=99.92  E-value=8.4e-27  Score=221.64  Aligned_cols=73  Identities=33%  Similarity=0.759  Sum_probs=68.9

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      | |||+|||||||||+|||.+++.  ++|.|+|+|++||+|||++||+|||+|+++      +||+||++|+ ||+|  +
T Consensus        63 n-dgS~dyGLFQINs~~WC~~~~~~~~~n~C~i~C~dLl~ddI~~~i~CAk~I~~~------~G~~aW~~w~~~C~g--~  133 (142)
T 1hml_A           63 N-NESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCTE--K  133 (142)
T ss_dssp             C-SSCEEETTTTEETTTTSBCTTCTTCCCTTCSBGGGGSSSCCHHHHHHHHHHHHH------TCGGGSTHHHHHSSS--S
T ss_pred             C-CCCcceeeeeechhhhcCCCCCCcccccCCCCHHHHcCccHHHHHHHHHHHHHh------cCcchhHHHHHhCCC--C
Confidence            6 9999999999999999998874  369999999999999999999999999998      4999999999 9997  8


Q ss_pred             ccccc
Q psy9686          89 VSTYY   93 (769)
Q Consensus        89 ~~~~~   93 (769)
                      |++|+
T Consensus       134 l~~w~  138 (142)
T 1hml_A          134 LEQWL  138 (142)
T ss_dssp             CGGGC
T ss_pred             Ccccc
Confidence            99999

>1lsg_A Hen egg white lysozyme; fibrinogen, hybrid protein; 2.40A {Gallus gallus} SCOP: d.2.1.2

Probab=99.92  E-value=1e-26  Score=221.77  Aligned_cols=81  Identities=32%  Similarity=0.695  Sum_probs=74.8

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|.|||+||||||||++|||.+++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        46 ~n~~gs~dyGLfQINs~~wC~~g~~~~~~n~Cgi~c~~Ll~ddI~~~i~CAk~I~~~~-----~G~~aW~~W~~~C~g-~  119 (144)
T 1lsg_A           46 RNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKG-T  119 (144)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSCSTTCCCTTCCBGGGSSSSSTHHHHHHHHHHTTSS-----SGGGGCHHHHHHTTT-S
T ss_pred             cCCCCCeeeeeeeecHHHhcccCCCccccccCCCCHHHHcCcchHHHHHHHHHHHccc-----ccccchHHHhccCCC-C
Confidence            47899999999999999999998754  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       120 ~l~~~i~~C~  129 (144)
T 1lsg_A          120 DVQAWIRGCR  129 (144)
T ss_dssp             CGGGGGTTTT
T ss_pred             CchHhhCccc
Confidence            9999997755

>2fbd_A Lysozyme 1; digestive lysozime, hydrolase; HET: PEG; 1.90A {Musca domestica} PDB: 2h5z_A* 3cb7_A

Probab=99.92  E-value=1.3e-26  Score=215.54  Aligned_cols=77  Identities=43%  Similarity=0.932  Sum_probs=70.5

Q ss_pred             cCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCccccCCCCc
Q psy9686          12 DCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYHYCNTNSKV   89 (769)
Q Consensus        12 ~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~~C~~~~~~   89 (769)
                      |+|||+||||||||++|||.+++.  ++|.|+|+|++||+|||++||+|||+|+++      +||+||++|+||+|  +|
T Consensus        44 n~~gS~dyGlfQINs~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~~~i~CAk~I~~~------~G~~aW~~w~~C~g--~l  115 (122)
T 2fbd_A           44 NSNGSNDYGIFQINNYYWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQ------QGWTAWSTWKYCSG--SL  115 (122)
T ss_dssp             CTTSCCEETTTTEETTTTSBCTTCCCCCCTTCSBGGGGGSSSCHHHHHHHHHHHHH------HCGGGSTTHHHHSS--CC
T ss_pred             CCCCCeeeeEEeecchhhcCCCCCCCCCCcCCCCHHHHcCccHHHHHHHHHHHHHh------cCCccchhhhcCCC--CC
Confidence            789999999999999999998763  469999999999999999999999999998      39999999999998  57


Q ss_pred             ccccccCc
Q psy9686          90 STYYSSSF   97 (769)
Q Consensus        90 ~~~~~~~~   97 (769)
                      ++ |++||
T Consensus       116 ~~-i~~Cf  122 (122)
T 2fbd_A          116 PS-INDCF  122 (122)
T ss_dssp             CC-SGGGC
T ss_pred             Cc-cccCC
Confidence            77 88875

>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A*

Probab=99.92  E-value=3.6e-26  Score=219.74  Aligned_cols=81  Identities=32%  Similarity=0.695  Sum_probs=75.3

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+||||||||++|||++++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        63 ~n~~gs~d~GlfQINs~~wC~~~~~~~~~~~c~i~c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~  136 (147)
T 3b72_A           63 RNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKG-T  136 (147)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSCCTTCCCTTCSBGGGGGSSSCHHHHHHHHHHHTSS-----SGGGGSHHHHHHTTT-S
T ss_pred             cCCCCCeeeeEEEeehhhhccccCCccccccCCCCHHHHcCCchHHHHHHHHHHHccc-----ccCcchHHHhccCCC-C
Confidence            48899999999999999999988754  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       137 ~l~~~~~~C~  146 (147)
T 3b72_A          137 DVQAWIRGCR  146 (147)
T ss_dssp             CGGGGGTTCC
T ss_pred             CchHHhccCC
Confidence            9999998875

>1lmq_A Lysozyme; hydrolase (O-glycosyl); HET: NAG NDG; 1.60A {Oncorhynchus mykiss} SCOP: d.2.1.2 PDB: 1bb7_A* 1lmc_A* 1bb6_A 1lmo_A* 1lmp_A* 1lmn_A*

Probab=99.91  E-value=6.5e-26  Score=213.46  Aligned_cols=81  Identities=28%  Similarity=0.691  Sum_probs=75.1

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+||||||||++|||.+++.+  .|.|+|+|++||||||+++|.||++|++++     +||+||++|+ ||+| +
T Consensus        45 ~n~~gs~DyGLfQINs~~wC~~~~~~~~~~~c~i~c~~Ll~ddi~~~i~cA~~Il~~~-----~G~~aW~~w~~~C~g-~  118 (129)
T 1lmq_A           45 RNTDGSTDYGIFQINSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDP-----NGIGAWVAWRLHCQN-Q  118 (129)
T ss_dssp             ECTTSCEEETTTTEETTTSCBCSCCTTCCCTTCSBGGGGSSSSCHHHHHHHHHHTTST-----TGGGGCHHHHHHTTT-S
T ss_pred             cCCCCCeeeeeeeechhhcccccCCccccccCCCChhHhccCchHHHHHHHHHHHhcc-----cccchHHHHhhhCCC-C
Confidence            48899999999999999999988644  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||+||.
T Consensus       119 ~l~~~~~~C~  128 (129)
T 1lmq_A          119 DLRSYVAGCG  128 (129)
T ss_dssp             CCGGGTTTSC
T ss_pred             CchHHhhcCC
Confidence            9999999885

>1jug_A Lysozyme; calcium-binding; 1.90A {Tachyglossus aculeatus} SCOP: d.2.1.2

Probab=99.91  E-value=1e-25  Score=210.71  Aligned_cols=77  Identities=34%  Similarity=0.796  Sum_probs=71.9

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+||||||||++|||.+++++  +|.|+|+|++||||||++||+|||+|+++|     +||+||++|+ ||+| +
T Consensus        45 ~n~~gs~d~GlfQINs~~~C~~~~~~~~~~~c~i~c~~Ll~ddi~~~i~CAk~I~~~~-----~G~~aW~~w~~~C~g-~  118 (125)
T 1jug_A           45 HNTDGSTDYGILQINSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEA-----KGLTPWVAWKSKCRG-H  118 (125)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSBGGGGSSSCCHHHHHHHHHHHHHH-----TSSTTCHHHHHHTTT-S
T ss_pred             cCCCCCeeeeeeeechhhhcccCCCccccccCCCCHHHHcCcchhHHHHHHHHHHccc-----cCCcchHHHhhhCCC-C
Confidence            47899999999999999999988754  599999999999999999999999999996     4999999999 9997 7


Q ss_pred             Cccccc
Q psy9686          88 KVSTYY   93 (769)
Q Consensus        88 ~~~~~~   93 (769)
                      +|++||
T Consensus       119 ~l~~~~  124 (125)
T 1jug_A          119 DLSKFK  124 (125)
T ss_dssp             CCGGGC
T ss_pred             Ccchhc
Confidence            999998

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.80  E-value=7.4e-21  Score=189.54  Aligned_cols=152  Identities=20%  Similarity=0.415  Sum_probs=123.4

Q ss_pred             CCCCCCCCCcEEeeCCCCccceEeeCCCCCcCC---CCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCcc
Q psy9686         518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ---SGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLE  594 (769)
Q Consensus       518 C~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~---~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~  594 (769)
                      +.++||.+ |+|+++.++   |+|.|++||+|.   .|+++++|...                ....||           
T Consensus         8 ~~~~pC~n-g~C~~~~g~---~~C~C~~G~~g~~~~~C~~id~C~~~----------------~~~~~C-----------   56 (186)
T 1z1y_A            8 TVDTICXN-GQLVQMSNH---FXCMCNEGLVHLSENTCEEXNECXXE----------------TLGXAC-----------   56 (186)
T ss_dssp             CTTCCCBT-EEEEECSSC---EEEEECTTEEEEETTEEEECCCCSGG----------------GTTSEE-----------
T ss_pred             CCCCCCCC-CEeECCCCC---eEeECCCCCccCCCCccCCCCcccCC----------------CCCCCC-----------
Confidence            36789996 499999887   999999999887   78887777420                003344           


Q ss_pred             cccccccccccccceeeccccccCCCccccCC-----CCcccccCCCCCCCccccccccccccCCCCCCCCeEe----eC
Q psy9686         595 ITPVYLWLMKMKTLVMVQYYLQQNISPLKDGN-----LSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV----AS  665 (769)
Q Consensus       595 C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~-----gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCv----nt  665 (769)
                                            .++++|+++.     ++|.|.|++||.|..++.. +++|. ..+|.++++|+    +.
T Consensus        57 ----------------------~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~-~d~C~-~~~C~~~g~C~~~~~~~  112 (186)
T 1z1y_A           57 ----------------------GEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCV-LDVCQ-YXNCGESGECIVEYLSE  112 (186)
T ss_dssp             ----------------------ETTEEEEECSSTTSSCSEEEEECTTEEEETTEEE-EGGGT-TCCCCTTEEEEEEEETT
T ss_pred             ----------------------CCCCEeecCCCCcCCCCEECCCCCCCccCCCCCC-CCcCc-CCCCCCCCEEeeCCcCC
Confidence                                  4556788887     8999999999999865543 78998 78899999999    66


Q ss_pred             CCCCceEeecCCCCee---cCCCccccCCccccCCCCC-CCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         666 PGDKQITCLCLKGGTV---SSEYCQFENSAACVTLNPC-QNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       666 ~Gs~~y~C~C~~Gftg---~G~~C~~~~ideC~s~~pC-~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .++  |+|.|++||+|   +|..|+..++++|.  ++| .++++|+++.++  |+|.|++||+|..|+.
T Consensus       113 ~g~--~~C~C~~Gy~g~~~~~~~C~~~~~~~C~--~~C~~~~~~C~n~~g~--y~C~C~~G~~g~~~~~  175 (186)
T 1z1y_A          113 IQS--AGCSCAIGXVPNPEDEXXCTXTGETACQ--LXCNTDNEVCXNVEGV--YXCQCMEGFTFDXEXN  175 (186)
T ss_dssp             EEE--EEEEECTEEEEETTTTTEEEEEECCCCC--CCCCTTTEEEEEETTE--EEEEECTTCEEETTTT
T ss_pred             CCC--ceEECCCCCcccCCCCCcceEcCCCccc--ccccccCcceecCCCC--eeeECCCCCccCcccc
Confidence            665  99999999997   66999842258895  599 899999999887  9999999999999874

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.78  E-value=2.7e-19  Score=169.57  Aligned_cols=113  Identities=29%  Similarity=0.745  Sum_probs=97.1

Q ss_pred             cCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccC
Q psy9686         617 QNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVT  696 (769)
Q Consensus       617 ~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s  696 (769)
                      .++++|+++.++|.|.|++||+|..|+. ++++|. ..+|.++++|++..++  |+|.|++||+  |..|+. ++++|. 
T Consensus        16 ~~~g~C~~~~g~~~C~C~~Gy~G~~C~~-~~~~C~-~~~C~~~~~C~~~~g~--~~C~C~~G~~--G~~C~~-~~~~C~-   87 (135)
T 2vj3_A           16 EHAGKCINTLGSFECQCLQGYTGPRCEI-DVNECV-SNPCQNDATCLDQIGE--FQCICMPGYE--GVHCEV-NTDECA-   87 (135)
T ss_dssp             STTCEEEECSSSEEEECCTTEESTTSCE-ECCTTT-TCCCCSSCEEEECSSC--EEEECCTTEE--SSSSCE-ECCTTT-
T ss_pred             CCCCEeECCCCCEEEECCCCCcCCcccc-cCccCC-CCCCCCCCEEeCCCCC--ceeeCCCCCc--CCccee-cCCccc-
Confidence            4557788889999999999999999985 488998 7899999999999877  9999999999  889985 688996 


Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPP  739 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~np  739 (769)
                      .++|.++++|++..++  |+|.|++||+|..|+.+|++|..++
T Consensus        88 ~~~C~~~g~C~~~~g~--~~C~C~~G~~G~~C~~~i~~C~~~~  128 (135)
T 2vj3_A           88 SSPCLHNGRCLDKINE--FQCECPTGFTGHLCQVDLHHILDAQ  128 (135)
T ss_dssp             TCCSTTTCEEEECSSC--EEEECCTTEESSSSCEECC------
T ss_pred             CCCcCCCCEeECCCCC--eEEECCCCCcCCccCccCccccCCC
Confidence            7899999999999877  9999999999999998999998764

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.76  E-value=1.5e-18  Score=164.49  Aligned_cols=121  Identities=26%  Similarity=0.640  Sum_probs=101.6

Q ss_pred             ccccCCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc-ccccchhccccCceeeeeeeecccCCCCCCCCCCC
Q psy9686         512 AAALGGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL-EITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQ  588 (769)
Q Consensus       512 c~dideC~--s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce-dideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~  588 (769)
                      +.|+|+|.  .+||.++|+|+++.++   |+|.|++||+|..|+ ++++|                    ..+||     
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~---~~C~C~~Gy~G~~C~~~~~~C--------------------~~~~C-----   53 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGS---FECQCLQGYTGPRCEIDVNEC--------------------VSNPC-----   53 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSS---EEEECCTTEESTTSCEECCTT--------------------TTCCC-----
T ss_pred             CcccccccCCCCCCCCCCEeECCCCC---EEEECCCCCcCCcccccCccC--------------------CCCCC-----
Confidence            46789997  7899999999999887   999999999999995 56665                    45566     


Q ss_pred             cCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCC
Q psy9686         589 GQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGD  668 (769)
Q Consensus       589 C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs  668 (769)
                                                  .++++|++..++|.|.|++||.|..|+.+ +++|. ..+|.++++|++..++
T Consensus        54 ----------------------------~~~~~C~~~~g~~~C~C~~G~~G~~C~~~-~~~C~-~~~C~~~g~C~~~~g~  103 (135)
T 2vj3_A           54 ----------------------------QNDATCLDQIGEFQCICMPGYEGVHCEVN-TDECA-SSPCLHNGRCLDKINE  103 (135)
T ss_dssp             ----------------------------CSSCEEEECSSCEEEECCTTEESSSSCEE-CCTTT-TCCSTTTCEEEECSSC
T ss_pred             ----------------------------CCCCEEeCCCCCceeeCCCCCcCCcceec-CCccc-CCCcCCCCEeECCCCC
Confidence                                        34467888889999999999999999863 88997 7899999999999877


Q ss_pred             CceEeecCCCCeecCCCccccCCcccc
Q psy9686         669 KQITCLCLKGGTVSSEYCQFENSAACV  695 (769)
Q Consensus       669 ~~y~C~C~~Gftg~G~~C~~~~ideC~  695 (769)
                        |+|.|++||+  |..|+. ++++|.
T Consensus       104 --~~C~C~~G~~--G~~C~~-~i~~C~  125 (135)
T 2vj3_A          104 --FQCECPTGFT--GHLCQV-DLHHIL  125 (135)
T ss_dssp             --EEEECCTTEE--SSSSCE-ECC---
T ss_pred             --eEEECCCCCc--CCccCc-cCcccc
Confidence              9999999999  899986 788886

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.72  E-value=5e-21  Score=200.27  Aligned_cols=196  Identities=10%  Similarity=-0.014  Sum_probs=140.2

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCcCCCC-cccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCcccccccc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQSG-LEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYL  600 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~GftG~~C-edideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~gy~  600 (769)
                      +|.++|+|++...+   |+|.||+||+|.+| +++++|..              ...|.+.||.+++.|..+..|...  
T Consensus        39 ~c~ngG~C~~g~~~---y~C~Cp~Gf~G~~Ce~ni~ec~~--------------~~~c~s~pC~nggtc~~G~~c~~~--   99 (267)
T 4fbr_A           39 KSDDGGKTLKGTMT---YNGEGPIGFRGTLSSANNYTVEN--------------QWGGTSAPWQPGGVWVLGARDKQN--   99 (267)
T ss_dssp             ECSSTTSEEEEEEE---ETTSCCEEEEEEECSTTEEEEEE--------------ESSSTTSCEEEEEEEECCCCSSCC--
T ss_pred             CcCCCCeecCCCCC---eEEeCCCCccccccccccccccc--------------ccCcCCCcccCCCeeeccCccccc--
Confidence            79999999997765   99999999999999 45677632              344678888887776554433221  


Q ss_pred             cccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCe
Q psy9686         601 WLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGT  680 (769)
Q Consensus       601 ~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gft  680 (769)
                           .   ......|.++++|++...+|.|.|++||+|..|+.. +++|. ..++...+.|.+.     .+|     +.
T Consensus       100 -----~---eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~-~d~C~-n~~~c~s~pC~ng-----g~c-----~~  159 (267)
T 4fbr_A          100 -----I---VAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGD-TYSVE-NQWGGSAAPWHSG-----GVW-----VL  159 (267)
T ss_dssp             -----E---EEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCC-EEEEE-EECSSTTSCCEEE-----EEE-----EC
T ss_pred             -----c---ccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCC-ccccc-ccCCcCCccccCC-----cce-----ec
Confidence                 1   233456999999999999999999999999999974 77865 3333333333331     122     12


Q ss_pred             ecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCC------CCCC----------------
Q psy9686         681 VSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVES------VDEP----------------  738 (769)
Q Consensus       681 g~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dide------C~~n----------------  738 (769)
                        |..|+. +++ |. ..+|.++|+|++..++  |+|+|++||+|..|+.++++      |.+.                
T Consensus       160 --G~~c~~-~i~-c~-~~~c~ngg~C~dg~~~--y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~  232 (267)
T 4fbr_A          160 --GTRGKQ-NVI-NV-DAKSNDGGKTLSGTMT--YNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQ  232 (267)
T ss_dssp             --CSSTTS-CEE-EE-EEECSSTTSEEEEEEE--ETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTC
T ss_pred             --cccccc-ccc-cC-CCCCCCCCEeeCCCCC--eEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCC
Confidence              556664 343 32 6778888899887665  89999999999988888887      3322                


Q ss_pred             -------CC-CCCceeeCCCCccccCCC-Cccce
Q psy9686         739 -------PS-EDETSVDLQLGSQANSYN-WAHML  763 (769)
Q Consensus       739 -------pC-~~GtC~n~~ggy~C~~~~-w~~~l  763 (769)
                             || ++|+|+|..++|+|.... |+|.|
T Consensus       233 n~~~c~~~c~ngGtC~dg~~sy~CeCp~GF~G~~  266 (267)
T 4fbr_A          233 NVVALNVASSDGGKTLAGTMIYNGEGPIGFRARL  266 (267)
T ss_dssp             CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEE
T ss_pred             ccccCCcCCCCCCEeeCCCcceeecCCCCccccC
Confidence                   33 467888988899988774 77765

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.69  E-value=5e-17  Score=154.58  Aligned_cols=126  Identities=29%  Similarity=0.628  Sum_probs=98.0

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEI  595 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C  595 (769)
                      |+|.++||.++|+|++..+. ..|+|.|++||+|..|+.+.++..                                   
T Consensus         1 d~C~~~pC~~~g~C~~~~~~-g~~~C~C~~G~~G~~C~~~~~~~~-----------------------------------   44 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLAD-GSFSCECPDGFTDPNCSSVVEVAS-----------------------------------   44 (143)
T ss_dssp             --CCSCCCGGGCEEEC------CCEEECCTTCCTTTTCSCCCCTT-----------------------------------
T ss_pred             CcCCCCcCCCCCEeeCCCCC-CCEEeECCCCCCCCCCccCccccc-----------------------------------
Confidence            57999999999999987520 139999999999999966544310                                   


Q ss_pred             ccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEe-------eCCCC
Q psy9686         596 TPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV-------ASPGD  668 (769)
Q Consensus       596 ~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCv-------nt~Gs  668 (769)
                                                                ....|.  ++++|. .++|.++++|+       ++.++
T Consensus        45 ------------------------------------------~~~~c~--~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~   79 (143)
T 4d90_A           45 ------------------------------------------DEEEPT--SAGPCT-PNPCHNGGTCEISEAYRGDTFIG   79 (143)
T ss_dssp             ------------------------------------------TTTSCC--CCCTTS-SCCCCTTCEEEECCCEETTEECC
T ss_pred             ------------------------------------------cccccc--cCCcCC-CCCCCCCCEecCCCccccCCCCC
Confidence                                                      011222  356776 77899999998       44455


Q ss_pred             CceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         669 KQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       669 ~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                        |+|.|++||+  |..|+. ++++|. .++|.++++|+++.++  |+|.|++||+|++|+.
T Consensus        80 --~~C~C~~G~~--G~~C~~-~i~~C~-~~~C~~~~~C~~~~g~--~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           80 --YVCKCPRGFN--GIHCQH-NINECE-VEPCKNGGICTDLVAN--YSCECPGEFMGRNCQY  133 (143)
T ss_dssp             --EEEECCTTEE--STTSCE-ECCTTT-TCCSCTTCEEEEETTE--EEEECCTTCBSTTSCB
T ss_pred             --eEeECcCCCc--CCCccc-CCCcCC-CCCCCCCCEeECCCCC--eEeECCCCCccCCcee
Confidence              9999999998  999985 789996 8899999999999877  9999999999999975

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.67  E-value=5.2e-18  Score=168.93  Aligned_cols=135  Identities=17%  Similarity=0.400  Sum_probs=113.1

Q ss_pred             ccCCCccccCCCCcccccCCCCCCC---cccccccccccc---CCCCCCCCeEeeCC-----CCCceEeecCCCCeecCC
Q psy9686         616 QQNISPLKDGNLSFYCNCTEDFTGE---YCQFENSAACVT---LNPCQNNATCVASP-----GDKQITCLCLKGGTVSSE  684 (769)
Q Consensus       616 c~ngg~C~n~~gsy~C~C~~Gy~G~---~Ce~~~ideC~~---~~pC~n~gtCvnt~-----Gs~~y~C~C~~Gftg~G~  684 (769)
                      |.++ +|+++.++|.|.|++||.|.   .|+  ++++|..   .++|.++++|+++.     ++  |+|.|++||+|.+.
T Consensus        13 C~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~--~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~--y~C~C~~G~~g~~~   87 (186)
T 1z1y_A           13 CXNG-QLVQMSNHFXCMCNEGLVHLSENTCE--EXNECXXETLGXACGEFGQCIENPDPAQVNM--YXCGCIEGYTLXED   87 (186)
T ss_dssp             CBTE-EEEECSSCEEEEECTTEEEEETTEEE--ECCCCSGGGTTSEEETTEEEEECSSTTSSCS--EEEEECTTEEEETT
T ss_pred             CCCC-EeECCCCCeEeECCCCCccCCCCccC--CCCcccCCCCCCCCCCCCEeecCCCCcCCCC--EECCCCCCCccCCC
Confidence            4543 89999999999999999887   898  6899973   47899999999998     55  99999999996655


Q ss_pred             CccccCCccccCCCCCCCCCEEe----cCCCCCceEEecCCCCCC-----CCCCCC-CCCCCCCCC--CCCceeeCCCCc
Q psy9686         685 YCQFENSAACVTLNPCQNNATCV----ASPGDKQITCLCLKGFEG-----PHRELP-VESVDEPPS--EDETSVDLQLGS  752 (769)
Q Consensus       685 ~C~~~~ideC~s~~pC~ngg~Cv----nt~Gs~~y~C~C~~GytG-----~~Ce~d-ideC~~npC--~~GtC~n~~ggy  752 (769)
                      .|+   +++|. .++|.++++|+    ++.++  |+|.|++||+|     ..|+.. +++|.. +|  ++++|++..++|
T Consensus        88 ~C~---~d~C~-~~~C~~~g~C~~~~~~~~g~--~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~n~~g~y  160 (186)
T 1z1y_A           88 TCV---LDVCQ-YXNCGESGECIVEYLSEIQS--AGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCXNVEGVY  160 (186)
T ss_dssp             EEE---EGGGT-TCCCCTTEEEEEEEETTEEE--EEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEEEETTEE
T ss_pred             CCC---CCcCc-CCCCCCCCEEeeCCcCCCCC--ceEECCCCCcccCCCCCcceEcCCCcccc-cccccCcceecCCCCe
Confidence            554   68996 78899999999    77666  99999999998     889742 589985 66  688999999999


Q ss_pred             cccCCC-Cccc
Q psy9686         753 QANSYN-WAHM  762 (769)
Q Consensus       753 ~C~~~~-w~~~  762 (769)
                      +|...+ |++.
T Consensus       161 ~C~C~~G~~g~  171 (186)
T 1z1y_A          161 XCQCMEGFTFD  171 (186)
T ss_dssp             EEEECTTCEEE
T ss_pred             eeECCCCCccC
Confidence            998774 7654

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.63  E-value=1.3e-16  Score=172.61  Aligned_cols=157  Identities=25%  Similarity=0.503  Sum_probs=57.6

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCC--c
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSG--L  593 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~--~  593 (769)
                      .+| +++|.++|+|.+   .   +.|.|++||+|..|+. ++|                     ..+|.+++.|...  +
T Consensus       149 ~~C-~~~C~~~G~C~~---~---~~C~C~~G~~G~~C~~-~~C---------------------~~~C~~~G~C~~~~~C  199 (324)
T 2ygq_A          149 AEC-PGGCRNGGFCNE---R---RICECPDGFHGPHCEK-ALC---------------------TPRCMNGGLCVTPGFC  199 (324)
T ss_dssp             CCC-SSCCCSSCEECT---T---SCEECCTTEESSSSCE-ESS---------------------SSCCCTTCEECSSCCE
T ss_pred             CCC-CCCCCCCCEECC---C---CeEECCCCCcCCCCCC-CCC---------------------CCCCCCCCEEcCCCEE
Confidence            356 368999999986   2   6899999999999954 334                     2356655555432  3


Q ss_pred             cccccccccccc-ccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceE
Q psy9686         594 EITPVYLWLMKM-KTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQIT  672 (769)
Q Consensus       594 ~C~~gy~~~~~~-~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~  672 (769)
                      .|.+||.+.... ..|.    ..|.++|+|++.   +.|.|++||.|..|+   +++|  ..+|.++++|+..     ++
T Consensus       200 ~C~~G~~G~~C~~~~C~----~~C~~~G~C~~~---~~C~C~~G~~G~~C~---~~~C--~~~C~~~g~C~~~-----~~  262 (324)
T 2ygq_A          200 ICPPGFYGVNCDKANCS----TTCFNGGTCFYP---GKCICPPGLEGEQCE---ISKC--PQPCRNGGKCIGK-----SK  262 (324)
T ss_dssp             ECCTTCBTTTTCBCCCS----SCCCSSCCBSCS---SCBCCCTTCCTTTTC-----------------------------
T ss_pred             eCCCCccCCCcccCcCC----CCCCCCCeeCCC---CeeeCCCCccCCCCC---cCcC--CCcCCCCCEECCC-----CE
Confidence            566666553222 1221    345666666542   567777777777665   3456  3566666666531     56


Q ss_pred             eecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         673 CLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       673 C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      |.|++||+  |..|+.   +.|.  .+|.++|+|++.     ++|.|++||+|.+|+.
T Consensus       263 C~C~~G~~--G~~C~~---~~C~--~~C~~~g~C~~~-----~~C~C~~G~~G~~C~~  308 (324)
T 2ygq_A          263 CKCSKGYQ--GDLCSK---PVCE--PGCGAHGTCHEP-----NKCQCQEGWHGRHCNK  308 (324)
T ss_dssp             ----------------------------------------------------------
T ss_pred             EECCCCCc--CCCCcC---CCCC--CCCCCCCEECCC-----CEeECCCCCcCCCCCC
Confidence            77777776  666652   3562  566666666642     5677777777777653

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.62  E-value=7.5e-16  Score=178.96  Aligned_cols=133  Identities=20%  Similarity=0.427  Sum_probs=103.8

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEe-eCCCCCcC--CCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcC
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTC-TCPSGGQG--QSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQ  590 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C-~C~~GftG--~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~  590 (769)
                      ++++|.++||.++++|+++.++  .|+| .|++||+|  ..|++++||..                  .+..|.      
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~G--sy~C~~C~~GytGdg~~CeDiDEC~~------------------~p~~C~------   55 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDG--SWSCGFCPVGFLGNGTHCEDLDECAL------------------VPDICF------   55 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTS--CEEECCCCTTBCSCSSSCCBCCTTTT------------------SCCCSC------
T ss_pred             cccccCCCCCCCCCEEecCCCC--CeECCcCCCccCCCCCCccccccccC------------------CCCccc------
Confidence            6899999999999999998753  3999 99999998  78998888842                  122253      


Q ss_pred             CCcccccccccccccccceeeccccccCCC---ccccCCCCcccc-cCCCCCCCccc-------------ccccccccc-
Q psy9686         591 SGLEITPVYLWLMKMKTLVMVQYYLQQNIS---PLKDGNLSFYCN-CTEDFTGEYCQ-------------FENSAACVT-  652 (769)
Q Consensus       591 ~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg---~C~n~~gsy~C~-C~~Gy~G~~Ce-------------~~~ideC~~-  652 (769)
                                                 +++   +|+++.++|.|. |++||.|..|+             ..++++|.. 
T Consensus        56 ---------------------------~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~  108 (634)
T 1yo8_A           56 ---------------------------STSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDK  108 (634)
T ss_dssp             ---------------------------CCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTT
T ss_pred             ---------------------------CCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCC
Confidence                                       344   688999999998 99999988754             126899973 


Q ss_pred             CCCCCCCCeEeeCC----CCCceEeecCCCCeecCCCccc-cCCccccC-CCCCC
Q psy9686         653 LNPCQNNATCVASP----GDKQITCLCLKGGTVSSEYCQF-ENSAACVT-LNPCQ  701 (769)
Q Consensus       653 ~~pC~n~gtCvnt~----Gs~~y~C~C~~Gftg~G~~C~~-~~ideC~s-~~pC~  701 (769)
                      .++|+++++|+++.    ++  |+|.|++||+|+|..|+. .++++|.. ..+|.
T Consensus       109 ~~pC~~~~~Cvnt~~~~~Gs--Y~C~C~~Gy~GdG~~Ce~d~DiDeC~~~~~~C~  161 (634)
T 1yo8_A          109 THNCHKHAECIYLGHFSDPM--YKCECQTGYAGDGLICGEDSDLDGWPNLNLVCA  161 (634)
T ss_dssp             CCCCCTTEEEEECCTTCSSS--EEEEECTTEEESSSSEEECTTSSSSCSSCCTTT
T ss_pred             CcccccCccccccccccccc--eeeeccCCccccCcccccccCcccccCCCCccc
Confidence            46899999999987    65  999999999998999974 26788841 23454

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.58  E-value=1.9e-15  Score=143.70  Aligned_cols=113  Identities=25%  Similarity=0.519  Sum_probs=90.5

Q ss_pred             cccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcccc-----------CCccccCCCCCCCCCEEe-------cC
Q psy9686         648 AACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFE-----------NSAACVTLNPCQNNATCV-------AS  709 (769)
Q Consensus       648 deC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~-----------~ideC~s~~pC~ngg~Cv-------nt  709 (769)
                      |+|. +++|.++++|++..+.++|+|.|++||+  |..|+..           ++++|. .++|.++++|+       ++
T Consensus         1 d~C~-~~pC~~~g~C~~~~~~g~~~C~C~~G~~--G~~C~~~~~~~~~~~~c~~~~~C~-~~~C~~~g~C~~~~~~~~~~   76 (143)
T 4d90_A            1 DICD-PNPCENGGICLPGLADGSFSCECPDGFT--DPNCSSVVEVASDEEEPTSAGPCT-PNPCHNGGTCEISEAYRGDT   76 (143)
T ss_dssp             --CC-SCCCGGGCEEEC-----CCEEECCTTCC--TTTTCSCCCCTTTTTSCCCCCTTS-SCCCCTTCEEEECCCEETTE
T ss_pred             CcCC-CCcCCCCCEeeCCCCCCCEEeECCCCCC--CCCCccCccccccccccccCCcCC-CCCCCCCCEecCCCccccCC
Confidence            4676 7899999999987632349999999999  8888731           356785 78899999999       55


Q ss_pred             CCCCceEEecCCCCCCCCCCCCCCCCCCCCC-CCCceeeCCCCccccCCC-Cccceeee
Q psy9686         710 PGDKQITCLCLKGFEGPHRELPVESVDEPPS-EDETSVDLQLGSQANSYN-WAHMLIVT  766 (769)
Q Consensus       710 ~Gs~~y~C~C~~GytG~~Ce~dideC~~npC-~~GtC~n~~ggy~C~~~~-w~~~ll~~  766 (769)
                      .++  |+|.|++||+|..|+.++++|..+|| ++++|++..++|+|...+ |.|+-...
T Consensus        77 ~~~--~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           77 FIG--YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             ECC--EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred             CCC--eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence            556  99999999999999889999999999 678999999999998774 88875443

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.54  E-value=8.4e-15  Score=172.19  Aligned_cols=168  Identities=21%  Similarity=0.415  Sum_probs=120.6

Q ss_pred             CCCCCCCCCCcEEeeCCCCccceE---eeCCCCCcCCCCcc-cccchhccccCceeeeeeeecccCCCCCCCCCCCcCCC
Q psy9686         517 GCAGRPCRNNGTCTPVSGGVVNFT---CTCPSGGQGQSGLE-ITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSG  592 (769)
Q Consensus       517 eC~s~PC~ngGtCvn~~gs~~~y~---C~C~~GftG~~Ced-ideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~  592 (769)
                      +|..+||.++++|.+..+.   |.   |.|++||+|..|+. +....            ....+.|...+          
T Consensus       436 ~C~~~pc~n~~~C~~g~G~---~~~G~C~C~~Gy~G~~Ce~~~~~~~------------~~~~~~C~~~~----------  490 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGT---FECGVCRCGPGWLGSQCECSEEDYR------------PSQQDECSPRE----------  490 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEE---EETTEEEECTTCCSSSSCCSCC------------------CCCCSSSS----------
T ss_pred             CCcCCCCCCCCcccCCCCe---EeCCceEeCCCccCCceeeccCccC------------CccCCcCCCCC----------
Confidence            6788999999999876554   77   99999999999942 11000            00001111100          


Q ss_pred             cccccccccccccccceeeccccccCCCccccCCCCcccccC----CCCCCCcccccccccccc--CCCCCCCCeEeeCC
Q psy9686         593 LEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCT----EDFTGEYCQFENSAACVT--LNPCQNNATCVASP  666 (769)
Q Consensus       593 ~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~----~Gy~G~~Ce~~~ideC~~--~~pC~n~gtCvnt~  666 (769)
                                         ....|.++|+|++    +.|.|.    +||.|..|+.+ +++|..  ..+|.++|+|.+  
T Consensus       491 -------------------~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~~-~~~C~~~~~~~C~~~G~C~~--  544 (690)
T 3fcs_B          491 -------------------GQPVCSQRGECLC----GQCVCHSSDFGKITGKYCECD-DFSCVRYKGEMCSGHGQCSC--  544 (690)
T ss_dssp             -------------------SSCGGGGSEEECS----SSEEECCCSSCCCBSTTSCBC-SSCCCBSSSSBGGGSEEEET--
T ss_pred             -------------------CCCCCCCCCEEEC----CeeEeecCCCCCeeCCCcCcc-cCcCcCCCCCCCCCCCEecC--
Confidence                               0123567788874    589999    99999999863 678962  247999999976  


Q ss_pred             CCCceEeecCCCCeecCCCccc-cCCccccCC--CCCCCCCEEecCCCCCceEEec-CCCCCCCCCCCCCCCCCCCCC-C
Q psy9686         667 GDKQITCLCLKGGTVSSEYCQF-ENSAACVTL--NPCQNNATCVASPGDKQITCLC-LKGFEGPHRELPVESVDEPPS-E  741 (769)
Q Consensus       667 Gs~~y~C~C~~Gftg~G~~C~~-~~ideC~s~--~pC~ngg~Cvnt~Gs~~y~C~C-~~GytG~~Ce~dideC~~npC-~  741 (769)
                          +.|.|.+||+  |..|+. .++++|...  .+|.++|+|++.      +|.| ++||+|..|+. ...|. ++| +
T Consensus       545 ----g~C~C~~Gy~--G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g------~C~C~~~Gy~G~~Ce~-C~~C~-~~C~~  610 (690)
T 3fcs_B          545 ----GDCLCDSDWT--GYYCNCTTRTDTCMSSNGLLCSGRGKCECG------SCVCIQPGSYGDTCEK-CPTCP-DACTF  610 (690)
T ss_dssp             ----TEEEECTTEE--SSSSCEECCCTTTBCTTSSBTSSSCEEETT------EEECCSTTCBSTTSCB-CTTSC-CTTTS
T ss_pred             ----CeeECcCCCc--CCCCccCCCCCcccCCCCCCCCCCCEEeCC------EEECCCCCccCCCcCc-CCCCC-CCCCC
Confidence                4799999999  888872 156789621  679999999862      8999 99999999974 35574 566 7


Q ss_pred             CCceeeCC
Q psy9686         742 DETSVDLQ  749 (769)
Q Consensus       742 ~GtC~n~~  749 (769)
                      +|+|++-.
T Consensus       611 ~g~Cv~C~  618 (690)
T 3fcs_B          611 KKECVECK  618 (690)
T ss_dssp             CCGGGTTT
T ss_pred             CCCcccCC
Confidence            89998733

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.53  E-value=1e-15  Score=149.17  Aligned_cols=139  Identities=19%  Similarity=0.492  Sum_probs=98.6

Q ss_pred             ccCCCC-CCCCCCCcEEeeCCCCccceEeeCCCCCc----CCCCccccc--chhccccCceeeeeeeecccCCCCCCCCC
Q psy9686         514 ALGGCA-GRPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITP--VYLWLMKLKTLVMVQYYFRRKSTSPHKSR  586 (769)
Q Consensus       514 dideC~-s~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~Cedide--C~~~~~~~~~~~~~~~~~~~Cs~~pC~~~  586 (769)
                      |||||. .+||. +++|++++++   |+|.|++||+    |..|+++++  |..                  ...+|.  
T Consensus         2 dideC~~~~~C~-~~~C~n~~gs---y~C~C~~Gy~~~~~g~~C~d~~~~~C~~------------------~~~~c~--   57 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGS---YICDCPPDFELNPTRVGCVDTRSGNCYL------------------DIRPRG--   57 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTE---EEEECCTTCEECTTSSBEECCCCEEEEE------------------EC------
T ss_pred             ccccCCCCCCCC-CCEeECCCCC---EEEeCCCCCeECCCCCcccCCCCCcccC------------------CCcccC--
Confidence            689997 58997 6899999987   9999999998    788987765  532                  112221  


Q ss_pred             CCcCCCcccccccccccccccceeeccccccCCCccccCCC----CcccccCCCCC-CCccccccccccccCCCCCCCCe
Q psy9686         587 GQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNL----SFYCNCTEDFT-GEYCQFENSAACVTLNPCQNNAT  661 (769)
Q Consensus       587 g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~g----sy~C~C~~Gy~-G~~Ce~~~ideC~~~~pC~n~gt  661 (769)
                                                   +.+++.|++..+    +|.|.|++||. |..|+     .|      ..   
T Consensus        58 -----------------------------~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~-----~C------~~---   94 (162)
T 1uzk_A           58 -----------------------------DNGDTACSNEIGVGVSKASCCCSLGKAWGTPCE-----MC------PA---   94 (162)
T ss_dssp             -----------------------------------CEEEEEEEECHHHHHTTTCCEETTTTE-----EC------CC---
T ss_pred             -----------------------------CCCCCcccCCcCCcccCceeeCCCCCCcCCCcc-----cC------CC---
Confidence                                         022355666655    79999999997 55554     13      21   


Q ss_pred             EeeCCCCCceEeecCC--CCeec--CCCccccCCccccC-CCCCCCCCEEecCCCCCceEEecCCCCCCCCC
Q psy9686         662 CVASPGDKQITCLCLK--GGTVS--SEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGFEGPHR  728 (769)
Q Consensus       662 Cvnt~Gs~~y~C~C~~--Gftg~--G~~C~~~~ideC~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~C  728 (769)
                        +..+  +|+|.|++  ||+++  +..|+  ++|+|.. +++|.+ ++|+++.++  |+|.|++||+|..-
T Consensus        95 --~~~~--~y~C~C~~g~G~~~~~~~~~c~--dideC~~~~~~C~~-g~C~n~~gs--y~C~C~~Gy~g~~d  157 (162)
T 1uzk_A           95 --VNTS--EYKILCPGGEGFRPNPITVILE--DIDECQELPGLCQG-GKCINTFGS--FQCRCPTGYYLNED  157 (162)
T ss_dssp             --TTSH--HHHHHCTTCTTEEECTTTCCEE--ECCHHHHCGGGGBT-SEEEECSSC--EEEECCTTCCBCTT
T ss_pred             --CCCC--CceeECCCCCCcccCCCCCccC--ccccccCCCCCcCC-CEeEcCCCC--EEeeCCCCccCCCC
Confidence              1223  49999998  99965  34566  8999963 357986 699999988  99999999988643

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.53  E-value=1e-14  Score=169.56  Aligned_cols=112  Identities=21%  Similarity=0.476  Sum_probs=92.7

Q ss_pred             cCCCccccCCC-Cccc-ccCCCCCC--CccccccccccccCCC--CCCCC---eEeeCCCCCceEee-cCCCCeecCC--
Q psy9686         617 QNISPLKDGNL-SFYC-NCTEDFTG--EYCQFENSAACVTLNP--CQNNA---TCVASPGDKQITCL-CLKGGTVSSE--  684 (769)
Q Consensus       617 ~ngg~C~n~~g-sy~C-~C~~Gy~G--~~Ce~~~ideC~~~~p--C~n~g---tCvnt~Gs~~y~C~-C~~Gftg~G~--  684 (769)
                      .++++|+++.+ +|.| .|++||+|  ..|+  ++++|. ..+  |.+++   +|+++.++  |+|. |++||+|.+.  
T Consensus        12 ~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce--DiDEC~-~~p~~C~~gg~~~~CvNt~gs--Y~C~~C~~Gy~G~~c~g   86 (634)
T 1yo8_A           12 FPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE--DLDECA-LVPDICFSTSKVPRCVNTQPG--FHCLPCPPRYRGNQPVG   86 (634)
T ss_dssp             CTTCCEEECTTSCEEECCCCTTBCSCSSSCC--BCCTTT-TSCCCSCCCSSSCCEEECSSS--EEECCCCTTEEECCCEE
T ss_pred             CCCCEEecCCCCCeECCcCCCccCCCCCCcc--cccccc-CCCCcccCCccccceeeccCc--eecccCCCCcccCcccc
Confidence            45567787764 5999 99999998  7998  799997 555  99998   99999887  9999 9999995432  


Q ss_pred             -----------CccccCCccccC-CCCCCCCCEEecCC----CCCceEEecCCCCCC--CCCCC--CCCCCCC
Q psy9686         685 -----------YCQFENSAACVT-LNPCQNNATCVASP----GDKQITCLCLKGFEG--PHREL--PVESVDE  737 (769)
Q Consensus       685 -----------~C~~~~ideC~s-~~pC~ngg~Cvnt~----Gs~~y~C~C~~GytG--~~Ce~--dideC~~  737 (769)
                                 .|+  ++++|.. .++|.++++|+++.    ++  |+|.|++||+|  ..|+.  +++||..
T Consensus        87 ~g~~~~~~dg~~C~--dideC~~~~~pC~~~~~Cvnt~~~~~Gs--Y~C~C~~Gy~GdG~~Ce~d~DiDeC~~  155 (634)
T 1yo8_A           87 VGLEAAKTEKQVCE--PENPCKDKTHNCHKHAECIYLGHFSDPM--YKCECQTGYAGDGLICGEDSDLDGWPN  155 (634)
T ss_dssp             SSSHHHHSCCCCEE--ECCTTTTTCCCCCTTEEEEECCTTCSSS--EEEEECTTEEESSSSEEECTTSSSSCS
T ss_pred             ccccccccCCCccc--ccccccCCCcccccCccccccccccccc--eeeeccCCccccCcccccccCcccccC
Confidence                       366  6899963 36999999999988    66  99999999987  78974  7888864

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.50  E-value=4.9e-17  Score=170.14  Aligned_cols=171  Identities=12%  Similarity=-0.006  Sum_probs=122.7

Q ss_pred             CCccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc-ccccchhccccCceeeeeeeecccCCCCCCCCCCC
Q psy9686         510 PGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL-EITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQ  588 (769)
Q Consensus       510 ~gc~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce-dideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~  588 (769)
                      ..|...++|.+.||.++|+|++...+   |+|.|++||+|.+|+ ++++|..              ...|.+.||.+.+.
T Consensus        94 ~~c~~~~eC~s~pC~ngG~C~~~~~s---y~C~C~~Gf~G~~Ce~~~d~C~n--------------~~~c~s~pC~ngg~  156 (267)
T 4fbr_A           94 ARDKQNIVAVSIKSNDGGKTLTGTTT---YNGEGPIGFKSEVTDGDTYSVEN--------------QWGGSAAPWHSGGV  156 (267)
T ss_dssp             CCSSCCEEEEEEECSSTTSEEEEEEE---ETTSCCEEEEEEECCCCEEEEEE--------------ECSSTTSCCEEEEE
T ss_pred             CccccccccCCCCCCCCCEEecCCcc---EEeeCCCCccccCCCCCcccccc--------------cCCcCCccccCCcc
Confidence            33555679999999999999997766   999999999999994 5677642              23356667766655


Q ss_pred             cCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCC
Q psy9686         589 GQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGD  668 (769)
Q Consensus       589 C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs  668 (769)
                      |+.+..|..          ........|.++++|++..++|+|.|++||+|..|+. ++++|. ...+-....|.+. + 
T Consensus       157 c~~G~~c~~----------~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~-~i~ec~-~~~~c~~~~c~~g-G-  222 (267)
T 4fbr_A          157 WVLGTRGKQ----------NVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP-DTYTVE-NQWGGSTAPWNPG-G-  222 (267)
T ss_dssp             EECCSSTTS----------CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET-TEEEEE-EECSCTTSCCEEE-E-
T ss_pred             eeccccccc----------ccccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc-ccceec-cCCCccCCcccCC-C-
Confidence            554432221          1122235689999999999999999999999999996 478865 2233233444443 2 


Q ss_pred             CceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         669 KQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       669 ~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                       .+.+.|..++.          ++.|  ..+|.++|+|++...+  |.|+|++||+|+
T Consensus       223 -~~~~~C~~g~n----------~~~c--~~~c~ngGtC~dg~~s--y~CeCp~GF~G~  265 (267)
T 4fbr_A          223 -FWMIGARNGQN----------VVAL--NVASSDGGKTLAGTMI--YNGEGPIGFRAR  265 (267)
T ss_dssp             -EEECCCCTTCC----------EEEE--EEECSSTTSEEEEEEE--ETTSCCEEEEEE
T ss_pred             -eEEEecCCCCc----------cccC--CcCCCCCCEeeCCCcc--eeecCCCCcccc
Confidence             25667877764          2234  3578899999997665  999999999875

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.50  E-value=1.3e-14  Score=142.76  Aligned_cols=150  Identities=23%  Similarity=0.493  Sum_probs=105.0

Q ss_pred             cceeeeccccccccccCCCccccCCCCC-CCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeee
Q psy9686         493 LAHFESQELFLSSALKKPGAAALGGCAG-RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMV  571 (769)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~gc~dideC~s-~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~  571 (769)
                      .....|.++|.+....       .+|.. .+|.++++|.. .     ..|.|++||+|..|+. ++|             
T Consensus        16 ~~~c~C~~g~~G~~C~-------~~C~~~~~c~~~g~C~~-~-----g~C~C~~G~~G~~C~~-~~C-------------   68 (169)
T 2vj2_A           16 RSAVTCDDYYYGFGCN-------KFCRPRDDFFGHYACDQ-N-----GNKTCMEGWMGPECNR-AIC-------------   68 (169)
T ss_dssp             -----CCTTEETTTTC-------EECCCEEETTEEEEECS-S-----CCEEECTTEESTTSCE-ECC-------------
T ss_pred             CeeeeCCCcCcCCCcc-------cccCCCCCcCCCCEeCC-C-----CeeECCCCCcCCCCCC-CCC-------------
Confidence            3445566666653321       13543 35778889964 2     4799999999999843 223             


Q ss_pred             eeecccCCCCCCCCCCCcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccccccccc
Q psy9686         572 QYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAACV  651 (769)
Q Consensus       572 ~~~~~~Cs~~pC~~~g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~  651 (769)
                             . ..|.                                ..++.|++   +|.|.|++||.|..|+     +|.
T Consensus        69 -------~-~~C~--------------------------------~~~g~C~~---~~~C~C~~G~~G~~C~-----~C~  100 (169)
T 2vj2_A           69 -------R-QGCS--------------------------------PKHGSCKL---PGDCRCQYGWQGLYCD-----KCI  100 (169)
T ss_dssp             -------C-TTCC--------------------------------TTTEECSS---TTCCEECTTEESSSSC-----EEC
T ss_pred             -------C-CCCC--------------------------------CCCcccCC---CCeeECCCCCCCCCcc-----cCC
Confidence                   1 1221                                02234654   4799999999999997     365


Q ss_pred             cCCC-CCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecC-CCCCceEEecCCCCCCCCCC
Q psy9686         652 TLNP-CQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVAS-PGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       652 ~~~p-C~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt-~Gs~~y~C~C~~GytG~~Ce  729 (769)
                       ..+ |.++ +|+   ++  |+|.|++||+  |..|+. ++++|...++|.++|+|+++ .++  |+|.|++||+|.+|+
T Consensus       101 -~~~~C~~g-~C~---~~--~~C~C~~G~~--G~~C~~-~~~~C~~~~~C~~~g~C~~~~~~~--~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          101 -PHPGCVHG-ICN---EP--WQCLCETNWG--GQLCDK-DLNYCGTHQPCLNGGTCSNTGPDK--YQCSCPEGYSGPNCE  168 (169)
T ss_dssp             -CCTTCSSE-ECS---ST--TCCEECTTEE--TTTTCE-ESCHHHHTCCCCTTCEEEECSTTC--EEEECCTTCCSTTSC
T ss_pred             -CCCCCCCC-CcC---CC--CEEeCCCCCC--CCcccC-CCCCCCCCCCCCCCCEEcCCCCCC--cEeECCCCCcCcCcC
Confidence             344 8764 887   23  8999999999  899985 68899644899999999996 665  999999999999997

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.49  E-value=2.5e-14  Score=136.39  Aligned_cols=104  Identities=24%  Similarity=0.609  Sum_probs=86.9

Q ss_pred             cccCCCccccCCCCcccccCCCCCC---------CccccccccccccC--CCCCCCCeEeeCCCCCceEeecCCCCeec-
Q psy9686         615 LQQNISPLKDGNLSFYCNCTEDFTG---------EYCQFENSAACVTL--NPCQNNATCVASPGDKQITCLCLKGGTVS-  682 (769)
Q Consensus       615 ~c~ngg~C~n~~gsy~C~C~~Gy~G---------~~Ce~~~ideC~~~--~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~-  682 (769)
                      .|.++++|+++   |.|.|++||+|         ..|+  ++++|...  .+|.++++|+++.++  |+|.|++||++. 
T Consensus         8 ~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~--dideC~~~~~~~C~~~~~C~n~~g~--y~C~C~~Gy~g~~   80 (143)
T 2bou_A            8 WCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD--DINECATLSKVSCGKFSDCWNTEGS--YDCVCSPGYEPVS   80 (143)
T ss_dssp             TCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE--ECCGGGC----CCCTTEEEEECSSC--EEEEECTTEEETT
T ss_pred             cCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC--ccccccCCCCCCCCCCCEEEcCCCC--eEeECCCCcccCc
Confidence            35677788764   89999999997         5887  68999832  389999999999887  999999999964 


Q ss_pred             ---------CCCccccCCccccC-CCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         683 ---------SEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       683 ---------G~~C~~~~ideC~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                               +..|+  ++|+|.. .++|.++++|+++.++  |+|.|++||+|..+.
T Consensus        81 ~~~~~~~~~~~~C~--dideC~~~~~~C~~~~~C~n~~g~--y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           81 GAKTFKNESENTCQ--DVDECSSGQHQCDSSTVCFNTVGS--YSCRCRPGWKPRHGI  133 (143)
T ss_dssp             CCSCBSSGGGCCEE--ECCHHHHTCCCCCTTSEEEECSSC--EEEECCSSSCBCTTC
T ss_pred             CccccccCCCCCcC--CccCccCcCCCCCCCCEEECCCCC--EEeeCCCCcccCCCC
Confidence                     45787  7899963 4789999999999987  999999999987764

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=156.48  Aligned_cols=141  Identities=19%  Similarity=0.324  Sum_probs=53.0

Q ss_pred             ceeeeccccccccccCCCccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeee
Q psy9686         494 AHFESQELFLSSALKKPGAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQY  573 (769)
Q Consensus       494 ~~~~~~~~~~~~~~~~~gc~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~  573 (769)
                      ..+.|.++|.+....      .+.|. .+|.++|+|++   .   +.|.|++||+|..|+. +.|               
T Consensus       165 ~~C~C~~G~~G~~C~------~~~C~-~~C~~~G~C~~---~---~~C~C~~G~~G~~C~~-~~C---------------  215 (324)
T 2ygq_A          165 RICECPDGFHGPHCE------KALCT-PRCMNGGLCVT---P---GFCICPPGFYGVNCDK-ANC---------------  215 (324)
T ss_dssp             SCEECCTTEESSSSC------EESSS-SCCCTTCEECS---S---CCEECCTTCBTTTTCB-CCC---------------
T ss_pred             CeEECCCCCcCCCCC------CCCCC-CCCCCCCEEcC---C---CEEeCCCCccCCCccc-CcC---------------
Confidence            356677777654222      13565 47999999986   2   6899999999999953 334               


Q ss_pred             ecccCCCCCCCCCCCcCCC--ccccccccccccc-ccceeeccccccCCCccccCCCCcccccCCCCCCCcccccccccc
Q psy9686         574 YFRRKSTSPHKSRGQGQSG--LEITPVYLWLMKM-KTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAAC  650 (769)
Q Consensus       574 ~~~~Cs~~pC~~~g~C~~~--~~C~~gy~~~~~~-~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC  650 (769)
                            ..+|.+++.|...  +.|.+||.+.... ..|.    ..|.+++.|+.   .+.|.|++||.|..|+   ++.|
T Consensus       216 ------~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~----~~C~~~g~C~~---~~~C~C~~G~~G~~C~---~~~C  279 (324)
T 2ygq_A          216 ------STTCFNGGTCFYPGKCICPPGLEGEQCEISKCP----QPCRNGGKCIG---KSKCKCSKGYQGDLCS---KPVC  279 (324)
T ss_dssp             ------SSCCCSSCCBSCSSCBCCCTTCCTTTTC----------------------------------------------
T ss_pred             ------CCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCC----CcCCCCCEECC---CCEEECCCCCcCCCCc---CCCC
Confidence                  2567777777653  5788999775432 2222    45888899974   5799999999999998   4578


Q ss_pred             ccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccc
Q psy9686         651 VTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQF  688 (769)
Q Consensus       651 ~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~  688 (769)
                      .  .+|.++++|++.     ++|.|.+||+  |..|+.
T Consensus       280 ~--~~C~~~g~C~~~-----~~C~C~~G~~--G~~C~~  308 (324)
T 2ygq_A          280 E--PGCGAHGTCHEP-----NKCQCQEGWH--GRHCNK  308 (324)
T ss_dssp             --------------------------------------
T ss_pred             C--CCCCCCCEECCC-----CEeECCCCCc--CCCCCC
Confidence            4  689999999863     6899999999  888874

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.47  E-value=5.2e-15  Score=145.58  Aligned_cols=117  Identities=21%  Similarity=0.467  Sum_probs=92.8

Q ss_pred             CCccccCCCCcccccCCCCCCCccccccccccccCCCCC-CCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCC
Q psy9686         619 ISPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ-NNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTL  697 (769)
Q Consensus       619 gg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~-n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~  697 (769)
                      +++|..   ...|.|.+||+|..|+   .+.|.  ..|. .++.|++.     |+|.|++||+  |..|+     +|. .
T Consensus        43 ~g~C~~---~g~C~C~~G~~G~~C~---~~~C~--~~C~~~~g~C~~~-----~~C~C~~G~~--G~~C~-----~C~-~  101 (169)
T 2vj2_A           43 HYACDQ---NGNKTCMEGWMGPECN---RAICR--QGCSPKHGSCKLP-----GDCRCQYGWQ--GLYCD-----KCI-P  101 (169)
T ss_dssp             EEEECS---SCCEEECTTEESTTSC---EECCC--TTCCTTTEECSST-----TCCEECTTEE--SSSSC-----EEC-C
T ss_pred             CCEeCC---CCeeECCCCCcCCCCC---CCCCC--CCCCCCCcccCCC-----CeeECCCCCC--CCCcc-----cCC-C
Confidence            345643   3479999999999998   34684  5676 56788762     7899999999  88887     365 4


Q ss_pred             CC-CCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCC-CCC-CCCceeeC-CCCccccCCC-Cccc
Q psy9686         698 NP-CQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDE-PPS-EDETSVDL-QLGSQANSYN-WAHM  762 (769)
Q Consensus       698 ~p-C~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~-npC-~~GtC~n~-~ggy~C~~~~-w~~~  762 (769)
                      ++ |.++ +|+   ++  |+|.|++||+|..|+.++++|.. ++| ++|+|++. .++|+|...+ |.|+
T Consensus       102 ~~~C~~g-~C~---~~--~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~  165 (169)
T 2vj2_A          102 HPGCVHG-ICN---EP--WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGP  165 (169)
T ss_dssp             CTTCSSE-ECS---ST--TCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred             CCCCCCC-CcC---CC--CEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence            44 8865 898   23  89999999999999888999985 788 67999996 8999998774 8875

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.46  E-value=4.4e-14  Score=134.70  Aligned_cols=101  Identities=21%  Similarity=0.493  Sum_probs=81.7

Q ss_pred             CCCCCCcEEeeCCCCccceEeeCCCCCcC---------CCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCC
Q psy9686         521 RPCRNNGTCTPVSGGVVNFTCTCPSGGQG---------QSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQS  591 (769)
Q Consensus       521 ~PC~ngGtCvn~~gs~~~y~C~C~~GftG---------~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~  591 (769)
                      +||.++++|++   .   |+|.|++||+|         ..|+++++|...                 ...+|        
T Consensus         7 ~~C~~~~~C~~---~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~-----------------~~~~C--------   55 (143)
T 2bou_A            7 RWCPQDSSCVN---A---TACRCNPGFSSFSEIITTPMETCDDINECATL-----------------SKVSC--------   55 (143)
T ss_dssp             TTCCTTEEESS---S---SCEEECTTEECSSSSBCSTTCCCEECCGGGC---------------------CC--------
T ss_pred             CcCCCCCEEcC---C---CEEeCCCCCcCccccccCCCCcCCccccccCC-----------------CCCCC--------
Confidence            57999999997   2   78999999998         468888877420                 01245        


Q ss_pred             CcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCC------------cccccccccccc-CCCCCC
Q psy9686         592 GLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGE------------YCQFENSAACVT-LNPCQN  658 (769)
Q Consensus       592 ~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~------------~Ce~~~ideC~~-~~pC~n  658 (769)
                                               .++++|+++.++|.|.|++||.|.            .|+  ++|+|.. .++|.+
T Consensus        56 -------------------------~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~--dideC~~~~~~C~~  108 (143)
T 2bou_A           56 -------------------------GKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ--DVDECSSGQHQCDS  108 (143)
T ss_dssp             -------------------------CTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE--ECCHHHHTCCCCCT
T ss_pred             -------------------------CCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcC--CccCccCcCCCCCC
Confidence                                     445678889999999999999876            676  6899973 478999


Q ss_pred             CCeEeeCCCCCceEeecCCCCee
Q psy9686         659 NATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       659 ~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      +++|+++.++  |+|.|++||++
T Consensus       109 ~~~C~n~~g~--y~C~C~~Gy~g  129 (143)
T 2bou_A          109 STVCFNTVGS--YSCRCRPGWKP  129 (143)
T ss_dssp             TSEEEECSSC--EEEECCSSSCB
T ss_pred             CCEEECCCCC--EEeeCCCCccc
Confidence            9999999887  99999999994

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.40  E-value=1.2e-13  Score=128.00  Aligned_cols=105  Identities=20%  Similarity=0.516  Sum_probs=83.8

Q ss_pred             cccCCCCCCCCCCCcEEeeC-CCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCC
Q psy9686         513 AALGGCAGRPCRNNGTCTPV-SGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQS  591 (769)
Q Consensus       513 ~dideC~s~PC~ngGtCvn~-~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~  591 (769)
                      .++|+|.++||.+  +|+++ +++   |+|.|++||+|..+ ++++|..                .|...+|        
T Consensus         2 ~dideC~~~pC~~--~C~~~~~g~---y~C~C~~Gy~g~~~-~~~~C~~----------------~C~~~~C--------   51 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQPLDQTS---YLCVCAEGFAPIPH-EPHRCQM----------------FCNQTAC--------   51 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEECSSSC---EEEECCTTEEEETT-EEEEEEE----------------CCCSSEE--------
T ss_pred             CccccCCCCCCCC--CCCCCCCCC---EEeECCCCccccCC-CCCcccc----------------ccCCCCC--------
Confidence            3689999999985  99999 777   99999999999875 5566521                2323333        


Q ss_pred             CcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC---CCccccccccccccCCCCCCCCeEeeCCCC
Q psy9686         592 GLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT---GEYCQFENSAACVTLNPCQNNATCVASPGD  668 (769)
Q Consensus       592 ~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~---G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs  668 (769)
                                               .  +.|++ .++|.|.|++||.   |..|+  ++|+|...++|  +++|+++.++
T Consensus        52 -------------------------~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~--dideC~~~~~C--~~~C~n~~g~   99 (118)
T 1dx5_I           52 -------------------------P--ADCDP-NTQASCECPEGYILDDGFICT--DIDECENGGFC--SGVCHNLPGT   99 (118)
T ss_dssp             -------------------------E--CEECT-TSTTCEECCTTEEEETTTEEE--ECCHHHHCSSC--SSEEEECSSS
T ss_pred             -------------------------C--CcccC-CCCeEeECCCCccCCCCCccc--cccccCCCCCC--cCeEEeCCCC
Confidence                                     1  34666 4889999999999   88997  79999844889  6899999887


Q ss_pred             CceEeecCCCCee
Q psy9686         669 KQITCLCLKGGTV  681 (769)
Q Consensus       669 ~~y~C~C~~Gftg  681 (769)
                        |+|.|++||++
T Consensus       100 --y~C~C~~G~~g  110 (118)
T 1dx5_I          100 --FECICGPDSAL  110 (118)
T ss_dssp             --EEEEECSSSSC
T ss_pred             --EEEECCCCCcc
Confidence              99999999984

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.39  E-value=3.3e-13  Score=119.62  Aligned_cols=90  Identities=24%  Similarity=0.434  Sum_probs=73.6

Q ss_pred             CcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEe
Q psy9686         628 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCV  707 (769)
Q Consensus       628 sy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cv  707 (769)
                      +|.|.|.+||+|..|+   +++|. ..||.+      ..++  |+|.|++||+    .|+..++++|. .+||.|+|+|+
T Consensus         1 sy~C~C~~g~~g~~c~---~~~c~-~~pC~n------~~~~--y~C~C~~G~~----~C~~~~~~~C~-~~pC~ngg~C~   63 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQ---QHQSW-LRPVLR------SNRV--EYCWCNSGRA----QCHSVPVKSCS-EPRCFNGGTCQ   63 (91)
T ss_dssp             CCCCCCBCSSSCCBCC---SSCEE-EEECSS------SSCE--EEEECSSSCC----BCCEECEEECS-SCCSCTTCEEE
T ss_pred             CeeeECCCCCcCCeEC---CCccc-CCcccc------CCCC--cEeECCCCCc----ccccCcCCccc-CCCCCCCCEee
Confidence            5899999999999996   67886 566654      3444  9999999996    78622688996 88999999999


Q ss_pred             cCCCCCceEEecCCCCCCCCCCCCCCC
Q psy9686         708 ASPGDKQITCLCLKGFEGPHRELPVES  734 (769)
Q Consensus       708 nt~Gs~~y~C~C~~GytG~~Ce~dide  734 (769)
                      +..+.++|+|.|++||+|.+|+.+|||
T Consensus        64 ~~~~~~~~~C~C~~G~~G~~Ce~~ide   90 (91)
T 1tpg_A           64 QALYFSDFVCQCPEGFAGKSCEIDTRA   90 (91)
T ss_dssp             EESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred             cCCCCCCeEeECCCCCcCCcCCcCCCC
Confidence            986222399999999999999988875

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.27  E-value=1.6e-12  Score=120.49  Aligned_cols=92  Identities=22%  Similarity=0.511  Sum_probs=74.4

Q ss_pred             ccccC-CCCcccccCCCCCCCcccccccccccc---CCCCCCCCeEeeCCCCCceEeecCCCCeec-CCCccccCCcccc
Q psy9686         621 PLKDG-NLSFYCNCTEDFTGEYCQFENSAACVT---LNPCQNNATCVASPGDKQITCLCLKGGTVS-SEYCQFENSAACV  695 (769)
Q Consensus       621 ~C~n~-~gsy~C~C~~Gy~G~~Ce~~~ideC~~---~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~-G~~C~~~~ideC~  695 (769)
                      +|+++ .++|.|.|++||.|..++   +++|..   ..+|.  ++|++. ++  |+|.|++||+++ |..|+  ++|+|.
T Consensus        15 ~C~~~~~g~y~C~C~~Gy~g~~~~---~~~C~~~C~~~~C~--~~C~~~-~~--y~C~C~~Gy~~~~g~~C~--dideC~   84 (118)
T 1dx5_I           15 QCQPLDQTSYLCVCAEGFAPIPHE---PHRCQMFCNQTACP--ADCDPN-TQ--ASCECPEGYILDDGFICT--DIDECE   84 (118)
T ss_dssp             EEEECSSSCEEEECCTTEEEETTE---EEEEEECCCSSEEE--CEECTT-ST--TCEECCTTEEEETTTEEE--ECCHHH
T ss_pred             CCCCCCCCCEEeECCCCccccCCC---CCccccccCCCCCC--CcccCC-CC--eEeECCCCccCCCCCccc--cccccC
Confidence            58888 899999999999998653   455641   34454  689874 55  999999999976 78996  899997


Q ss_pred             CCCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         696 TLNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       696 s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                      ..++|  +++|+++.++  |+|.|++||+|.
T Consensus        85 ~~~~C--~~~C~n~~g~--y~C~C~~G~~g~  111 (118)
T 1dx5_I           85 NGGFC--SGVCHNLPGT--FECICGPDSALA  111 (118)
T ss_dssp             HCSSC--SSEEEECSSS--EEEEECSSSSCE
T ss_pred             CCCCC--cCeEEeCCCC--EEEECCCCCccC
Confidence            44899  6799999887  999999999864

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.24  E-value=1.4e-12  Score=124.81  Aligned_cols=129  Identities=22%  Similarity=0.451  Sum_probs=78.4

Q ss_pred             cccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCC----cccc--cchhccccCceeeeeeeecccCCCCCCCCC
Q psy9686         513 AALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSG----LEIT--PVYLWLMKLKTLVMVQYYFRRKSTSPHKSR  586 (769)
Q Consensus       513 ~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~C----edid--eC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~  586 (769)
                      .+||||.++||.+ |+|++++++   |+|.|++||+|..+    ++++  +|... ..+.   .|+..++.|...     
T Consensus         2 ~dideC~~~pC~n-g~C~n~~g~---y~C~C~~G~~g~~~~~~C~~~~~~~C~~~-~~g~---~C~~~~~~c~~~-----   68 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKNSPGS---FICECSSESTLDPTKTICIETIKGTCWQT-VIDG---RCEININGATLK-----   68 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEEETTE---EEEECCTTEEECTTSSBEEECCCEEEEEE-EETT---EEEEEEEEEECH-----
T ss_pred             CcCccCcCCCCCC-CEeECCCCC---EEeECCCCcccCCCCCeecCCCCCcccCC-CCCC---ccccCCCccccC-----
Confidence            3689999999986 699999987   99999999998754    2211  01000 0000   011111111000     


Q ss_pred             CCcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC---CCcccccccccccc-CCCCCCCCeE
Q psy9686         587 GQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT---GEYCQFENSAACVT-LNPCQNNATC  662 (769)
Q Consensus       587 g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~---G~~Ce~~~ideC~~-~~pC~n~gtC  662 (769)
                      ..|                   .  .......++.|..  -.|.|.|++||.   |..|+  +||+|.. +++|.+ ++|
T Consensus        69 ~~C-------------------~--~~~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C~--dideC~~~~~~C~~-g~C  122 (147)
T 2w86_A           69 SQC-------------------C--SSLGAAWGSPCTL--CQVDPICGKGYSRIKGTQCE--DIDECEVFPGVCKN-GLC  122 (147)
T ss_dssp             HHH-------------------H--TTTCSEETTTTEE--CCCCTTTCTTEEEEETTEEE--ECCHHHHSTTCSSS-SEE
T ss_pred             Ccc-------------------c--cCcCcccCCCccc--CCCcccCCCccccCCCCccC--ccccccCCCCCCCC-CEE
Confidence            000                   0  0000001122221  237899999994   89998  7999973 456986 599


Q ss_pred             eeCCCCCceEeecCCCCeec
Q psy9686         663 VASPGDKQITCLCLKGGTVS  682 (769)
Q Consensus       663 vnt~Gs~~y~C~C~~Gftg~  682 (769)
                      +++.++  |+|.|++||+++
T Consensus       123 ~n~~g~--y~C~C~~Gy~g~  140 (147)
T 2w86_A          123 VNTRGS--FKCQCPSGMTLD  140 (147)
T ss_dssp             EEETTE--EEEECCTTCCBC
T ss_pred             ECCCCC--EEeeCCCCCccC
Confidence            999887  999999999953

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.21  E-value=5.7e-12  Score=148.00  Aligned_cols=161  Identities=19%  Similarity=0.428  Sum_probs=111.7

Q ss_pred             CCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-cccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCccccc
Q psy9686         519 AGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-ITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITP  597 (769)
Q Consensus       519 ~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-ideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~  597 (769)
                      .+.+|.++|+|..       ..|.|++||+|..|+- ++.-                ........|...           
T Consensus       433 ~s~~Cs~~G~C~~-------g~C~C~~Gy~G~~Cec~~~~~----------------~~~~~~~~C~~~-----------  478 (687)
T 3k6s_B          433 DRSLCHGKGFLEC-------GICRCDTGYIGKNCECQTQGR----------------SSQELEGSCRKD-----------  478 (687)
T ss_dssp             CSSTGGGSEEESS-------SSEEECSSEESTTSCEESSSC----------------CCSGGGSTTSSS-----------
T ss_pred             CCCCCCCCCEEeC-------CEeEcCCCCcCCcccccCCcC----------------CccccCCCCCCC-----------
Confidence            5678999999983       3799999999999951 1100                000000011100           


Q ss_pred             ccccccccccceeeccccccCCCccccCCCCcccccC------CCCCCCcccccccccccc--CCCCCC--CCeEeeCCC
Q psy9686         598 VYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCT------EDFTGEYCQFENSAACVT--LNPCQN--NATCVASPG  667 (769)
Q Consensus       598 gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~------~Gy~G~~Ce~~~ideC~~--~~pC~n--~gtCvnt~G  667 (769)
                                   .....|.++|.|..+    .|.|.      +||.|..|+.+ .+.|..  ..+|.+  +|+|..  |
T Consensus       479 -------------~~~~~Cs~~G~C~~G----~C~C~~~~~~~~G~~G~~Ce~~-~~~C~~~~~~~C~~~~~G~C~~--g  538 (687)
T 3k6s_B          479 -------------NNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECD-TINCERYNGQVCGGPGRGLCFC--G  538 (687)
T ss_dssp             -------------TTSCGGGSSEEEETT----EEEECCCCSTTCCEESTTSCEE-SSCSCEETTEETSHHHHEEEET--T
T ss_pred             -------------CCCCcCCCCCEEeCC----EEEcCCCCCCCCCccccccccc-cccccCCCCcCcCCCCCCeEEC--C
Confidence                         001235677888843    89999      99999999864 667862  246988  899985  2


Q ss_pred             CCceEeecCCCCeecCCCcccc-CCccccCC--CCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCCCCC-CCC
Q psy9686         668 DKQITCLCLKGGTVSSEYCQFE-NSAACVTL--NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPS-EDE  743 (769)
Q Consensus       668 s~~y~C~C~~Gftg~G~~C~~~-~ideC~s~--~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~npC-~~G  743 (769)
                          .|.|.+||+  |..|+.. +.+.|...  .+|.++|+|+.      .+|.|.+||+|.+|+. ...|. ++| +++
T Consensus       539 ----~C~C~~G~~--G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~------g~C~C~~Gy~G~~Ce~-c~~C~-~~C~~~g  604 (687)
T 3k6s_B          539 ----KCRCHPGFE--GSACQCERTTEGCLNPRRVECSGRGRCRC------NVCECHSGYQLPLCQE-CPGCP-SPCGKYI  604 (687)
T ss_dssp             ----EEEECTTCC--STTSCSCCSSCTTBCTTCSBTSSSCCBCS------SCBCCSTTCCTTTTCC-CTTSC-CCCTTTH
T ss_pred             ----EEEcCCCCc--CCCCccCCCCCCCCCCCCCCCCCCCcCCC------CEEECCCCCcCCCCCC-CCCCC-cccCCCC
Confidence                699999999  8888731 35678621  37999999986      2799999999999985 34675 466 677


Q ss_pred             ceee
Q psy9686         744 TSVD  747 (769)
Q Consensus       744 tC~n  747 (769)
                      +|+.
T Consensus       605 ~Cv~  608 (687)
T 3k6s_B          605 SCAE  608 (687)
T ss_dssp             HHHT
T ss_pred             CCCc
Confidence            8763

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.16  E-value=1.7e-11  Score=108.51  Aligned_cols=64  Identities=22%  Similarity=0.462  Sum_probs=51.7

Q ss_pred             ccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCc
Q psy9686         623 KDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSA  692 (769)
Q Consensus       623 ~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~id  692 (769)
                      ++..++|.|.|++||+  .|+..++++|. .+||.++++|++..+.++|+|.|++||+  |..|+. ++|
T Consensus        26 ~n~~~~y~C~C~~G~~--~C~~~~~~~C~-~~pC~ngg~C~~~~~~~~~~C~C~~G~~--G~~Ce~-~id   89 (91)
T 1tpg_A           26 LRSNRVEYCWCNSGRA--QCHSVPVKSCS-EPRCFNGGTCQQALYFSDFVCQCPEGFA--GKSCEI-DTR   89 (91)
T ss_dssp             SSSSCEEEEECSSSCC--BCCEECEEECS-SCCSCTTCEEEEESSSSCEEEECCTTCB--SSSCCB-CSS
T ss_pred             ccCCCCcEeECCCCCc--ccccCcCCccc-CCCCCCCCEeecCCCCCCeEeECCCCCc--CCcCCc-CCC
Confidence            4456789999999998  88732488998 7899999999998622239999999999  899985 454

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.16  E-value=2.6e-11  Score=142.63  Aligned_cols=127  Identities=19%  Similarity=0.398  Sum_probs=98.5

Q ss_pred             cCCCccccCCCCcc---cccCCCCCCCccccccc--------cccccC---CCCCCCCeEeeCCCCCceEeecC----CC
Q psy9686         617 QNISPLKDGNLSFY---CNCTEDFTGEYCQFENS--------AACVTL---NPCQNNATCVASPGDKQITCLCL----KG  678 (769)
Q Consensus       617 ~ngg~C~n~~gsy~---C~C~~Gy~G~~Ce~~~i--------deC~~~---~pC~n~gtCvnt~Gs~~y~C~C~----~G  678 (769)
                      .++++|.++.|+|.   |.|.+||.|..|+.. +        ++|...   .+|.++|+|++      +.|.|+    +|
T Consensus       443 ~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~-~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~------g~C~C~~~~~~G  515 (690)
T 3fcs_B          443 PNSHRCNNGNGTFECGVCRCGPGWLGSQCECS-EEDYRPSQQDECSPREGQPVCSQRGECLC------GQCVCHSSDFGK  515 (690)
T ss_dssp             TTCTTTTTTSEEEETTEEEECTTCCSSSSCCS-CC------CCCCSSSSSSCGGGGSEEECS------SSEEECCCSSCC
T ss_pred             CCCCcccCCCCeEeCCceEeCCCccCCceeec-cCccCCccCCcCCCCCCCCCCCCCCEEEC------CeeEeecCCCCC
Confidence            45556665566666   999999999999864 3        568621   35999999984      469999    99


Q ss_pred             CeecCCCccccCCccccC--CCCCCCCCEEecCCCCCceEEecCCCCCCCCCC--CCCCCCCC---CCC-CCCceeeCCC
Q psy9686         679 GTVSSEYCQFENSAACVT--LNPCQNNATCVASPGDKQITCLCLKGFEGPHRE--LPVESVDE---PPS-EDETSVDLQL  750 (769)
Q Consensus       679 ftg~G~~C~~~~ideC~s--~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce--~dideC~~---npC-~~GtC~n~~g  750 (769)
                      |+  |..|+. ++++|..  ..+|.++|+|.+      ++|.|++||+|..|+  .++++|..   .+| ++|+|++.  
T Consensus       516 y~--G~~Ce~-~~~~C~~~~~~~C~~~G~C~~------g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g--  584 (690)
T 3fcs_B          516 IT--GKYCEC-DDFSCVRYKGEMCSGHGQCSC------GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG--  584 (690)
T ss_dssp             CB--STTSCB-CSSCCCBSSSSBGGGSEEEET------TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT--
T ss_pred             ee--CCCcCc-ccCcCcCCCCCCCCCCCEecC------CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC--
Confidence            99  999986 6778962  147999999986      489999999999998  67889986   567 78999762  


Q ss_pred             CccccC-C-CCccce
Q psy9686         751 GSQANS-Y-NWAHML  763 (769)
Q Consensus       751 gy~C~~-~-~w~~~l  763 (769)
                        +|.. . +|.|..
T Consensus       585 --~C~C~~~Gy~G~~  597 (690)
T 3fcs_B          585 --SCVCIQPGSYGDT  597 (690)
T ss_dssp             --EEECCSTTCBSTT
T ss_pred             --EEECCCCCccCCC
Confidence              6766 3 587753

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.15  E-value=4.2e-11  Score=103.81  Aligned_cols=74  Identities=28%  Similarity=0.708  Sum_probs=64.5

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCC
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEG  725 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG  725 (769)
                      ++|+|...++|.+ ++|+++.++  |+|.|++||+++|..|+  ++|+|...++|.+ ++|+++.++  |+|.|++||+|
T Consensus         4 dideC~~~~~C~~-g~C~n~~g~--y~C~C~~Gy~~~g~~C~--dideC~~~~~C~~-~~C~n~~g~--y~C~C~~G~~g   75 (82)
T 1emn_A            4 DMDECKEPDVCKH-GQCINTDGS--YRCECPFGYILAGNECV--DTDECSVGNPCGN-GTCKNVIGG--FECTCEEGFEP   75 (82)
T ss_dssp             CCCSSSSTTSCSS-SEECCCSSC--CCEECCTTEEEETTEEE--ECCGGGTCCTTSS-SCEEECSSS--EEECCSSSSCC
T ss_pred             ccccCCCCCCcCC-CEEEecCCC--EEEECCCCeECCCCccC--CcccccCCCCCCC-CEeECCCCC--EEeECCCCeEe
Confidence            6899974478986 899999887  99999999998899997  7999965689987 599999987  99999999998


Q ss_pred             CC
Q psy9686         726 PH  727 (769)
Q Consensus       726 ~~  727 (769)
                      ..
T Consensus        76 ~~   77 (82)
T 1emn_A           76 GP   77 (82)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.14  E-value=3.4e-12  Score=124.21  Aligned_cols=112  Identities=16%  Similarity=0.358  Sum_probs=77.6

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCee--cCCCccccCCcc--ccC-CCCC--CCCCEEecCCCC--CceE
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQFENSAA--CVT-LNPC--QNNATCVASPGD--KQIT  716 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~~~~ide--C~s-~~pC--~ngg~Cvnt~Gs--~~y~  716 (769)
                      +||+|...++|. +++|+++.++  |+|.|++||++  +|..|+  ++++  |.. .++|  .++++|++..+.  .+|+
T Consensus         2 dideC~~~~~C~-~~~C~n~~gs--y~C~C~~Gy~~~~~g~~C~--d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~   76 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGS--YICDCPPDFELNPTRVGCV--DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKAS   76 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTE--EEEECCTTCEECTTSSBEE--CCCCEEEEEEC----------CEEEEEEEECHHH
T ss_pred             ccccCCCCCCCC-CCEeECCCCC--EEEeCCCCCeECCCCCccc--CCCCCcccCCCcccCCCCCCcccCCcCCcccCce
Confidence            589997558997 6899999987  99999999997  488998  6666  852 2334  356788876540  1266


Q ss_pred             EecCCCCC---------------------------CC---CCCCCCCCCCCC--CCCCCceeeCCCCccccCCC-Cccc
Q psy9686         717 CLCLKGFE---------------------------GP---HRELPVESVDEP--PSEDETSVDLQLGSQANSYN-WAHM  762 (769)
Q Consensus       717 C~C~~Gyt---------------------------G~---~Ce~dideC~~n--pC~~GtC~n~~ggy~C~~~~-w~~~  762 (769)
                      |.|++||.                           |.   .+.++||||..+  +|.+++|+|+.++|+|...+ |++.
T Consensus        77 C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~  155 (162)
T 1uzk_A           77 CCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLN  155 (162)
T ss_dssp             HHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBC
T ss_pred             eeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCC
Confidence            66666554                           32   222589999864  58768999999999998774 7764

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.04  E-value=1.4e-10  Score=111.39  Aligned_cols=77  Identities=18%  Similarity=0.435  Sum_probs=59.8

Q ss_pred             CccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcC
Q psy9686         511 GAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQ  590 (769)
Q Consensus       511 gc~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~  590 (769)
                      .|.++|+|.++||.++|+|++.+++   |.|.|++||+|..|+++++|..                  .+.+|       
T Consensus        44 ~c~dideC~~~pC~n~g~C~~~~~~---y~C~C~~G~~G~~C~~~deC~~------------------~~~~C-------   95 (146)
T 1x7a_L           44 QYVDGDQCEPNPCLNGGLCKDDINS---YECWCQVGFEGKNCELDATCNI------------------KNGRC-------   95 (146)
T ss_dssp             ------CCSSCSSCTTCEEEECSSC---EEEECCSSEESTTTCEECCTTS------------------GGGSC-------
T ss_pred             cCCCcCcCCCCCCCCCCEeECCCCC---EEEecCCCCcCCcCCCCccccC------------------CCCCC-------
Confidence            3678999999999999999999887   9999999999999988887742                  11223       


Q ss_pred             CCcccccccccccccccceeeccccccCCCcc-ccCCCCcccccCCCCC----CCccc
Q psy9686         591 SGLEITPVYLWLMKMKTLVMVQYYLQQNISPL-KDGNLSFYCNCTEDFT----GEYCQ  643 (769)
Q Consensus       591 ~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C-~n~~gsy~C~C~~Gy~----G~~Ce  643 (769)
                                                .+  +| +++.++|.|.|++||.    |..|+
T Consensus        96 --------------------------~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L           96 --------------------------KQ--FCKTGADSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             --------------------------SS--BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred             --------------------------cC--CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence                                      22  57 8888999999999998    88888

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.00  E-value=2.3e-10  Score=99.14  Aligned_cols=72  Identities=26%  Similarity=0.617  Sum_probs=60.2

Q ss_pred             ccccCCCCC-CCCCCCcEEeeCCCCccceEeeCCCCCc--CCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCC
Q psy9686         512 AAALGGCAG-RPCRNNGTCTPVSGGVVNFTCTCPSGGQ--GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQ  588 (769)
Q Consensus       512 c~dideC~s-~PC~ngGtCvn~~gs~~~y~C~C~~Gft--G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~  588 (769)
                      |.++|+|.. +||.+ ++|++++++   |+|.|++||+  |..|++++||..                   .++|     
T Consensus         2 C~dideC~~~~~C~~-g~C~n~~g~---y~C~C~~Gy~~~g~~C~dideC~~-------------------~~~C-----   53 (82)
T 1emn_A            2 AVDMDECKEPDVCKH-GQCINTDGS---YRCECPFGYILAGNECVDTDECSV-------------------GNPC-----   53 (82)
T ss_dssp             CCCCCSSSSTTSCSS-SEECCCSSC---CCEECCTTEEEETTEEEECCGGGT-------------------CCTT-----
T ss_pred             CCccccCCCCCCcCC-CEEEecCCC---EEEECCCCeECCCCccCCcccccC-------------------CCCC-----
Confidence            568999985 89986 899999887   9999999997  888988888842                   4455     


Q ss_pred             cCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCC
Q psy9686         589 GQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGE  640 (769)
Q Consensus       589 C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~  640 (769)
                                                  .+ ++|+++.++|.|.|++||.|.
T Consensus        54 ----------------------------~~-~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A           54 ----------------------------GN-GTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             ----------------------------SS-SCEEECSSSEEECCSSSSCCC
T ss_pred             ----------------------------CC-CEeECCCCCEEeECCCCeEeC
Confidence                                        22 368889999999999999875

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.99  E-value=2e-11  Score=116.82  Aligned_cols=103  Identities=25%  Similarity=0.512  Sum_probs=66.7

Q ss_pred             CccccCCCCcccccCCCCCCCc----ccccccc---------cccc-CCCCCCCCeEeeCCCC--------CceEeecCC
Q psy9686         620 SPLKDGNLSFYCNCTEDFTGEY----CQFENSA---------ACVT-LNPCQNNATCVASPGD--------KQITCLCLK  677 (769)
Q Consensus       620 g~C~n~~gsy~C~C~~Gy~G~~----Ce~~~id---------eC~~-~~pC~n~gtCvnt~Gs--------~~y~C~C~~  677 (769)
                      ++|+++.++|.|.|++||+|..    |......         .|.. .+.|...+.|.+..+.        -.|.|.|++
T Consensus        15 g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~   94 (147)
T 2w86_A           15 GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPICGK   94 (147)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTEECCCCTTTCT
T ss_pred             CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcccCCCcccCCC
Confidence            4688888999999999998653    3211000         1110 0111111122222221        016789999


Q ss_pred             CCee-cCCCccccCCccccC-CCCCCCCCEEecCCCCCceEEecCCCCCCCC
Q psy9686         678 GGTV-SSEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGFEGPH  727 (769)
Q Consensus       678 Gftg-~G~~C~~~~ideC~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~  727 (769)
                      ||++ +|..|+  ++|+|.. +++|.++ +|+++.++  |+|.|++||+|..
T Consensus        95 Gy~~~~g~~C~--dideC~~~~~~C~~g-~C~n~~g~--y~C~C~~Gy~g~~  141 (147)
T 2w86_A           95 GYSRIKGTQCE--DIDECEVFPGVCKNG-LCVNTRGS--FKCQCPSGMTLDA  141 (147)
T ss_dssp             TEEEEETTEEE--ECCHHHHSTTCSSSS-EEEEETTE--EEEECCTTCCBCT
T ss_pred             ccccCCCCccC--ccccccCCCCCCCCC-EEECCCCC--EEeeCCCCCccCC
Confidence            9975 589998  8999962 4569864 99999987  9999999998764

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.98  E-value=2.2e-10  Score=100.38  Aligned_cols=79  Identities=34%  Similarity=0.746  Sum_probs=66.9

Q ss_pred             cccccccCCC--CCCCCeEeeCCCCCceEeecCCCCeec--CCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCC
Q psy9686         646 NSAACVTLNP--CQNNATCVASPGDKQITCLCLKGGTVS--SEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLK  721 (769)
Q Consensus       646 ~ideC~~~~p--C~n~gtCvnt~Gs~~y~C~C~~Gftg~--G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~  721 (769)
                      ++|+|. ..+  | ++++|+++.++  |+|.|++||+++  |..|+  ++|+|. .++|.  ++|+++.++  |+|.|+ 
T Consensus         2 dideC~-~~~~~C-~~~~C~n~~g~--y~C~C~~G~~~~~~g~~C~--dideC~-~~~C~--~~C~n~~g~--y~C~C~-   69 (87)
T 1z6c_A            2 DVDECS-LKPSIC-GTAVCKNIPGD--FECECPEGYRYNLKSKSCE--DIDECS-ENMCA--QLCVNYPGG--YTCYCD-   69 (87)
T ss_dssp             CSCSSS-SSSSSB-TTSSCCCBTTB--CCCSSSTTCEEETTTTEEE--CCCHHH-HSCCS--SEECCCSSS--CCEECC-
T ss_pred             cccccc-CCCCCC-CCCEeECCCCC--EEEECCCCceECCCCCcCC--CcCeeC-CCCCC--CEEEccCCC--EEEECC-
Confidence            478997 444  8 78899999877  999999999964  78897  899996 78997  599999987  999998 


Q ss_pred             CCCCCCCCCCCCCCC
Q psy9686         722 GFEGPHRELPVESVD  736 (769)
Q Consensus       722 GytG~~Ce~dideC~  736 (769)
                      |+.|..++.+.++|.
T Consensus        70 g~~G~~~~~~~~~C~   84 (87)
T 1z6c_A           70 GKKGFKLAQDQKSCE   84 (87)
T ss_dssp             SSSCCBCCTTSSSCB
T ss_pred             CCcCCcccCCCCcce
Confidence            888888887777665

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.97  E-value=1e-09  Score=122.76  Aligned_cols=103  Identities=22%  Similarity=0.474  Sum_probs=72.0

Q ss_pred             cCCCccccCCCCcccccCCCCCCCccccc-c--------ccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcc
Q psy9686         617 QNISPLKDGNLSFYCNCTEDFTGEYCQFE-N--------SAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       617 ~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~-~--------ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~  687 (769)
                      .++++|.+  +++.|.|++||.|..|+.. +        .++|....+|.+++.|..  +.  |+|.|++||+  |..|+
T Consensus       206 ~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~--~~--~~C~C~~G~~--G~~C~  277 (423)
T 2gy5_A          206 MNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLP--DP--YGCSCATGWK--GLQCN  277 (423)
T ss_dssp             CTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEET--TT--TEEECCBTCB--SGGGC
T ss_pred             CCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECC--CC--CeEEeCCCcc--ccccc
Confidence            34455654  3568999999999988842 0        024543456888888963  33  8999999999  88887


Q ss_pred             cc-----CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCC
Q psy9686         688 FE-----NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       688 ~~-----~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~di  732 (769)
                      ..     .-+.|....+|.++++|.+.     +.|.|++||+|.+|+...
T Consensus       278 ~~C~~G~~G~~C~~~C~C~ngg~C~~~-----~~C~C~~G~~G~~Ce~~~  322 (423)
T 2gy5_A          278 EACHPGFYGPDCKLRCSCNNGEMCDRF-----QGCLCSPGWQGLQCEREG  322 (423)
T ss_dssp             BCCCTTBCSBTTCCBCCCTTCCEEETT-----TEEECCTTCBSTTSCBCS
T ss_pred             CccCCCCcCCcccccccCCCCCEecCC-----CceECCCCCcCCCCccCc
Confidence            30     01234222378999999976     359999999999998653

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.91  E-value=7.2e-10  Score=105.83  Aligned_cols=84  Identities=23%  Similarity=0.576  Sum_probs=68.1

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCC---EEecCCC-CCceEEecCC
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNA---TCVASPG-DKQITCLCLK  721 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg---~Cvnt~G-s~~y~C~C~~  721 (769)
                      ++|+|. .++|.++++|+++.++  |+|.|++||+  |..|+. ++++|. ..+|.+++   +|+++.+ +  |+|.|++
T Consensus        46 did~C~-~~pC~n~g~C~~~~g~--y~C~C~~G~~--G~~C~~-~~~~c~-~c~~~~~~C~~~C~~~~g~~--y~C~C~~  116 (142)
T 2c4f_L           46 DGDQCA-SSPCQNGGSCKDQLQS--YICFCLPAFE--GRNCET-HKDDQL-ICVNENGGCEQYCSDHTGTK--RSCRCHE  116 (142)
T ss_dssp             TCCGGG-GCCCCTTCEEEEETTE--EEEECCTTEE--STTSCE-EGGGCC-STTTGGGGCSSEEECCTTSC--CEEECCT
T ss_pred             ccCcCc-CCCcCCCCEEeCCCCC--EEeeCCCCcc--CCcccc-Cccccc-cccCCCCCccCEeECCCCCC--EEEECCC
Confidence            688998 7999999999999876  9999999999  999984 356763 34455555   9999988 6  9999999


Q ss_pred             CCC----CCCCCCCCCC--CCCCC
Q psy9686         722 GFE----GPHRELPVES--VDEPP  739 (769)
Q Consensus       722 Gyt----G~~Ce~dide--C~~np  739 (769)
                      ||+    |.+|+ ++++  |...|
T Consensus       117 Gy~l~~dG~~C~-~~~e~pCg~~p  139 (142)
T 2c4f_L          117 GYSLLADGVSCT-PTVEYPCGKIP  139 (142)
T ss_dssp             TEEECTTSSCEE-ESSSSCTTCCT
T ss_pred             CceECCCCCCCC-CCCccCCCCCC
Confidence            999    99996 5554  55544

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.91  E-value=7e-10  Score=105.89  Aligned_cols=80  Identities=20%  Similarity=0.407  Sum_probs=62.5

Q ss_pred             ccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-cccchhccccCceeeeeeeecccCCCCCCCCCCCcC
Q psy9686         512 AAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-ITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQ  590 (769)
Q Consensus       512 c~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-ideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~  590 (769)
                      +.++|+|.++||.++|+|+++.++   |.|.|++||+|..|++ +++|                    .+.+|.++ .  
T Consensus        44 c~did~C~~~pC~n~g~C~~~~g~---y~C~C~~G~~G~~C~~~~~~c--------------------~~c~~~~~-~--   97 (142)
T 2c4f_L           44 YSDGDQCASSPCQNGGSCKDQLQS---YICFCLPAFEGRNCETHKDDQ--------------------LICVNENG-G--   97 (142)
T ss_dssp             HTTCCGGGGCCCCTTCEEEEETTE---EEEECCTTEESTTSCEEGGGC--------------------CSTTTGGG-G--
T ss_pred             CCccCcCcCCCcCCCCEEeCCCCC---EEeeCCCCccCCccccCcccc--------------------ccccCCCC-C--
Confidence            467899999999999999999887   9999999999999975 5554                    12223111 0  


Q ss_pred             CCcccccccccccccccceeeccccccCCCccccCCC-CcccccCCCCC----CCcccc
Q psy9686         591 SGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNL-SFYCNCTEDFT----GEYCQF  644 (769)
Q Consensus       591 ~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~g-sy~C~C~~Gy~----G~~Ce~  644 (769)
                                               |.  .+|+++.+ +|.|.|++||.    |..|+.
T Consensus        98 -------------------------C~--~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~  129 (142)
T 2c4f_L           98 -------------------------CE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTP  129 (142)
T ss_dssp             -------------------------CS--SEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred             -------------------------cc--CEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence                                     11  16888888 99999999998    889983

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.89  E-value=6.8e-10  Score=102.03  Aligned_cols=95  Identities=22%  Similarity=0.337  Sum_probs=62.2

Q ss_pred             ccccCCCCCCC--------CCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccchhccccCceeeeeeeecccCCCCCC
Q psy9686         512 AAALGGCAGRP--------CRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPH  583 (769)
Q Consensus       512 c~dideC~s~P--------C~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC  583 (769)
                      +.|+|+|..+|        |.++|+|+++.++   |+|.|++||+|..|+++++.                 ++|...+ 
T Consensus         3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~---y~C~C~~G~~G~~C~~~~~~-----------------~~C~~~~-   61 (114)
T 1aut_L            3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGS---FSCDCRSGWEGRFCQREVSF-----------------LNCSLDN-   61 (114)
T ss_dssp             -----CCCCCSSCCSSSSTTTTSEEECCCSSC---CCEEECTTEESTTSCEECCS-----------------SSSSSGG-
T ss_pred             ceecccccCCCccccccccCCCcCCCCCCCCC---cEeeCCCCCcCCCcCcCCcC-----------------CcCcCCC-
Confidence            46789999999        9999999999887   99999999999999764321                 1111110 


Q ss_pred             CCCCCcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC----CCccccccccccccCCCCCCC
Q psy9686         584 KSRGQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT----GEYCQFENSAACVTLNPCQNN  659 (769)
Q Consensus       584 ~~~g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~----G~~Ce~~~ideC~~~~pC~n~  659 (769)
                         +.                           |.  .+|+++.++|.|.|++||.    |..|+.     .. ..+|.++
T Consensus        62 ---~~---------------------------C~--~~C~n~~g~y~C~C~~G~~~~~~g~~C~~-----~~-~~pC~~~  103 (114)
T 1aut_L           62 ---GG---------------------------CT--HYCLEEVGWRRCSCAPGYKLGDDLLQCHP-----AV-KFPCGRP  103 (114)
T ss_dssp             ---GG---------------------------CS--SEEEECSSSEEEECCTTEEECTTSSCEEE-----CS-SSCTTCC
T ss_pred             ---CC---------------------------CC--CEeECCCCCEEeECCCCeeECCCCCccCc-----Cc-ccCCCCC
Confidence               00                           11  1688999999999999998    456652     11 4578887


Q ss_pred             CeEeeC
Q psy9686         660 ATCVAS  665 (769)
Q Consensus       660 gtCvnt  665 (769)
                      +.|+..
T Consensus       104 ~~~i~~  109 (114)
T 1aut_L          104 WKRMEK  109 (114)
T ss_dssp             C-----
T ss_pred             CccCCC
Confidence            777654

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.89  E-value=1.6e-09  Score=121.20  Aligned_cols=140  Identities=21%  Similarity=0.334  Sum_probs=87.3

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-cccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCcccccccc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-ITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYL  600 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-ideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~gy~  600 (769)
                      ||.++|+|.+.  +   +.|.|++||+|..|+. .++...              ...|. .+|...              
T Consensus       204 ~C~~~G~C~~~--~---g~C~C~~G~~G~~Ce~~C~~g~~--------------g~~C~-~~C~~~--------------  249 (423)
T 2gy5_A          204 ACMNNGVCHED--T---GECICPPGFMGRTCEKACELHTF--------------GRTCK-ERCSGQ--------------  249 (423)
T ss_dssp             CCCTTCEECTT--T---CCEECCTTEESTTSCEECCTTEE--------------STTSC-EECCST--------------
T ss_pred             CCCCCCEEECC--C---CcEeCCCCccCCCcccccCCCCC--------------CCCcC-ccCCCC--------------
Confidence            89999999872  3   6899999999999964 222210              01111 112111              


Q ss_pred             cccccccceeeccccccCCCccccCCCCcccccCCCCCCCccccc-----cccccccCCCCCCCCeEeeCCCCCceEeec
Q psy9686         601 WLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFE-----NSAACVTLNPCQNNATCVASPGDKQITCLC  675 (769)
Q Consensus       601 ~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~-----~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C  675 (769)
                                   ..|.+++.|.  .++|.|.|++||.|..|+..     .-+.|...-+|.++++|.+.     +.|.|
T Consensus       250 -------------~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~-----~~C~C  309 (423)
T 2gy5_A          250 -------------EGCKSYVFCL--PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRF-----QGCLC  309 (423)
T ss_dssp             -------------TTTTTCCEEE--TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETT-----TEEEC
T ss_pred             -------------CCCCCCCEEC--CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCC-----CceEC
Confidence                         1234455664  45788999999999888731     00223222368999999875     35999


Q ss_pred             CCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         676 LKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       676 ~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      ++||+  |..|+.. ....  ..+     ..... .+   .|.|.+||.|..|+
T Consensus       310 ~~G~~--G~~Ce~~-~~~~--~~~-----~~~~~-~~---~~~c~~g~~g~~C~  349 (423)
T 2gy5_A          310 SPGWQ--GLQCERE-GIPR--MTP-----KIVDL-PD---HIEVNSGKFNPICK  349 (423)
T ss_dssp             CTTCB--STTSCBC-SSCC--CCC-----EECSC-CS---BCCEESEEECCEEE
T ss_pred             CCCCc--CCCCccC-ccCC--cCc-----ceecC-CC---eEEeCCCccCCccc
Confidence            99999  8999841 1111  111     22222 22   58999999998886

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.87  E-value=7.9e-10  Score=96.49  Aligned_cols=71  Identities=20%  Similarity=0.463  Sum_probs=57.2

Q ss_pred             ccCCCCCCC--CCCCcEEeeCCCCccceEeeCCCCCc-----CCCCcccccchhccccCceeeeeeeecccCCCCCCCCC
Q psy9686         514 ALGGCAGRP--CRNNGTCTPVSGGVVNFTCTCPSGGQ-----GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSR  586 (769)
Q Consensus       514 dideC~s~P--C~ngGtCvn~~gs~~~y~C~C~~Gft-----G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~  586 (769)
                      |||||..+|  |.+ ++|++++++   |+|.|++||+     |..|++||||..                  .+.+|   
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~---y~C~C~~Gy~~~~~~g~~C~dideC~~------------------~~~~C---   56 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGD---FECKCDEGYESGFMMMKNCMDIDECQR------------------DPLLC---   56 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTE---EEECCCSSEEECTTTSSSEEECCHHHH------------------CSSTT---
T ss_pred             ccccccCCCCCCCC-CEEECCCCC---EEeeCCCCcCccCCCCCccCCcccccC------------------CCCcC---
Confidence            689998766  976 599999987   9999999997     778999998853                  11123   


Q ss_pred             CCcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCC
Q psy9686         587 GQGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGE  640 (769)
Q Consensus       587 g~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~  640 (769)
                                                    . +++|+++.++|.|.|++||.+.
T Consensus        57 ------------------------------~-~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A           57 ------------------------------R-GGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             ------------------------------T-TSEEEEETTEEEEESCTTSCCC
T ss_pred             ------------------------------C-CCEeEcCCCCEEEECcCCcccC
Confidence                                          2 2568999999999999999875

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.86  E-value=1.2e-09  Score=95.36  Aligned_cols=72  Identities=26%  Similarity=0.705  Sum_probs=59.5

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCeec---CCCccccCCccccCCCC--CCCCCEEecCCCCCceEEec
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTVS---SEYCQFENSAACVTLNP--CQNNATCVASPGDKQITCLC  719 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~---G~~C~~~~ideC~s~~p--C~ngg~Cvnt~Gs~~y~C~C  719 (769)
                      ++|+|.. +++|.+ ++|+++.++  |+|.|++||++.   |..|+  ++|+|. .++  |. +++|+++.|+  |+|.|
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~--y~C~C~~Gy~~~~~~g~~C~--dideC~-~~~~~C~-~~~C~n~~g~--y~C~C   72 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGD--FECKCDEGYESGFMMMKNCM--DIDECQ-RDPLLCR-GGVCHNTEGS--YRCEC   72 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTE--EEECCCSSEEECTTTSSSEE--ECCHHH-HCSSTTT-TSEEEEETTE--EEEES
T ss_pred             ccccccCCCCCCCC-CEEECCCCC--EEeeCCCCcCccCCCCCccC--Cccccc-CCCCcCC-CCEeEcCCCC--EEEEC
Confidence            5789973 345975 599999887  999999999863   78998  899996 444  76 4799999987  99999


Q ss_pred             CCCCCCC
Q psy9686         720 LKGFEGP  726 (769)
Q Consensus       720 ~~GytG~  726 (769)
                      ++||+|.
T Consensus        73 ~~G~~~~   79 (86)
T 1lmj_A           73 PPGHQLS   79 (86)
T ss_dssp             CTTSCCC
T ss_pred             cCCcccC
Confidence            9999875

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.86  E-value=3.1e-10  Score=114.20  Aligned_cols=87  Identities=25%  Similarity=0.523  Sum_probs=30.0

Q ss_pred             CccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-c-ccchhccccCceeeeeeeecccCCCCCCCCCCC
Q psy9686         511 GAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-I-TPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQ  588 (769)
Q Consensus       511 gc~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-i-deC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~  588 (769)
                      .|.++++|.++||.++|+|++..++   |.|.|++||+|..|++ + ++|..                  .+.+|     
T Consensus        38 ~c~dideC~~~pC~ngg~C~n~~g~---y~C~C~~Gf~G~~Ce~~i~deC~~------------------~~~~C-----   91 (195)
T 1nfu_B           38 KYKDGDQCETSPCQNQGKCKDGLGE---YTCTCLEGFEGKNCELFTRKLCSL------------------DNGDC-----   91 (195)
T ss_dssp             ----------------------------------------------CCGGGT------------------GGGGC-----
T ss_pred             cCCCCcccCCCCCCCCCEeECCCCC---eeEeCCCCceeccccccccccccC------------------CCCCC-----
Confidence            3678999999999999999999887   9999999999999976 5 67742                  11223     


Q ss_pred             cCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC----CCccccccccccccCCCCCCC
Q psy9686         589 GQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT----GEYCQFENSAACVTLNPCQNN  659 (769)
Q Consensus       589 C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~----G~~Ce~~~ideC~~~~pC~n~  659 (769)
                                                  .+  .|++..++|.|.|++||.    |..|+..  +    ..||.+.
T Consensus        92 ----------------------------~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~--~----~~PC~~~  130 (195)
T 1nfu_B           92 ----------------------------DQ--FCHEEQNSVVCSCARGYTLADNGKACIPT--G----PYPCGKQ  130 (195)
T ss_dssp             ----------------------------SS--EEEEETTEEEEECCTTEEECTTSSCEEES--S----SSCTTCC
T ss_pred             ----------------------------CC--EeECCCCCeEEECCCCceeCCCCCccccC--C----CCCCCCC
Confidence                                        22  588888999999999999    8899832  1    3566654

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.84  E-value=1.2e-09  Score=104.85  Aligned_cols=81  Identities=22%  Similarity=0.578  Sum_probs=63.6

Q ss_pred             CccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccC-CCCCCCCCEE-ecCCCCCceEE
Q psy9686         640 EYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVT-LNPCQNNATC-VASPGDKQITC  717 (769)
Q Consensus       640 ~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s-~~pC~ngg~C-vnt~Gs~~y~C  717 (769)
                      ..|.  ++|+|. +++|.++++|++..++  |+|.|++||+  |..|+  ++|+|.. ..+|.+  +| +++.|+  |+|
T Consensus        43 ~~c~--dideC~-~~pC~n~g~C~~~~~~--y~C~C~~G~~--G~~C~--~~deC~~~~~~C~~--~C~~n~~g~--y~C  109 (146)
T 1x7a_L           43 KQYV--DGDQCE-PNPCLNGGLCKDDINS--YECWCQVGFE--GKNCE--LDATCNIKNGRCKQ--FCKTGADSK--VLC  109 (146)
T ss_dssp             ---------CCS-SCSSCTTCEEEECSSC--EEEECCSSEE--STTTC--EECCTTSGGGSCSS--BCCCCSSSC--CCC
T ss_pred             ccCC--CcCcCC-CCCCCCCCEeECCCCC--EEEecCCCCc--CCcCC--CCccccCCCCCCcC--CCCCCCCCC--EEe
Confidence            3565  689998 8999999999999877  9999999999  89998  5689963 246876  89 998887  999


Q ss_pred             ecCCCCC----CCCCCCCCCC
Q psy9686         718 LCLKGFE----GPHRELPVES  734 (769)
Q Consensus       718 ~C~~Gyt----G~~Ce~dide  734 (769)
                      .|++||+    |.+|+ ++++
T Consensus       110 ~C~~Gy~l~~dG~~C~-~~~~  129 (146)
T 1x7a_L          110 SCTTGYRLAPDQKSCK-PAVP  129 (146)
T ss_dssp             BCCTTEEECTTSSSEE-ECSS
T ss_pred             EcCCCcEeCCCCCcCC-CCCC
Confidence            9999998    89996 5554

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.83  E-value=4.4e-10  Score=106.35  Aligned_cols=78  Identities=26%  Similarity=0.513  Sum_probs=25.2

Q ss_pred             CccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-c-ccchhccccCceeeeeeeecccCCCCCCCCCCC
Q psy9686         511 GAAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-I-TPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQ  588 (769)
Q Consensus       511 gc~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-i-deC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~  588 (769)
                      .|.++|+|.++||.++|+|++..++   |.|.|++||+|..|++ + ++|..                  .+.+|     
T Consensus        38 ~c~d~d~C~~~pC~n~g~C~~~~~~---y~C~C~~G~~G~~C~~~i~d~C~~------------------~~~~C-----   91 (134)
T 2vh0_B           38 KYKDGDQCETSPCQNQGKCKDGLGE---YTCTCLEGFEGKNCELFTRKLCSL------------------DNGDC-----   91 (134)
T ss_dssp             ----------------------------------------------CCGGGT------------------GGGGC-----
T ss_pred             cCCCcCcCCCCCCCCcCCcccCCCC---EEeeCCCCccCCccccCCCCcccc------------------CCCCC-----
Confidence            3678899999999999999998887   9999999999999976 5 66732                  01122     


Q ss_pred             cCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC----CCcccc
Q psy9686         589 GQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT----GEYCQF  644 (769)
Q Consensus       589 C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~----G~~Ce~  644 (769)
                                                  .+  +|+++.++|.|.|++||.    |..|+.
T Consensus        92 ----------------------------~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           92 ----------------------------DQ--FCHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             ----------------------------SS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ----------------------------CC--EeECCCCCEEEECCCCcEECCCCCccCc
Confidence                                        22  578888999999999999    888983

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.82  E-value=1.3e-09  Score=124.90  Aligned_cols=102  Identities=19%  Similarity=0.294  Sum_probs=37.0

Q ss_pred             cccCCCCccc-ccCCCCCCCccccccccccccCCCCCCCCeEeeCCC--CCceEeecCCCCeecCCCccc---------c
Q psy9686         622 LKDGNLSFYC-NCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPG--DKQITCLCLKGGTVSSEYCQF---------E  689 (769)
Q Consensus       622 C~n~~gsy~C-~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~G--s~~y~C~C~~Gftg~G~~C~~---------~  689 (769)
                      |.....++.| .|.+||.|..|+  ..+.|. ..+|.++++|.+...  ...+.|.|++||+  |..|+.         .
T Consensus       411 C~~g~~G~~C~~C~~Gy~G~~c~--~~~~C~-~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~--G~~Ce~C~~G~~g~~~  485 (525)
T 4aqs_A          411 CKLHVEGERCDVCKEGFYDLSAE--DPYGCK-SCACNPLGTIPGGNPCDSETGYCYCKRLVT--GQRCDQCLPQHWGLSN  485 (525)
T ss_dssp             BCTTEETTTTCEECTTEECCCTT--STTSSE-ECCCCTTTBCCSSCCBCTTTCCBCBCTTCC--STTTCC----------
T ss_pred             CCCCCCCCcccCCCCCCcCCCCC--CCCCCc-cCCCCCCceecCCCcccCCCCEEECCCCCc--CCCcccCCCCccCCCC
Confidence            3333334555 477777776665  345565 556666666544210  1125799999999  888862         1


Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      +++.|. +.+|.+++.|...-....++|.|++||+|.+|+
T Consensus       486 ~~~~C~-~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          486 DLDGCR-PCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             ----------------------------------------
T ss_pred             CCCCCc-CCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence            456675 678888877655422223589999999999997

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.81  E-value=2.9e-09  Score=125.09  Aligned_cols=123  Identities=23%  Similarity=0.513  Sum_probs=92.3

Q ss_pred             ccCCCccccCCCCcccccCCCCCCCcccccccc---------cccc---CCCCCCCCeEeeCCCCCceEeecC------C
Q psy9686         616 QQNISPLKDGNLSFYCNCTEDFTGEYCQFENSA---------ACVT---LNPCQNNATCVASPGDKQITCLCL------K  677 (769)
Q Consensus       616 c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~id---------eC~~---~~pC~n~gtCvnt~Gs~~y~C~C~------~  677 (769)
                      |.++|+|..    ..|.|.+||.|..|+.. ++         .|..   ..+|.++|+|+.  |    .|.|.      +
T Consensus       437 Cs~~G~C~~----g~C~C~~Gy~G~~Cec~-~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G----~C~C~~~~~~~~  505 (687)
T 3k6s_B          437 CHGKGFLEC----GICRCDTGYIGKNCECQ-TQGRSSQELEGSCRKDNNSIICSGLGDCVC--G----QCLCHTSDVPGK  505 (687)
T ss_dssp             GGGSEEESS----SSEEECSSEESTTSCEE-SSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T----EEEECCCCSTTC
T ss_pred             CCCCCEEeC----CEeEcCCCCcCCccccc-CCcCCccccCCCCCCCCCCCcCCCCCEEeC--C----EEEcCCCCCCCC
Confidence            455667763    37999999999999853 22         4752   235999999984  2    79999      9


Q ss_pred             CCeecCCCccccCCccccC--CCCCCC--CCEEecCCCCCceEEecCCCCCCCCCCC--CCCCCCCC---CC-CCCceee
Q psy9686         678 GGTVSSEYCQFENSAACVT--LNPCQN--NATCVASPGDKQITCLCLKGFEGPHREL--PVESVDEP---PS-EDETSVD  747 (769)
Q Consensus       678 Gftg~G~~C~~~~ideC~s--~~pC~n--gg~Cvnt~Gs~~y~C~C~~GytG~~Ce~--dideC~~n---pC-~~GtC~n  747 (769)
                      ||+  |..|+. +.+.|..  ..+|.+  +|+|..  |    +|.|++||+|..|+.  +++.|..+   +| ++|+|.+
T Consensus       506 G~~--G~~Ce~-~~~~C~~~~~~~C~~~~~G~C~~--g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~  576 (687)
T 3k6s_B          506 LIY--GQYCEC-DTINCERYNGQVCGGPGRGLCFC--G----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC  576 (687)
T ss_dssp             CEE--STTSCE-ESSCSCEETTEETSHHHHEEEET--T----EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS
T ss_pred             Ccc--cccccc-ccccccCCCCcCcCCCCCCeEEC--C----EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC
Confidence            999  999985 5678851  236988  899985  2    899999999999983  46788874   67 7889987


Q ss_pred             CCCCccccCC-CCccc
Q psy9686         748 LQLGSQANSY-NWAHM  762 (769)
Q Consensus       748 ~~ggy~C~~~-~w~~~  762 (769)
                          .+|... +|.|.
T Consensus       577 ----g~C~C~~Gy~G~  588 (687)
T 3k6s_B          577 ----NVCECHSGYQLP  588 (687)
T ss_dssp             ----SCBCCSTTCCTT
T ss_pred             ----CEEECCCCCcCC
Confidence                356655 47775

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.79  E-value=1.4e-09  Score=95.09  Aligned_cols=76  Identities=21%  Similarity=0.510  Sum_probs=60.1

Q ss_pred             ccCCCCCCC--CCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccchhccccCceeeeeeeecccCCCCCCCCCC
Q psy9686         514 ALGGCAGRP--CRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRG  587 (769)
Q Consensus       514 dideC~s~P--C~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g  587 (769)
                      ++|||..+|  | ++++|++++++   |+|.|++||+    |..|++++||.                    .+||.   
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~---y~C~C~~G~~~~~~g~~C~dideC~--------------------~~~C~---   54 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGD---FECECPEGYRYNLKSKSCEDIDECS--------------------ENMCA---   54 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTB---CCCSSSTTCEEETTTTEEECCCHHH--------------------HSCCS---
T ss_pred             ccccccCCCCCC-CCCEeECCCCC---EEEECCCCceECCCCCcCCCcCeeC--------------------CCCCC---
Confidence            689998887  8 78999999887   9999999998    78898888884                    34552   


Q ss_pred             CcCCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCCcccccccccc
Q psy9686         588 QGQSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGEYCQFENSAAC  650 (769)
Q Consensus       588 ~C~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC  650 (769)
                                                      ++|+++.++|.|.|+ |+.|..++.+ ...|
T Consensus        55 --------------------------------~~C~n~~g~y~C~C~-g~~G~~~~~~-~~~C   83 (87)
T 1z6c_A           55 --------------------------------QLCVNYPGGYTCYCD-GKKGFKLAQD-QKSC   83 (87)
T ss_dssp             --------------------------------SEECCCSSSCCEECC-SSSCCBCCTT-SSSC
T ss_pred             --------------------------------CEEEccCCCEEEECC-CCcCCcccCC-CCcc
Confidence                                            358888999999998 7777766642 3344

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.77  E-value=4.6e-09  Score=96.44  Aligned_cols=90  Identities=23%  Similarity=0.553  Sum_probs=61.1

Q ss_pred             cccccccCCC--------CCCCCeEeeCCCCCceEeecCCCCeecCCCccccC-CccccC-CCCCCCCCEEecCCCCCce
Q psy9686         646 NSAACVTLNP--------CQNNATCVASPGDKQITCLCLKGGTVSSEYCQFEN-SAACVT-LNPCQNNATCVASPGDKQI  715 (769)
Q Consensus       646 ~ideC~~~~p--------C~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~-ideC~s-~~pC~ngg~Cvnt~Gs~~y  715 (769)
                      ++|+|. ..|        |.++++|+++.++  |+|.|++||+  |..|+..+ +++|.. ...|.+  +|+++.++  |
T Consensus         5 d~d~C~-~~p~~~~C~~~C~~~g~C~~~~~~--y~C~C~~G~~--G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~--y   75 (114)
T 1aut_L            5 DGDQCL-VLPLEHPCASLCCGHGTCIDGIGS--FSCDCRSGWE--GRFCQREVSFLNCSLDNGGCTH--YCLEEVGW--R   75 (114)
T ss_dssp             ---CCC-CCSSCCSSSSTTTTSEEECCCSSC--CCEEECTTEE--STTSCEECCSSSSSSGGGGCSS--EEEECSSS--E
T ss_pred             eccccc-CCCccccccccCCCcCCCCCCCCC--cEeeCCCCCc--CCCcCcCCcCCcCcCCCCCCCC--EeECCCCC--E
Confidence            466776 556        9999999998876  9999999999  88898411 246852 234654  89999887  9


Q ss_pred             EEecCCCCC----CCCCCCCCCCCCCCCC-CCCceeeC
Q psy9686         716 TCLCLKGFE----GPHRELPVESVDEPPS-EDETSVDL  748 (769)
Q Consensus       716 ~C~C~~Gyt----G~~Ce~dideC~~npC-~~GtC~n~  748 (769)
                      +|.|++||+    |..|+ +   ..+.|| ..++|+..
T Consensus        76 ~C~C~~G~~~~~~g~~C~-~---~~~~pC~~~~~~i~~  109 (114)
T 1aut_L           76 RCSCAPGYKLGDDLLQCH-P---AVKFPCGRPWKRMEK  109 (114)
T ss_dssp             EEECCTTEEECTTSSCEE-E---CSSSCTTCCC-----
T ss_pred             EeECCCCeeECCCCCccC-c---CcccCCCCCCccCCC
Confidence            999999998    55664 2   234567 45566553

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.73  E-value=2.1e-09  Score=108.09  Aligned_cols=78  Identities=26%  Similarity=0.678  Sum_probs=29.2

Q ss_pred             ccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCC-ccccC-CCCCCCCCEEecCCCCCceEEe
Q psy9686         641 YCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENS-AACVT-LNPCQNNATCVASPGDKQITCL  718 (769)
Q Consensus       641 ~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~i-deC~s-~~pC~ngg~Cvnt~Gs~~y~C~  718 (769)
                      .|.  ++++|. .+||.++++|++..++  |+|.|++||+  |..|+. ++ ++|.. ..+|.+  +|+++.|+  |+|.
T Consensus        38 ~c~--dideC~-~~pC~ngg~C~n~~g~--y~C~C~~Gf~--G~~Ce~-~i~deC~~~~~~C~~--~C~n~~gs--y~C~  105 (195)
T 1nfu_B           38 KYK--DGDQCE-TSPCQNQGKCKDGLGE--YTCTCLEGFE--GKNCEL-FTRKLCSLDNGDCDQ--FCHEEQNS--VVCS  105 (195)
T ss_dssp             ---------------------------------------------------CCGGGTGGGGCSS--EEEEETTE--EEEE
T ss_pred             cCC--CCcccC-CCCCCCCCEeECCCCC--eeEeCCCCce--eccccc-cccccccCCCCCCCC--EeECCCCC--eEEE
Confidence            455  689998 8899999999999877  9999999999  899984 46 78963 246876  99999887  9999


Q ss_pred             cCCCCC----CCCCCC
Q psy9686         719 CLKGFE----GPHREL  730 (769)
Q Consensus       719 C~~Gyt----G~~Ce~  730 (769)
                      |++||+    |..|+.
T Consensus       106 C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B          106 CARGYTLADNGKACIP  121 (195)
T ss_dssp             CCTTEEECTTSSCEEE
T ss_pred             CCCCceeCCCCCcccc
Confidence            999999    999973

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.71  E-value=1.7e-08  Score=107.81  Aligned_cols=104  Identities=21%  Similarity=0.514  Sum_probs=75.3

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccC--CCCCCCCCEEecCCCCCceEEecCCCC
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVT--LNPCQNNATCVASPGDKQITCLCLKGF  723 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s--~~pC~ngg~Cvnt~Gs~~y~C~C~~Gy  723 (769)
                      ++|+|. .+||.++++|++..++  |+|.|++||+  |..|+. ++|+|..  .++|.+  .|+++.++  |+|.|++||
T Consensus         4 d~~~C~-~~pC~~~g~C~~~~~~--~~C~C~~g~~--g~~C~~-~~~eC~~~~~~~C~~--~C~~~~g~--~~C~C~~g~   73 (317)
T 3h5c_B            4 GGSPCI-SQPCLHNGSCQDSIWG--YTCTCSPGYE--GSNCEL-AKNECHPERTDGCQH--FCLPGQES--YTCSCAQGY   73 (317)
T ss_dssp             --CCTT-SCCCTTTCCCCCCSSS--CCCCCSSSCC--SSSSCC-CSSSCCTTCTTSCSS--EEECCSSS--CEEECCTTE
T ss_pred             cCCcCC-CCCCCCCCEeECCCCC--eEEECCCCCc--CCcccc-CcccCCCCCCCCCcC--ccccCCCe--eEEeccccc
Confidence            478897 8899999999998876  9999999999  999986 7899973  278987  89999887  999999999


Q ss_pred             CCC----CCCCCCCCCCCCCC-CCCceeeCCCCccccCCCCccceeee
Q psy9686         724 EGP----HRELPVESVDEPPS-EDETSVDLQLGSQANSYNWAHMLIVT  766 (769)
Q Consensus       724 tG~----~Ce~dideC~~npC-~~GtC~n~~ggy~C~~~~w~~~ll~~  766 (769)
                      .|.    .|. ++++|.-.-- ..|      ....=..+||+..|..+
T Consensus        74 ~~~~~~~~C~-~~~~c~cg~~~~~G------~~a~~~~~Pw~v~l~~~  114 (317)
T 3h5c_B           74 RLGEDHKQCV-PHDQCACGVLTSEK------RAPDLQDLPWQVKLTNS  114 (317)
T ss_dssp             ECCTTSSCCE-ECSSCCCCCCSCCC------SSCCTTCCTTEEEEECS
T ss_pred             cccccccccc-cccccccccccccc------ccCccCCCCcEEEEecc
Confidence            863    453 4555432100 011      11222345898887653

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.70  E-value=7.1e-09  Score=94.47  Aligned_cols=82  Identities=21%  Similarity=0.501  Sum_probs=38.3

Q ss_pred             cCCCCCCCcccccccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee-cCCCccccCCccccCCCCCCCCCEEecCC
Q psy9686         633 CTEDFTGEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV-SSEYCQFENSAACVTLNPCQNNATCVASP  710 (769)
Q Consensus       633 C~~Gy~G~~Ce~~~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg-~G~~C~~~~ideC~s~~pC~ngg~Cvnt~  710 (769)
                      ...+|.|..|+   +++|.. ...|.  ++|+++.++  |.|.|++||++ +|..|+  ++|+|...++|.  ++|+++.
T Consensus        18 ~~~~~~~~~Cd---~neC~~~~~~C~--~~C~n~~g~--y~C~C~~Gy~g~~g~~C~--dideC~~~~~C~--~~C~n~~   86 (107)
T 2w2n_E           18 TENLYFQGAMG---TNECLDNNGGCS--YVCNDLKIG--YECLCPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLE   86 (107)
T ss_dssp             --CCCCSCCBS---CCGGGTGGGGCS--SEEECCSBS--CEEECCTTCEEETTTEEE--C--------------------
T ss_pred             cCCCcCCCCCc---CccCcCCCCCCC--CEeEeCCCC--eEEECCCCccccCCCccc--cccccCCCCCcC--CeeecCC
Confidence            45688899995   789973 24575  589998877  99999999996 568998  899996457896  5899998


Q ss_pred             CCCceEEecCCCCCCCC
Q psy9686         711 GDKQITCLCLKGFEGPH  727 (769)
Q Consensus       711 Gs~~y~C~C~~GytG~~  727 (769)
                      ++  |+|.|++||.|..
T Consensus        87 gs--y~C~C~~Gy~~~~  101 (107)
T 2w2n_E           87 GG--YKCQCEEGFQLDP  101 (107)
T ss_dssp             -----------------
T ss_pred             CC--EEEECCCCceECC
Confidence            87  9999999998653

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.68  E-value=3.8e-09  Score=99.85  Aligned_cols=77  Identities=26%  Similarity=0.696  Sum_probs=28.4

Q ss_pred             ccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCC-ccccC-CCCCCCCCEEecCCCCCceEEe
Q psy9686         641 YCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENS-AACVT-LNPCQNNATCVASPGDKQITCL  718 (769)
Q Consensus       641 ~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~i-deC~s-~~pC~ngg~Cvnt~Gs~~y~C~  718 (769)
                      .|.  ++|+|. .++|.++++|++..++  |+|.|++||+  |..|+. .+ ++|.. ..+|.+  +|+++.++  |+|.
T Consensus        38 ~c~--d~d~C~-~~pC~n~g~C~~~~~~--y~C~C~~G~~--G~~C~~-~i~d~C~~~~~~C~~--~C~~~~g~--y~C~  105 (134)
T 2vh0_B           38 KYK--DGDQCE-TSPCQNQGKCKDGLGE--YTCTCLEGFE--GKNCEL-FTRKLCSLDNGDCDQ--FCHEEQNS--VVCS  105 (134)
T ss_dssp             ---------------------------------------------------CCGGGTGGGGCSS--EEEEETTE--EEEE
T ss_pred             cCC--CcCcCC-CCCCCCcCCcccCCCC--EEeeCCCCcc--CCcccc-CCCCccccCCCCCCC--EeECCCCC--EEEE
Confidence            465  688998 7899999999998876  9999999999  889984 36 78963 246876  89999876  9999


Q ss_pred             cCCCCC----CCCCC
Q psy9686         719 CLKGFE----GPHRE  729 (769)
Q Consensus       719 C~~Gyt----G~~Ce  729 (769)
                      |++||+    |.+|+
T Consensus       106 C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B          106 CARGYTLADNGKACI  120 (134)
T ss_dssp             CCTTEEECTTSSCEE
T ss_pred             CCCCcEECCCCCccC
Confidence            999999    99996

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.56  E-value=1.5e-08  Score=92.39  Aligned_cols=55  Identities=24%  Similarity=0.624  Sum_probs=21.7

Q ss_pred             ccccCCCCcccccCCCCCC---CccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCee
Q psy9686         621 PLKDGNLSFYCNCTEDFTG---EYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       621 ~C~n~~gsy~C~C~~Gy~G---~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      .|+++.++|.|.|++||.|   ..|+  ++|+|...++|.  ++|+++.++  |.|.|++||++
T Consensus        42 ~C~n~~g~y~C~C~~Gy~g~~g~~C~--dideC~~~~~C~--~~C~n~~gs--y~C~C~~Gy~~   99 (107)
T 2w2n_E           42 VCNDLKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLEGG--YKCQCEEGFQL   99 (107)
T ss_dssp             EEECCSBSCEEECCTTCEEETTTEEE--C-----------------------------------
T ss_pred             EeEeCCCCeEEECCCCccccCCCccc--cccccCCCCCcC--CeeecCCCC--EEEECCCCceE
Confidence            5888899999999999997   7898  799997447896  699999887  99999999984

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.52  E-value=4.4e-08  Score=104.66  Aligned_cols=68  Identities=22%  Similarity=0.438  Sum_probs=59.3

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCC---CCCCCCceeeCCCCccccCCC-Ccc
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDE---PPSEDETSVDLQLGSQANSYN-WAH  761 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~---npC~~GtC~n~~ggy~C~~~~-w~~  761 (769)
                      ++|+|. .+||.++++|++..++  |+|.|++||+|.+|+.++|||..   ++|.+ +|+|..++|+|...+ |.+
T Consensus         4 d~~~C~-~~pC~~~g~C~~~~~~--~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~   75 (317)
T 3h5c_B            4 GGSPCI-SQPCLHNGSCQDSIWG--YTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRL   75 (317)
T ss_dssp             --CCTT-SCCCTTTCCCCCCSSS--CCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEEC
T ss_pred             cCCcCC-CCCCCCCCEeECCCCC--eEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccc
Confidence            578896 8999999999998876  99999999999999989999997   78976 999999999998764 665

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.44  E-value=8.1e-08  Score=77.18  Aligned_cols=49  Identities=18%  Similarity=0.272  Sum_probs=37.7

Q ss_pred             CCCccccCCccccCCCCCCCCCEEecC---CCCCceEEecCCCCCCCCCCCCCC
Q psy9686         683 SEYCQFENSAACVTLNPCQNNATCVAS---PGDKQITCLCLKGFEGPHRELPVE  733 (769)
Q Consensus       683 G~~C~~~~ideC~s~~pC~ngg~Cvnt---~Gs~~y~C~C~~GytG~~Ce~did  733 (769)
                      |..|+. ++|+|. ++||+|+|+|...   .+.++|+|.|++||+|.+||..|.
T Consensus         1 G~~c~~-~~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~   52 (55)
T 3u7u_G            1 GTSHLV-KCAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM   52 (55)
T ss_dssp             --CCEE-ECCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred             CCCCcc-cCCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence            456776 789996 9999999999532   222349999999999999997665

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.44  E-value=2.9e-07  Score=109.02  Aligned_cols=103  Identities=17%  Similarity=0.402  Sum_probs=75.3

Q ss_pred             cccCCCccccCCC--CcccccCCCCCCCcccccccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee-cCCCccccC
Q psy9686         615 LQQNISPLKDGNL--SFYCNCTEDFTGEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV-SSEYCQFEN  690 (769)
Q Consensus       615 ~c~ngg~C~n~~g--sy~C~C~~Gy~G~~Ce~~~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg-~G~~C~~~~  690 (769)
                      .|.+ +.|++...  .+.+.|+.|..+..++. ++++|.. ...|.  +.|+++.++  |+|.|++||.+ +|..|+  +
T Consensus       262 ~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~eC~~~~~~C~--~~C~~~~~~--~~C~C~~G~~~~~~~~C~--d  333 (699)
T 1n7d_A          262 KCHS-GECITLDKVCNMARDCRDWSDEPIKEC-GTNECLDNNGGCS--HVCNDLKIG--YECLCPDGFQLVAQRRCE--D  333 (699)
T ss_dssp             CCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSC-CCCCTTSSTTTSC--TTCCCCTTC--CCCCCCSSSCCCSSSCCC--C
T ss_pred             ecCC-CcEeCCcccccccceecCccccccccc-ccccccccccCcC--CCcccCCCC--cEEeCCCCeEcCCCCccc--C
Confidence            3444 56765422  24667888877653332 3678863 23465  479998877  99999999986 578998  8


Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCCCCCC----CCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEG----PHRE  729 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG----~~Ce  729 (769)
                      +|+|....+|.+  .|+++.|+  |+|.|++||++    ..|.
T Consensus       334 ideC~~~~~C~~--~C~n~~g~--y~C~C~~G~~~~~~~~~C~  372 (699)
T 1n7d_A          334 IDECQDPDTCSQ--LCVNLEGG--YKCQCEEGFQLDPHTKACK  372 (699)
T ss_dssp             CCCCSSSSSCTT--TCCBCSSC--BCCCCCSSCBCCSSCCCCB
T ss_pred             ccccCCCCcccc--ccccCCCC--eeeeeecccccCCCCCccc
Confidence            999975678965  79999988  99999999974    4564

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.41  E-value=1.2e-07  Score=96.86  Aligned_cols=94  Identities=24%  Similarity=0.595  Sum_probs=72.5

Q ss_pred             ccCCCccccCCCCcccccCCCCCCCcccccccc---------cccc---CCCCCCCCeEeeCCCCCceEeecCCC-----
Q psy9686         616 QQNISPLKDGNLSFYCNCTEDFTGEYCQFENSA---------ACVT---LNPCQNNATCVASPGDKQITCLCLKG-----  678 (769)
Q Consensus       616 c~ngg~C~n~~gsy~C~C~~Gy~G~~Ce~~~id---------eC~~---~~pC~n~gtCvnt~Gs~~y~C~C~~G-----  678 (769)
                      |.++|+|+.    ..|.|.+||.|..|+.. .+         .|..   ..+|.++|+|+.      ..|.|.+|     
T Consensus        98 Csg~G~C~~----g~C~C~~G~~G~~Cec~-~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~------g~C~C~~gw~~~~  166 (217)
T 2p28_B           98 CHGKGFLEC----GICRCDTGYIGKNCECQ-TQGRSSQELEGSCRKDNNSIICSGLGDCVC------GQCLCHTSDVPGK  166 (217)
T ss_dssp             TTTSEEEET----TEEEECTTEESTTSCEE-CCCCC-GGGGGGGBSSTTSCBGGGTEEEET------TEEEECCCCSTTC
T ss_pred             cCCCceEEC----CEEECCCCccCCccccc-CcccccccCCCcCCCCCCCCCCCCCCEEeC------CceECCCCCCCcc
Confidence            456677774    38999999999999853 22         4642   357999999984      26999999     


Q ss_pred             -CeecCCCccccCCccccCCC---CCCCC--CEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         679 -GTVSSEYCQFENSAACVTLN---PCQNN--ATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       679 -ftg~G~~C~~~~ideC~s~~---pC~ng--g~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                       |+  |..|+. +.+.|. .+   +|.++  |+|..      .+|.|.+||+|..|+.
T Consensus       167 ~~~--G~~Ce~-~~~~C~-~~~g~~C~~~~~G~C~~------g~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          167 LIY--GQYCEC-DTINCE-RYNGQVCGGPGRGLCFC------GKCRCHPGFEGSACQH  214 (217)
T ss_dssp             CEE--STTSCE-ESSCSC-EETTEETTCTTTEEEET------TEEEECTTEESTTSCE
T ss_pred             cEE--CCCccc-CCccCC-CCCCCCCCCCCCcEEeC------CeeECCCCCccCCcCC
Confidence             56  899985 456785 33   69887  99995      2899999999999974

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.35  E-value=4.1e-07  Score=109.26  Aligned_cols=109  Identities=18%  Similarity=0.414  Sum_probs=76.8

Q ss_pred             cccCCCccccCCC--CcccccCCCCCCCcccccccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee-cCCCccccC
Q psy9686         615 LQQNISPLKDGNL--SFYCNCTEDFTGEYCQFENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV-SSEYCQFEN  690 (769)
Q Consensus       615 ~c~ngg~C~n~~g--sy~C~C~~Gy~G~~Ce~~~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg-~G~~C~~~~  690 (769)
                      .|.+ +.|++...  ...+.|..|+.+..++. .+++|.. ...|.  +.|+++.++  |.|.|++||.+ +|..|+  +
T Consensus       280 ~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~~C~~~~~~C~--~~C~~~~~~--y~C~C~~Gy~l~~g~~C~--d  351 (791)
T 3m0c_C          280 KCHS-GECITLDKVCNMARDCRDWSDEPIKEC-GTNECLDNNGGCS--HVCNDLKIG--YECLCPDGFQLVAQRRCE--D  351 (791)
T ss_dssp             CCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTB-SCCSTTTGGGGCS--SEEEECSBS--EEEECCTTCEEETTTEEE--C
T ss_pred             ccCC-CcccccccccCCccccccccCcccccc-ccccccccccCcc--ccccCCCCC--cccCCCCCCccCCCCccc--c
Confidence            4554 56775433  24567888886643222 2567752 22354  489999877  99999999976 688998  8


Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCCCCC----CCCCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFE----GPHRELPVESVD  736 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt----G~~Ce~dideC~  736 (769)
                      +|+|..+.+|.+  .|+++.|+  |+|.|++||.    |..|. +++++.
T Consensus       352 ideC~~~~~C~~--~C~n~~gs--y~C~C~~Gy~l~~~~~~C~-~~~~~p  396 (791)
T 3m0c_C          352 IDECQDPDTCSQ--LCVNLEGG--YKCQCEEGFQLDPHTKACK-AVGSIA  396 (791)
T ss_dssp             CCCCSSSSSCTT--TCCBCSSC--BCCCCCSSEECCSSCCCCE-ETTSCC
T ss_pred             CcccCCCCCCCC--eeecCCCC--ceeecCCCCEeCCCCceee-eccccc
Confidence            999974567754  79999988  9999999996    45674 455443

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.34  E-value=6.1e-07  Score=87.50  Aligned_cols=32  Identities=28%  Similarity=0.716  Sum_probs=25.8

Q ss_pred             CCCCCcEEeeCCCCccceEe-eCCCCCcCCCCcc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTC-TCPSGGQGQSGLE  554 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C-~C~~GftG~~Ced  554 (769)
                      ||.++++|....++ ..++| .|++||+|..|+.
T Consensus         2 ~C~~~g~C~~~~~~-g~~~C~~C~~g~~G~~Ce~   34 (162)
T 1klo_A            2 PCPGGSSCAIVPKT-KEVVCTHCPTGTAGKRCEL   34 (162)
T ss_dssp             CSCTTCCEEECSSS-CCEEECSCCTTEESTTSCE
T ss_pred             cCcCcCcccccCCC-CCEEeCCCCCCCcCCCCcC
Confidence            79999999986531 24899 7999999999953

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.33  E-value=3.9e-07  Score=67.55  Aligned_cols=37  Identities=30%  Similarity=0.715  Sum_probs=34.2

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      ++++|.++||.++|+|++..++   |.|.|++||+|..|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~---~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINS---YECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTE---EEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCc---eEeECCCCCcCCccC
Confidence            6789999999999999998876   999999999999984

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.31  E-value=2.3e-06  Score=101.41  Aligned_cols=132  Identities=17%  Similarity=0.335  Sum_probs=93.5

Q ss_pred             cccCCCccccCCCCcccc----cCCCCCCCccccccccccc--cCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccc
Q psy9686         615 LQQNISPLKDGNLSFYCN----CTEDFTGEYCQFENSAACV--TLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQF  688 (769)
Q Consensus       615 ~c~ngg~C~n~~gsy~C~----C~~Gy~G~~Ce~~~ideC~--~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~  688 (769)
                      .|. .+.|++  .++.|.    |..|..+..|.  .++.|.  ....|.+ ++|++....-.+.+.|+.|.......|  
T Consensus       221 ~C~-~g~Ci~--~~~~Cdg~~dC~dgsde~~C~--~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C--  292 (699)
T 1n7d_A          221 QCS-DGNCIH--GSRQCDREYDCKDMSDEVGCV--NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKEC--  292 (699)
T ss_dssp             ESS-SSCEEE--TTCCSSSCCCSSSSCSSSSTT--CCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSC--
T ss_pred             ecC-CCceee--eecccCCCCCCCCCCccCCCC--CCCcccCCCceecCC-CcEeCCcccccccceecCccccccccc--
Confidence            344 356776  456776    88888888887  356673  1346876 688765432124567888876333344  


Q ss_pred             cCCccccC-CCCCCCCCEEecCCCCCceEEecCCCCC---CCCCCCCCCCCCC-CCCCCCceeeCCCCccccCCC-Ccc
Q psy9686         689 ENSAACVT-LNPCQNNATCVASPGDKQITCLCLKGFE---GPHRELPVESVDE-PPSEDETSVDLQLGSQANSYN-WAH  761 (769)
Q Consensus       689 ~~ideC~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt---G~~Ce~dideC~~-npC~~GtC~n~~ggy~C~~~~-w~~  761 (769)
                       ++++|.. ...|.+  .|+++.++  |+|.|++||+   |..|+ +||||.. .+|. .+|+|+.|+|+|...+ |++
T Consensus       293 -~~~eC~~~~~~C~~--~C~~~~~~--~~C~C~~G~~~~~~~~C~-dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          293 -GTNECLDNNGGCSH--VCNDLKIG--YECLCPDGFQLVAQRRCE-DIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             -CCCCTTSSTTTSCT--TCCCCTTC--CCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred             -ccccccccccCcCC--CcccCCCC--cEEeCCCCeEcCCCCccc-CccccCCCCccc-cccccCCCCeeeeeeccccc
Confidence             4678862 234753  79999887  9999999998   88997 9999984 6775 5899999999998774 664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.30  E-value=3.8e-07  Score=100.72  Aligned_cols=68  Identities=19%  Similarity=0.387  Sum_probs=56.1

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCc---CCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCcCCC
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQ---GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSG  592 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~Gft---G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~  592 (769)
                      |||..+||.++++|++++++   |.|.|++||.   |..|+++|||..                   +.+|.        
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~---y~C~C~~G~~~~~~~~C~dideC~~-------------------~~~C~--------   50 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIG---YECLCPDGFQLVAQRRCEDIDECQD-------------------PDTCS--------   50 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSS---EEEECCTTEEECSSSCEEECCCCST-------------------TSSCS--------
T ss_pred             CcccCCCCCCCCEeECCCCC---eEEECCCCCCcCCCCcccCchhhhc-------------------cCCCC--------
Confidence            58988888888899999988   9999999998   788999888832                   34442        


Q ss_pred             cccccccccccccccceeeccccccCCCccccCCCCcccccCCCCCCC
Q psy9686         593 LEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFTGE  640 (769)
Q Consensus       593 ~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~G~  640 (769)
                                                 ..|+++.++|.|.|.+||.+.
T Consensus        51 ---------------------------~~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L           51 ---------------------------QLCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             ---------------------------SCCBCCSSSCBCCCCTTCCCC
T ss_pred             ---------------------------CccCCCccceeeecccccccc
Confidence                                       147888999999999999754

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.28  E-value=3.9e-07  Score=73.20  Aligned_cols=39  Identities=21%  Similarity=0.441  Sum_probs=32.7

Q ss_pred             cccCCCCCCCCCCCcEEe-----eCCCCccceEeeCCCCCcCCCCcc
Q psy9686         513 AALGGCAGRPCRNNGTCT-----PVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       513 ~dideC~s~PC~ngGtCv-----n~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      +++|||.++||.|+|+|.     +..++   |+|.|++||+|.+|+.
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~---y~C~C~~g~~G~~CE~   49 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSR---YLCKCPNEFTGDRCQN   49 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCC---EEEEECTTEESTTSCE
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCC---EeEeCCCCCcCCCcCc
Confidence            468999999999999995     44444   9999999999999964

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.25  E-value=5.9e-07  Score=99.18  Aligned_cols=70  Identities=24%  Similarity=0.568  Sum_probs=58.6

Q ss_pred             cccccCCCCCCCCeEeeCCCCCceEeecCCCCee-cCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         648 AACVTLNPCQNNATCVASPGDKQITCLCLKGGTV-SSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       648 deC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg-~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                      |+|. ..+|..+++|++++++  |.|.|++||.+ +|..|+  ++|+|..+.+|.+  .|+++.|+  |+|.|.+||.+.
T Consensus         1 ~eC~-~~~~~c~~~C~~~~~~--y~C~C~~G~~~~~~~~C~--dideC~~~~~C~~--~C~n~~g~--~~C~C~~g~~~~   71 (400)
T 3p5b_L            1 NECL-DNNGGCSHVCNDLKIG--YECLCPDGFQLVAQRRCE--DIDECQDPDTCSQ--LCVNLEGG--YKCQCEEGFQLD   71 (400)
T ss_dssp             CCTT-TTGGGCSSEEEECSSS--EEEECCTTEEECSSSCEE--ECCCCSTTSSCSS--CCBCCSSS--CBCCCCTTCCCC
T ss_pred             Cccc-CCCCCCCCEeECCCCC--eEEECCCCCCcCCCCccc--CchhhhccCCCCC--ccCCCccc--eeeecccccccc
Confidence            4676 5566666799999887  99999999986 578997  8999975678976  89999987  999999999754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.20  E-value=2.2e-07  Score=102.01  Aligned_cols=73  Identities=16%  Similarity=0.404  Sum_probs=16.5

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccchhccccCceeeeeeeecccCCCCCCCCCCCc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQG  589 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C  589 (769)
                      ++|||..+||....+|.+..++   |.|.|++||+    |..|++++||..                   ..+|.+    
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~---~~C~C~~G~~l~~~~~~C~d~~eC~~-------------------~~~C~~----   55 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGA---VQCTCHTGYRLTEDGRTCQDVNECAE-------------------EGYCSQ----   55 (386)
T ss_dssp             ------------------------------------------------------------------------CCTT----
T ss_pred             CcCcccCCCCCCCCCCcCCCCC---cEeECCCCceECCCCCccCccceeCC-------------------cCcccC----
Confidence            6789988886666699888877   9999999998    888999998831                   345521    


Q ss_pred             CCCcccccccccccccccceeeccccccCCCccccCCCCcccccCCCCC----CCccc
Q psy9686         590 QSGLEITPVYLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTEDFT----GEYCQ  643 (769)
Q Consensus       590 ~~~~~C~~gy~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~Gy~----G~~Ce  643 (769)
                                                     .|+++.++|.|.|.+||.    |..|+
T Consensus        56 -------------------------------~C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           56 -------------------------------GCTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             -------------------------------EEC-----CCEECCTTEEECTTSSCEE
T ss_pred             -------------------------------cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence                                           278889999999999997    77787

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.20  E-value=1.1e-06  Score=105.38  Aligned_cols=118  Identities=17%  Similarity=0.386  Sum_probs=71.2

Q ss_pred             ccCCCCCCCcccccccccccc--CCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccC-CCCCCCCCEEec
Q psy9686         632 NCTEDFTGEYCQFENSAACVT--LNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVT-LNPCQNNATCVA  708 (769)
Q Consensus       632 ~C~~Gy~G~~Ce~~~ideC~~--~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s-~~pC~ngg~Cvn  708 (769)
                      .|..|..+..|.  .+++|..  ..+|.+ +.|++....-...+.|..|+...+..|.   +++|.. ...|.+  .|++
T Consensus       257 dC~dgsDE~~C~--~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~---~~~C~~~~~~C~~--~C~~  328 (791)
T 3m0c_C          257 DCKDMSDEVGCV--NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECG---TNECLDNNGGCSH--VCND  328 (791)
T ss_dssp             ------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBS---CCSTTTGGGGCSS--EEEE
T ss_pred             ccccccccCccc--ccccccCCCccccCC-CcccccccccCCccccccccCccccccc---cccccccccCccc--cccC
Confidence            477787777787  4556641  346876 6888764321235688888763333453   466742 123543  8999


Q ss_pred             CCCCCceEEecCCCCC---CCCCCCCCCCCCC-CCCCCCceeeCCCCccccCCC-Ccc
Q psy9686         709 SPGDKQITCLCLKGFE---GPHRELPVESVDE-PPSEDETSVDLQLGSQANSYN-WAH  761 (769)
Q Consensus       709 t~Gs~~y~C~C~~Gyt---G~~Ce~dideC~~-npC~~GtC~n~~ggy~C~~~~-w~~  761 (769)
                      +.++  |+|.|++||.   |..|+ +||||.. .+|. ++|+|+.|+|+|...+ |..
T Consensus       329 ~~~~--y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          329 LKIG--YECLCPDGFQLVAQRRCE-DIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             CSBS--EEEECCTTCEEETTTEEE-CCCCCSSSSSCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred             CCCC--cccCCCCCCccCCCCccc-cCcccCCCCCCC-CeeecCCCCceeecCCCCEe
Confidence            9887  9999999995   89996 9999984 4554 5899999999998774 653

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.18  E-value=3.1e-07  Score=103.86  Aligned_cols=79  Identities=28%  Similarity=0.726  Sum_probs=40.4

Q ss_pred             cccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEec
Q psy9686         629 FYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVA  708 (769)
Q Consensus       629 y~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvn  708 (769)
                      ..+.|..+|.|..|+   +++|.  .+|.+ ++|++.     ++|.|.+||+  |..|+   ++.|.  .+|.++|+|++
T Consensus       377 ~p~~C~~~~~g~~c~---~~~C~--~~C~n-G~C~~~-----~~C~C~~G~~--G~~C~---~~~C~--~~C~~~g~C~~  438 (463)
T 2wg3_C          377 MPEECRATVQPAQTL---TSECS--RLCRN-GYCTPT-----GKCCCSPGWE--GDFCR---TAKCE--PACRHGGVCVR  438 (463)
T ss_dssp             SCGGGCCCCCCCCCC---CCHHH--HHCCS-EEECTT-----SCEEECTTEE--STTSC---EECC--------------
T ss_pred             ccccCCCCCcCCCCc---ccccc--CCCCC-CccCCC-----CeECCCCCcC--CCcCC---cCcCC--CCCCCCCEECC
Confidence            356788999999997   56896  36987 799864     4799999999  89997   35795  39999999997


Q ss_pred             CCCCCceEEecCCCCCCCCCCC
Q psy9686         709 SPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       709 t~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .     ++|.|++||+|.+|+.
T Consensus       439 ~-----~~C~C~~G~~G~~C~~  455 (463)
T 2wg3_C          439 P-----NKCLCKKGYLGPQCEQ  455 (463)
T ss_dssp             ----------------------
T ss_pred             C-----CEEECCCCcccCCCCC
Confidence            5     6999999999999974

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.14  E-value=3.7e-07  Score=74.88  Aligned_cols=44  Identities=25%  Similarity=0.681  Sum_probs=39.0

Q ss_pred             cccCCCCCCCCCCC--cEEeeCCCCccceEeeCCCCCc-CCCCcccccch
Q psy9686         513 AALGGCAGRPCRNN--GTCTPVSGGVVNFTCTCPSGGQ-GQSGLEITPVY  559 (769)
Q Consensus       513 ~dideC~s~PC~ng--GtCvn~~gs~~~y~C~C~~Gft-G~~CedideC~  559 (769)
                      .++|+|.++||.++  |+|++..++   |.|.|++||+ |.+|++.++|.
T Consensus         9 ~~~d~C~snPC~nga~gtC~~~~g~---y~C~C~~Gy~~G~~C~~~~~C~   55 (61)
T 2k2s_B            9 ETPAACSSNPCGPEAAGTCKETNSG---YICRCNQGYRISLDGTGNVTCI   55 (61)
T ss_dssp             TSCCHHHHCSSCSSSCCEEEECSSE---EEEECCTTEEEEECSSSCEEEE
T ss_pred             CCCCcCcCCCCcCCCccccccCCCc---eEeECCCCCccCCCCCCCCEec
Confidence            45789999999999  899999886   9999999999 99998777774

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.12  E-value=1.5e-06  Score=88.73  Aligned_cols=109  Identities=21%  Similarity=0.439  Sum_probs=72.7

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc-cccchhccccCceeeeeeeecccCCCCCCCCCCCcCCCcccccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE-ITPVYLWLMKLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPV  598 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced-ideC~~~~~~~~~~~~~~~~~~~Cs~~pC~~~g~C~~~~~C~~g  598 (769)
                      +..|.++|+|+.       ..|.|++||+|..|+- .++.                     ..++ ....|..       
T Consensus        95 ~~~Csg~G~C~~-------g~C~C~~G~~G~~Cec~~~~~---------------------~~~~-~~~~C~~-------  138 (217)
T 2p28_B           95 RSLCHGKGFLEC-------GICRCDTGYIGKNCECQTQGR---------------------SSQE-LEGSCRK-------  138 (217)
T ss_dssp             -CTTTTSEEEET-------TEEEECTTEESTTSCEECCCC---------------------C-GG-GGGGGBS-------
T ss_pred             CCccCCCceEEC-------CEEECCCCccCCcccccCccc---------------------cccc-CCCcCCC-------
Confidence            446999999985       3799999999999951 1110                     0000 0001100       


Q ss_pred             cccccccccceeeccccccCCCccccCCCCcccccCCC------CCCCcccccccccccc--CCCCCCC--CeEeeCCCC
Q psy9686         599 YLWLMKMKTLVMVQYYLQQNISPLKDGNLSFYCNCTED------FTGEYCQFENSAACVT--LNPCQNN--ATCVASPGD  668 (769)
Q Consensus       599 y~~~~~~~~C~~~~~~~c~ngg~C~n~~gsy~C~C~~G------y~G~~Ce~~~ideC~~--~~pC~n~--gtCvnt~Gs  668 (769)
                                 ......|.++|+|++.    .|.|.+|      |+|..|+.+ ++.|..  ..+|.++  |+|..  + 
T Consensus       139 -----------~~~~~~Csg~G~C~~g----~C~C~~gw~~~~~~~G~~Ce~~-~~~C~~~~g~~C~~~~~G~C~~--g-  199 (217)
T 2p28_B          139 -----------DNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECD-TINCERYNGQVCGGPGRGLCFC--G-  199 (217)
T ss_dssp             -----------STTSCBGGGTEEEETT----EEEECCCCSTTCCEESTTSCEE-SSCSCEETTEETTCTTTEEEET--T-
T ss_pred             -----------CCCCCCCCCCCEEeCC----ceECCCCCCCcccEECCCcccC-CccCCCCCCCCCCCCCCcEEeC--C-
Confidence                       0012346777888853    7999999      699999864 567862  1269887  99985  2 


Q ss_pred             CceEeecCCCCeecCCCccc
Q psy9686         669 KQITCLCLKGGTVSSEYCQF  688 (769)
Q Consensus       669 ~~y~C~C~~Gftg~G~~C~~  688 (769)
                         .|.|.+||+  |..|+.
T Consensus       200 ---~C~C~~G~~--G~~C~~  214 (217)
T 2p28_B          200 ---KCRCHPGFE--GSACQH  214 (217)
T ss_dssp             ---EEEECTTEE--STTSCE
T ss_pred             ---eeECCCCCc--cCCcCC
Confidence               799999999  888874

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.12  E-value=3.5e-07  Score=100.32  Aligned_cols=75  Identities=24%  Similarity=0.573  Sum_probs=19.5

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCe--ecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCC
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGT--VSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGF  723 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gft--g~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~Gy  723 (769)
                      ++|+|. .+++...++|.+..|+  |+|.|++||+  .+|..|+  ++|+|....+|.+  .|+++.|+  |+|.|++||
T Consensus         2 ~~~~C~-~~~~~c~~~C~~~~g~--~~C~C~~G~~l~~~~~~C~--d~~eC~~~~~C~~--~C~~~~g~--~~C~C~~g~   72 (386)
T 3v65_B            2 GEENCN-VNNGGCAQKCQMIRGA--VQCTCHTGYRLTEDGRTCQ--DVNECAEEGYCSQ--GCTNSEGA--FQCWCEAGY   72 (386)
T ss_dssp             -------------------------------------------------------CCTT--EEC-------CCEECCTTE
T ss_pred             CcCccc-CCCCCCCCCCcCCCCC--cEeECCCCceECCCCCccC--ccceeCCcCcccC--cCCCCCCC--CeEEECCCc
Confidence            478897 4443333489888776  9999999998  3688996  8999964678987  49999987  999999999


Q ss_pred             C----CCCCC
Q psy9686         724 E----GPHRE  729 (769)
Q Consensus       724 t----G~~Ce  729 (769)
                      .    |..|+
T Consensus        73 ~l~~d~~~C~   82 (386)
T 3v65_B           73 ELRPDRRSCK   82 (386)
T ss_dssp             EECTTSSCEE
T ss_pred             eEcCCCCeEC
Confidence            7    78886

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.11  E-value=2.1e-06  Score=63.54  Aligned_cols=37  Identities=35%  Similarity=0.785  Sum_probs=33.6

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      ++|+|. .+||.++|+|++..++  |+|.|++||+|.+|+
T Consensus         2 d~d~C~-~~pC~ngg~C~~~~~~--~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            2 DGDQCE-SNPCLNGGSCKDDINS--YECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTT-TCCCCTTCEEEEETTE--EEEECCTTCCSTTSC
T ss_pred             ccccCC-CCCCCCCCEeEcCCCc--eEeECCCCCcCCccC
Confidence            578896 8999999999998776  999999999999997

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.99  E-value=6.7e-06  Score=65.24  Aligned_cols=43  Identities=23%  Similarity=0.482  Sum_probs=35.0

Q ss_pred             CCccccCCC---CCCCCCEEe--cCCCCCceEEecCCCCCCCCCCCCCCCC
Q psy9686         690 NSAACVTLN---PCQNNATCV--ASPGDKQITCLCLKGFEGPHRELPVESV  735 (769)
Q Consensus       690 ~ideC~s~~---pC~ngg~Cv--nt~Gs~~y~C~C~~GytG~~Ce~dideC  735 (769)
                      ++++|. ++   ||.|+|+|+  +..++  |+|.|++||+|.+|+.++.++
T Consensus         2 ~i~~C~-~~~~~pC~ngg~C~~~~~~~~--~~C~C~~G~~G~~Ce~~~~~~   49 (53)
T 1egf_A            2 SYPGCP-SSYDGYCLNGGVCMHIESLDS--YTCNCVIGYSGDRCQTRDLRW   49 (53)
T ss_dssp             EECCCC-TTSSCSSCSSCEEEEESSSSC--EEEECCTTCCSSSSCCCSCCC
T ss_pred             CcccCC-CCCCCcCCCCcEEEeeCCCCC--EEEECCCCCcCCcCCccCccc
Confidence            467886 44   999999999  66655  999999999999998766543

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.99  E-value=5.4e-06  Score=65.80  Aligned_cols=38  Identities=29%  Similarity=0.674  Sum_probs=33.3

Q ss_pred             ccCCCCCC---CCCCCcEEe--eCCCCccceEeeCCCCCcCCCCcc
Q psy9686         514 ALGGCAGR---PCRNNGTCT--PVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       514 dideC~s~---PC~ngGtCv--n~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++++|.++   ||.|+|+|+  +..++   |.|.|++||+|.+|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~---~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDS---YTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSC---EEEECCTTCCSSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCC---EEEECCCCCcCCcCCc
Confidence            57899886   999999999  66666   9999999999999954

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.94  E-value=4.8e-06  Score=63.79  Aligned_cols=39  Identities=21%  Similarity=0.360  Sum_probs=31.5

Q ss_pred             cccCCC---CCCCCCEEe--cCCCCCceEEecCCCCCCCCCCCCCCC
Q psy9686         693 ACVTLN---PCQNNATCV--ASPGDKQITCLCLKGFEGPHRELPVES  734 (769)
Q Consensus       693 eC~s~~---pC~ngg~Cv--nt~Gs~~y~C~C~~GytG~~Ce~dide  734 (769)
                      +|. ++   ||.|+|+|+  +..++  |+|.|++||+|.+|+.++++
T Consensus         2 ~C~-~~~~~pC~ngg~C~~~~~~~~--~~C~C~~G~~G~~Ce~~~~e   45 (45)
T 1a3p_A            2 GXP-SSYDGYCLNGGVXMHIESLDS--YTCNCVIGYSGDRCQTRDLR   45 (45)
T ss_dssp             CCT-TCCSSCCSSSCEEEECTTTSS--EEEECCTTEETTTTCEECCC
T ss_pred             Ccc-cCCCCCCCCCCEEEeecCCCC--EEEEcCCCCcCCcCCcccCC
Confidence            464 45   999999998  45444  99999999999999877654

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.90  E-value=3.4e-06  Score=69.24  Aligned_cols=44  Identities=25%  Similarity=0.424  Sum_probs=37.0

Q ss_pred             ccccCCCCCCCCCEEec-----CCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVA-----SPGDKQITCLCLKGFEGPHRELPVESVDEP  738 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvn-----t~Gs~~y~C~C~~GytG~~Ce~dideC~~n  738 (769)
                      ++|. .+||.|+|+|++     ..++  |+|.|++||+|.+|+.++++|...
T Consensus         7 ~~C~-~~pC~ngG~C~~~~~~~~~~~--y~C~C~~Gf~G~~Ce~~i~~~~~~   55 (63)
T 1hae_A            7 AEKE-KTFCVNGGECFMVKDLSNPSR--YLCKCQPGFTGARCTENVPMKVQN   55 (63)
T ss_dssp             CHHH-HTTSCTTCEEEEEESSSSSCC--EEEECCTTEESTTSCEECCSSCTT
T ss_pred             CCCC-CCcCCCCcEEecCCccCCCCC--EEEECCCCCcCCccCcCcCccccc
Confidence            4675 789999999996     3444  999999999999999889887654

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.85  E-value=4.5e-06  Score=68.56  Aligned_cols=42  Identities=19%  Similarity=0.361  Sum_probs=35.0

Q ss_pred             cCCCCCCCCCCCcEEee-----CCCCccceEeeCCCCCcCCCCc-ccccch
Q psy9686         515 LGGCAGRPCRNNGTCTP-----VSGGVVNFTCTCPSGGQGQSGL-EITPVY  559 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn-----~~gs~~~y~C~C~~GftG~~Ce-dideC~  559 (769)
                      .++|.++||.|+|+|++     ..++   |+|.|++||+|.+|+ ++++|.
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~---y~C~C~~Gf~G~~Ce~~i~~~~   53 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSR---YLCKCQPGFTGARCTENVPMKV   53 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCC---EEEECCTTEESTTSCEECCSSC
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCC---EEEECCCCCcCCccCcCcCccc
Confidence            46788999999999997     4444   999999999999995 567663

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.79  E-value=1.1e-05  Score=62.38  Aligned_cols=39  Identities=21%  Similarity=0.489  Sum_probs=31.9

Q ss_pred             ccCCCCC---CCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         514 ALGGCAG---RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       514 dideC~s---~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++++|.+   +||.| |+|++..+ ...|.|.|++||+|.+|+.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~-~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVD-MSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETT-TTEEEEEECTTCSSTTSCC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCC-CCCEEEECCCCCccCCCCc
Confidence            4688987   99999 89997542 1249999999999999964

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.78  E-value=1.5e-05  Score=60.96  Aligned_cols=35  Identities=26%  Similarity=0.514  Sum_probs=29.7

Q ss_pred             CCCCC---CCCCCcEEe--eCCCCccceEeeCCCCCcCCCCcc
Q psy9686         517 GCAGR---PCRNNGTCT--PVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       517 eC~s~---PC~ngGtCv--n~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      +|.++   ||.|+|+|+  +..++   |+|.|++||+|.+|+.
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~---~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDS---YTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSS---EEEECCTTEETTTTCE
T ss_pred             CcccCCCCCCCCCCEEEeecCCCC---EEEEcCCCCcCCcCCc
Confidence            67777   999999998  55555   9999999999999953

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.72  E-value=2e-05  Score=60.88  Aligned_cols=39  Identities=23%  Similarity=0.455  Sum_probs=31.5

Q ss_pred             CCccccCC---CCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         690 NSAACVTL---NPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       690 ~ideC~s~---~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ++++|. +   +||.| |+|++..+.++|.|.|++||+|.+||.
T Consensus         2 ~i~~C~-~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A            2 SITKCS-SDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             CEECCC-TTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             ccccCC-CCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            456785 4   89999 799976543459999999999999984

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.72  E-value=5.3e-06  Score=67.99  Aligned_cols=43  Identities=26%  Similarity=0.539  Sum_probs=36.3

Q ss_pred             CCccccCCCCCCCC--CEEecCCCCCceEEecCCCCC-CCCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNN--ATCVASPGDKQITCLCLKGFE-GPHRELPVESVD  736 (769)
Q Consensus       690 ~ideC~s~~pC~ng--g~Cvnt~Gs~~y~C~C~~Gyt-G~~Ce~dideC~  736 (769)
                      ++|+|. ++||.|+  |+|+++.++  |+|.|++||+ |.+|+ +.++|.
T Consensus        10 ~~d~C~-snPC~nga~gtC~~~~g~--y~C~C~~Gy~~G~~C~-~~~~C~   55 (61)
T 2k2s_B           10 TPAACS-SNPCGPEAAGTCKETNSG--YICRCNQGYRISLDGT-GNVTCI   55 (61)
T ss_dssp             SCCHHH-HCSSCSSSCCEEEECSSE--EEEECCTTEEEEECSS-SCEEEE
T ss_pred             CCCcCc-CCCCcCCCccccccCCCc--eEeECCCCCccCCCCC-CCCEec
Confidence            678996 8999999  899999876  9999999999 99997 344443

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.58  E-value=6.3e-06  Score=65.19  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=34.6

Q ss_pred             eEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCC--CCCceEEecCCCCCCCCCCC
Q psy9686         671 ITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASP--GDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       671 y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~--Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ++|.|++||+                .+||.|+|+|++..  +.+.|+|.|++||+|.+||.
T Consensus         3 ~~C~C~~g~~----------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A            3 PTYKCPETFD----------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             CCBCCCHHHH----------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             eeeECCCCCc----------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            4688999885                35788999999631  11349999999999999984

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.56  E-value=1e-05  Score=91.46  Aligned_cols=54  Identities=28%  Similarity=0.719  Sum_probs=19.7

Q ss_pred             CccccCCCCcccccCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccc
Q psy9686         620 SPLKDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQF  688 (769)
Q Consensus       620 g~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~  688 (769)
                      ++|++.   +.|.|.+||+|..|+   ++.|. . +|.++++|++.     ++|.|.+||+  |..|+.
T Consensus       402 G~C~~~---~~C~C~~G~~G~~C~---~~~C~-~-~C~~~g~C~~~-----~~C~C~~G~~--G~~C~~  455 (463)
T 2wg3_C          402 GYCTPT---GKCCCSPGWEGDFCR---TAKCE-P-ACRHGGVCVRP-----NKCLCKKGYL--GPQCEQ  455 (463)
T ss_dssp             EEECTT---SCEEECTTEESTTSC---EECC--------------------------------------
T ss_pred             CccCCC---CeECCCCCcCCCcCC---cCcCC-C-CCCCCCEECCC-----CEEECCCCcc--cCCCCC
Confidence            456543   489999999999997   56896 3 99999999865     6899999999  889984

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.52  E-value=2.8e-05  Score=89.06  Aligned_cols=57  Identities=23%  Similarity=0.483  Sum_probs=13.7

Q ss_pred             CcccccCCCCCCCcccc---------ccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcc
Q psy9686         628 SFYCNCTEDFTGEYCQF---------ENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       628 sy~C~C~~Gy~G~~Ce~---------~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~  687 (769)
                      ++.|.|++||.|..|+.         .+++.|. +.+|.+++.|...-....++|.|++||+  |..|+
T Consensus       459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~-~C~C~~~gs~~~~C~~~tG~C~C~~G~~--G~~Ce  524 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCR-PCDCDLGGALNNSCSEDSGQCSCLPHMI--GRQCN  524 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC----------------------------------------------------
T ss_pred             CCEEECCCCCcCCCcccCCCCccCCCCCCCCCc-CCCCCCCCccCCccCCCCCeeECCCCCc--CCCCC
Confidence            45799999999998862         1345676 6778887766543222125799999999  88886

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.40  E-value=4.4e-05  Score=84.82  Aligned_cols=108  Identities=21%  Similarity=0.354  Sum_probs=33.3

Q ss_pred             ccCC-CccccCCCCcccccCCCCCCCcccccccccccc---CCCCCCCCeEeeCCCCCceEee-cCCCCeecCCCccccC
Q psy9686         616 QQNI-SPLKDGNLSFYCNCTEDFTGEYCQFENSAACVT---LNPCQNNATCVASPGDKQITCL-CLKGGTVSSEYCQFEN  690 (769)
Q Consensus       616 c~ng-g~C~n~~gsy~C~C~~Gy~G~~Ce~~~ideC~~---~~pC~n~gtCvnt~Gs~~y~C~-C~~Gftg~G~~C~~~~  690 (769)
                      |..+ ..|....+++.|.|..++.|..|+     .|..   ..|+.+++.| .......+.|. |.-++.  |..|..  
T Consensus       299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE-----~C~pgy~~~P~~~gt~~-p~~~g~~~~C~pC~Cn~~--g~~CD~--  368 (426)
T 3zyj_B          299 CNLHATVCVYDNSKLTCECEHNTTGPDCG-----KCKKNYQGRPWSPGSYL-PIPKGAANACIPSISSIG--TNVCDN--  368 (426)
T ss_dssp             CSSSCSCEEEETTEEEECCCTTEESSSSC-----EECTTCCSSCCCCCBCC-SSSSCBCCCCCCCCC-------------
T ss_pred             CCCchhhcCCCCCCceeeCCCCCcCCCcc-----ccccccccCcccCCccc-ccCCCCCCcccCCCCCCC--cCcccc--
Confidence            4433 468776777999999999999998     3542   3456654322 11111124564 333333  666753  


Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCCCCC-CCCceeeCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDEPPS-EDETSVDLQL  750 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~npC-~~GtC~n~~g  750 (769)
                           ...+|.|+|+|.+..     +|.|++||+|..|+.       ..| ++|+|.+..|
T Consensus       369 -----~t~~C~ngg~C~~~~-----~C~C~~G~~G~~Ce~-------c~C~~~g~C~~~~G  412 (426)
T 3zyj_B          369 -----ELLHCQNGGTCHNNV-----RCLCPAAYTGILCEK-------LRCEEAGSCGSDSG  412 (426)
T ss_dssp             -------------------------------------------------------------
T ss_pred             -----CcccCCCCCCcCCCC-----CCcCCCCCcCCCCcC-------CCCCCCCcccCCCC
Confidence                 146899999998753     899999999999973       234 4678876554

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.29  E-value=0.00013  Score=81.10  Aligned_cols=56  Identities=29%  Similarity=0.609  Sum_probs=1.1

Q ss_pred             cCCCCCCCccccccccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCC
Q psy9686         633 CTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPG  711 (769)
Q Consensus       633 C~~Gy~G~~Ce~~~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~G  711 (769)
                      |.-++.|..|+..       ..+|.++++|.+..     +|.|++||+  |..|+.     |    +|.++|+|....|
T Consensus       357 C~Cn~~g~~CD~~-------t~~C~ngg~C~~~~-----~C~C~~G~~--G~~Ce~-----c----~C~~~g~C~~~~G  412 (426)
T 3zyj_B          357 SISSIGTNVCDNE-------LLHCQNGGTCHNNV-----RCLCPAAYT--GILCEK-----L----RCEEAGSCGSDSG  412 (426)
T ss_dssp             CCC----------------------------------------------------------------------------
T ss_pred             CCCCCCcCccccC-------cccCCCCCCcCCCC-----CCcCCCCCc--CCCCcC-----C----CCCCCCcccCCCC
Confidence            3334457777632       45788888998753     699999998  777762     3    4777888877655

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.23  E-value=9.6e-05  Score=70.90  Aligned_cols=41  Identities=24%  Similarity=0.569  Sum_probs=36.3

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccccch
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITPVY  559 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~CedideC~  559 (769)
                      ++|.++||.++|+|++..++   |.|.|++||+|..|+.+++|.
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~---~~c~C~~g~~G~~Ce~~~~c~  160 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGN---YTCSCYPGFYGPECEYVRDDD  160 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSS---EEEEECTTEESTTSCEECC--
T ss_pred             CCCcCCCCCCCCEEecCCCC---ceEeCCCCCcCcccccCcccC
Confidence            57888999999999998887   999999999999999988884

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.14  E-value=0.00012  Score=58.13  Aligned_cols=36  Identities=17%  Similarity=0.423  Sum_probs=28.4

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~di  732 (769)
                      .+||.|+|+|+...+.++|+|.|++||+|.+|+..+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~   46 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD   46 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence            578999999983223334999999999999998543

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.01  E-value=0.0002  Score=56.82  Aligned_cols=33  Identities=21%  Similarity=0.514  Sum_probs=27.7

Q ss_pred             CCCCCCCCcEEe--eCCCCccceEeeCCCCCcCCCCcc
Q psy9686         519 AGRPCRNNGTCT--PVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       519 ~s~PC~ngGtCv--n~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      .++||.|+|+|+  +..++   |.|.|++||+|.+|+.
T Consensus        10 ~~~pC~nGG~C~~~~~~~~---~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           10 HDGYCLHDGVCMYIEALDK---YACNCVVGYIGERCQY   44 (53)
T ss_dssp             TCCEECTTCEEEEETTTTE---EEEEECTTEESTTSCE
T ss_pred             CCCCCCCCeEEeeecCCCC---EEEecCCCCcCCCCCc
Confidence            367999999998  44444   9999999999999954

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.83  E-value=0.00032  Score=67.23  Aligned_cols=42  Identities=36%  Similarity=0.770  Sum_probs=33.7

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVESVDE  737 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dideC~~  737 (769)
                      ++|. .++|.++++|++..++  |+|.|++||+|.+|| .+++|..
T Consensus       120 ~~c~-~~~C~~~g~C~~~~~~--~~c~C~~g~~G~~Ce-~~~~c~~  161 (162)
T 1g1s_A          120 ASCQ-DMSCSKQGECLETIGN--YTCSCYPGFYGPECE-YVRDDDD  161 (162)
T ss_dssp             CCCC-TTGGGGSEEEEECSSS--EEEEECTTEESTTSC-EECC---
T ss_pred             CCCc-CCCCCCCCEEecCCCC--ceEeCCCCCcCcccc-cCcccCC
Confidence            3574 7889999999999876  999999999999997 5668864

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.52  E-value=0.0009  Score=52.67  Aligned_cols=35  Identities=26%  Similarity=0.456  Sum_probs=27.1

Q ss_pred             CCCCCCCcEEeeCCC-CccceEeeCCCCCcCCCCcc
Q psy9686         520 GRPCRNNGTCTPVSG-GVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       520 s~PC~ngGtCvn~~g-s~~~y~C~C~~GftG~~Ced  554 (769)
                      ++||.|+|+|++... ....|.|.|++||+|.+|+.
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            468999999997321 11249999999999999964

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.48  E-value=0.0023  Score=59.31  Aligned_cols=58  Identities=26%  Similarity=0.377  Sum_probs=41.9

Q ss_pred             CCCCCCEEecCCCCCce-EEecCCCCCCCCCCCCCC-CCCCCCC--CCCceeeCCCCccccC
Q psy9686         699 PCQNNATCVASPGDKQI-TCLCLKGFEGPHRELPVE-SVDEPPS--EDETSVDLQLGSQANS  756 (769)
Q Consensus       699 pC~ngg~Cvnt~Gs~~y-~C~C~~GytG~~Ce~did-eC~~npC--~~GtC~n~~ggy~C~~  756 (769)
                      ||.|+|+|++......| +|.|++||+|.+|+.+++ +|...-.  -.|++..+..|..|..
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g~G~~YrG~~~~t~sG~~Cq~   63 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLP   63 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCSSCTTCCSCCCBBTTSCBBCC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCcccccccceeeccccccCCcccC
Confidence            69999999987411125 999999999999997765 5654322  2566777777777764

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.43  E-value=0.00068  Score=54.79  Aligned_cols=35  Identities=26%  Similarity=0.493  Sum_probs=26.7

Q ss_pred             CCCCCcEEeeCC-CCccceEeeCCCCCcCCCCcccc
Q psy9686         522 PCRNNGTCTPVS-GGVVNFTCTCPSGGQGQSGLEIT  556 (769)
Q Consensus       522 PC~ngGtCvn~~-gs~~~y~C~C~~GftG~~Cedid  556 (769)
                      ||.|+|+|+... .....|.|.|++||+|.+|+..+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence            899999998421 01235999999999999996543

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.29  E-value=0.0014  Score=69.21  Aligned_cols=45  Identities=18%  Similarity=0.427  Sum_probs=36.6

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCeecCCCccccCCccc
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFENSAAC  694 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~~~~ideC  694 (769)
                      ++|+|.. .++|+.++.|+|+.|+  |.|.|.+||.|+|..|.  ++|+.
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gs--y~C~C~~Gy~GnG~~C~--d~d~P   49 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATG--FCCRCVANYTGNGRQCV--AEGSP   49 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSC--EEEEECTTEEECSSSEE--ETTCE
T ss_pred             cchhccCCCCCCCCCCEeEcCCCC--eEEEcCCCCCCCCCcCC--CCCCC
Confidence            5889973 5789999999999988  99999999999999998  55543

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.27  E-value=0.0015  Score=75.23  Aligned_cols=37  Identities=24%  Similarity=0.662  Sum_probs=33.5

Q ss_pred             cCCCCCCCCCCCcEEee-CCCCccceEeeCC-CCCcCCCCcc
Q psy9686         515 LGGCAGRPCRNNGTCTP-VSGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn-~~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      +|+|.++||+|+|+|++ ..++   |+|.|+ +||+|.+|+.
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~---y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDR---YQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTE---EEEECTTSSEETTTTCE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCc---eEeeCCCCCcCCCCCCC
Confidence            57899999999999999 6665   999999 9999999964

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.26  E-value=0.0011  Score=53.51  Aligned_cols=32  Identities=34%  Similarity=0.615  Sum_probs=25.9

Q ss_pred             CCCCCCEEecCC--CCCceEEecCCCCCCCCCCC
Q psy9686         699 PCQNNATCVASP--GDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       699 pC~ngg~Cvnt~--Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +|.|+|+|+...  +.+.|.|.|++||+|.+||.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            899999998431  22358999999999999984

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.21  E-value=0.0072  Score=53.85  Aligned_cols=75  Identities=24%  Similarity=0.490  Sum_probs=55.8

Q ss_pred             CCCCCCCCeEeeC-CCCCceEeecCCCCeecCCCccccCCccccCC-CCCCCCCEEecCCC---CCceEEecCCCCC---
Q psy9686         653 LNPCQNNATCVAS-PGDKQITCLCLKGGTVSSEYCQFENSAACVTL-NPCQNNATCVASPG---DKQITCLCLKGFE---  724 (769)
Q Consensus       653 ~~pC~n~gtCvnt-~Gs~~y~C~C~~Gftg~G~~C~~~~ideC~s~-~pC~ngg~Cvnt~G---s~~y~C~C~~Gyt---  724 (769)
                      ...|..++.|... ++.  ..|+|.+||.++|..|.....+.|+.. ..|..+|+|.....   ++...|.|.+||.   
T Consensus         9 ~~~C~~NA~C~r~~~g~--e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~   86 (99)
T 1ob1_C            9 KKQCPQNSGCFRHLDER--EECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPL   86 (99)
T ss_dssp             SCCCCTTEEEECCTTSC--CEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEE
T ss_pred             cCCCCCCCCeEEcCCCC--EEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccc
Confidence            3567788999874 344  899999999999999986323678622 35999999998742   2458999999974   


Q ss_pred             --CCCCC
Q psy9686         725 --GPHRE  729 (769)
Q Consensus       725 --G~~Ce  729 (769)
                        |..|.
T Consensus        87 ~~gvf~~   93 (99)
T 1ob1_C           87 FDGIFCS   93 (99)
T ss_dssp             GGGTEEC
T ss_pred             eeEEEec
Confidence              66554

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.13  E-value=0.002  Score=74.54  Aligned_cols=37  Identities=27%  Similarity=0.760  Sum_probs=32.1

Q ss_pred             cCCCCCCCCCCCcEEeeC-CCCccceEeeCC-CCCcCCCCcc
Q psy9686         515 LGGCAGRPCRNNGTCTPV-SGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~-~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      +|+|.++||+|+|+|++. .++   |.|.|+ +||+|.+|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~---y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQ---YKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTE---EEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCC---eEEecCCCCccCCCCCC
Confidence            478999999999999964 344   999999 9999999964

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.00  E-value=0.0021  Score=51.08  Aligned_cols=38  Identities=21%  Similarity=0.545  Sum_probs=30.9

Q ss_pred             CCCCC--CCCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccc
Q psy9686         516 GGCAG--RPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPV  558 (769)
Q Consensus       516 deC~s--~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC  558 (769)
                      |||..  .+|.+  .|+|++++   |.|.|++||.    |.+|++++||
T Consensus         2 dEC~~~~~~C~~--~C~nt~Gs---y~C~C~~Gy~L~~d~~~C~didec   45 (55)
T 2jkh_L            2 KLCSLDNGDCDQ--FCHEEQNS---VVCSCARGYTLADNGKACIPTGPY   45 (55)
T ss_dssp             CCTTTGGGGCSS--EEEEETTE---EEEECCTTEEECTTSSCEEESSSS
T ss_pred             ccccCCCCCcCc--EeEcCCCC---eEEeCCCCCEECCCCCeeccCccc
Confidence            57753  45864  89999987   9999999995    6779888877

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=95.99  E-value=0.004  Score=48.52  Aligned_cols=33  Identities=33%  Similarity=0.809  Sum_probs=27.3

Q ss_pred             cccCCCCC----------CCCCCCcEEeeCCCCccceEeeCCCCCcCC
Q psy9686         513 AALGGCAG----------RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ  550 (769)
Q Consensus       513 ~dideC~s----------~PC~ngGtCvn~~gs~~~y~C~C~~GftG~  550 (769)
                      .+||||..          .+|.+  +|+|++++   |.|.|++||++.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~--~C~n~~Gs---y~C~C~~Gy~~~   44 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH--LCHNYVGG---YFCSCRPGYELQ   44 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS--EEEEETTE---EEEECSTTCEEC
T ss_pred             CccccccCcccccccccCCCCCC--EeECCCCC---eEEECCCCCeEC
Confidence            46889964          67974  99999987   999999999753

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.62  E-value=0.0048  Score=71.12  Aligned_cols=39  Identities=31%  Similarity=0.816  Sum_probs=33.6

Q ss_pred             CccccCCCCCCCCCEEec-CCCCCceEEecC-CCCCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVA-SPGDKQITCLCL-KGFEGPHRELPV  732 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvn-t~Gs~~y~C~C~-~GytG~~Ce~di  732 (769)
                      +|+|. ++||+|+|+|++ ..++  |+|.|+ +||+|.+||..+
T Consensus         2 ~d~C~-~~PC~ngG~C~~~~~~~--y~C~C~~~G~~G~~Ce~~~   42 (553)
T 1q4g_A            2 VNPCC-YYPCQHQGICVRFGLDR--YQCDCTRTGYSGPNCTIPE   42 (553)
T ss_dssp             CCGGG-GCCCCTTCEEEEETTTE--EEEECTTSSEETTTTCEEC
T ss_pred             CCcCC-CCCCCCCCCcCCCCCCc--eEeeCCCCCcCCCCCCCCc
Confidence            47896 899999999999 6655  999999 999999998543

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=95.59  E-value=0.0026  Score=67.05  Aligned_cols=42  Identities=24%  Similarity=0.530  Sum_probs=34.4

Q ss_pred             ccCCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCc--CCCCcccccc
Q psy9686         514 ALGGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQ--GQSGLEITPV  558 (769)
Q Consensus       514 dideC~--s~PC~ngGtCvn~~gs~~~y~C~C~~Gft--G~~CedideC  558 (769)
                      |+|||.  .++|..++.|+|++++   |.|.|++||.  |..|.++|+.
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gs---y~C~C~~Gy~GnG~~C~d~d~P   49 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATG---FCCRCVANYTGNGRQCVAEGSP   49 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSC---EEEEECTTEEECSSSEEETTCE
T ss_pred             cchhccCCCCCCCCCCEeEcCCCC---eEEEcCCCCCCCCCcCCCCCCC
Confidence            689996  6789999999999998   9999999997  6679888764

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=95.49  E-value=0.03  Score=50.22  Aligned_cols=75  Identities=24%  Similarity=0.437  Sum_probs=56.3

Q ss_pred             ccccCCCCCCCCeEee-CCCCCceEeecCCCCeecCCCccccCCcc-ccCC-CCCCCCCEEecCCCCCceEEecCCCCC-
Q psy9686         649 ACVTLNPCQNNATCVA-SPGDKQITCLCLKGGTVSSEYCQFENSAA-CVTL-NPCQNNATCVASPGDKQITCLCLKGFE-  724 (769)
Q Consensus       649 eC~~~~pC~n~gtCvn-t~Gs~~y~C~C~~Gftg~G~~C~~~~ide-C~s~-~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt-  724 (769)
                      .|. ...|..++.|.. .+|.  .+|+|..||.++|..|.. + ++ |... ..|...|+|..+. ++.-.|.|.+||. 
T Consensus        12 ~C~-~t~Cp~NA~C~r~~~G~--e~CrCl~gY~~dg~~Cv~-~-Np~C~~nNGGCd~nAeC~~~~-~~ki~C~C~~~~~~   85 (105)
T 1n1i_A           12 KCI-DTNVPENAACYRYLDGT--EEWRCLLGFKEVGGKCVP-A-SITCEENNGGCAPEAECTMDD-KKEVECKCTKEGSE   85 (105)
T ss_dssp             SCC-SSCCCTTEEEEECTTSC--EEEEECTTEEECSSSEEE-C-CCCTTSGGGGSCTTSEEEECT-TSCEEEECCSTTCC
T ss_pred             Eec-CCCCCCCCCeEECCCCC--EeEEEECCeeccCCEEEE-C-CcchhhcCCCcCCCcEeEECC-CCEEEeECCCCCCc
Confidence            353 346778899988 4454  899999999999999995 3 66 7522 3499999999874 2458999999963 


Q ss_pred             ----CCCCC
Q psy9686         725 ----GPHRE  729 (769)
Q Consensus       725 ----G~~Ce  729 (769)
                          |..|.
T Consensus        86 ~~~~GvfC~   94 (105)
T 1n1i_A           86 PLFEGVFCS   94 (105)
T ss_dssp             EEGGGTEEC
T ss_pred             cccceEEEC
Confidence                66664

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=95.46  E-value=0.012  Score=54.39  Aligned_cols=61  Identities=21%  Similarity=0.323  Sum_probs=44.3

Q ss_pred             CCCCCCeEeeCCCCCce-EeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         655 PCQNNATCVASPGDKQI-TCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       655 pC~n~gtCvnt~Gs~~y-~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ||.|+|+|++......| +|.|++||+  |.+|+. +++     .+|..+      .| ..|++.+..++.|..|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~--G~~Ce~-~~~-----~~C~~g------~G-~~YrG~~~~t~sG~~Cq~   63 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFG--GQHCEI-DKS-----KTCYEG------NG-HFYRGKASTDTMGRPCLP   63 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEE--STTSCE-ESS-----CCSBCS------SC-TTCCSCCCBBTTSCBBCC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCC--Cccccc-cCc-----CCCccc------cc-ccceeeccccccCCcccC
Confidence            68999999987411125 999999999  999985 222     234332      22 249999999999999974

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=95.37  E-value=0.006  Score=50.98  Aligned_cols=41  Identities=22%  Similarity=0.424  Sum_probs=33.0

Q ss_pred             cccCCCCCC--CCCCCcEEeeCCC-CccceEeeCCCCCc----CCCCcccccc
Q psy9686         513 AALGGCAGR--PCRNNGTCTPVSG-GVVNFTCTCPSGGQ----GQSGLEITPV  558 (769)
Q Consensus       513 ~dideC~s~--PC~ngGtCvn~~g-s~~~y~C~C~~Gft----G~~CedideC  558 (769)
                      .|+++|..+  .|.+  .|+++++ +   |.|.|++||.    |.+|.+++||
T Consensus         3 ~d~~eC~~~nggC~h--~C~n~~g~s---~~C~C~~Gy~L~~D~~tC~d~dec   50 (69)
T 1kli_L            3 DDQLICVNENGGCEQ--YCSDHTGTK---RSCRCHEGYSLLADGVSCTPTVEY   50 (69)
T ss_dssp             SCCCCTTSGGGGCSS--EEEEETTTE---EEEECCTTEEECTTSSCEEECSSS
T ss_pred             cccccccCCCCCcCC--EeEcCCCCC---EEEeCCCCCeECCCCCcccCcccc
Confidence            467899643  4765  8999988 6   9999999995    6779888876

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=95.33  E-value=0.012  Score=45.76  Aligned_cols=38  Identities=26%  Similarity=0.588  Sum_probs=29.0

Q ss_pred             ccccccc---------CCCCCCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         646 NSAACVT---------LNPCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       646 ~ideC~~---------~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      ++|+|..         ..+|.  ++|+++.|+  |.|.|++||++  ++..|.
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gs--y~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGG--YFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEETTE--EEEECSTTCEECTTSSCEE
T ss_pred             ccccccCcccccccccCCCCC--CEeECCCCC--eEEECCCCCeECCCCCccC
Confidence            5788863         25786  499999987  99999999985  345554

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=95.30  E-value=0.013  Score=49.13  Aligned_cols=34  Identities=21%  Similarity=0.484  Sum_probs=27.2

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeec-CCCCee
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLC-LKGGTV  681 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C-~~Gftg  681 (769)
                      +||+|.. .++|.++++|+|+.|+  |+|.+ ..||.+
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gs--y~C~~~~~g~~~   37 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGG--YLCLPRSAAVIN   37 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCC--EEEEETTSCCCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCC--eEecccCCcccc
Confidence            5889973 4679988999999988  99984 457774

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.19  E-value=0.008  Score=69.63  Aligned_cols=37  Identities=32%  Similarity=0.768  Sum_probs=31.4

Q ss_pred             CccccCCCCCCCCCEEecC-CCCCceEEecC-CCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVAS-PGDKQITCLCL-KGFEGPHREL  730 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt-~Gs~~y~C~C~-~GytG~~Ce~  730 (769)
                      +|+|. ++||.|+|+|++. .++  |+|.|+ +||+|.+|+.
T Consensus         1 vd~C~-s~PC~ngG~C~~~~~~~--y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCC-SNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTT-TCCCCTTCEEEEEETTE--EEEECTTSSEETTTTCE
T ss_pred             CCCCC-CCCCCCCCEeeCCCCCC--eEEecCCCCccCCCCCC
Confidence            46896 8999999999963 344  999999 9999999984

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=95.15  E-value=0.0091  Score=47.37  Aligned_cols=42  Identities=19%  Similarity=0.532  Sum_probs=32.1

Q ss_pred             ccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee--cCCCccccCCcccc
Q psy9686         648 AACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQFENSAACV  695 (769)
Q Consensus       648 deC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~~~~ideC~  695 (769)
                      |+|.. ..+|.+  .|++++|+  |+|.|++||..  +|.+|+  ++++|.
T Consensus         2 dEC~~~~~~C~~--~C~nt~Gs--y~C~C~~Gy~L~~d~~~C~--didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCDQ--FCHEEQNS--VVCSCARGYTLADNGKACI--PTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCSS--EEEEETTE--EEEECCTTEEECTTSSCEE--ESSSSC
T ss_pred             ccccCCCCCcCc--EeEcCCCC--eEEeCCCCCEECCCCCeec--cCcccc
Confidence            46652 345764  89999987  99999999984  678888  677773

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=95.06  E-value=0.015  Score=56.28  Aligned_cols=69  Identities=25%  Similarity=0.634  Sum_probs=45.7

Q ss_pred             CCCCCCeEeeCCCCCceEe-ecCCCCeecCCCcccc-------C------CccccCCCCCCCC------CEEecCCCCCc
Q psy9686         655 PCQNNATCVASPGDKQITC-LCLKGGTVSSEYCQFE-------N------SAACVTLNPCQNN------ATCVASPGDKQ  714 (769)
Q Consensus       655 pC~n~gtCvnt~Gs~~y~C-~C~~Gftg~G~~C~~~-------~------ideC~s~~pC~ng------g~Cvnt~Gs~~  714 (769)
                      +|.++++|+...+++.+.| .|++||+  |..|+.-       .      ...|. +-.|.++      +.|....    
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~--G~~Ce~C~~g~~g~~~~~~~~~~~C~-~C~C~~~~~~~~~~~C~~~t----   74 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTA--GKRCELCDDGYFGDPLGSNGPVRLCR-PCQCNDNIDPNAVGNCNRLT----   74 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEE--STTSCEECTTEEEETTCTTSSCEEEE-ECCSTTCBCTTCSCCBCTTT----
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCc--CCCCcCCCCCCcCCcccccCCCCCCe-eCcCCCCCCcccCCcccCCC----
Confidence            5888999988764344899 7999999  8888730       0      01232 2345544      3565433    


Q ss_pred             eEEe-cCCCCCCCCCCC
Q psy9686         715 ITCL-CLKGFEGPHREL  730 (769)
Q Consensus       715 y~C~-C~~GytG~~Ce~  730 (769)
                      .+|. |++||+|.+|+.
T Consensus        75 G~C~~C~~g~~G~~Ce~   91 (162)
T 1klo_A           75 GECLKCIYNTAGFYCDR   91 (162)
T ss_dssp             CCBCCBCTTEETTTTCE
T ss_pred             CcccCCCCCCcCCCcCc
Confidence            3794 999999999874

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=94.98  E-value=0.017  Score=45.27  Aligned_cols=33  Identities=24%  Similarity=0.540  Sum_probs=26.8

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .+.|.|| +|......+.+.|.|++||+|.+|+.
T Consensus        13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             cCcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence            4678887 99875544568999999999999973

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=94.97  E-value=0.014  Score=48.95  Aligned_cols=33  Identities=18%  Similarity=0.520  Sum_probs=26.8

Q ss_pred             ccCCCCC--CCCCCCcEEeeCCCCccceEee-CCCCCcC
Q psy9686         514 ALGGCAG--RPCRNNGTCTPVSGGVVNFTCT-CPSGGQG  549 (769)
Q Consensus       514 dideC~s--~PC~ngGtCvn~~gs~~~y~C~-C~~GftG  549 (769)
                      |||||..  ++|.++++|+|++++   |.|. +..||.+
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gs---y~C~~~~~g~~~   37 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGG---YLCLPRSAAVIN   37 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCC---EEEEETTSCCCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCC---eEecccCCcccc
Confidence            6899964  679999999999998   9998 4567753

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=94.60  E-value=0.0071  Score=57.23  Aligned_cols=37  Identities=35%  Similarity=0.714  Sum_probs=31.6

Q ss_pred             cccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCC
Q psy9686         693 ACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       693 eC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~di  732 (769)
                      +|. ++||.+++.|.+..+.  |.|.|.+||+|.+||.+|
T Consensus       121 ~~~-~~pc~~~g~C~~~~~~--~~c~C~~g~~g~~Ce~~~  157 (157)
T 1g1t_A          121 ACT-NTSCSGHGECVETINN--YTCKCDPGFSGLKCEQIV  157 (157)
T ss_dssp             CCC-TTGGGGSEEEEEETTE--EEEEECTTEESTTSCEEC
T ss_pred             CCC-CCCCCCCCEeecCCCC--eeEECCCCccCccccccC
Confidence            564 6789988999998776  999999999999998654

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=94.27  E-value=0.031  Score=53.29  Aligned_cols=57  Identities=26%  Similarity=0.381  Sum_probs=38.3

Q ss_pred             CCCCCCEEecCCCCCce-EEecCCCCCCCCCCCCCC-CCCCCCC--CCCceeeCCCCcccc
Q psy9686         699 PCQNNATCVASPGDKQI-TCLCLKGFEGPHRELPVE-SVDEPPS--EDETSVDLQLGSQAN  755 (769)
Q Consensus       699 pC~ngg~Cvnt~Gs~~y-~C~C~~GytG~~Ce~did-eC~~npC--~~GtC~n~~ggy~C~  755 (769)
                      +|+|||+|+...-...+ +|.|++||.|.+|+.+++ +|...-.  -.|+..-+..|..|.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCCCCCccccccceecCCcCCccc
Confidence            79999999875211225 899999999999987765 3543211  134455566666665

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=93.84  E-value=0.033  Score=46.47  Aligned_cols=44  Identities=20%  Similarity=0.553  Sum_probs=33.9

Q ss_pred             ccccccc-CCCCCCCCeEeeCCC-CCceEeecCCCCee--cCCCccccCCcccc
Q psy9686         646 NSAACVT-LNPCQNNATCVASPG-DKQITCLCLKGGTV--SSEYCQFENSAACV  695 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~G-s~~y~C~C~~Gftg--~G~~C~~~~ideC~  695 (769)
                      ++++|.. ...|.+  .|+++.| +  |.|.|++||..  +|++|.  ++++|.
T Consensus         4 d~~eC~~~nggC~h--~C~n~~g~s--~~C~C~~Gy~L~~D~~tC~--d~dec~   51 (69)
T 1kli_L            4 DQLICVNENGGCEQ--YCSDHTGTK--RSCRCHEGYSLLADGVSCT--PTVEYP   51 (69)
T ss_dssp             CCCCTTSGGGGCSS--EEEEETTTE--EEEECCTTEEECTTSSCEE--ECSSSC
T ss_pred             ccccccCCCCCcCC--EeEcCCCCC--EEEeCCCCCeECCCCCccc--Cccccc
Confidence            5788863 345764  7999987 5  99999999985  778898  677773

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.80  E-value=0.044  Score=42.92  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=27.6

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEITP  557 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedide  557 (769)
                      .+.|.|| +|..... ...+.|.|++||+|.+|+..+.
T Consensus        13 ~~yC~nG-~C~~~~~-~~~~~C~C~~gy~G~RCe~~dL   48 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQ-EDKPACVCHSGYVGARCEHADL   48 (50)
T ss_pred             cCcccCC-EEeeccC-CCCeEEECCCCCcccCCCceee
Confidence            4679987 9986432 2358999999999999976543

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.67  E-value=0.031  Score=43.68  Aligned_cols=33  Identities=21%  Similarity=0.530  Sum_probs=25.8

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .+.|.| |+|.-....+.+.|.|++||+|.+||.
T Consensus        13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            467888 689644444458999999999999984

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.66  E-value=0.074  Score=41.60  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=25.6

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +.|.|| +|....+.+.+.|.|++||+|.+|+.
T Consensus        18 ~yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence            678885 99854444568999999999999973

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=93.52  E-value=0.021  Score=53.91  Aligned_cols=36  Identities=25%  Similarity=0.714  Sum_probs=32.1

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++|.++||.++|.|.+...+   |.|.|.+||+|..|+.
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~---~~c~C~~g~~g~~Ce~  155 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINN---YTCKCDPGFSGLKCEQ  155 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTE---EEEEECTTEESTTSCE
T ss_pred             CCCCCCCCCCCCEeecCCCC---eeEECCCCccCccccc
Confidence            57888999999999998776   9999999999999953

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=93.26  E-value=0.022  Score=44.54  Aligned_cols=33  Identities=18%  Similarity=0.441  Sum_probs=27.0

Q ss_pred             CCCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccc
Q psy9686         521 RPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPV  558 (769)
Q Consensus       521 ~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC  558 (769)
                      .+|.+  .|+|++++   |.|.|++||.    |.+|++++|+
T Consensus         6 g~C~~--~C~n~~gs---~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            6 GGCDQ--FCREERSE---VRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TSSSS--CCCEETTE---ECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCcCC--EeEcCCCC---eEEeCCCCcEECCCCCccccCCcc
Confidence            35755  79999887   9999999995    6779888876

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.13  E-value=0.029  Score=48.09  Aligned_cols=38  Identities=18%  Similarity=0.518  Sum_probs=27.2

Q ss_pred             ccccC--CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         692 AACVT--LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       692 deC~s--~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ++|..  .+.|.|| +|....+.+.+.|.|.+||+|.+|+.
T Consensus        38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG   77 (79)
T ss_dssp             -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred             CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence            45631  4679987 89644333348999999999999973

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=93.04  E-value=0.057  Score=59.37  Aligned_cols=37  Identities=27%  Similarity=0.618  Sum_probs=33.2

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCCC-CCcCCCCcc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCPS-GGQGQSGLE  554 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~~-GftG~~Ced  554 (769)
                      .++|.++||.++|+|++...+   |.|.|+. ||+|..|++
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~---~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDG---FSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSS---EEEECTTTSEESTTSCE
T ss_pred             CCCcccccCCCCCEecCCCCC---ceEeccCCcccCCCCCC
Confidence            468999999999999998776   9999996 999999965

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=92.82  E-value=0.04  Score=43.41  Aligned_cols=32  Identities=25%  Similarity=0.529  Sum_probs=26.8

Q ss_pred             CCCCCcEEeeCCC-CccceEeeCCCCCc----CCCCcccccc
Q psy9686         522 PCRNNGTCTPVSG-GVVNFTCTCPSGGQ----GQSGLEITPV  558 (769)
Q Consensus       522 PC~ngGtCvn~~g-s~~~y~C~C~~Gft----G~~CedideC  558 (769)
                      .|++  .|+++++ +   |.|.|++||.    |.+|++++||
T Consensus         8 gC~~--~C~n~~ggs---~~C~C~~Gy~L~~Dg~tC~d~dec   44 (53)
T 2bz6_L            8 GCEQ--YCSDHTGTK---RSCRCHEGYSLLADGVSCTPTVEY   44 (53)
T ss_dssp             GCSS--EEEEETTTE---EEEECCTTEEECTTSSCEEECSSS
T ss_pred             CcCC--EeEcCCCCC---EEeeCCCCCEECCCCCcccCCccc
Confidence            4655  7999987 5   9999999995    7779888887

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=92.62  E-value=0.019  Score=44.90  Aligned_cols=34  Identities=18%  Similarity=0.523  Sum_probs=27.2

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCC----CCCCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFE----GPHRELPVESVD  736 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt----G~~Ce~dideC~  736 (769)
                      ..|.+  .|++++|+  |+|.|++||.    |..|+ ++|||+
T Consensus         6 g~C~~--~C~n~~gs--~~C~C~~Gy~L~~d~~tC~-dide~p   43 (51)
T 1kig_L            6 GGCDQ--FCREERSE--VRCSCAHGYVLGDDSKSCV-STERFP   43 (51)
T ss_dssp             TSSSS--CCCEETTE--ECCCCCTTEEECTTSSCEE-ECSSSC
T ss_pred             CCcCC--EeEcCCCC--eEEeCCCCcEECCCCCccc-cCCccc
Confidence            45655  58999887  9999999995    78895 788764

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=92.22  E-value=0.045  Score=46.89  Aligned_cols=37  Identities=22%  Similarity=0.465  Sum_probs=27.1

Q ss_pred             CCCC---CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         516 GGCA---GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       516 deC~---s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++|.   .+.|.|| +|....+ ...+.|.|++||+|.+|+.
T Consensus        38 ~pC~~~~~~yClnG-~C~~i~~-~~~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           38 DPCLRKYKDFCIHG-ECKYVKE-LRAPSCICHPGYHGERCHG   77 (79)
T ss_dssp             -CTTTTTTTCCSSE-EECCBGG-GTBCCEEECTTEESTTCCE
T ss_pred             CCCCccccCcCCCC-EeeeecC-CCCeEEEcCCCcccccccc
Confidence            5676   6789996 9954332 1248999999999999953

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=91.92  E-value=0.048  Score=42.95  Aligned_cols=33  Identities=24%  Similarity=0.658  Sum_probs=27.1

Q ss_pred             CCCCCCEEecCCC-CCceEEecCCCCC----CCCCCCCCCCCC
Q psy9686         699 PCQNNATCVASPG-DKQITCLCLKGFE----GPHRELPVESVD  736 (769)
Q Consensus       699 pC~ngg~Cvnt~G-s~~y~C~C~~Gyt----G~~Ce~dideC~  736 (769)
                      .|.+  .|+++.+ +  |+|.|++||.    |..|+ ++|||+
T Consensus         8 gC~~--~C~n~~ggs--~~C~C~~Gy~L~~Dg~tC~-d~dec~   45 (53)
T 2bz6_L            8 GCEQ--YCSDHTGTK--RSCRCHEGYSLLADGVSCT-PTVEYP   45 (53)
T ss_dssp             GCSS--EEEEETTTE--EEEECCTTEEECTTSSCEE-ECSSSC
T ss_pred             CcCC--EeEcCCCCC--EEeeCCCCCEECCCCCccc-CCcccc
Confidence            4655  6999887 5  9999999995    78895 888874

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=91.90  E-value=0.077  Score=41.45  Aligned_cols=34  Identities=24%  Similarity=0.452  Sum_probs=25.7

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI  555 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi  555 (769)
                      .+.|.| |+|.-... ...+.|.|++||+|.+|+..
T Consensus        13 ~~yC~n-G~C~~~~~-~~~~~C~C~~gy~G~RCe~~   46 (50)
T 1iox_A           13 KHYCIK-GRCRFVVA-EQTPSCVCDEGYIGARCERV   46 (50)
T ss_dssp             TTSCTT-CCEEEETT-TTEEEECCCTTEETTTTCEE
T ss_pred             cCcccC-CEEEeEcC-CCCeEEECCCCcccCCCCee
Confidence            467999 79964322 23589999999999999754

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=91.13  E-value=0.12  Score=51.23  Aligned_cols=31  Identities=39%  Similarity=0.851  Sum_probs=26.7

Q ss_pred             cccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         693 ACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       693 eC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .|  ..+|.|||.|+.-     .+|.|++||+|..|+.
T Consensus       150 ~C--~~~C~ngG~Cv~P-----~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          150 EC--PGGCRNGGFCNER-----RICECPDGFHGPHCEG  180 (188)
T ss_dssp             CC--TTCCCTTCEECTT-----SCEECCTTCBTTTTCB
T ss_pred             cc--CCCCCCCCEeCCC-----CcccCcCCCCCCCCcC
Confidence            57  4789999999963     4899999999999984

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=90.76  E-value=0.21  Score=47.47  Aligned_cols=61  Identities=23%  Similarity=0.335  Sum_probs=42.3

Q ss_pred             CCCCCCeEeeCCCCCce-EeecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         655 PCQNNATCVASPGDKQI-TCLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       655 pC~n~gtCvnt~Gs~~y-~C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +|.|+|+|+...-...+ .|.|++||.  |..|+. +++     .      .|....| ..|+........|..|+.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~--G~~Cei-~~~-----~------~C~~g~G-~~YrG~~s~T~sG~~Cq~   75 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFG--GQHCEI-DKS-----K------TCYEGNG-HFYRGKASTDTMGRPCLP   75 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEE--STTSCE-ESS-----C------CEECTTC-TTCCSCCCBBTTSCBCCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCC--CCceec-ccc-----c------cCCCCCc-cccccceecCCcCCcccC
Confidence            79999999875211125 899999999  999985 221     1      2443333 248888887888888864

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=90.75  E-value=0.17  Score=39.50  Aligned_cols=36  Identities=22%  Similarity=0.485  Sum_probs=26.5

Q ss_pred             CCCC---CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         516 GGCA---GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       516 deC~---s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      ++|.   .+.|.| |+|.-... ...+.|.|++||+|.+|+
T Consensus        10 ~~C~~~~~~yC~n-G~C~~i~~-~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           10 NPCNAEFQNFCIH-GECKYIEH-LEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             CTTTTTGGGTCSS-SEEEEETT-TTEEEEECCSSCCSSSCC
T ss_pred             cccCchhhCcCCC-CEEEEecC-CCCeeEECCCCccccccc
Confidence            4665   367988 59984332 235899999999999995

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.58  E-value=0.11  Score=50.11  Aligned_cols=38  Identities=32%  Similarity=0.728  Sum_probs=29.3

Q ss_pred             ccccCCCCCCC-----CCCCcEEeeCCCCccceEeeCCCCCc----CCCCcc
Q psy9686         512 AAALGGCAGRP-----CRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLE  554 (769)
Q Consensus       512 c~dideC~s~P-----C~ngGtCvn~~gs~~~y~C~C~~Gft----G~~Ced  554 (769)
                      +.++++|...+     |.+  .|++++++   |.|.|++||+    +.+|++
T Consensus       121 ~~di~eC~~~~~~~~~C~~--~C~n~~g~---~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          121 AEDIDECQVAPGEAPTCDH--HCHNHLGG---FYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             EEECCTTCCCTTSCCSSSS--EEEEETTE---EEEECCTTEEECTTSSCEEE
T ss_pred             ccccCcccCCCCCCCccCC--ccccCCCC---EEEeCCCCcEECCCCCcccc
Confidence            34678897554     876  89999887   9999999997    555643

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=90.42  E-value=0.18  Score=55.41  Aligned_cols=38  Identities=29%  Similarity=0.690  Sum_probs=32.4

Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCC-CCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLK-GFEGPHRELP  731 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~-GytG~~Ce~d  731 (769)
                      .+.|. .+||.|+|+|++..+.  |.|.|+. ||.|+.|+..
T Consensus       185 ~~~C~-~~pC~n~g~C~~~~~~--~~C~C~~~~~~G~~C~~~  223 (410)
T 3asi_A          185 STTCQ-EDSCSNQGVCLQQWDG--FSCDCSMTSFSGPLCNDP  223 (410)
T ss_dssp             SSCCC-TTSSSTTCEEEECSSS--EEEECTTTSEESTTSCEE
T ss_pred             CCCcc-cccCCCCCEecCCCCC--ceEeccCCcccCCCCCCC
Confidence            45785 8999999999998665  9999996 9999999853

>1gbs_A Australian black SWAN egg white lysozyme; hydrolase (O-glycosyl); 1.50A {Cygnus atratus} SCOP: d.2.1.5 PDB: 1lsp_A* 153l_A 154l_A*

Probab=90.39  E-value=0.034  Score=54.97  Aligned_cols=43  Identities=14%  Similarity=0.299  Sum_probs=32.4

Q ss_pred             hcCCCCCCcccceE-eeccccCCCcccccCCCCCCCceeeeeeeccccc
Q psy9686         293 QRGIARRDVPTWVC-IATKESNRNSNARSPKNGNGSRDHGIFQINDKYW  340 (769)
Q Consensus       293 ~~g~~~~~l~~wvC-la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~W  340 (769)
                      ++|++-    .+|- |++.||+||+.|+|. +...+.++||+||+..++
T Consensus        58 ~~gv~p----~Ll~Aii~~ES~f~p~A~n~-~~S~~gA~GLMQimp~t~  101 (185)
T 1gbs_A           58 KLCVEP----AVIAGIISRESHAGKVLKNG-WGDRGNGFGLMQVDKRSH  101 (185)
T ss_dssp             HHTCCH----HHHHHHHHHHHGGGTTCBTT-BCTTSCEETTTTEETTTS
T ss_pred             HhCcCH----HHHHHHHHHHCCCCCCCcCC-CCCCCCCEeeeeechhhc
Confidence            356663    2332 789999999999963 345678999999999865

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=89.60  E-value=0.18  Score=50.02  Aligned_cols=31  Identities=35%  Similarity=0.805  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         517 GCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       517 eC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      .|. .+|.|||.|+. |     ..|.|++||+|..|+.
T Consensus       150 ~C~-~~C~ngG~Cv~-P-----~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          150 ECP-GGCRNGGFCNE-R-----RICECPDGFHGPHCEG  180 (188)
T ss_dssp             CCT-TCCCTTCEECT-T-----SCEECCTTCBTTTTCB
T ss_pred             ccC-CCCCCCCEeCC-C-----CcccCcCCCCCCCCcC
Confidence            565 57999999986 3     4699999999999954

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=89.07  E-value=0.19  Score=44.70  Aligned_cols=71  Identities=23%  Similarity=0.464  Sum_probs=48.8

Q ss_pred             cCCCcccc-CCCCcccccCCCCCCC--cccccccccccc-CCCCCCCCeEeeCCC---CCceEeecCCCCe---ecCCCc
Q psy9686         617 QNISPLKD-GNLSFYCNCTEDFTGE--YCQFENSAACVT-LNPCQNNATCVASPG---DKQITCLCLKGGT---VSSEYC  686 (769)
Q Consensus       617 ~ngg~C~n-~~gsy~C~C~~Gy~G~--~Ce~~~ideC~~-~~pC~n~gtCvnt~G---s~~y~C~C~~Gft---g~G~~C  686 (769)
                      ..++.|.+ ..+...|.|.+||.|+  .|.....+.|.. ...|..+++|.....   ++...|.|.+||.   ++|..|
T Consensus        13 ~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~   92 (99)
T 1ob1_C           13 PQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFC   92 (99)
T ss_dssp             CTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTEE
T ss_pred             CCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEEe
Confidence            44566766 4678899999999754  777432257863 245999999987742   1247999999976   245555


Q ss_pred             c
Q psy9686         687 Q  687 (769)
Q Consensus       687 ~  687 (769)
                      .
T Consensus        93 ~   93 (99)
T 1ob1_C           93 S   93 (99)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=88.96  E-value=0.21  Score=62.76  Aligned_cols=41  Identities=27%  Similarity=0.643  Sum_probs=34.8

Q ss_pred             Cccc-cCCCCCCCCCCCcEEeeCCCCccceEeeCC-CCCcCCCCcc
Q psy9686         511 GAAA-LGGCAGRPCRNNGTCTPVSGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       511 gc~d-ideC~s~PC~ngGtCvn~~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      +|.. .+.|..+||.|+|+|.+...+   |.|.|+ +||+|..|+.
T Consensus      1012 gC~~~~~~C~~~pC~ngG~C~~~~~~---~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A         1012 GCEGPSTTCQEDSCSNQGVCLQQWDG---FSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp             SSSCCCCCCCTTSSSSSCEEEEETTE---EEEECTTSSCBSTTSCB
T ss_pred             eeecccCceECCcCCCCCEeCCCCCC---CEEECCCCCCCCCCccC
Confidence            3543 468999999999999998776   999999 6999999954

>3gxr_A Goose-type lysozyme 1; atlantic COD, FISH lysozyme, active site residues, substrate sites, surface potential, muramidase activity; HET: NAG; 1.70A {Gadus morhua} SCOP: d.2.1.5 PDB: 3gxk_A*

Probab=87.60  E-value=0.069  Score=52.94  Aligned_cols=32  Identities=19%  Similarity=0.369  Sum_probs=26.3

Q ss_pred             eeccccCCCcccccCC---CCCCCceeeeeeeccc
Q psy9686         307 IATKESNRNSNARSPK---NGNGSRDHGIFQINDK  338 (769)
Q Consensus       307 la~~eS~~~t~a~~~~---~~~gs~~yGifQIn~~  338 (769)
                      |++.||+||+.|+++.   +.+.+..+||+||+..
T Consensus        67 ii~~ES~f~p~a~S~~~~~~~~~~gA~GLMQimp~  101 (187)
T 3gxr_A           67 IISRESRAGNVIFNTTPPGWGDNYNGFGLMQVDKR  101 (187)
T ss_dssp             HHHHHHTTTTTTTTSSSTTEETTTTEETTTTEETT
T ss_pred             HHhhhcccCceEecCCCCCcccCcCceeeeeechh
Confidence            8999999999999721   2236789999999986

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=87.58  E-value=0.28  Score=61.69  Aligned_cols=37  Identities=32%  Similarity=0.746  Sum_probs=33.2

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCC-CCCcCCCCcc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      .+.|.++||.++|+|.+...+   |.|.|+ +||.|..|+.
T Consensus       619 ~~~C~~~pC~ngg~C~~~~~~---~~C~C~~~g~~G~~C~~  656 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDGWNR---YVCDCSGTGYLGRSCER  656 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEECSSS---EEEECTTTTEESTTSCE
T ss_pred             CCCCCccCCCCCCEEeCCCCC---eEEECCCCCcccccCcc
Confidence            478999999999999998776   999999 7999999953

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=86.82  E-value=0.2  Score=58.95  Aligned_cols=46  Identities=17%  Similarity=0.409  Sum_probs=38.3

Q ss_pred             eecCCCCeecCCCccccCCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         673 CLCLKGGTVSSEYCQFENSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       673 C~C~~Gftg~G~~C~~~~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ..|.+||.  |..|..  ...|  +..|..+|.|++.      +|.|.+||.|..|+.
T Consensus       520 ~~C~~gw~--g~dc~i--~~~C--p~~C~ghG~C~~G------~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          520 FDKQQTWA--IDNVYI--GDGC--LDMCSGHGRCVQG------SCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CCTTCCEE--EEEEEE--ESCS--SGGGGGSEEEETT------EEEECTTEESTTSCE
T ss_pred             CccCCCcc--cccccc--cCCC--CcccCCCcEECCC------CEeeCCCccCCCcCc
Confidence            37899999  778873  2468  5789999999984      899999999999974

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=86.79  E-value=0.7  Score=37.04  Aligned_cols=29  Identities=24%  Similarity=0.752  Sum_probs=23.3

Q ss_pred             CCCCCCeEeeCC-CCCceEeecCCCCee--cCCCcc
Q psy9686         655 PCQNNATCVASP-GDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       655 pC~n~gtCvnt~-Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      .|.+  .|++++ |+  |.|.|++||..  +|++|.
T Consensus         8 gC~~--~C~n~~~gs--~~C~C~~Gy~L~~D~~tC~   39 (59)
T 2wph_E            8 RCEQ--FCKNSADNK--VVCSCTEGYRLAENQKSCE   39 (59)
T ss_dssp             GCSS--EEEECSTTC--EEEECCTTEEECTTSSCEE
T ss_pred             CcCC--EeEeCCCCC--EEeeCCCCcEECCCCCccc
Confidence            4553  799988 46  99999999984  678887

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=86.11  E-value=0.26  Score=47.34  Aligned_cols=48  Identities=21%  Similarity=0.525  Sum_probs=34.9

Q ss_pred             CCCCCCccccccccccccCC----CCCCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         635 EDFTGEYCQFENSAACVTLN----PCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       635 ~Gy~G~~Ce~~~ideC~~~~----pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      .||.+..+.. ++++|....    +|.+  .|+++.|+  |.|.|++||++  ++.+|+
T Consensus       113 ~Gf~~~~~~~-di~eC~~~~~~~~~C~~--~C~n~~g~--~~C~C~~Gy~l~~d~~~C~  166 (170)
T 1szb_A          113 TGFEAFYAAE-DIDECQVAPGEAPTCDH--HCHNHLGG--FYCSCRAGYVLHRNKRTCS  166 (170)
T ss_dssp             CEEEEEEEEE-ECCTTCCCTTSCCSSSS--EEEEETTE--EEEECCTTEEECTTSSCEE
T ss_pred             cCceeeeecc-ccCcccCCCCCCCccCC--ccccCCCC--EEEeCCCCcEECCCCCccc
Confidence            6777766543 478897322    2875  79999887  99999999984  556665

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=84.19  E-value=0.8  Score=41.09  Aligned_cols=68  Identities=21%  Similarity=0.447  Sum_probs=48.3

Q ss_pred             cCCCcccc-CCCCcccccCCCCC--CCccccccccc-ccc-CCCCCCCCeEeeCCCCCceEeecCCCCe---ecCCCcc
Q psy9686         617 QNISPLKD-GNLSFYCNCTEDFT--GEYCQFENSAA-CVT-LNPCQNNATCVASPGDKQITCLCLKGGT---VSSEYCQ  687 (769)
Q Consensus       617 ~ngg~C~n-~~gsy~C~C~~Gy~--G~~Ce~~~ide-C~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gft---g~G~~C~  687 (769)
                      ..++.|.. ..+...|.|..||.  |..|..  +++ |.. ...|..+++|..... ..-.|.|.++|.   .+|..|.
T Consensus        19 p~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~--~Np~C~~nNGGCd~nAeC~~~~~-~ki~C~C~~~~~~~~~~GvfC~   94 (105)
T 1n1i_A           19 PENAACYRYLDGTEEWRCLLGFKEVGGKCVP--ASITCEENNGGCAPEAECTMDDK-KEVECKCTKEGSEPLFEGVFCS   94 (105)
T ss_dssp             CTTEEEEECTTSCEEEEECTTEEECSSSEEE--CCCCTTSGGGGSCTTSEEEECTT-SCEEEECCSTTCCEEGGGTEEC
T ss_pred             CCCCCeEECCCCCEeEEEECCeeccCCEEEE--CCcchhhcCCCcCCCcEeEECCC-CEEEeECCCCCCccccceEEEC
Confidence            44566776 67788999999997  457873  466 753 345999999998741 237899999975   2465565

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=83.22  E-value=0.25  Score=54.10  Aligned_cols=19  Identities=26%  Similarity=0.606  Sum_probs=16.2

Q ss_pred             CCCCcccccCCCCCCCccc
Q psy9686         625 GNLSFYCNCTEDFTGEYCQ  643 (769)
Q Consensus       625 ~~gsy~C~C~~Gy~G~~Ce  643 (769)
                      ..+.+.|.|.++|.|..|+
T Consensus       268 ~~~~~~C~C~~nt~G~~Ce  286 (375)
T 4aqt_A          268 EFDKLMCNCKHNTYGVDCE  286 (375)
T ss_dssp             TTSCEEECCCTTEESTTSC
T ss_pred             CCCCeeeeCcCCCcCCCcc
Confidence            3456789999999999998

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=82.81  E-value=0.74  Score=36.90  Aligned_cols=30  Identities=20%  Similarity=0.503  Sum_probs=22.9

Q ss_pred             CCCCCcEEeeCC-CCccceEeeCCCCCc----CCCCcccc
Q psy9686         522 PCRNNGTCTPVS-GGVVNFTCTCPSGGQ----GQSGLEIT  556 (769)
Q Consensus       522 PC~ngGtCvn~~-gs~~~y~C~C~~Gft----G~~Cedid  556 (769)
                      .|.+  .|++++ ++   |.|.|++||.    |..|++++
T Consensus         8 gC~~--~C~n~~~gs---~~C~C~~Gy~L~~D~~tC~d~~   42 (59)
T 2wph_E            8 RCEQ--FCKNSADNK---VVCSCTEGYRLAENQKSCEPAV   42 (59)
T ss_dssp             GCSS--EEEECSTTC---EEEECCTTEEECTTSSCEEESS
T ss_pred             CcCC--EeEeCCCCC---EEeeCCCCcEECCCCCcccCCC
Confidence            4655  899998 46   9999999995    56676543

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=80.85  E-value=0.82  Score=43.05  Aligned_cols=35  Identities=26%  Similarity=0.721  Sum_probs=26.8

Q ss_pred             cccCCCCC---CCCCCCcEEeeCCCCccceEeeCCCCCc----CCCC
Q psy9686         513 AALGGCAG---RPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSG  552 (769)
Q Consensus       513 ~dideC~s---~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~C  552 (769)
                      .++++|..   .+|.  ..|.+.+++   |.|.|++||+    |..|
T Consensus       115 ~d~~eC~~~~~~~C~--~~C~n~~g~---~~C~C~~Gy~l~~~~~~C  156 (159)
T 1nzi_A          115 TDINECTDFVDVPCS--HFCNNFIGG---YFCSCPPEYFLHDDMKNC  156 (159)
T ss_dssp             EECCTTTC-CCCCSS--SEEEEETTE---EEEECCTTCEECTTSSCE
T ss_pred             ccCcccCCCCCCCCC--CcccCcCCC---EEEecCCCcEECCCCCcc
Confidence            46788864   3575  489999886   9999999997    4555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	769
d1qqya_	130	d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), mil	5e-33
d1qqya_	130	d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), mil	3e-18
d1gd6a_	119	d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [Tax	3e-32
d1gd6a_	119	d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [Tax	9e-19
d2nwdx1	130	d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [	7e-32
d2nwdx1	130	d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [	4e-17
d1yroa1	123	d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus mu	3e-31
d1yroa1	123	d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus mu	5e-17
d1b9oa_	123	d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapien	3e-31
d1b9oa_	123	d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapien	1e-16
d1hfxa_	123	d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia	5e-31
d1hfxa_	123	d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia	1e-16
d2vb1a1	129	d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus	4e-29
d2vb1a1	129	d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus	1e-17
d1lmqa_	129	d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus	6e-29
d1lmqa_	129	d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus	1e-16
d1juga_	125	d.2.1.2 (A:) Lysozyme {Australian echidna (Tachygl	2e-28
d1juga_	125	d.2.1.2 (A:) Lysozyme {Australian echidna (Tachygl	3e-17
d1tpga1	41	g.3.11.1 (A:51-91) Plasminogen activator (tissue-t	2e-05
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	3e-05
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	0.002
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	7e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	1e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	1e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	2e-04
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	1e-04
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	2e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	1e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	0.003
d1nqlb_	48	g.3.11.1 (B:) Epidermal growth factor, EGF {Human	2e-04
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	2e-04
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	2e-04
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	2e-04
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	3e-04
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	4e-04
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	0.002
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	7e-04
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	0.002
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	0.001
d1q4ga2	42	g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EG	0.002

>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId: 9615]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Dog (Canis familiaris), milk [TaxId: 9615]

 Score =  121 bits (305), Expect = 5e-33
 Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 10/129 (7%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L      G     +  WVC+A  ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 2   KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 61

Query: 337 DKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
            K+WC ++   +   C+  CS F D+NI DD+AC  ++          G  AW  +  +C
Sbjct: 62  SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN-----GMSAWVAWVKHC 116

Query: 395 NTNSKVSTY 403
                +S Y
Sbjct: 117 K-GKDLSKY 124

>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId: 9615]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Dog (Canis familiaris), milk [TaxId: 9615]

 Score = 79.6 bits (196), Expect = 3e-18
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 15  GSRDHGIFQINDKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
           GS D+GIFQ+N K+WC ++   +   C+  CS F D+NI DD+AC  ++          G
Sbjct: 51  GSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN-----G 105

Query: 74  FQAWSTY-HYCNTNSKVSTYYS 94
             AW  +  +C     +S Y +
Sbjct: 106 MSAWVAWVKHCK-GKDLSKYLA 126

>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]} Length = 119

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Silkworm (Bombyx mori) [TaxId: 7091]

 Score =  118 bits (298), Expect = 3e-32
 Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K F  C L   L +  G     +  WVC+   ES+R+++  +  N NGS+D+G+FQIND+
Sbjct: 1   KTFTRCGLVHELRKH-GFEENLMRNWVCLVEHESSRDTSKTNT-NRNGSKDYGLFQINDR 58

Query: 339 YWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
           YWC+     GK+C+ KCS    ++IT    C  KI+ +      + F AW  + ++C 
Sbjct: 59  YWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKR------HRFDAWYGWKNHCQ 110

>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]} Length = 119

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Silkworm (Bombyx mori) [TaxId: 7091]

 Score = 80.7 bits (199), Expect = 9e-19
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGF 74
           GS+D+G+FQIND+YWC+     GK+C+ KCS    ++IT    C  KI+ +      + F
Sbjct: 46  GSKDYGLFQINDRYWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKR------HRF 99

Query: 75  QAWSTY-HYCN 84
            AW  + ++C 
Sbjct: 100 DAWYGWKNHCQ 110

>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 7e-32
 Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 11/130 (8%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K F  CELA+ L R    G     +  W+C+A  ES  N+ A +   G+ S D+GIFQIN
Sbjct: 1   KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60

Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC       A   CH  CS+   +NI D VAC  ++    Q     G +AW  + + 
Sbjct: 61  SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115

Query: 394 CNTNSKVSTY 403
           C  N  V  Y
Sbjct: 116 CQ-NRDVRQY 124

>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (187), Expect = 4e-17
 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S D+GIFQIN +YWC       A   CH  CS+   +NI D VAC  ++    Q     
Sbjct: 50  RSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ----- 104

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G +AW  + + C  N  V  Y
Sbjct: 105 GIRAWVAWRNRCQ-NRDVRQY 124

>d1yroa1 d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (291), Expect = 3e-31
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 280 RFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY 339
               C+++  +    G     +  W C+    S  ++ A    N NGS ++G+FQI+D++
Sbjct: 2   ELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVV--NDNGSTEYGLFQISDRF 59

Query: 340 WCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
           WC +S    +   C   C    D+ + DD+AC  KI +        G   W  Y   C+
Sbjct: 60  WCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------KGIDYWKAYKPMCS 112

>d1yroa1 d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.7 bits (186), Expect = 5e-17
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS ++G+FQI+D++WC +S    +   C   C    D+ + DD+AC  KI +        
Sbjct: 46  GSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------K 99

Query: 73  GFQAWSTY-HYCN 84
           G   W  Y   C+
Sbjct: 100 GIDYWKAYKPMCS 112

>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 9606]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 3e-31
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 11/120 (9%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+F  CEL++ L    G     +P  +C     S  ++ A      + S ++G+FQI++K
Sbjct: 1   KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENDESTEYGLFQISNK 58

Query: 339 YWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
            WC +S    +   C   C  F D++ITDD+ C  KI          G   W  +   C 
Sbjct: 59  LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCT 112

>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 9606]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (184), Expect = 1e-16
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
            S ++G+FQI++K WC +S    +   C   C  F D++ITDD+ C  KI          
Sbjct: 46  ESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------K 99

Query: 73  GFQAWSTY-HYCN 84
           G   W  +   C 
Sbjct: 100 GIDYWLAHKALCT 112

>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  115 bits (289), Expect = 5e-31
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 11/120 (9%)

Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
           K+   C L+  L    G     +P W+CI    S  ++ A      +  +++G+FQINDK
Sbjct: 1   KQLTKCALSHELNDLAGYRDITLPEWLCIIFHISGYDTQAIV--KNSDHKEYGLFQINDK 58

Query: 339 YWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
            +C +S    +   C   C    D+++TDD+ CV KI          G   W  +   C+
Sbjct: 59  DFCESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDI------KGIDYWLAHKPLCS 112

>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 123

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 74.5 bits (183), Expect = 1e-16
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)

Query: 16  SRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
            +++G+FQINDK +C +S    +   C   C    D+++TDD+ CV KI          G
Sbjct: 47  HKEYGLFQINDKDFCESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDI------KG 100

Query: 74  FQAWSTY-HYCN 84
              W  +   C+
Sbjct: 101 IDYWLAHKPLCS 112

>d2vb1a1 d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  110 bits (276), Expect = 4e-29
 Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K FG CELA  + R          +  WVC A  ESN N+ A +  N +GS D+GI QIN
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQIN 59

Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            ++WC       +   C+  CS+   ++IT  V C  KI S        G  AW  + + 
Sbjct: 60  SRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN-----GMNAWVAWRNR 114

Query: 394 CNTNSKVSTY 403
           C   + V  +
Sbjct: 115 CK-GTDVQAW 123

>d2vb1a1 d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 77.6 bits (191), Expect = 1e-17
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN ++WC       +   C+  CS+   ++IT  V C  KI S        
Sbjct: 49  GSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN----- 103

Query: 73  GFQAWSTY-HYCNTNSKVSTY 92
           G  AW  + + C   + V  +
Sbjct: 104 GMNAWVAWRNRCK-GTDVQAW 123

>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]

 Score =  109 bits (275), Expect = 6e-29
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K +  CELA+ L      G A   +P WVC++  ES+ N+ A +  N +GS D+GIFQIN
Sbjct: 1   KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNR-NTDGSTDYGIFQIN 59

Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC       A   C  +CS    +++T  + C  ++          G  AW  +  +
Sbjct: 60  SRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN-----GIGAWVAWRLH 114

Query: 394 C 394
           C
Sbjct: 115 C 115

>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]

 Score = 74.9 bits (184), Expect = 1e-16
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 15  GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GIFQIN +YWC       A   C  +CS    +++T  + C  ++          
Sbjct: 49  GSTDYGIFQINSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN----- 103

Query: 73  GFQAWSTY-HYC 83
           G  AW  +  +C
Sbjct: 104 GIGAWVAWRLHC 115

>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]} Length = 125

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
           K     EL K LV Q   G     +P WVC A  ES+ N+ A +    +GS D+GI QIN
Sbjct: 1   KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNHNT-DGSTDYGILQIN 59

Query: 337 DKYWCTASGPAGK--ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
            +YWC      G    C+  CS   D++ITDD+ C  KI  + +     G   W  +   
Sbjct: 60  SRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK-----GLTPWVAWKSK 114

Query: 394 CNTNSKVSTY 403
           C     +S +
Sbjct: 115 CR-GHDLSKF 123

>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]} Length = 125

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]

 Score = 76.4 bits (188), Expect = 3e-17
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)

Query: 15  GSRDHGIFQINDKYWCTASGPAGK--ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
           GS D+GI QIN +YWC      G    C+  CS   D++ITDD+ C  KI  + +     
Sbjct: 49  GSTDYGILQINSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK----- 103

Query: 73  GFQAWSTY-HYCNTNSKVSTYY 93
           G   W  +   C     +S + 
Sbjct: 104 GLTPWVAWKSKCR-GHDLSKFK 124

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 10/37 (27%), Positives = 14/37 (37%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVES 734
             C N  TC  +       C C +GF G   E+   +
Sbjct: 4   PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
             C N   C+        TC C+ G+ G   +
Sbjct: 12  GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
                C N G C  +   + ++TC C  G  G 
Sbjct: 9   SYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGD 40

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 7e-05
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL 730
           NPC N  +C          C C  GFEG + EL
Sbjct: 9   NPCLNGGSCKDDINS--YECWCPFGFEGKNCEL 39

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C   PC N G+C         + C CP G +G+
Sbjct: 6   CESNPCLNGGSCKDDINS---YECWCPFGFEGK 35

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           +PCQN  +C          C CL  FEG +
Sbjct: 8   SPCQNGGSCKDQLQS--YICFCLPAFEGRN 35

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           CA  PC+N G+C         + C C    +G+
Sbjct: 5   CASSPCQNGGSCKDQLQS---YICFCLPAFEGR 34

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV 732
           +PCQN   C    G+   TC CL+GFEG + EL  
Sbjct: 6   SPCQNQGKCKDGLGE--YTCTCLEGFEGKNCELFT 38

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C   PC+N G C    G    +TCTC  G +G+
Sbjct: 3   CETSPCQNQGKCKDGLGE---YTCTCLEGFEGK 32

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           NPC++   C+ + G     C CL+G+ GP 
Sbjct: 11  NPCEHAGKCINTLGS--FECQCLQGYTGPR 38

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 3/29 (10%)

Query: 522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           PC + G C    G    F C C  G  G 
Sbjct: 12  PCEHAGKCINTLGS---FECQCLQGYTGP 37

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 6/30 (20%), Positives = 12/30 (40%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
             C ++  C+      +  C C+ G+ G  
Sbjct: 10  GYCLHDGVCMYIEALDKYACNCVVGYIGER 39

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C   PC+N+ TC    G    F C C  G +G 
Sbjct: 4   CVSNPCQNDATCLDQIGE---FQCICMPGYEGV 33

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
           NPCQN+ATC+   G+    C+C+ G+EG H
Sbjct: 7   NPCQNDATCLDQIGE--FQCICMPGYEGVH 34

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)

Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
           +PC +N  C+    +    C C  GF G   +
Sbjct: 6   SPCLHNGRCLDKINE--FQCECPTGFTGHLCQ 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           CA  PC +NG C         F C CP+G  G 
Sbjct: 3   CASSPCLHNGRCLDKINE---FQCECPTGFTGH 32

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVE 733
           A+C     C     C+ + G+   TC C  GF GP  E   +
Sbjct: 2   ASCQD-MSCSKQGECLETIGN--YTCSCYPGFYGPECEYVRD 40

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C    C   G C    G    +TC+C  G  G 
Sbjct: 4   CQDMSCSKQGECLETIGN---YTCSCYPGFYGP 33

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
           +AAC     C  +  CV +  +   TC C  GF G   E
Sbjct: 1   TAACTN-TSCSGHGECVETINN--YTCKCDPGFSGLKCE 36

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 3/33 (9%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
           C    C  +G C         +TC C  G  G 
Sbjct: 4   CTNTSCSGHGECVETINN---YTCKCDPGFSGL 33

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGG 547
           C   PC+N G C         + C C   G
Sbjct: 4   CCSNPCQNRGECMSTGFD--QYKCDCTRTG 31

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGG 547
           C   PC++ G C         + C C   G
Sbjct: 5   CCYYPCQHQGICVRFGLD--RYQCDCTRTG 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	769
d1lmqa_	129	Lysozyme {Rainbow trout (Oncorhynchus mykiss) [Tax	100.0
d1juga_	125	Lysozyme {Australian echidna (Tachyglossus aculeat	100.0
d2vb1a1	129	Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}	100.0
d1qqya_	130	Lysozyme {Dog (Canis familiaris), milk [TaxId: 961	100.0
d1b9oa_	123	alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 96	100.0
d2nwdx1	130	Lysozyme {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gd6a_	119	Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}	100.0
d1hfxa_	123	alpha-Lactalbumin {Guinea pig (Cavia porcellus) [T	100.0
d1yroa1	123	alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10	100.0
d2vb1a1	129	Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}	99.96
d1lmqa_	129	Lysozyme {Rainbow trout (Oncorhynchus mykiss) [Tax	99.96
d1juga_	125	Lysozyme {Australian echidna (Tachyglossus aculeat	99.95
d1qqya_	130	Lysozyme {Dog (Canis familiaris), milk [TaxId: 961	99.95
d2nwdx1	130	Lysozyme {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1b9oa_	123	alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 96	99.94
d1gd6a_	119	Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}	99.94
d1hfxa_	123	alpha-Lactalbumin {Guinea pig (Cavia porcellus) [T	99.93
d1yroa1	123	alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10	99.93
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.59
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.56
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.55
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.48
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.46
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.43
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.42
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.42
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.41
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.4
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.37
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.31
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.26
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.25
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.17
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.15
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.08
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.01
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.98
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.97
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.92
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.91
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.83
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.75
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.66
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.62
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.62
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.61
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.6
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.52
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.52
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.41
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.38
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.26
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.15
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.06
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.03
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.98
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.92
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.91
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	96.85
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	96.83
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.82
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	96.75
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.66
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	96.49
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	96.39
d1szba2	45	Mannose-binding protein associated serine protease	96.27
d1nt0a3	45	Mannose-binding protein associated serine protease	96.27
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	96.13
d1nt0a3	45	Mannose-binding protein associated serine protease	95.82
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.81
d1szba2	45	Mannose-binding protein associated serine protease	95.67
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	95.63
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.63
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.59
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.03
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.82
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	94.8
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	94.78
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.25
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.24
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	94.08
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.98
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	93.83
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	92.6
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	91.4
d1xsfa1	86	Probable resuscitation-promoting factor RpfB {Myco	91.23
d1gbsa_	185	Lysozyme {Australian black swan (Cygnus atratus) [	90.15
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	89.62
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	85.65
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	85.27
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	85.21
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	83.98
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	83.84
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	81.81
d1qsaa2	168	70 kDa soluble lytic transglycosylase, SLT70 {Esch	81.44

>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]

Probab=100.00  E-value=4.8e-49  Score=365.14  Aligned_cols=124  Identities=32%  Similarity=0.710  Sum_probs=115.0

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |||+|||||++|++.  +|||+++|++|||||+|||+|||+|+++ |.|||+||||||||++|||++++++  +|.|+|+
T Consensus         1 Ki~~rCeLAr~L~~~gl~gf~~~~l~~WvCla~~ES~~nT~a~~~-n~~gS~dyGiFQIn~~~WC~~~~~~~~~N~C~i~   79 (129)
T d1lmqa_           1 KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNR-NTDGSTDYGIFQINSRYWCDDGRTPGAKNVCGIR   79 (129)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTSCBCSCCTTCCCTTCSB
T ss_pred             CcccHhHHHHHHHHcCCcCCChhhHHHHHHHHHHhccCccccccc-CCCCCCCcceeeecchhcccCCCCCCCCCCCCCc
Confidence            799999999999985  3579999999999999999999999997 6799999999999999999987654  6899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCc
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDM  409 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~  409 (769)
                      |++||||||+|||+|||+|+.++     +||+||++|+ +|+|+ +|+.|...|++
T Consensus        80 C~~Ll~ddI~ddi~CAkkIv~~~-----~G~~AW~~w~~~C~g~-~L~~~i~~C~l  129 (129)
T d1lmqa_          80 CSQLLTDDLTVAIRCAKRVVLDP-----NGIGAWVAWRLHCQNQ-DLRSYVAGCGV  129 (129)
T ss_dssp             GGGGSSSSCHHHHHHHHHHTTST-----TGGGGCHHHHHHTTTS-CCGGGTTTSCC
T ss_pred             HHHHcCCCcHHHHHHHHHHHhcc-----cCcchhHHHHHHcCCC-ChHHHHhcCCC
Confidence            99999999999999999999886     8999999999 99996 99999887764

>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]

Probab=100.00  E-value=4.8e-49  Score=362.38  Aligned_cols=119  Identities=37%  Similarity=0.744  Sum_probs=111.6

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |||+||||||+|+++  +||++++|++|||||+|||+|||+|+++ |.|||+|||||||||+|||++++++  +|.|+|+
T Consensus         1 Ki~~rCelar~L~~~gl~gf~~~~l~~WvCla~~ES~~nT~a~n~-n~~GS~dyGiFQIns~~WC~~~~~~~~~n~C~i~   79 (125)
T d1juga_           1 KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNH-NTDGSTDYGILQINSRYWCHDGKTPGSKNACNIS   79 (125)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSB
T ss_pred             CcccHHHHHHHHHHcCCCCCCcccHhHHHHhhhhhcCCCCcceec-CCCCCcccCeEEecchhhccCCCCCCCcCCCCCc
Confidence            799999999999985  6788999999999999999999999996 7899999999999999999987654  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      |++||||||+|||+|||+|++++     +||+||++|+ +|+|+ ||++|.
T Consensus        80 C~~Ll~ddI~ddi~CAkkI~~e~-----~G~~aW~~w~~~C~g~-~Ls~~~  124 (125)
T d1juga_          80 CSKLLDDDITDDLKCAKKIAGEA-----KGLTPWVAWKSKCRGH-DLSKFK  124 (125)
T ss_dssp             GGGGSSSCCHHHHHHHHHHHHHH-----TSSTTCHHHHHHTTTS-CCGGGC
T ss_pred             HHHHcCCCcHHHHHHHHHHHhcc-----CCcchhHHHHHHCCCC-Cccccc
Confidence            99999999999999999999986     7999999999 99996 999994

>d2vb1a1 d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=1.1e-48  Score=362.69  Aligned_cols=123  Identities=37%  Similarity=0.716  Sum_probs=113.3

Q ss_pred             eeecchHHHHHHHHhcCCCC---CCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--cccccc
Q psy9686         279 KRFGACELAKFLVRQRGIAR---RDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHA  353 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~---~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~  353 (769)
                      |||+||||||+|++ .|||+   ++|++|||||+|||+|||+|+++ |.|||+||||||||++|||+++.++  +|.|+|
T Consensus         1 Ki~~rCeLAr~L~~-~g~~~~~g~~l~~WvCla~~ES~~nT~a~~~-n~~gs~dyGiFQIn~~~WC~~~~~~~~~N~C~i   78 (129)
T d2vb1a1           1 KVFGRCELAAAMKR-HGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQINSRWWCNDGRTPGSRNLCNI   78 (129)
T ss_dssp             CBCCHHHHHHHHHH-TTCTTBTTBCHHHHHHHHHHHHTTBTTCEEE-CTTSCEEETTTTEETTTTCBCSSCTTCCCTTCS
T ss_pred             CcccHhHHHHHHHH-cCCCccccccHHHHHHHHHHhccCcCccccc-CCCCCCccceeeecccccccCCCCCCCCCcCCC
Confidence            79999999999998 67776   55999999999999999999996 6799999999999999999987654  589999


Q ss_pred             ccccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCc
Q psy9686         354 KCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDM  409 (769)
Q Consensus       354 ~C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~  409 (769)
                      +|++||||||+|||+|||+|++++     +||+||++|+ +|+|+ +|++|...|++
T Consensus        79 ~C~~Ll~ddI~ddi~CAkkI~~~~-----~G~~aW~~w~~~C~g~-~l~~~v~gC~l  129 (129)
T d2vb1a1          79 PCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKGT-DVQAWIRGCRL  129 (129)
T ss_dssp             BGGGGGCSSCHHHHHHHHHHHHTT-----CCGGGCHHHHHHTTTS-CGGGGTTTCCC
T ss_pred             CHHHHcCCCcHHHHHHHHHHHhcc-----cCcchhHHHHHHcCCC-ChHHHHhcCCC
Confidence            999999999999999999999985     7999999999 99996 99999877763

>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId: 9615]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Dog (Canis familiaris), milk [TaxId: 9615]

Probab=100.00  E-value=1e-47  Score=358.54  Aligned_cols=125  Identities=38%  Similarity=0.771  Sum_probs=116.7

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC-Ccccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP-AGKECHAKC  355 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~-~~~~C~~~C  355 (769)
                      |||+|||||++|++.  +|||+++|++|||||++||+|||+|++++|.|||++|||||||++|||.++++ ++|.|+|+|
T Consensus         2 ki~~rCeLAr~L~~~g~~gf~~~~L~~wvCla~~ES~~nT~a~~~~~~dgs~~yGiFQIn~~~WC~~~~~~~~n~C~i~C   81 (130)
T d1qqya_           2 KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMC   81 (130)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHTTBTTCEESSCSSSCCEETTTTEETTTTCBBTTBCCCCTTCSBG
T ss_pred             ccccHhHHHHHHHHhccCCCcHHHHHHHHHHHHHHhCCCcccccCCCCCCCcccceeeecchhhhcCCCCCCCCccCCch
Confidence            899999999999984  36899999999999999999999999988999999999999999999997764 479999999


Q ss_pred             ccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCc
Q psy9686         356 SSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDM  409 (769)
Q Consensus       356 ~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~  409 (769)
                      ++||||||+|||+|||+|++++     +||+||++|+ +|+|+ +|++|...|++
T Consensus        82 ~~Ll~ddI~ddi~CAkkI~~~~-----~G~~aW~~w~~~C~g~-~l~~~~~~C~l  130 (130)
T d1qqya_          82 SKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAWVKHCKGK-DLSKYLASCNL  130 (130)
T ss_dssp             GGGGSSCCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTTS-CCTTTTTTSCC
T ss_pred             HHHhCcccHHHHHHHHHHHHhc-----cCccccHHHHHHCCCC-CchHHhhcCCC
Confidence            9999999999999999999986     7999999999 99996 99999877764

>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-47  Score=352.11  Aligned_cols=116  Identities=29%  Similarity=0.633  Sum_probs=108.9

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Cccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~C~  356 (769)
                      |+|+|||||++|++.+|||+++|+||||||+|||+|||+|+++  .|||+|||||||||+|||+++++  ++|.|+|+|+
T Consensus         1 K~~~rCeLA~~L~~~~g~~~~~l~~WvCla~~ES~~nT~a~~~--~dgS~dYGiFQIn~~~WC~~~~~~~~~n~C~i~C~   78 (123)
T d1b9oa_           1 KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVE--NDESTEYGLFQISNKLWCKSSQVPQSRNICDISCD   78 (123)
T ss_dssp             CBCCHHHHHHHTGGGTTGGGCCHHHHHHHHHHHHTTBTTCEEE--CSSCEEETTTTEETTTTSBCTTCTTCCCTTCSBGG
T ss_pred             CcCcHhHHHHHHHHhcCCChhHHHHHHHHHHHHhcCCccceeC--CCCCcccceEeeccccccCCCCCCCCCCCCCCcHH
Confidence            7999999999999768999999999999999999999999985  38999999999999999998764  3689999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      +||||||+|||+|||+|+++      +||+||++|+ +|+|+  |++|.
T Consensus        79 ~Ll~ddI~ddi~CAk~I~~~------~G~~aW~~w~~~C~g~--l~~w~  119 (123)
T d1b9oa_          79 KFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCTEK--LEQWL  119 (123)
T ss_dssp             GGGSSCCHHHHHHHHHHHHH------TTTHHHHTTCCTTCSC--GGGGS
T ss_pred             HHcCCCcHHHHHHHHHHHHH------cCchHHHHHHHHcccc--hHHHH
Confidence            99999999999999999998      5999999999 99995  99995

>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-47  Score=355.25  Aligned_cols=125  Identities=35%  Similarity=0.721  Sum_probs=116.3

Q ss_pred             eeecchHHHHHHHHh--cCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCC--ccccccc
Q psy9686         279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPA--GKECHAK  354 (769)
Q Consensus       279 k~~~rCela~~l~~~--~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~--~~~C~~~  354 (769)
                      |||+|||||++|++.  +||++++|++|||||++||+|||+|+++++.|||+||||||||++|||.++..+  +|.|+|+
T Consensus         1 ki~~rCeLA~~L~~~g~~gf~~~~L~~wvCia~~ES~~nt~a~n~~~~dgs~~YGlFQIn~~~WC~~~~~~~~~n~C~i~   80 (130)
T d2nwdx1           1 KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLS   80 (130)
T ss_dssp             CBCCHHHHHHHHHHTTCTTBTTBCHHHHHHHHHHHHSSBTTCEEEETTTTEEEETTTTEETTTTSBCSCSTTCCCTTCSB
T ss_pred             CcccHhHHHHHHHHhCCCCCChhhhhhhhhhhhHhhCCCCcCccCCCCCCccccceeeecccccccCCCCCCccccCCCc
Confidence            799999999999984  467999999999999999999999999878899999999999999999987653  5899999


Q ss_pred             cccccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccCCc
Q psy9686         355 CSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHADDM  409 (769)
Q Consensus       355 C~~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~~~  409 (769)
                      |++||||||+|||+|||+|++++     +||+||++|+ +|+|+ +|++|...|++
T Consensus        81 C~~Ll~ddI~d~i~CAk~I~~~~-----~G~~aW~~w~~~C~g~-~l~~~~~~C~l  130 (130)
T d2nwdx1          81 CSALLQDNIADAVACAKRVVRDP-----QGIRAWVAWRNRCQNR-DVRQYVQGCGV  130 (130)
T ss_dssp             GGGGGSSSCHHHHHHHHHHHHST-----TGGGGSHHHHHHTTTS-CCGGGTTTSCC
T ss_pred             cHHHcCCchHHHHHHHHHHHHhh-----cCcchhHHHHHHcCCC-ChHHHhhcCCC
Confidence            99999999999999999999986     7999999999 99996 99999888764

>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Silkworm (Bombyx mori) [TaxId: 7091]

Probab=100.00  E-value=1.1e-46  Score=346.19  Aligned_cols=115  Identities=36%  Similarity=0.800  Sum_probs=108.7

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCCccccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSF  358 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~~~~C~~~C~~l  358 (769)
                      |||+|||||++|++ +|||+++|++|||||++||+|||+|+++ |.|||+||||||||++|||+++..+++.|+|+|++|
T Consensus         1 K~~~rCeLa~~L~~-~G~~~~~l~~WvCia~~ES~~nT~a~~~-n~~gs~dyGlFQIn~~~WC~~g~~~~~~C~i~C~~L   78 (119)
T d1gd6a_           1 KTFTRCGLVHELRK-HGFEENLMRNWVCLVEHESSRDTSKTNT-NRNGSKDYGLFQINDRYWCSKGASPGKDCNVKCSDL   78 (119)
T ss_dssp             CBCCHHHHHHHHHH-TTCCGGGHHHHHHHHHHHTTTBTTCEEE-CTTSCEEETTTTEETTTTCBSSSSCBTTTTBBGGGG
T ss_pred             CcccHHHHHHHHHH-cCCCHHHHHHHHHHHHHhcCCCcccccc-CCCCCcccceeeecccccccCCCCCCCCCCCCHHHH
Confidence            79999999999997 7999999999999999999999999996 689999999999999999998777788999999999


Q ss_pred             cCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccc
Q psy9686         359 EDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTY  403 (769)
Q Consensus       359 l~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~  403 (769)
                      |+|||+|||+|||+|+++|      ||+||++|+ +|+|+  |+.+
T Consensus        79 l~ddI~ddi~CAk~I~~~~------G~~aW~~w~~~C~g~--lp~i  116 (119)
T d1gd6a_          79 LTDDITKAAKCAKKIYKRH------RFDAWYGWKNHCQGS--LPDI  116 (119)
T ss_dssp             SSSCCHHHHHHHHHHHHHH------GGGGCHHHHTTSSSC--CCCC
T ss_pred             cCCChHHHHHHHHHHHHHc------CcchhHHHHHhCCCC--CCCC
Confidence            9999999999999999994      999999999 99994  6665

>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=100.00  E-value=7.3e-45  Score=336.13  Aligned_cols=119  Identities=28%  Similarity=0.590  Sum_probs=109.6

Q ss_pred             eeecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Cccccccccc
Q psy9686         279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAKCS  356 (769)
Q Consensus       279 k~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~C~  356 (769)
                      |+|+|||||++|++.+||++.+|++|||||++||+|||+|+++  .++|+||||||||++|||+++..  ++|.|+|+|+
T Consensus         1 K~~~rCelA~~L~~~~g~~~~~L~~wvCia~~ES~~nt~a~~~--~~~s~~yGlFQIN~~~WC~~~~~~~~~n~C~i~C~   78 (123)
T d1hfxa_           1 KQLTKCALSHELNDLAGYRDITLPEWLCIIFHISGYDTQAIVK--NSDHKEYGLFQINDKDFCESSTTVQSRNICDISCD   78 (123)
T ss_dssp             CBCCHHHHHHHTTTTTTGGGCCHHHHHHHHHHHHTTBTTCEEE--ETTEEEETTTTEETTTTCBCSSSCCCCCTTCCBGG
T ss_pred             CcCcHhHHHHHHHHhCCCCcchHHHHHHHHHHHhCCCCcCccC--CCCCccccccccccccccCCCCCCCCCCcCCCccH
Confidence            7999999999998768999999999999999999999999985  35788999999999999998764  4799999999


Q ss_pred             cccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCccccccC
Q psy9686         357 SFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYDHAD  407 (769)
Q Consensus       357 ~ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~~~~  407 (769)
                      +||||||+|||+|||+|+++      +||+||++|+ +|+|+  |++|...|
T Consensus        79 ~Ll~ddI~d~i~CAkkI~~~------~G~~AW~~w~~~C~g~--l~~w~~~c  122 (123)
T d1hfxa_          79 KLLDDDLTDDIMCVKKILDI------KGIDYWLAHKPLCSDK--LEQWYCEA  122 (123)
T ss_dssp             GGSSSCCHHHHHHHHHHHHH------TCTHHHHTTCCTTCSC--GGGGCSSC
T ss_pred             HHcCCCcHHHHHHHHHHHHH------cCchhhHHhhhhcccc--HHHHHhCc
Confidence            99999999999999999998      6999999999 99995  99997544

>d1yroa1 d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-44  Score=331.43  Aligned_cols=115  Identities=27%  Similarity=0.673  Sum_probs=107.7

Q ss_pred             eecchHHHHHHHHhcCCCCCCcccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCC--Ccccccccccc
Q psy9686         280 RFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGP--AGKECHAKCSS  357 (769)
Q Consensus       280 ~~~rCela~~l~~~~g~~~~~l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~--~~~~C~~~C~~  357 (769)
                      .|+||||||+|++.+||++++|++|||||++||+|||+|++  |.|||+||||||||++|||.+++.  ++|.|+|+|++
T Consensus         2 ~~~rCela~~L~~~~gf~~~~L~~wvCla~~ES~~nt~a~~--~~~gs~dyGlFQIn~~~WC~~~~~~~~~n~C~i~C~~   79 (123)
T d1yroa1           2 ELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVV--NDNGSTEYGLFQISDRFWCKSSEFPESENICGISCDK   79 (123)
T ss_dssp             BCCHHHHHHHTGGGTTGGGCCHHHHHHHHHHHHTTBTTCEE--EETTEEEETTTTEETTTTSBCSSCTTCCCTTCSBGGG
T ss_pred             CccHhHHHHHHHHhcCCCcchHHHHHHHHHHHhCCCCcCee--CCCCCccccceeecccccCCCCCCCCccCcCCCchHH
Confidence            58999999999976899999999999999999999999997  468999999999999999998764  47999999999


Q ss_pred             ccCCChhHHHHHHHHHHhcccccccCcccccccCc-cccCCCCCcccc
Q psy9686         358 FEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKVSTYD  404 (769)
Q Consensus       358 ll~~di~~~i~Cak~i~~~~~~~~~~G~~aW~~w~-~C~g~~~l~~~~  404 (769)
                      ||||||+|||+|||+|+++      +||+||++|+ +|+|+  |++|.
T Consensus        80 Ll~ddI~ddi~CAkkI~~~------~G~~aW~~w~~~C~g~--l~~w~  119 (123)
T d1yroa1          80 LLDDELDDDIACAKKILAI------KGIDYWKAYKPMCSEK--LEQWR  119 (123)
T ss_dssp             GSSSCCHHHHHHHHHHHHH------TCGGGSTTHHHHSSSC--CGGGC
T ss_pred             HcCCCcHHHHHHHHHHHHH------cCcchhHHHHHHcccc--HHHhc
Confidence            9999999999999999997      6999999999 99994  99995

>d2vb1a1 d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=2.9e-31  Score=245.45  Aligned_cols=81  Identities=32%  Similarity=0.695  Sum_probs=75.2

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+|||||||||+|||+++.++  +|.|+|+|++||||||+|||+|||+|++++     +||+||++|+ +|+| +
T Consensus        45 ~n~~gs~dyGiFQIn~~~WC~~~~~~~~~N~C~i~C~~Ll~ddI~ddi~CAkkI~~~~-----~G~~aW~~w~~~C~g-~  118 (129)
T d2vb1a1          45 RNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-----NGMNAWVAWRNRCKG-T  118 (129)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSBGGGGGCSSCHHHHHHHHHHHHTT-----CCGGGCHHHHHHTTT-S
T ss_pred             cCCCCCCccceeeecccccccCCCCCCCCCcCCCCHHHHcCCCcHHHHHHHHHHHhcc-----cCcchhHHHHHHcCC-C
Confidence            58999999999999999999988754  489999999999999999999999999986     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||+||.
T Consensus       119 ~l~~~v~gC~  128 (129)
T d2vb1a1         119 DVQAWIRGCR  128 (129)
T ss_dssp             CGGGGTTTCC
T ss_pred             ChHHHHhcCC
Confidence            9999999885

>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]

Probab=99.96  E-value=8.3e-31  Score=242.36  Aligned_cols=81  Identities=28%  Similarity=0.691  Sum_probs=74.8

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+|||||||||+|||++++++  +|+|+|+|++||||||+|||+|||||+.++     +||+||++|+ +|+| +
T Consensus        45 ~n~~gS~dyGiFQIn~~~WC~~~~~~~~~N~C~i~C~~Ll~ddI~ddi~CAkkIv~~~-----~G~~AW~~w~~~C~g-~  118 (129)
T d1lmqa_          45 RNTDGSTDYGIFQINSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDP-----NGIGAWVAWRLHCQN-Q  118 (129)
T ss_dssp             ECTTSCEEETTTTEETTTSCBCSCCTTCCCTTCSBGGGGSSSSCHHHHHHHHHHTTST-----TGGGGCHHHHHHTTT-S
T ss_pred             cCCCCCCCcceeeecchhcccCCCCCCCCCCCCCcHHHHcCCCcHHHHHHHHHHHhcc-----cCcchhHHHHHHcCC-C
Confidence            47899999999999999999988754  589999999999999999999999999887     4999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|.
T Consensus       119 ~L~~~i~~C~  128 (129)
T d1lmqa_         119 DLRSYVAGCG  128 (129)
T ss_dssp             CCGGGTTTSC
T ss_pred             ChHHHHhcCC
Confidence            9999998884

>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]

Probab=99.95  E-value=7.5e-30  Score=234.19  Aligned_cols=77  Identities=34%  Similarity=0.799  Sum_probs=71.4

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .|+|||+|||||||||+|||++++.+  +|+|+|+|++||||||+|||+|||+|++++|     ||+||++|+ +|+| +
T Consensus        45 ~n~~GS~dyGiFQIns~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~ddi~CAkkI~~e~~-----G~~aW~~w~~~C~g-~  118 (125)
T d1juga_          45 HNTDGSTDYGILQINSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK-----GLTPWVAWKSKCRG-H  118 (125)
T ss_dssp             ECTTSCEEETTTTEETTTTCBCSSCTTCCCTTCSBGGGGSSSCCHHHHHHHHHHHHHHT-----SSTTCHHHHHHTTT-S
T ss_pred             cCCCCCcccCeEEecchhhccCCCCCCCcCCCCCcHHHHcCCCcHHHHHHHHHHHhccC-----CcchhHHHHHHCCC-C
Confidence            48899999999999999999988754  4899999999999999999999999999874     999999999 9997 7


Q ss_pred             Cccccc
Q psy9686          88 KVSTYY   93 (769)
Q Consensus        88 ~~~~~~   93 (769)
                      +|++|.
T Consensus       119 ~Ls~~~  124 (125)
T d1juga_         119 DLSKFK  124 (125)
T ss_dssp             CCGGGC
T ss_pred             Cccccc
Confidence            999985

>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId: 9615]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Dog (Canis familiaris), milk [TaxId: 9615]

Probab=99.95  E-value=1.2e-29  Score=235.92  Aligned_cols=81  Identities=37%  Similarity=0.826  Sum_probs=74.9

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCC-CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSK   88 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~-~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~   88 (769)
                      .++|||++||||||||+|||.++++ ++|.|+|+|++||||||+|||+|||+|++++     +||+||++|+ +|+| ++
T Consensus        47 ~~~dgs~~yGiFQIn~~~WC~~~~~~~~n~C~i~C~~Ll~ddI~ddi~CAkkI~~~~-----~G~~aW~~w~~~C~g-~~  120 (130)
T d1qqya_          47 RNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDP-----NGMSAWVAWVKHCKG-KD  120 (130)
T ss_dssp             SCSSSCCEETTTTEETTTTCBBTTBCCCCTTCSBGGGGGSSCCHHHHHHHHHHTTST-----TGGGGSHHHHHHTTT-SC
T ss_pred             CCCCCCcccceeeecchhhhcCCCCCCCCccCCchHHHhCcccHHHHHHHHHHHHhc-----cCccccHHHHHHCCC-CC
Confidence            4789999999999999999998764 4699999999999999999999999999987     4999999999 9997 79


Q ss_pred             cccccccCc
Q psy9686          89 VSTYYSSSF   97 (769)
Q Consensus        89 ~~~~~~~~~   97 (769)
                      |++||++|.
T Consensus       121 l~~~~~~C~  129 (130)
T d1qqya_         121 LSKYLASCN  129 (130)
T ss_dssp             CTTTTTTSC
T ss_pred             chHHhhcCC
Confidence            999998885

>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-29  Score=233.15  Aligned_cols=81  Identities=35%  Similarity=0.724  Sum_probs=74.6

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCC--cCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCC
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPA--GKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNS   87 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~--~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~   87 (769)
                      .+.|||++|||||||++|||.++..+  +|.|+|+|++||+|||+|||+|||+|++++|     ||+||++|+ +|+| +
T Consensus        46 ~~~dgs~~YGlFQIn~~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~d~i~CAk~I~~~~~-----G~~aW~~w~~~C~g-~  119 (130)
T d2nwdx1          46 NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNRCQN-R  119 (130)
T ss_dssp             ETTTTEEEETTTTEETTTTSBCSCSTTCCCTTCSBGGGGGSSSCHHHHHHHHHHHHSTT-----GGGGSHHHHHHTTT-S
T ss_pred             CCCCCccccceeeecccccccCCCCCCccccCCCccHHHcCCchHHHHHHHHHHHHhhc-----CcchhHHHHHHcCC-C
Confidence            36799999999999999999987643  5899999999999999999999999999874     999999999 9997 7


Q ss_pred             CcccccccCc
Q psy9686          88 KVSTYYSSSF   97 (769)
Q Consensus        88 ~~~~~~~~~~   97 (769)
                      +|++||++|+
T Consensus       120 ~l~~~~~~C~  129 (130)
T d2nwdx1         120 DVRQYVQGCG  129 (130)
T ss_dssp             CCGGGTTTSC
T ss_pred             ChHHHhhcCC
Confidence            9999998885

>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.5e-29  Score=228.32  Aligned_cols=79  Identities=32%  Similarity=0.712  Sum_probs=72.5

Q ss_pred             ccceecCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cc
Q psy9686           7 TRPCLDCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YC   83 (769)
Q Consensus         7 ~~~~~~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C   83 (769)
                      |.++.+.|||+|||||||||+|||++++.  ++|.|+|+|++||||||+|||+|||+|+++|      ||+||++|+ +|
T Consensus        38 T~a~~~~dgS~dYGiFQIn~~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~ddi~CAk~I~~~~------G~~aW~~w~~~C  111 (123)
T d1b9oa_          38 TQAIVENDESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIK------GIDYWLAHKALC  111 (123)
T ss_dssp             TTCEEECSSCEEETTTTEETTTTSBCTTCTTCCCTTCSBGGGGGSSCCHHHHHHHHHHHHHT------TTHHHHTTCCTT
T ss_pred             ccceeCCCCCcccceEeeccccccCCCCCCCCCCCCCCcHHHHcCCCcHHHHHHHHHHHHHc------CchHHHHHHHHc
Confidence            56677789999999999999999998764  4699999999999999999999999999874      999999999 99


Q ss_pred             cCCCCccccc
Q psy9686          84 NTNSKVSTYY   93 (769)
Q Consensus        84 ~~~~~~~~~~   93 (769)
                      +|  +|++||
T Consensus       112 ~g--~l~~w~  119 (123)
T d1b9oa_         112 TE--KLEQWL  119 (123)
T ss_dssp             CS--CGGGGS
T ss_pred             cc--chHHHH
Confidence            97  599998

>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: Lysozyme
species: Silkworm (Bombyx mori) [TaxId: 7091]

Probab=99.94  E-value=3e-28  Score=223.07  Aligned_cols=77  Identities=38%  Similarity=0.833  Sum_probs=69.9

Q ss_pred             ecCCCCccceEeeeCCcccCCCCCCCcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cccCCCCc
Q psy9686          11 LDCRGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YCNTNSKV   89 (769)
Q Consensus        11 ~~~~gs~~yGiFQIn~~~wC~~~~~~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C~~~~~~   89 (769)
                      .|.|||+|||||||||+|||+++..+++.|+|+|++||+|||+|||+|||+|+++|      ||+||++|+ +|+|  +|
T Consensus        42 ~n~~gs~dyGlFQIn~~~WC~~g~~~~~~C~i~C~~Ll~ddI~ddi~CAk~I~~~~------G~~aW~~w~~~C~g--~l  113 (119)
T d1gd6a_          42 TNRNGSKDYGLFQINDRYWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKRH------RFDAWYGWKNHCQG--SL  113 (119)
T ss_dssp             ECTTSCEEETTTTEETTTTCBSSSSCBTTTTBBGGGGSSSCCHHHHHHHHHHHHHH------GGGGCHHHHTTSSS--CC
T ss_pred             cCCCCCcccceeeecccccccCCCCCCCCCCCCHHHHcCCChHHHHHHHHHHHHHc------CcchhHHHHHhCCC--CC
Confidence            47899999999999999999988777899999999999999999999999999985      999999999 9998  56


Q ss_pred             ccccccC
Q psy9686          90 STYYSSS   96 (769)
Q Consensus        90 ~~~~~~~   96 (769)
                      .. |++|
T Consensus       114 p~-i~~C  119 (119)
T d1gd6a_         114 PD-ISSC  119 (119)
T ss_dssp             CC-CTTC
T ss_pred             CC-CCCC
Confidence            55 5444

>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.93  E-value=1.3e-27  Score=220.22  Aligned_cols=83  Identities=30%  Similarity=0.669  Sum_probs=73.9

Q ss_pred             ccceecCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cc
Q psy9686           7 TRPCLDCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YC   83 (769)
Q Consensus         7 ~~~~~~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C   83 (769)
                      |.+.-..++|+||||||||++|||+++..  ++|.|+|+|++||||||+|||+|||+|+++      +||+||++|+ +|
T Consensus        38 t~a~~~~~~s~~yGlFQIN~~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~d~i~CAkkI~~~------~G~~AW~~w~~~C  111 (123)
T d1hfxa_          38 TQAIVKNSDHKEYGLFQINDKDFCESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDI------KGIDYWLAHKPLC  111 (123)
T ss_dssp             TTCEEEETTEEEETTTTEETTTTCBCSSSCCCCCTTCCBGGGGSSSCCHHHHHHHHHHHHH------TCTHHHHTTCCTT
T ss_pred             CcCccCCCCCccccccccccccccCCCCCCCCCCcCCCccHHHcCCCcHHHHHHHHHHHHH------cCchhhHHhhhhc
Confidence            44555567899999999999999998764  479999999999999999999999999987      4999999999 99


Q ss_pred             cCCCCcccccccCc
Q psy9686          84 NTNSKVSTYYSSSF   97 (769)
Q Consensus        84 ~~~~~~~~~~~~~~   97 (769)
                      +|  +|++|+++|.
T Consensus       112 ~g--~l~~w~~~c~  123 (123)
T d1hfxa_         112 SD--KLEQWYCEAQ  123 (123)
T ss_dssp             CS--CGGGGCSSCC
T ss_pred             cc--cHHHHHhCcC
Confidence            98  5999998873

>d1yroa1 d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: C-type lysozyme
domain: alpha-Lactalbumin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=2.3e-27  Score=218.10  Aligned_cols=79  Identities=32%  Similarity=0.778  Sum_probs=72.6

Q ss_pred             ccceecCCCCccceEeeeCCcccCCCCCC--CcCccccccchhccCChhHHHHHHHHHhhccccccCCcccccccCc-cc
Q psy9686           7 TRPCLDCRGSRDHGIFQINDKYWCTASGP--AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTYH-YC   83 (769)
Q Consensus         7 ~~~~~~~~gs~~yGiFQIn~~~wC~~~~~--~~~~C~~~C~~ll~~di~~~v~Ca~~i~~~~~~~~~~g~~aW~~w~-~C   83 (769)
                      |.+..|.|||+||||||||++|||.++..  ++|.|+|+|++||||||+|||+|||+|+++      +||+||++|+ +|
T Consensus        38 t~a~~~~~gs~dyGlFQIn~~~WC~~~~~~~~~n~C~i~C~~Ll~ddI~ddi~CAkkI~~~------~G~~aW~~w~~~C  111 (123)
T d1yroa1          38 TQAVVNDNGSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------KGIDYWKAYKPMC  111 (123)
T ss_dssp             TTCEEEETTEEEETTTTEETTTTSBCSSCTTCCCTTCSBGGGGSSSCCHHHHHHHHHHHHH------TCGGGSTTHHHHS
T ss_pred             CcCeeCCCCCccccceeecccccCCCCCCCCccCcCCCchHHHcCCCcHHHHHHHHHHHHH------cCcchhHHHHHHc
Confidence            55667899999999999999999998764  469999999999999999999999999997      4999999999 99


Q ss_pred             cCCCCccccc
Q psy9686          84 NTNSKVSTYY   93 (769)
Q Consensus        84 ~~~~~~~~~~   93 (769)
                      +|  +|++|+
T Consensus       112 ~g--~l~~w~  119 (123)
T d1yroa1         112 SE--KLEQWR  119 (123)
T ss_dssp             SS--CCGGGC
T ss_pred             cc--cHHHhc
Confidence            97  699998

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.6e-08  Score=73.75  Aligned_cols=37  Identities=30%  Similarity=0.715  Sum_probs=34.6

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |+|+|.++||.|+|+|++..++   |.|.|++||+|++|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~---y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINS---YECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTE---EEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCC---EEEECCCCCCCCCCC
Confidence            6799999999999999998876   999999999999994

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.56  E-value=1.1e-08  Score=73.86  Aligned_cols=37  Identities=27%  Similarity=0.655  Sum_probs=34.3

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |+|+|.++||.|+|+|++..++   |.|.|++||+|.+||
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~---y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQS---YICFCLPAFEGRNCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTE---EEEECCTTEESTTSC
T ss_pred             CcccCCCCCCCCCCEEECCCCC---eEEECCCCCcCCCCC
Confidence            5799999999999999998876   999999999999984

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.4e-08  Score=72.86  Aligned_cols=36  Identities=33%  Similarity=0.806  Sum_probs=33.9

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      ||+|.++||+|+|+|++..++   |.|.|++||+|.+|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~---y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGE---FQCICMPGYEGVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSC---EEEECCTTEESSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCC---EEEeCCCCCccCcCe
Confidence            689999999999999998887   999999999999994

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.3e-08  Score=72.64  Aligned_cols=37  Identities=30%  Similarity=0.793  Sum_probs=34.1

Q ss_pred             ccCCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         514 ALGGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       514 dideC~--s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |||||.  ++||.++|+|++++++   |.|.|++||+|.+|+
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~---y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGS---FECQCLQGYTGPRCE   40 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSS---EEEECCTTEESTTSC
T ss_pred             CCccccCCCCCCCCCcEeECCCCC---EEeECCCCCcCCCCc
Confidence            688996  6899999999999987   999999999999994

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=3.9e-08  Score=72.89  Aligned_cols=39  Identities=33%  Similarity=0.974  Sum_probs=35.0

Q ss_pred             CCccccC-CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         690 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       690 ~ideC~s-~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ++|+|.. ++||.++|+|+++.++  |+|.|++||+|++|+.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~--y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGS--FECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSS--EEEECCTTEESTTSCE
T ss_pred             CCccccCCCCCCCCCcEeECCCCC--EEeECCCCCcCCCCcC
Confidence            7889963 5899999999999987  9999999999999974

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.8e-08  Score=71.17  Aligned_cols=37  Identities=49%  Similarity=1.136  Sum_probs=33.6

Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      ||+|. ++||+|+|+|++..++  |+|.|++||+|.+||.
T Consensus         1 Id~C~-~~PC~n~g~C~~~~~~--y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           1 VNECV-SNPCQNDATCLDQIGE--FQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CCTTT-TCCCCSSCEEEECSSC--EEEECCTTEESSSSCE
T ss_pred             CcCCc-CCCCCCCCEEECCCCC--EEEeCCCCCccCcCee
Confidence            57896 8999999999998776  9999999999999984

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=7.8e-08  Score=70.08  Aligned_cols=37  Identities=35%  Similarity=0.785  Sum_probs=34.1

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      ++|+|. ++||.|+|+|++..++  |+|.|++||+|++||
T Consensus         2 d~d~C~-~~PC~ngg~C~~~~~~--y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           2 DGDQCE-SNPCLNGGSCKDDINS--YECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTT-TCCCCTTCEEEEETTE--EEEECCTTCCSTTSC
T ss_pred             ccccCC-CCCCCCCcEEEcCCCC--EEEECCCCCCCCCCC
Confidence            678996 8999999999998776  999999999999997

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=8.3e-08  Score=68.27  Aligned_cols=35  Identities=37%  Similarity=0.855  Sum_probs=32.6

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |+|.++||+|+|+|++..++   |.|.|++||+|.+||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~---y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINE---FQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSC---EEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCC---eEEECCCCCCCCCcC
Confidence            68999999999999998876   999999999999985

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.41  E-value=4.9e-08  Score=70.34  Aligned_cols=37  Identities=35%  Similarity=0.846  Sum_probs=33.7

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      |+|+|. ++||+|+|+|++..++  |+|.|++||+|++||
T Consensus         1 D~d~C~-~~PC~ngg~C~~~~~~--y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCA-SSPCQNGGSCKDQLQS--YICFCLPAFEGRNCE   37 (37)
T ss_dssp             TCCGGG-GCCCCTTCEEEEETTE--EEEECCTTEESTTSC
T ss_pred             CcccCC-CCCCCCCCEEECCCCC--eEEECCCCCcCCCCC
Confidence            578996 9999999999998766  999999999999996

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.1e-07  Score=70.07  Aligned_cols=38  Identities=26%  Similarity=0.512  Sum_probs=33.4

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVES  734 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~dide  734 (769)
                      ++||+|+|+|++.....+|+|.|++||+|.+||.++++
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~~~   40 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA   40 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCcCC
Confidence            78999999999875545699999999999999988765

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=8.3e-08  Score=69.92  Aligned_cols=35  Identities=37%  Similarity=0.863  Sum_probs=32.6

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |+|.++||+|+|+|++..++   |.|.|++||+|.+|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~---y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGE---YTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSS---CCEECCTTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCC---EEEECCCCCCcCcCe
Confidence            68999999999999998776   999999999999994

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.1e-07  Score=69.23  Aligned_cols=38  Identities=45%  Similarity=0.940  Sum_probs=33.3

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~di  732 (769)
                      |+|. ++||+|+|+|++..++  |+|.|++||+|++||.++
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~--y~C~C~~G~~G~~Cei~~   38 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGE--YTCTCLEGFEGKNCELFT   38 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSS--CCEECCTTEETTTTCEES
T ss_pred             CcCC-CCCCCCCcEEECCCCC--EEEECCCCCCcCcCeEcc
Confidence            5786 8999999999998766  999999999999998543

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.5e-07  Score=68.88  Aligned_cols=37  Identities=27%  Similarity=0.689  Sum_probs=34.0

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI  555 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi  555 (769)
                      +.|.++||.|+|+|++..++   |+|.|++||+|.+|+.+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~---y~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGN---YTCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSS---EEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCC---eEEeCCCCccCCCCCCC
Confidence            57999999999999998887   99999999999999764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3e-07  Score=65.30  Aligned_cols=35  Identities=29%  Similarity=0.782  Sum_probs=31.6

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      |+|. ++||+|+|+|++..++  |+|.|++||+|++||
T Consensus         1 d~C~-~~PC~ngg~C~~~~~~--y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECA-SSPCLHNGRCLDKINE--FQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTT-TCCSTTTCEEEECSSC--EEEECCTTEESSSSC
T ss_pred             CCCC-CCCCCCCcEEECCCCC--eEEECCCCCCCCCcC
Confidence            5785 8999999999998766  999999999999996

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.1e-07  Score=67.73  Aligned_cols=36  Identities=25%  Similarity=0.714  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         516 GGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++|.++||.|+|+|++..++   |+|.|++||+|.+|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~---~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINN---YTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTE---EEEEECTTEESTTSCE
T ss_pred             CcccCCcCCCCcEEECCCCC---EEEeCCCCCcCcCcCc
Confidence            57999999999999998876   9999999999999964

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.8e-07  Score=68.14  Aligned_cols=38  Identities=37%  Similarity=0.717  Sum_probs=33.2

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~di  732 (769)
                      +.|. ++||+|+|+|++..++  |+|.|++||+|++||.+|
T Consensus         2 ~~C~-~~pC~ngg~C~~~~~~--~~C~C~~g~~G~~Ce~~v   39 (39)
T d1g1ta2           2 AACT-NTSCSGHGECVETINN--YTCKCDPGFSGLKCEQIV   39 (39)
T ss_dssp             CCCC-TTGGGGSEEEEEETTE--EEEEECTTEESTTSCEEC
T ss_pred             Cccc-CCcCCCCcEEECCCCC--EEEeCCCCCcCcCcCccC
Confidence            4685 8999999999998776  999999999999998643

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.4e-06  Score=64.01  Aligned_cols=35  Identities=37%  Similarity=0.737  Sum_probs=29.9

Q ss_pred             CCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       518 C~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      |.++||.|+|+|++.... ..|+|.|++||+|.+|+
T Consensus         1 C~~nPC~ngG~C~~~~~~-~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYF-SDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             CSSCCSCTTCEEEEESSS-SCEEEECCTTCBSSSCC
T ss_pred             CcCCCCCCCCEEecCCCC-CCeEECCCCCCCCCCcC
Confidence            678999999999986432 35999999999999994

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.01  E-value=1.2e-06  Score=64.61  Aligned_cols=38  Identities=24%  Similarity=0.654  Sum_probs=32.0

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCCC-CCcCCCCcc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCPS-GGQGQSGLE  554 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~~-GftG~~Ced  554 (769)
                      +|+|.++||+|+|+|++...+  .|.|.|++ ||+|.+|+.
T Consensus         2 id~C~~nPC~ngG~C~~~~~~--~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLD--RYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTT--EEEEECTTSSEETTTTCE
T ss_pred             CccCcCCCCCCCCEeeeCCCC--CEEEECCCCCcCCcCcCc
Confidence            689999999999999975322  49999986 999999953

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=8.9e-07  Score=64.70  Aligned_cols=36  Identities=36%  Similarity=0.845  Sum_probs=32.1

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +.|. ++||.|+|+|++..++  |+|.|++||+|++||.
T Consensus         2 ~~C~-~~pC~ngg~C~~~~~~--y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           2 ASCQ-DMSCSKQGECLETIGN--YTCSCYPGFYGPECEY   37 (40)
T ss_dssp             CCCC-TTGGGGSEEEEECSSS--EEEEECTTEESTTSCE
T ss_pred             Cccc-CCcCCCCcEEECCCCC--eEEeCCCCccCCCCCC
Confidence            4675 8999999999998876  9999999999999974

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.2e-06  Score=66.53  Aligned_cols=40  Identities=28%  Similarity=0.610  Sum_probs=34.6

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVE  733 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~did  733 (769)
                      ..++|. ++||.| |+|++..++  |+|.|++||+|++|+.+|.
T Consensus         7 ~~~~C~-~~PC~n-G~C~~~~~~--y~C~C~~G~~G~~Ce~~I~   46 (48)
T d1autl1           7 LEHPCA-SLCCGH-GTCIDGIGS--FSCDCRSGWEGRFCQREVS   46 (48)
T ss_dssp             SCCSSS-STTTTS-EEECCCSSC--CCEEECTTEESTTSCEECC
T ss_pred             CCCccc-CCCCCC-CEEECCCCC--CeEeCCCCCcCCCcccccC
Confidence            456896 899998 699998876  9999999999999997764

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2e-06  Score=65.21  Aligned_cols=36  Identities=36%  Similarity=0.683  Sum_probs=32.5

Q ss_pred             ccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      ..++|.++||.| |+|++..++   |+|.|++||+|.+|+
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~---y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGS---FSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSC---CCEEECTTEESTTSC
T ss_pred             CCCcccCCCCCC-CEEECCCCC---CeEeCCCCCcCCCcc
Confidence            357999999998 899998877   999999999999994

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=2.8e-06  Score=62.35  Aligned_cols=36  Identities=28%  Similarity=0.808  Sum_probs=31.0

Q ss_pred             CCCCCCCCCCCcEEeeC-CCCccceEeeCC-CCCcCCCCcc
Q psy9686         516 GGCAGRPCRNNGTCTPV-SGGVVNFTCTCP-SGGQGQSGLE  554 (769)
Q Consensus       516 deC~s~PC~ngGtCvn~-~gs~~~y~C~C~-~GftG~~Ced  554 (769)
                      |+|.++||+|+|+|++. .+   .|+|.|+ +||+|.+|+.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~---~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFD---QYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETT---EEEEECTTSSEETTTTCE
T ss_pred             CcCcCCCCCCCCEEEECCCC---CEEEeCcCCCcCCcCcCc
Confidence            68999999999999975 34   4999997 6999999953

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=2.3e-06  Score=63.45  Aligned_cols=38  Identities=26%  Similarity=0.664  Sum_probs=32.9

Q ss_pred             ccccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCc--CCCC
Q psy9686         512 AAALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQ--GQSG  552 (769)
Q Consensus       512 c~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~Gft--G~~C  552 (769)
                      |+|||||...++..+++|+|++|+   |.|.|++||+  |..|
T Consensus         2 CvDidEC~~~~~~~~~~C~Nt~Gs---y~C~C~~Gy~~~g~~C   41 (43)
T d1emoa1           2 AVDMDECKEPDVCKHGQCINTDGS---YRCECPFGYILAGNEC   41 (43)
T ss_dssp             CCCCCSSSSTTSCSSSCCCCCSSC---CCCCCCTTEEESSSCE
T ss_pred             CcceeccCCcCCCCCCEeECCCCC---eEeECCCCcccCCCcc
Confidence            689999987777778999999998   9999999996  4445

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.75  E-value=5.6e-06  Score=60.96  Aligned_cols=38  Identities=29%  Similarity=0.769  Sum_probs=31.5

Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCC-CCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLK-GFEGPHREL  730 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~-GytG~~Ce~  730 (769)
                      +|+|. ++||+|+|+|++... ++|+|.|++ ||+|.+||.
T Consensus         2 id~C~-~nPC~ngG~C~~~~~-~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           2 VNPCC-YYPCQHQGICVRFGL-DRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCGGG-GCCCCTTCEEEEETT-TEEEEECTTSSEETTTTCE
T ss_pred             CccCc-CCCCCCCCEeeeCCC-CCEEEECCCCCcCCcCcCc
Confidence            67896 899999999987522 349999986 999999973

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.66  E-value=2.1e-05  Score=60.76  Aligned_cols=40  Identities=23%  Similarity=0.417  Sum_probs=32.5

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI  555 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi  555 (769)
                      ..+|.++||.|+|+|....+. ..|+|.|++||+|.+|+..
T Consensus         6 C~~c~~~~C~NgG~C~~~~~~-~~~~C~C~~gy~G~~Ce~~   45 (53)
T d3egfa_           6 CPSSYDGYCLNGGVCMHIESL-DSYTCNCVIGYSGDRCQTR   45 (53)
T ss_dssp             CCTTSSCCSCSSCEEEEESSS-SCEEEECCTTCCSSSSCCC
T ss_pred             CCCCCCCCCCCCcEeeccCCC-CCeEeECCCCCcCCCCccC
Confidence            356788999999999865432 3599999999999999754

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=1.3e-05  Score=58.71  Aligned_cols=37  Identities=35%  Similarity=0.751  Sum_probs=30.3

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecC-CCCCCCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCL-KGFEGPHREL  730 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~-~GytG~~Ce~  730 (769)
                      |+|. ++||+|+|+|++... ++|+|.|+ +||+|.+||.
T Consensus         2 d~C~-~~PC~ngG~C~~~~~-~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           2 NPCC-SNPCQNRGECMSTGF-DQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CTTT-TCCCCTTCEEEEEET-TEEEEECTTSSEETTTTCE
T ss_pred             CcCc-CCCCCCCCEEEECCC-CCEEEeCcCCCcCCcCcCc
Confidence            5785 899999999987521 24999996 6999999973

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.1e-05  Score=61.05  Aligned_cols=40  Identities=18%  Similarity=0.324  Sum_probs=32.8

Q ss_pred             cCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc
Q psy9686         515 LGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI  555 (769)
Q Consensus       515 ideC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi  555 (769)
                      .++|.++||.|+|+|...+.. ..|+|.|++||+|.+|+..
T Consensus         4 C~~c~~~~C~ngG~C~~~~~~-~~~~C~C~~gy~G~~Ce~~   43 (48)
T d1nqlb_           4 CPLSHDGYCLHDGVCMYIEAL-DKYACNCVVGYIGERCQYR   43 (48)
T ss_dssp             CCSTTCCEECTTCEEEEETTT-TEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCCCCCcEEeeeCCC-CCeEEeCCCCcccCCCCcC
Confidence            457888999999999875432 3599999999999999754

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=9.2e-06  Score=65.01  Aligned_cols=49  Identities=20%  Similarity=0.328  Sum_probs=36.9

Q ss_pred             CccccCCCCCCCCCEEecC---CCCCceEEecCCCCCCCCCCCCCCCCCCCCC
Q psy9686         691 SAACVTLNPCQNNATCVAS---PGDKQITCLCLKGFEGPHRELPVESVDEPPS  740 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt---~Gs~~y~C~C~~GytG~~Ce~dideC~~npC  740 (769)
                      .++|. .++|.|+|+|...   .+.++|.|.|++||+|.+|+..+..+...+.
T Consensus         6 c~ec~-~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~~~~~~~~~   57 (63)
T d1haea_           6 CAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE   57 (63)
T ss_dssp             CCHHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTTCT
T ss_pred             CCCCc-CCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCCCccccCCc
Confidence            45675 8999999999531   2223499999999999999987776665443

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=6.8e-06  Score=65.81  Aligned_cols=41  Identities=24%  Similarity=0.438  Sum_probs=31.9

Q ss_pred             ccCCCCCCCCCCCcEEeeCC--CCccceEeeCCCCCcCCCCcc
Q psy9686         514 ALGGCAGRPCRNNGTCTPVS--GGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       514 dideC~s~PC~ngGtCvn~~--gs~~~y~C~C~~GftG~~Ced  554 (769)
                      ++++|.++||.|+|+|....  .+...|.|.|++||+|.+|+.
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            46788999999999996321  111249999999999999964

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.8e-05  Score=58.51  Aligned_cols=39  Identities=18%  Similarity=0.474  Sum_probs=32.3

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcc
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~  687 (769)
                      +||||. ..++..+++|+|++|+  |.|.|++||+++|..|+
T Consensus         4 DidEC~-~~~~~~~~~C~Nt~Gs--y~C~C~~Gy~~~g~~C~   42 (43)
T d1emoa1           4 DMDECK-EPDVCKHGQCINTDGS--YRCECPFGYILAGNECV   42 (43)
T ss_dssp             CCCSSS-STTSCSSSCCCCCSSC--CCCCCCTTEEESSSCEE
T ss_pred             ceeccC-CcCCCCCCEeECCCCC--eEeECCCCcccCCCccc
Confidence            799997 4444456899999998  99999999998887775

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=3.5e-05  Score=59.47  Aligned_cols=37  Identities=22%  Similarity=0.480  Sum_probs=30.9

Q ss_pred             cccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         693 ACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       693 eC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +|. .++|.|+|+|+...+..+|+|.|++||+|.+||.
T Consensus         8 ~c~-~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           8 SSY-DGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             TTS-SCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCC-CCCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            453 6799999999865554569999999999999985

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=2.7e-05  Score=57.48  Aligned_cols=33  Identities=21%  Similarity=0.646  Sum_probs=27.0

Q ss_pred             cccCCCCCCCCCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         513 AALGGCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       513 ~dideC~s~PC~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      +|||||+..+...+++|+|++++   |.|.|++||.
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~---y~C~C~~Gy~   33 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGS---YICDCPPDFE   33 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTE---EEEECCTTCE
T ss_pred             CCccccCCCCcCcCCEeECCCCC---EEEecCCCCE
Confidence            47899965543356899999998   9999999995

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=3.3e-05  Score=58.33  Aligned_cols=37  Identities=16%  Similarity=0.418  Sum_probs=30.5

Q ss_pred             cccCCCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         693 ACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       693 eC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      +|. .++|.|+|+|+......+|+|.|++||+|.+||.
T Consensus         6 ~c~-~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           6 LSH-DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             STT-CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCC-CCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            453 6889999999875544569999999999999984

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=6.8e-05  Score=54.42  Aligned_cols=33  Identities=21%  Similarity=0.473  Sum_probs=30.1

Q ss_pred             CCCCCCCCeEeeCCCCCceEeecCCCCeecCCCcc
Q psy9686         653 LNPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQ  687 (769)
Q Consensus       653 ~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G~~C~  687 (769)
                      .+.|+.+++|+|++|+  |.|.|.+||+|+|..|.
T Consensus         6 ~~~C~~~A~C~Nt~Gs--y~C~C~~Gy~GdG~~C~   38 (40)
T d1gl4a2           6 RHQCSVHAECRDYATG--FCCRCVANYTGNGRQCV   38 (40)
T ss_dssp             GGGSCTTEEEEECSSC--EEEEECTTEEECSSSEE
T ss_pred             CCCCCCCCEeecCCCC--eEeECCCCCcCCCCEee
Confidence            4678899999999987  99999999999999987

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=7.3e-05  Score=55.37  Aligned_cols=35  Identities=26%  Similarity=0.684  Sum_probs=28.5

Q ss_pred             cccCCCCCC--CCCCCcEEeeCCCCccceEeeCCCCCcCCC
Q psy9686         513 AALGGCAGR--PCRNNGTCTPVSGGVVNFTCTCPSGGQGQS  551 (769)
Q Consensus       513 ~dideC~s~--PC~ngGtCvn~~gs~~~y~C~C~~GftG~~  551 (769)
                      +|||||...  +|. +++|+|++|+   |.|.|++||++..
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gs---y~C~C~~Gy~~~~   37 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGD---FECKCDEGYESGF   37 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTE---EEECCCSSEEECT
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCC---eEEeCCCCCccCC
Confidence            479999644  475 4799999998   9999999997653

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.0001  Score=53.33  Aligned_cols=32  Identities=22%  Similarity=0.526  Sum_probs=27.4

Q ss_pred             CCccccCCCCCCCCCEEecCCCCCceEEecCCCCCC
Q psy9686         690 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGFEG  725 (769)
Q Consensus       690 ~ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG  725 (769)
                      |+|||+..++|.+  .|+|++|+  |+|.|++||+.
T Consensus         1 DidEC~~~~~C~~--~C~N~~Gs--y~C~C~~Gy~l   32 (40)
T d1dx5i3           1 DIDECENGGFCSG--VCHNLPGT--FECICGPDSAL   32 (40)
T ss_dssp             ECCHHHHCSSCSS--EEEECSSS--EEEEECSSSSC
T ss_pred             CccccCCCcCccC--EeeCCCCC--eEeECCCCCee
Confidence            4788976678975  89999998  99999999974

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00013  Score=53.45  Aligned_cols=32  Identities=34%  Similarity=0.906  Sum_probs=26.3

Q ss_pred             ccCCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCcC
Q psy9686         514 ALGGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQG  549 (769)
Q Consensus       514 dideC~--s~PC~ngGtCvn~~gs~~~y~C~C~~GftG  549 (769)
                      |||||.  +.+|. +++|+|++++   |.|.|++||..
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gs---y~C~C~~Gy~l   34 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGS---YRCECPPGHQL   34 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTE---EEEESCTTSCC
T ss_pred             CccccCCCCCCCC-CCEeECCCCC---eEEeCCCCCeE
Confidence            578995  44575 5799999998   99999999974

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0002  Score=52.95  Aligned_cols=34  Identities=29%  Similarity=0.724  Sum_probs=28.1

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCeec
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTVS  682 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~  682 (769)
                      +||||.. ...|. +++|+|++|+  |+|.|++||.++
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gs--y~C~C~~Gy~~~   36 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGD--FECKCDEGYESG   36 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTE--EEECCCSSEEEC
T ss_pred             cccccCCCCCCCC-CCEeEcCCCC--eEEeCCCCCccC
Confidence            6899974 45576 4799999998  999999999864

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00021  Score=52.57  Aligned_cols=33  Identities=24%  Similarity=0.629  Sum_probs=27.2

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      |||||.. +..|.+ ++|+|++|+  |+|.|++||+.
T Consensus         2 DinEC~~~~~~c~~-~~C~Nt~Gs--y~C~C~~Gy~l   35 (43)
T d1uzka2           2 DIDECQELPGLCQG-GKCINTFGS--FQCRCPTGYYL   35 (43)
T ss_dssp             ECCHHHHCGGGGBT-SEEEECSSC--EEEECCTTCCB
T ss_pred             CcccccCCCCCcCC-CEEECCCCC--eEeECCCCCeE
Confidence            5899973 456754 699999998  99999999984

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00013  Score=53.75  Aligned_cols=33  Identities=30%  Similarity=0.794  Sum_probs=26.7

Q ss_pred             ccCCCC--CCCCCCCcEEeeCCCCccceEeeCCCCCcCC
Q psy9686         514 ALGGCA--GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ  550 (769)
Q Consensus       514 dideC~--s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~  550 (769)
                      |||||.  +.+|.+ ++|+|++|+   |.|.|++||...
T Consensus         2 DinEC~~~~~~c~~-~~C~Nt~Gs---y~C~C~~Gy~l~   36 (43)
T d1uzka2           2 DIDECQELPGLCQG-GKCINTFGS---FQCRCPTGYYLN   36 (43)
T ss_dssp             ECCHHHHCGGGGBT-SEEEECSSC---EEEECCTTCCBC
T ss_pred             CcccccCCCCCcCC-CEEECCCCC---eEeECCCCCeEC
Confidence            689995  445754 699999998   999999999643

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00024  Score=51.71  Aligned_cols=35  Identities=26%  Similarity=0.738  Sum_probs=27.1

Q ss_pred             cCCCC-CCCCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcc
Q psy9686         515 LGGCA-GRPCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLE  554 (769)
Q Consensus       515 ideC~-s~PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~Ced  554 (769)
                      ||||+ .++|.+  +|+|++++   |.|.|++||+    |++|++
T Consensus         1 idEC~~~~~C~~--~C~n~~Gs---y~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           1 IDECQDPDTCSQ--LCVNLEGG---YKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CCTTTTTTSCSS--CEECSSSC---CEECCCTTEEECTTTCCEEE
T ss_pred             CccCCCCCCCCC--EeECCCCC---EEeECCCCCeECCCCCcccc
Confidence            57884 446754  99999998   9999999996    455543

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00015  Score=52.50  Aligned_cols=34  Identities=21%  Similarity=0.608  Sum_probs=28.5

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCeecC
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTVSS  683 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg~G  683 (769)
                      |||||+..++|+  +.|+|++|+  |+|.|++||++.|
T Consensus         1 DidEC~~~~~C~--~~C~N~~Gs--y~C~C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECENGGFCS--GVCHNLPGT--FECICGPDSALAG   34 (40)
T ss_dssp             ECCHHHHCSSCS--SEEEECSSS--EEEEECSSSSCEE
T ss_pred             CccccCCCcCcc--CEeeCCCCC--eEeECCCCCeeCC
Confidence            478998667886  599999998  9999999998544

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00038  Score=51.07  Aligned_cols=33  Identities=24%  Similarity=0.669  Sum_probs=27.1

Q ss_pred             cccccccCCCCCCCCeEeeCCCCCceEeecCCCCee
Q psy9686         646 NSAACVTLNPCQNNATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       646 ~ideC~~~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      +||||+....|. .+.|+|++|+  |+|.|++||.+
T Consensus         2 DidEC~~~~~~c-~~~C~Nt~G~--y~C~C~~Gy~l   34 (43)
T d1uzka1           2 DVNECLDPTTCI-SGNCVNTPGS--YICDCPPDFEL   34 (43)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTE--EEEECCTTCEE
T ss_pred             CccccCCCCcCc-CCEeECCCCC--EEEecCCCCEE
Confidence            589998544453 4799999987  99999999985

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00026  Score=51.51  Aligned_cols=35  Identities=26%  Similarity=0.655  Sum_probs=28.5

Q ss_pred             CccccCCCCCCCCCEEecCCCCCceEEecCCCCC----CCCCC
Q psy9686         691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFE----GPHRE  729 (769)
Q Consensus       691 ideC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt----G~~Ce  729 (769)
                      +|||+..++|.+  .|+++.|+  |+|.|++||.    |..|+
T Consensus         1 idEC~~~~~C~~--~C~n~~Gs--y~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2           1 IDECQDPDTCSQ--LCVNLEGG--YKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             CCTTTTTTSCSS--CEECSSSC--CEECCCTTEEECTTTCCEE
T ss_pred             CccCCCCCCCCC--EeECCCCC--EEeECCCCCeECCCCCccc
Confidence            578876678876  79999998  9999999996    55553

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00039  Score=50.82  Aligned_cols=33  Identities=21%  Similarity=0.575  Sum_probs=27.0

Q ss_pred             ccccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee
Q psy9686         646 NSAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       646 ~ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      |||||.. +..|. ++.|+|++|+  |+|.|++||..
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gs--y~C~C~~Gy~l   34 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGS--YRCECPPGHQL   34 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTE--EEEESCTTSCC
T ss_pred             CccccCCCCCCCC-CCEeECCCCC--eEEeCCCCCeE
Confidence            4788973 55675 5799999998  99999999983

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0008  Score=51.47  Aligned_cols=40  Identities=23%  Similarity=0.453  Sum_probs=28.8

Q ss_pred             ccccccc-CCCC------CCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         646 NSAACVT-LNPC------QNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       646 ~ideC~~-~~pC------~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      |||||.. ...|      .-.+.|+|++|+  |+|.|++||++  +|.+|+
T Consensus         3 DidEC~~~~~~c~~~~~~~c~~~C~Nt~Gs--Y~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           3 DLDECASRSKSGEEDPQPQCQHLCHNYVGG--YFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEETTE--EEEECSTTCEECTTSSCEE
T ss_pred             ecccccCCCCCcccCCCCCccCEeEcCCCC--eEeECCCCCeECCCCCcee
Confidence            5788863 2223      223589999988  99999999984  566665

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00095  Score=51.05  Aligned_cols=33  Identities=30%  Similarity=0.715  Sum_probs=25.3

Q ss_pred             cccCCCCCC--CC------CCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         513 AALGGCAGR--PC------RNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       513 ~dideC~s~--PC------~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      +|||||...  .|      ....+|+|++|+   |.|.|++||+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~Gs---Y~C~C~~Gy~   42 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGG---YFCSCRPGYE   42 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTE---EEEECSTTCE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCC---eEeECCCCCe
Confidence            578899543  23      223489999998   9999999996

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0011  Score=49.04  Aligned_cols=31  Identities=29%  Similarity=0.675  Sum_probs=24.2

Q ss_pred             cCCCCCCC---CCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         515 LGGCAGRP---CRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       515 ideC~s~P---C~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      ||||+..+   +....+|+|++++   |+|.|++||.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gs---y~C~C~~Gy~   34 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGG---FYCSCRAGYV   34 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTE---EEEECCTTEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCC---eEEECCCCCe
Confidence            57886542   2345599999998   9999999995

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.27  E-value=0.00089  Score=49.54  Aligned_cols=31  Identities=23%  Similarity=0.553  Sum_probs=22.3

Q ss_pred             cCCCCCCC---CCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         515 LGGCAGRP---CRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       515 ideC~s~P---C~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      ||||+..+   +.....|+|++++   |.|.|++||.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gs---y~C~C~~Gy~   34 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGG---YYCSCRVGYI   34 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTE---EEEECCTTEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCC---EEEeCCCCCE
Confidence            57885432   2334599999998   9999999995

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.00073  Score=48.82  Aligned_cols=28  Identities=21%  Similarity=0.622  Sum_probs=24.4

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGP  726 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~  726 (769)
                      .+.|+.+++|++++|+  |.|.|++||+|.
T Consensus         6 ~~~C~~~A~C~Nt~Gs--y~C~C~~Gy~Gd   33 (40)
T d1gl4a2           6 RHQCSVHAECRDYATG--FCCRCVANYTGN   33 (40)
T ss_dssp             GGGSCTTEEEEECSSC--EEEEECTTEEEC
T ss_pred             CCCCCCCCEeecCCCC--eEeECCCCCcCC
Confidence            4568889999999988  999999999854

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.82  E-value=0.0023  Score=47.19  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=26.1

Q ss_pred             ccccccCC--CCCCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         647 SAACVTLN--PCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       647 ideC~~~~--pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      ||||+..+  .+.-.+.|+|++|+  |+|.|++||..  +|++|+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gs--y~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGG--YYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTE--EEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCC--EEEeCCCCCEECCCCCccc
Confidence            46776321  12224589999987  99999999974  566665

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0028  Score=47.84  Aligned_cols=36  Identities=17%  Similarity=0.241  Sum_probs=29.0

Q ss_pred             CCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccc
Q psy9686         519 AGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEIT  556 (769)
Q Consensus       519 ~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedid  556 (769)
                      ..+.|.||+.|.....+  .+.|.|+.||+|.+|+.++
T Consensus        12 ~~~yC~nGgcc~~~~~~--~~~C~C~~gy~G~rCe~~~   47 (50)
T d1ioxa_          12 YKHYCIKGRCRFVVAEQ--TPSCVCDEGYIGARCERVD   47 (50)
T ss_dssp             GTTSCTTCCEEEETTTT--EEEECCCTTEETTTTCEEC
T ss_pred             cCCCccCCeEEEeCCCC--CcEeECCCCCeeCCCccce
Confidence            45789999999654433  5999999999999997654

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0036  Score=46.10  Aligned_cols=39  Identities=18%  Similarity=0.417  Sum_probs=27.3

Q ss_pred             ccccccCC--CCCCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         647 SAACVTLN--PCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       647 ideC~~~~--pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      ||||....  .+.-.+.|+|++|+  |+|.|++||..  +|++|+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gs--y~C~C~~Gy~l~~d~~tC~   43 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGG--FYCSCRAGYVLHRNKRTCS   43 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTE--EEEECCTTEEECTTSSCEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCC--eEEECCCCCeECCCCCCcc
Confidence            46776321  11224689999988  99999999984  556665

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0031  Score=43.97  Aligned_cols=34  Identities=35%  Similarity=0.614  Sum_probs=26.0

Q ss_pred             CCCCCCEEecCCC-CCceEEecCCCCCCCCCCCCC
Q psy9686         699 PCQNNATCVASPG-DKQITCLCLKGFEGPHRELPV  732 (769)
Q Consensus       699 pC~ngg~Cvnt~G-s~~y~C~C~~GytG~~Ce~di  732 (769)
                      .|.|||+|+..-- ++-.+|.||.+|.|.+||.|.
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiDt   37 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK   37 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEecc
Confidence            4889999987421 122689999999999998654

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0052  Score=45.52  Aligned_cols=37  Identities=19%  Similarity=0.364  Sum_probs=27.1

Q ss_pred             CCCCCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCccc
Q psy9686         517 GCAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEI  555 (769)
Q Consensus       517 eC~s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedi  555 (769)
                      ++..++|.| |.|..... ...+.|.|++||+|.+|+.+
T Consensus         8 ~~~~~yC~n-G~C~~~~~-~~~~~C~C~~gY~G~RCe~~   44 (46)
T d1k36a_           8 SDMNGYCLH-GQCIYLVD-MSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             TTCCSSCSS-EEEEEETT-TTEEEEEECTTCSSTTSCCC
T ss_pred             CcCCCcCcC-CEEEEeCC-CCccEeECCCCceecCceee
Confidence            345679998 66754332 13599999999999999754

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0042  Score=46.06  Aligned_cols=33  Identities=24%  Similarity=0.429  Sum_probs=25.7

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHREL  730 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce~  730 (769)
                      .+.|.| |.|.......++.|.|++||+|.+|+.
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCcCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            468998 577644443469999999999999984

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.0075  Score=45.23  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=27.7

Q ss_pred             CCCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcccc
Q psy9686         520 GRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLEIT  556 (769)
Q Consensus       520 s~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Cedid  556 (769)
                      .+.|.|||.|......  .+.|.|++||+|.+|+.++
T Consensus        12 ~~yClnGgcc~~~~~~--~~~C~C~~gy~G~RCe~~~   46 (49)
T d1moxc_          12 TQFCFHGTCRFLVQED--KPACVCHSGYVGARCEHAD   46 (49)
T ss_dssp             SCSSTTEEEEEETTTT--EEEEEECTTEESTTSCEEC
T ss_pred             CCEeeCCeEEecCCCC--CcEeECCCCCEecCCcccc
Confidence            5679999988544332  5999999999999997654

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0085  Score=45.11  Aligned_cols=32  Identities=19%  Similarity=0.444  Sum_probs=26.2

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      .+.|.||+.|..... ..+.|.|++||+|.+||
T Consensus        13 ~~yC~nGgcc~~~~~-~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAE-QTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TTSCTTCCEEEETTT-TEEEECCCTTEETTTTC
T ss_pred             CCCccCCeEEEeCCC-CCcEeECCCCCeeCCCc
Confidence            467999998864433 35899999999999997

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0091  Score=43.31  Aligned_cols=28  Identities=32%  Similarity=0.931  Sum_probs=23.2

Q ss_pred             CCCCC---CCCCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         516 GGCAG---RPCRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       516 deC~s---~PC~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      |||+.   .+|.+  .|+|++++   |.|.|++||.
T Consensus         1 dEC~~~~~~~C~~--~C~n~~Gs---y~C~C~~Gy~   31 (42)
T d1nzia2           1 NECTDFVDVPCSH--FCNNFIGG---YFCSCPPEYF   31 (42)
T ss_dssp             CTTTC-CCCCSSS--EEEEETTE---EEEECCTTCE
T ss_pred             CCCCCCCCcCCCC--EeecCCCC---EEEeCCCCCE
Confidence            57752   46876  99999998   9999999996

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.01  Score=42.58  Aligned_cols=31  Identities=23%  Similarity=0.567  Sum_probs=24.5

Q ss_pred             cccccc-CCCCCCCCeEeeCCCCCceEeecCCCCee
Q psy9686         647 SAACVT-LNPCQNNATCVASPGDKQITCLCLKGGTV  681 (769)
Q Consensus       647 ideC~~-~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg  681 (769)
                      +|+|.. ...|++  .|++++++  |+|.|++||..
T Consensus         2 ~neC~~~nggC~h--~C~n~~g~--~~C~C~~Gy~L   33 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLKIG--YECLCPDGFQL   33 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECSSS--EEEECCTTCCE
T ss_pred             cccCCCCCCCCcC--EEEcCCCC--EEEECCCCCEE
Confidence            467863 345764  89999987  99999999974

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.015  Score=40.19  Aligned_cols=30  Identities=43%  Similarity=0.946  Sum_probs=25.7

Q ss_pred             ccccCCCCCCCCCEEecCCCCCceEEecCCCCC
Q psy9686         692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFE  724 (769)
Q Consensus       692 deC~s~~pC~ngg~Cvnt~Gs~~y~C~C~~Gyt  724 (769)
                      |+|+-.+||.|+ +|.+..|+  |.|.|..||.
T Consensus         2 dECsignpCGnG-TCtNviGg--Fec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGNG-TCKNVIGG--FECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSSS-CEEECSSS--EEECCSSSSC
T ss_pred             CccccCCccCCc-eeeecccc--eEEeecCCcC
Confidence            578657899875 89999987  9999999995

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.0098  Score=44.58  Aligned_cols=32  Identities=19%  Similarity=0.445  Sum_probs=25.4

Q ss_pred             CCCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         697 LNPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       697 ~~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      .+.|.||+.|..... ..+.|.|++||+|.+||
T Consensus        12 ~~yClnGgcc~~~~~-~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          12 TQFCFHGTCRFLVQE-DKPACVCHSGYVGARCE   43 (49)
T ss_dssp             SCSSTTEEEEEETTT-TEEEEEECTTEESTTSC
T ss_pred             CCEeeCCeEEecCCC-CCcEeECCCCCEecCCc
Confidence            467999887754332 45899999999999997

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.08  E-value=0.019  Score=41.59  Aligned_cols=36  Identities=22%  Similarity=0.491  Sum_probs=27.2

Q ss_pred             ccccc--CCCCCCCCeEeeCCCCCceEeecCCCCee--cCCCcc
Q psy9686         648 AACVT--LNPCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQ  687 (769)
Q Consensus       648 deC~~--~~pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~  687 (769)
                      |||+.  ..+|.+  .|++++|+  |+|.|++||..  +|++|.
T Consensus         1 dEC~~~~~~~C~~--~C~n~~Gs--y~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSH--FCNNFIGG--YFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSS--EEEEETTE--EEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCC--EeecCCCC--EEEeCCCCCEECCCCCeec
Confidence            46652  246864  89999987  99999999984  566665

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.016  Score=40.08  Aligned_cols=29  Identities=55%  Similarity=1.268  Sum_probs=24.6

Q ss_pred             CCCC-CCCCCCCcEEeeCCCCccceEeeCCCCCc
Q psy9686         516 GGCA-GRPCRNNGTCTPVSGGVVNFTCTCPSGGQ  548 (769)
Q Consensus       516 deC~-s~PC~ngGtCvn~~gs~~~y~C~C~~Gft  548 (769)
                      |||+ .+||.| |+|.|..++   |.|.|..||.
T Consensus         2 dECsignpCGn-GTCtNviGg---Fec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGG---FECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSS---EEECCSSSSC
T ss_pred             CccccCCccCC-ceeeecccc---eEEeecCCcC
Confidence            5674 578976 799999987   9999999995

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.014  Score=41.85  Aligned_cols=30  Identities=30%  Similarity=0.774  Sum_probs=24.4

Q ss_pred             cCCCCCC--CCCCCcEEeeCCCCccceEeeCCCCCcC
Q psy9686         515 LGGCAGR--PCRNNGTCTPVSGGVVNFTCTCPSGGQG  549 (769)
Q Consensus       515 ideC~s~--PC~ngGtCvn~~gs~~~y~C~C~~GftG  549 (769)
                      .|||..+  .|++  .|++++++   |+|.|++||..
T Consensus         2 ~neC~~~nggC~h--~C~n~~g~---~~C~C~~Gy~L   33 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLKIG---YECLCPDGFQL   33 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECSSS---EEEECCTTCCE
T ss_pred             cccCCCCCCCCcC--EEEcCCCC---EEEECCCCCEE
Confidence            4788654  4765  99999998   99999999963

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.60  E-value=0.049  Score=37.83  Aligned_cols=32  Identities=31%  Similarity=0.429  Sum_probs=24.1

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCcCCCCc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGL  553 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ce  553 (769)
                      .|.|+|+|+.-.-=.+-..|.||.+|.|..||
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            38999999964211123689999999999993

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.029  Score=40.30  Aligned_cols=31  Identities=19%  Similarity=0.565  Sum_probs=24.8

Q ss_pred             CCCCCCCEEecCCCCCceEEecCCCCCCCCCC
Q psy9686         698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRE  729 (769)
Q Consensus       698 ~pC~ngg~Cvnt~Gs~~y~C~C~~GytG~~Ce  729 (769)
                      +-|.| |+|.-....+.+.|.|.+||+|.+|+
T Consensus         8 ~yCih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           8 DFCIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             TCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CEeEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            45777 79976544455899999999999997

>d1xsfa1 d.2.1.8 (A:23-108) Probable resuscitation-promoting factor RpfB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: RPF-like
domain: Probable resuscitation-promoting factor RpfB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.23  E-value=0.013  Score=48.88  Aligned_cols=73  Identities=19%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             cccceEeeccccCCCcccccCCCCCCCceeeeeeeccccccCCCCCCccccccccccccCCChhHHHHHHHHHHhccccc
Q psy9686         301 VPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRA  380 (769)
Q Consensus       301 l~~wvCla~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~WC~~~~~~~~~C~~~C~~ll~~di~~~i~Cak~i~~~~~~~  380 (769)
                      -.+|--||+-||+-|-++.+     |+..||.||++-..|=..++..--.      .--+.-..+-|.=|++|+..    
T Consensus         6 ~~~W~~la~CESggn~~~nt-----gnG~YGg~QFs~~TW~~~GG~~ya~------~~~~As~~eQi~~A~~l~~~----   70 (86)
T d1xsfa1           6 GSIWDAIAGCEAGGNWAINT-----GNGYYGGVQFDQGTWEANGGLRYAP------RADLATREEQIAVAEVTRLR----   70 (86)
T ss_dssp             HHHHHHHHHHHTSSCTTCCC-----SSSBCTTTCCBHHHHHHTTGGGTCS------STTTSCHHHHHHHHHHHHHH----
T ss_pred             cchHHHHHHHhcCCCCcccC-----CCcccceeccCHHHHHHhCCccCCC------CcccCCHHHHHHHHHHHHHH----
Confidence            35788899999999998853     4458999999999996544321000      00112334567788899887    


Q ss_pred             ccCccccccc
Q psy9686         381 RGNGFQAWST  390 (769)
Q Consensus       381 ~~~G~~aW~~  390 (769)
                        +|+.+|++
T Consensus        71 --qG~~aWP~   78 (86)
T d1xsfa1          71 --QGWGAWPV   78 (86)
T ss_dssp             --HSSTTSCH
T ss_pred             --cCCCccch
Confidence              69999975

>d1gbsa_ d.2.1.5 (A:) Lysozyme {Australian black swan (Cygnus atratus) [TaxId: 8868]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: G-type lysozyme
domain: Lysozyme
species: Australian black swan (Cygnus atratus) [TaxId: 8868]

Probab=90.15  E-value=0.017  Score=54.85  Aligned_cols=49  Identities=14%  Similarity=0.250  Sum_probs=35.0

Q ss_pred             HHHHHHhcCCCCCCcccceE-eeccccCCCcccccCCCCCCCceeeeeeeccccc
Q psy9686         287 AKFLVRQRGIARRDVPTWVC-IATKESNRNSNARSPKNGNGSRDHGIFQINDKYW  340 (769)
Q Consensus       287 a~~l~~~~g~~~~~l~~wvC-la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~W  340 (769)
                      .++..+++|++-    .+|- |++.||+||+.|+++. .+++..+||+||....|
T Consensus        52 i~~aa~~~~v~~----~ll~ai~~~ES~f~~~a~s~~-g~~~~A~GLMQi~p~t~  101 (185)
T d1gbsa_          52 IKKVGEKLCVEP----AVIAGIISRESHAGKVLKNGW-GDRGNGFGLMQVDKRSH  101 (185)
T ss_dssp             HHHHHHHHTCCH----HHHHHHHHHHHGGGTTCBTTB-CTTSCEETTTTEETTTS
T ss_pred             HHHHHHHhCCcH----HHHHHHHHHhcCCCCCCcCCC-CCCCCCccccccCcchh
Confidence            333333456663    3333 8999999999999863 45667899999998665

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.62  E-value=0.061  Score=40.94  Aligned_cols=48  Identities=25%  Similarity=0.529  Sum_probs=32.0

Q ss_pred             CCCCCCEEecCCCCCceEE-ecCCCCCCCCCCCCCCCCCCCCC-CCCcee
Q psy9686         699 PCQNNATCVASPGDKQITC-LCLKGFEGPHRELPVESVDEPPS-EDETSV  746 (769)
Q Consensus       699 pC~ngg~Cvnt~Gs~~y~C-~C~~GytG~~Ce~dideC~~npC-~~GtC~  746 (769)
                      +|.++++|......+...| .|++||+|.+|+.-.+..-.+|. .+++|+
T Consensus         2 pC~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~P~~~~g~C~   51 (55)
T d1kloa1           2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVR   51 (55)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCE
T ss_pred             cCcCCCccceeCCCCCEEcCCCCCCCccCcccccCCccccCcccCCCcCc
Confidence            4666677765443344788 59999999999865555555666 345554

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.65  E-value=0.22  Score=36.98  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=22.7

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCc----CCCCccc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEI  555 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~Cedi  555 (769)
                      -|++  .|++++++   |+|.|++||+    |++|+.+
T Consensus         8 gC~~--~C~~~~g~---~~C~C~~Gy~L~~D~~tC~~~   40 (50)
T d1autl2           8 GCTH--YCLEEVGW---RRCSCAPGYKLGDDLLQCHPA   40 (50)
T ss_dssp             GCSS--EEEECSSS---EEEECCTTEEECTTSSCEEEC
T ss_pred             Cccc--EeecCCCC---eEEECCCCCEECCCCCccccC
Confidence            3654  89999987   9999999995    5667543

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.27  E-value=0.13  Score=36.87  Aligned_cols=32  Identities=25%  Similarity=0.522  Sum_probs=24.4

Q ss_pred             CCCCCCcEEeeCCCCccceEeeCCCCCcCCCCcc
Q psy9686         521 RPCRNNGTCTPVSGGVVNFTCTCPSGGQGQSGLE  554 (769)
Q Consensus       521 ~PC~ngGtCvn~~gs~~~y~C~C~~GftG~~Ced  554 (769)
                      +-|.+ |+|.-... .+.+.|.|+.||+|.+|+.
T Consensus         8 ~yCih-G~C~~i~~-l~~~~C~C~~gY~G~RCq~   39 (41)
T d1xdtr_           8 DFCIH-GECKYVKE-LRAPSCICHPGYHGERCHG   39 (41)
T ss_dssp             TCCSS-EEECCBGG-GTBCCEEECTTEESTTCCE
T ss_pred             CEeEC-cEEeecCc-CCCceeECCCCCeecCccc
Confidence            34887 99975443 2458999999999999964

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.21  E-value=0.37  Score=35.74  Aligned_cols=30  Identities=23%  Similarity=0.491  Sum_probs=24.3

Q ss_pred             CCCCCCeEeeCCCCCceEeecCCCCee--cCCCccc
Q psy9686         655 PCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQF  688 (769)
Q Consensus       655 pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~~  688 (769)
                      .|.  ..|++++++  |+|.|++||+.  ++++|+.
T Consensus         8 gC~--~~C~~~~g~--~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2           8 GCT--HYCLEEVGW--RRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             GCS--SEEEECSSS--EEEECCTTEEECTTSSCEEE
T ss_pred             Ccc--cEeecCCCC--eEEECCCCCEECCCCCcccc
Confidence            455  489999877  99999999986  6788873

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.98  E-value=0.22  Score=37.22  Aligned_cols=30  Identities=20%  Similarity=0.599  Sum_probs=23.6

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEIT  556 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~Cedid  556 (769)
                      -|++  .|++++++   |.|.|++||.    +++|+.++
T Consensus         9 gC~h--~C~n~~g~---~~C~C~~Gy~L~~D~~tC~~~~   42 (51)
T d2p3ua1           9 DCDQ--FCHEEQNS---VVCSCARGYTLADNGKACIPTG   42 (51)
T ss_dssp             GCSS--EEEEETTE---EEEECCTTEEECTTSSCEEESS
T ss_pred             Cccc--EeecCCCC---eEeEcCCCCEECCCCCccccCC
Confidence            3665  89999987   9999999996    66675543

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.84  E-value=0.15  Score=38.07  Aligned_cols=32  Identities=19%  Similarity=0.466  Sum_probs=24.4

Q ss_pred             CCCCCcEEeeCCCCccceEeeCCCCCc----CCCCcccccc
Q psy9686         522 PCRNNGTCTPVSGGVVNFTCTCPSGGQ----GQSGLEITPV  558 (769)
Q Consensus       522 PC~ngGtCvn~~gs~~~y~C~C~~Gft----G~~CedideC  558 (769)
                      .|.+  .|++++++   |.|.|++||.    +.+|++++++
T Consensus         7 gC~h--~C~~~~~~---~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           7 GCDQ--FCREERSE---VRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSSS--CCCEETTE---ECCCCCTTEEECTTSSCEEECSSS
T ss_pred             Cccc--EeEcCCCc---EEeEcCCCCEECCCCCccccCCcc
Confidence            4655  79998887   9999999995    6668665543

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.81  E-value=0.45  Score=35.41  Aligned_cols=30  Identities=23%  Similarity=0.657  Sum_probs=24.3

Q ss_pred             CCCCCCeEeeCCCCCceEeecCCCCee--cCCCccc
Q psy9686         655 PCQNNATCVASPGDKQITCLCLKGGTV--SSEYCQF  688 (769)
Q Consensus       655 pC~n~gtCvnt~Gs~~y~C~C~~Gftg--~G~~C~~  688 (769)
                      .|++  .|++++++  |+|.|++||..  ++++|+.
T Consensus         9 gC~h--~C~n~~g~--~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1           9 DCDQ--FCHEEQNS--VVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             GCSS--EEEEETTE--EEEECCTTEEECTTSSCEEE
T ss_pred             Cccc--EeecCCCC--eEeEcCCCCEECCCCCcccc
Confidence            4653  79999887  99999999985  6778873

>d1qsaa2 d.2.1.6 (A:451-618) 70 kDa soluble lytic transglycosylase, SLT70 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Bacterial muramidase, catalytic domain
domain: 70 kDa soluble lytic transglycosylase, SLT70
species: Escherichia coli [TaxId: 562]

Probab=81.44  E-value=0.061  Score=50.02  Aligned_cols=38  Identities=29%  Similarity=0.417  Sum_probs=28.6

Q ss_pred             cCCCCCCcccceE-eeccccCCCcccccCCCCCCCceeeeeeeccccc
Q psy9686         294 RGIARRDVPTWVC-IATKESNRNSNARSPKNGNGSRDHGIFQINDKYW  340 (769)
Q Consensus       294 ~g~~~~~l~~wvC-la~~eS~~~t~a~~~~~~~gs~~yGifQIn~~~W  340 (769)
                      +|+|-    ..+- |++.||+||..|+++     +..+||+||....|
T Consensus        14 ~gv~~----~ll~Ai~~~ES~f~p~a~S~-----~GA~GlmQi~p~ta   52 (168)
T d1qsaa2          14 KEIPQ----SYAMAIARQESAWNPKVKSP-----VGASGLMQIMPGTA   52 (168)
T ss_dssp             SSSCH----HHHHHHHHHHHTTCTTCBCT-----TCCBTTTTBCHHHH
T ss_pred             cCCCH----HHHHHHHHHhcCCCCCCCCC-----CCcccccccCcHHH
Confidence            45552    3344 889999999999974     34799999998655