254780351
MarR family transcriptional regulator
GeneID in NCBI database: | 8209336 | Locus tag: | CLIBASIA_01180 |
Protein GI in NCBI database: | 254780351 | Protein Accession: | YP_003064764.1 |
Gene range: | -(246959, 247474) | Protein Length: | 171aa |
Gene description: | MarR family transcriptional regulator | ||
COG prediction: | [K] Transcriptional regulators | ||
KEGG prediction: | MarR family transcriptional regulator | ||
SEED prediction: | Transcriptional regulator, MarR family | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | - none - | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 171 | MarR family transcriptional regulator [Candidatus Liber | |||
315122225 | 171 | MarR family transcriptional regulator [Candidatus Liber | 1 | 3e-80 | |
116251384 | 171 | MarR family transcriptional regulator [Rhizobium legumi | 1 | 1e-65 | |
222085504 | 172 | transcriptional regulator protein [Agrobacterium radiob | 1 | 5e-65 | |
86357144 | 171 | MarR family transcriptional regulator [Rhizobium etli C | 1 | 3e-64 | |
209548718 | 171 | MarR family transcriptional regulator [Rhizobium legumi | 1 | 2e-63 | |
227821528 | 170 | putative MarR family transcriptional regulator [Sinorhi | 1 | 2e-63 | |
114704836 | 169 | putative transcription regulator protein [Fulvimarina p | 1 | 8e-62 | |
13476930 | 171 | transcriptional regulator [Mesorhizobium loti MAFF30309 | 1 | 2e-59 | |
260466851 | 171 | transcriptional regulator, MarR family [Mesorhizobium o | 1 | 5e-59 | |
163759197 | 174 | putative transcription regulator protein [Hoeflea photo | 1 | 1e-58 |
>gi|315122225|ref|YP_004062714.1| MarR family transcriptional regulator [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 171 | Back alignment and organism information |
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Score = 300 bits (769), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 152/171 (88%), Positives = 157/171 (91%) Query: 1 MNNNIQSKIISDTDSAIGNDISGLYVECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQA 60 M NNI SKII TD + N+IS LYVECLRLVERLHR LLDVTRDEFERQGRSDVNAVQA Sbjct: 1 MKNNIGSKIILKTDGNMENNISSLYVECLRLVERLHRGLLDVTRDEFERQGRSDVNAVQA 60 Query: 61 LLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG 120 LLLFNIGDLELTAGELRSRGYYLGSNVSYNLKK+IDL FIK QRS IDKRSIRISLT SG Sbjct: 61 LLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKMIDLDFIKCQRSHIDKRSIRISLTPSG 120 Query: 121 KEIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRLNRFWGDQIAYRL 171 KE+AETIS+LYQRHIESIDKVGGLSVDDFI MNKLLQRLNRFWGDQIAYRL Sbjct: 121 KEVAETISKLYQRHIESIDKVGGLSVDDFIEMNKLLQRLNRFWGDQIAYRL 171 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|116251384|ref|YP_767222.1| MarR family transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] Length = 171 | Back alignment and organism information |
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>gi|222085504|ref|YP_002544034.1| transcriptional regulator protein [Agrobacterium radiobacter K84] Length = 172 | Back alignment and organism information |
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>gi|86357144|ref|YP_469036.1| MarR family transcriptional regulator [Rhizobium etli CFN 42] Length = 171 | Back alignment and organism information |
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>gi|209548718|ref|YP_002280635.1| MarR family transcriptional regulator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 171 | Back alignment and organism information |
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>gi|227821528|ref|YP_002825498.1| putative MarR family transcriptional regulator [Sinorhizobium fredii NGR234] Length = 170 | Back alignment and organism information |
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>gi|114704836|ref|ZP_01437744.1| putative transcription regulator protein [Fulvimarina pelagi HTCC2506] Length = 169 | Back alignment and organism information |
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>gi|13476930|ref|NP_108499.1| transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 171 | Back alignment and organism information |
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>gi|260466851|ref|ZP_05813035.1| transcriptional regulator, MarR family [Mesorhizobium opportunistum WSM2075] Length = 171 | Back alignment and organism information |
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>gi|163759197|ref|ZP_02166283.1| putative transcription regulator protein [Hoeflea phototrophica DFL-43] Length = 174 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 171 | MarR family transcriptional regulator [Candidatus Liber | ||
smart00347 | 101 | smart00347, HTH_MARR, helix_turn_helix multiple antibio | 6e-09 | |
COG1846 | 126 | COG1846, MarR, Transcriptional regulators [Transcriptio | 4e-07 |
>gnl|CDD|128641 smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein | Back alignment and domain information |
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>gnl|CDD|32031 COG1846, MarR, Transcriptional regulators [Transcription] | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 171 | MarR family transcriptional regulator [Candidatus Liber | ||
PRK11512 | 144 | DNA-binding transcriptional repressor MarR; Provisional | 99.89 | |
PRK03573 | 144 | transcriptional regulator SlyA; Provisional | 99.89 | |
PRK10870 | 176 | transcriptional repressor MprA; Provisional | 99.88 | |
TIGR02337 | 130 | HpaR homoprotocatechuate degradation operon regulator, | 99.59 | |
COG5631 | 199 | Predicted transcription regulator, contains HTH domain | 98.22 | |
smart00347 | 101 | HTH_MARR helix_turn_helix multiple antibiotic resistanc | 99.75 | |
COG1846 | 126 | MarR Transcriptional regulators [Transcription] | 99.65 | |
PRK11050 | 155 | manganese transport regulator MntR; Provisional | 98.86 | |
PRK03902 | 142 | manganese transport transcriptional regulator; Provisio | 98.74 | |
smart00529 | 96 | HTH_DTXR Helix-turn-helix diphteria tox regulatory elem | 98.71 | |
COG1321 | 154 | TroR Mn-dependent transcriptional regulator [Transcript | 98.68 | |
COG3355 | 126 | Predicted transcriptional regulator [Transcription] | 98.25 | |
pfam01638 | 90 | HxlR HxlR-like helix-turn-helix. HxlR, a member of this | 98.16 | |
cd00090 | 78 | HTH_ARSR Arsenical Resistance Operon Repressor and simi | 98.11 | |
TIGR01889 | 112 | Staph_reg_Sar staphylococcal accessory regulator family | 98.05 | |
PRK13777 | 190 | transcriptional regulator Hpr; Provisional | 98.05 | |
COG2345 | 218 | Predicted transcriptional regulator [Transcription] | 98.05 | |
pfam03965 | 115 | Pencillinase_R Penicillinase repressor. The penicillina | 97.91 | |
COG1733 | 120 | Predicted transcriptional regulators [Transcription] | 97.88 | |
COG1339 | 214 | Transcriptional regulator of a riboflavin/FAD biosynthe | 97.87 | |
smart00418 | 66 | HTH_ARSR helix_turn_helix, Arsenical Resistance Operon | 97.86 | |
TIGR03433 | 100 | padR_acidobact transcriptional regulator, Acidobacteria | 97.81 | |
COG1497 | 260 | Predicted transcriptional regulator [Transcription] | 97.8 | |
COG1695 | 138 | Predicted transcriptional regulators [Transcription] | 97.6 | |
PRK10082 | 303 | putative DNA-binding transcriptional regulator; Provisi | 97.45 | |
COG3682 | 123 | Predicted transcriptional regulator [Transcription] | 97.44 | |
pfam03551 | 81 | PadR Transcriptional regulator PadR-like family. Member | 97.39 | |
PRK10141 | 106 | DNA-binding transcriptional repressor ArsR; Provisional | 97.39 | |
PRK12681 | 324 | cysB transcriptional regulator CysB; Reviewed | 97.38 | |
TIGR03418 | 291 | chol_sulf_TF putative choline sulfate-utilization trans | 97.34 | |
PRK10341 | 312 | DNA-binding transcriptional activator TdcA; Provisional | 97.34 | |
PRK12680 | 327 | transcriptional regulator CysB-like protein; Reviewed | 97.32 | |
COG4742 | 260 | Predicted transcriptional regulator [Transcription] | 97.31 | |
PRK04172 | 501 | pheS phenylalanyl-tRNA synthetase subunit alpha; Provis | 97.29 | |
PRK10086 | 311 | DNA-binding transcriptional regulator DsdC; Provisional | 97.29 | |
PRK11414 | 221 | putative DNA-binding transcriptional regulator; Provisi | 97.28 | |
CHL00180 | 307 | rbcR LysR transcriptional regulator; Provisional | 97.28 | |
PRK10632 | 309 | putative DNA-binding transcriptional regulator; Provisi | 97.27 | |
PRK11074 | 300 | putative DNA-binding transcriptional regulator; Provisi | 97.19 | |
PRK09791 | 302 | putative DNA-binding transcriptional regulator; Provisi | 97.15 | |
PRK11242 | 292 | DNA-binding transcriptional regulator CynR; Provisional | 97.13 | |
PRK11013 | 309 | DNA-binding transcriptional regulator LysR; Provisional | 97.12 | |
PRK11139 | 295 | DNA-binding transcriptional activator GcvA; Provisional | 97.11 | |
PRK11233 | 305 | nitrogen assimilation transcriptional regulator; Provis | 97.11 | |
TIGR03338 | 212 | phnR_burk phosphonate utilization associated transcript | 97.09 | |
PRK12679 | 316 | cbl transcriptional regulator Cbl; Reviewed | 97.06 | |
PRK09801 | 310 | transcriptional activator TtdR; Provisional | 97.05 | |
PRK09906 | 296 | DNA-binding transcriptional regulator HcaR; Provisional | 97.01 | |
PRK03601 | 275 | transcriptional regulator HdfR; Provisional | 97.0 | |
PRK10837 | 291 | putative DNA-binding transcriptional regulator; Provisi | 97.0 | |
smart00346 | 91 | HTH_ICLR helix_turn_helix isocitrate lyase regulation. | 97.0 | |
PRK12682 | 309 | transcriptional regulator CysB-like protein; Reviewed | 96.98 | |
PRK12684 | 313 | transcriptional regulator CysB-like protein; Reviewed | 96.98 | |
PRK11151 | 305 | DNA-binding transcriptional regulator OxyR; Provisional | 96.96 | |
PRK03837 | 243 | transcriptional regulator NanR; Provisional | 96.93 | |
PRK10094 | 308 | DNA-binding transcriptional activator AllS; Provisional | 96.93 | |
COG0583 | 297 | LysR Transcriptional regulator [Transcription] | 96.91 | |
TIGR03298 | 292 | argP transcriptional regulator, ArgP family. ArgP used | 96.89 | |
TIGR03339 | 279 | phn_lysR aminoethylphosphonate catabolism associated Ly | 96.85 | |
PRK03635 | 295 | chromosome replication initiation inhibitor protein; Va | 96.77 | |
COG1802 | 230 | GntR Transcriptional regulators [Transcription] | 96.77 | |
PRK11062 | 296 | nhaR transcriptional activator NhaR; Provisional | 96.74 | |
PRK12683 | 308 | transcriptional regulator CysB-like protein; Reviewed | 96.67 | |
PRK09986 | 278 | DNA-binding transcriptional activator XapR; Provisional | 96.62 | |
PTZ00326 | 505 | phenylalanyl-tRNA synthetase; Provisional | 96.52 | |
TIGR02702 | 215 | SufR_cyano iron-sulfur cluster biosynthesis transcripti | 96.48 | |
PRK13348 | 294 | chromosome replication initiation inhibitor protein; Pr | 96.46 | |
COG3432 | 95 | Predicted transcriptional regulator [Transcription] | 96.43 | |
COG1725 | 125 | Predicted transcriptional regulators [Transcription] | 96.37 | |
PRK10225 | 257 | DNA-binding transcriptional repressor UxuR; Provisional | 96.29 | |
PRK11337 | 293 | DNA-binding transcriptional repressor RpiR; Provisional | 96.18 | |
PRK09464 | 254 | pdhR transcriptional regulator PdhR; Reviewed | 96.11 | |
PRK11302 | 284 | DNA-binding transcriptional regulator HexR; Provisional | 96.05 | |
TIGR02698 | 130 | CopY_TcrY copper transport repressor, CopY/TcrY family; | 95.94 | |
PRK08898 | 393 | coproporphyrinogen III oxidase; Provisional | 95.87 | |
COG4533 | 564 | ABC-type uncharacterized transport system, periplasmic | 95.83 | |
pfam07381 | 90 | DUF1495 Winged helix DNA-binding domain (DUF1495). This | 95.65 | |
PRK05660 | 378 | coproporphyrinogen III oxidase; Provisional | 95.62 | |
PRK09508 | 314 | leuO leucine transcriptional activator; Reviewed | 95.56 | |
pfam07037 | 122 | DUF1323 Putative transcription regulator (DUF1323). Thi | 95.5 | |
TIGR00738 | 133 | rrf2_super rrf2 family protein (putative transcriptiona | 95.45 | |
pfam03444 | 79 | DUF293 Domain of unknown function. This domain is alway | 95.43 | |
PRK08208 | 436 | coproporphyrinogen III oxidase; Validated | 95.43 | |
PRK08807 | 385 | consensus | 95.28 | |
PRK09990 | 251 | DNA-binding transcriptional regulator GlcC; Provisional | 95.18 | |
PRK08949 | 378 | consensus | 94.93 | |
COG1737 | 281 | RpiR Transcriptional regulators [Transcription] | 94.63 | |
PRK11523 | 258 | DNA-binding transcriptional repressor ExuR; Provisional | 94.48 | |
COG2186 | 241 | FadR Transcriptional regulators [Transcription] | 94.47 | |
PRK11557 | 282 | putative DNA-binding transcriptional regulator; Provisi | 94.3 | |
PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 94.27 | |
PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 94.15 | |
PRK05638 | 443 | threonine synthase; Validated | 94.01 | |
PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 93.93 | |
PRK11920 | 153 | rirA iron-responsive transcriptional regulator; Reviewe | 93.93 | |
PRK06582 | 390 | coproporphyrinogen III oxidase; Provisional | 93.91 | |
COG3327 | 291 | PaaX Phenylacetic acid-responsive transcriptional repre | 93.81 | |
PRK11014 | 141 | transcriptional repressor NsrR; Provisional | 93.79 | |
PRK08629 | 424 | coproporphyrinogen III oxidase; Provisional | 93.52 | |
PRK09249 | 456 | coproporphyrinogen III oxidase; Provisional | 92.89 | |
TIGR02424 | 300 | TF_pcaQ pca operon transcription factor PcaQ; InterPro: | 92.72 | |
cd00186 | 381 | TOP1Ac DNA Topoisomerase, subtype IA; DNA-binding, ATP- | 92.44 | |
TIGR00331 | 343 | hrcA heat-inducible transcription repressor HrcA; Inter | 92.33 | |
PRK09057 | 381 | coproporphyrinogen III oxidase; Provisional | 92.19 | |
PRK05776 | 675 | DNA topoisomerase III; Provisional | 91.67 | |
COG1386 | 184 | scpB Chromosome segregation and condensation protein B | 91.47 | |
COG3398 | 240 | Uncharacterized protein conserved in archaea [Function | 91.31 | |
PRK00082 | 339 | hrcA heat-inducible transcription repressor; Provisiona | 91.12 | |
COG3398 | 240 | Uncharacterized protein conserved in archaea [Function | 91.05 | |
pfam01131 | 403 | Topoisom_bac DNA topoisomerase. This subfamily of topoi | 91.0 | |
TIGR02036 | 302 | dsdC D-serine deaminase transcriptional activator; Inte | 90.92 | |
PRK05582 | 692 | DNA topoisomerase I; Validated | 90.89 | |
pfam04552 | 160 | Sigma54_DBD Sigma-54, DNA binding domain. This DNA bind | 90.8 | |
PRK05823 | 691 | consensus | 90.52 | |
TIGR02431 | 252 | pcaR_pcaU beta-ketoadipate pathway transcriptional regu | 90.48 | |
COG1568 | 354 | Predicted methyltransferases [General function predicti | 90.45 | |
PRK08413 | 733 | consensus | 90.17 | |
PRK07141 | 622 | DNA topoisomerase I; Validated | 90.01 | |
pfam01047 | 59 | MarR MarR family. The Mar proteins are involved in the | 99.23 | |
COG1510 | 177 | Predicted transcriptional regulators [Transcription] | 98.25 | |
COG2512 | 258 | Predicted membrane-associated trancriptional regulator | 97.83 | |
pfam01325 | 58 | Fe_dep_repress Iron dependent repressor, N-terminal DNA | 97.55 | |
pfam01978 | 68 | TrmB Sugar-specific transcriptional regulator TrmB. One | 97.42 | |
pfam01726 | 65 | LexA_DNA_bind LexA DNA binding domain. This is the DNA | 97.32 | |
pfam01022 | 47 | HTH_5 Bacterial regulatory protein, arsR family. Member | 97.18 | |
pfam09339 | 52 | HTH_IclR IclR helix-turn-helix domain. | 97.1 | |
PRK00215 | 204 | LexA repressor; Validated | 97.04 | |
TIGR01884 | 231 | cas_HTH CRISPR locus-related DNA-binding protein; Inter | 97.01 | |
PRK09954 | 362 | hypothetical protein; Provisional | 96.89 | |
PRK12423 | 202 | LexA repressor; Provisional | 96.86 | |
PRK09834 | 264 | DNA-binding transcriptional activator MhpR; Provisional | 96.86 | |
PRK11569 | 274 | transcriptional repressor IclR; Provisional | 96.71 | |
COG4190 | 144 | Predicted transcriptional regulator [Transcription] | 96.71 | |
PRK10163 | 271 | DNA-binding transcriptional repressor AllR; Provisional | 96.68 | |
COG1378 | 247 | Predicted transcriptional regulators [Transcription] | 96.63 | |
pfam04182 | 73 | B-block_TFIIIC B-block binding subunit of TFIIIC. Yeast | 96.63 | |
COG1414 | 246 | IclR Transcriptional regulator [Transcription] | 96.44 | |
smart00419 | 48 | HTH_CRP helix_turn_helix, cAMP Regulatory protein. | 96.44 | |
PRK11169 | 164 | leucine-responsive transcriptional regulator; Provision | 96.43 | |
PRK11179 | 153 | DNA-binding transcriptional regulator AsnC; Provisional | 96.38 | |
smart00344 | 108 | HTH_ASNC helix_turn_helix ASNC type. AsnC: an autogenou | 96.27 | |
COG1522 | 154 | Lrp Transcriptional regulators [Transcription] | 96.27 | |
PRK11161 | 235 | fumarate/nitrate reduction transcriptional regulator; P | 96.25 | |
COG4189 | 308 | Predicted transcriptional regulator [Transcription] | 96.17 | |
PRK11753 | 211 | cAMP-regulatory protein; Provisional | 96.16 | |
COG2390 | 321 | DeoR Transcriptional regulator, contains sigma factor-r | 96.11 | |
PRK09391 | 224 | fixK transcriptional regulator FixK; Provisional | 96.09 | |
PRK11534 | 224 | DNA-binding transcriptional regulator CsiR; Provisional | 96.08 | |
cd00092 | 67 | HTH_CRP helix_turn_helix, cAMP Regulatory protein C-ter | 96.05 | |
smart00420 | 53 | HTH_DEOR helix_turn_helix, Deoxyribose operon repressor | 95.73 | |
PRK10906 | 252 | DNA-binding transcriptional repressor GlpR; Provisional | 95.65 | |
PRK09392 | 236 | ftrB transcriptional activator FtrB; Provisional | 95.55 | |
PRK10411 | 240 | DNA-binding transcriptional activator FucR; Provisional | 95.51 | |
PRK10434 | 256 | srlR DNA-bindng transcriptional repressor SrlR; Provisi | 95.44 | |
PRK13918 | 201 | CRP/FNR family transcriptional regulator; Provisional | 95.41 | |
pfam03428 | 177 | RP-C Replication protein C N-terminal domain. Replicati | 95.36 | |
PRK09802 | 269 | DNA-binding transcriptional regulator AgaR; Provisional | 95.32 | |
pfam08220 | 57 | HTH_DeoR DeoR-like helix-turn-helix domain. | 95.25 | |
COG3888 | 321 | Predicted transcriptional regulator [Transcription] | 95.21 | |
PRK13509 | 251 | transcriptional repressor UlaR; Provisional | 95.19 | |
COG1349 | 253 | GlpR Transcriptional regulators of sugar metabolism [Tr | 95.0 | |
PRK10402 | 213 | DNA-binding transcriptional activator YeiL; Provisional | 94.82 | |
pfam09012 | 68 | FeoC FeoC like transcriptional regulator. This family c | 94.8 | |
smart00345 | 60 | HTH_GNTR helix_turn_helix gluconate operon transcriptio | 94.8 | |
pfam00126 | 60 | HTH_1 Bacterial regulatory helix-turn-helix protein, ly | 94.73 | |
PRK13626 | 551 | transcriptional regulator SgrR; Provisional | 94.73 | |
COG1959 | 150 | Predicted transcriptional regulator [Transcription] | 94.62 | |
cd07377 | 66 | WHTH_GntR Winged helix-turn-helix (WHTH) DNA-binding do | 94.59 | |
pfam00392 | 64 | GntR Bacterial regulatory proteins, gntR family. This f | 94.44 | |
TIGR02719 | 138 | repress_PhaQ poly-beta-hydroxybutyrate-responsive repre | 94.35 | |
pfam01475 | 120 | FUR Ferric uptake regulator family. This family include | 94.29 | |
TIGR03337 | 231 | phnR transcriptional regulator protein. This family of | 94.19 | |
pfam08279 | 55 | HTH_11 HTH domain. This family includes helix-turn-heli | 94.13 | |
PRK09462 | 148 | fur ferric uptake regulator; Provisional | 94.13 | |
PRK11639 | 169 | zinc uptake transcriptional repressor; Provisional | 94.12 | |
COG0735 | 145 | Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion | 94.02 | |
PRK09764 | 239 | DNA-binding transcriptional repressor MngR; Provisional | 93.94 | |
PRK11402 | 243 | DNA-binding transcriptional regulator FrlR; Provisional | 93.69 | |
pfam00325 | 32 | Crp Bacterial regulatory proteins, crp family. | 93.64 | |
TIGR02944 | 130 | suf_reg_Xantho FeS assembly SUF system regulator; Inter | 93.55 | |
pfam08784 | 103 | RPA_C Replication protein A C terminal. This domain cor | 93.42 | |
PRK10079 | 241 | putative transcriptional regulator; Provisional | 93.29 | |
COG3413 | 215 | Predicted DNA binding protein [General function predict | 93.17 | |
COG2188 | 236 | PhnF Transcriptional regulators [Transcription] | 93.16 | |
pfam05732 | 165 | RepL Firmicute plasmid replication protein (RepL). This | 93.07 | |
pfam02082 | 82 | Rrf2 Transcriptional regulator. This family is related | 92.91 | |
PRK10857 | 164 | DNA-binding transcriptional regulator IscR; Provisional | 92.89 | |
PRK11886 | 319 | biotin--protein ligase; Provisional | 92.71 | |
pfam04967 | 53 | HTH_10 HTH DNA binding domain. | 92.69 | |
pfam07848 | 70 | PaaX PaaX-like protein. This family contains proteins t | 92.48 | |
COG1777 | 217 | Predicted transcriptional regulators [Transcription] | 92.31 | |
pfam05158 | 313 | RNA_pol_Rpc34 RNA polymerase Rpc34 subunit. Subunit spe | 92.25 | |
pfam04545 | 50 | Sigma70_r4 Sigma-70, region 4. Region 4 of sigma-70 lik | 92.19 | |
PRK00118 | 105 | putative DNA-binding protein; Validated | 92.09 | |
pfam01418 | 106 | HTH_6 Helix-turn-helix domain, rpiR family. This domain | 92.08 | |
COG1654 | 79 | BirA Biotin operon repressor [Transcription] | 92.07 | |
TIGR02787 | 255 | codY_Gpos GTP-sensing transcriptional pleiotropic repre | 91.98 | |
TIGR02937 | 162 | sigma70-ECF RNA polymerase sigma factor, sigma-70 famil | 91.86 | |
pfam06969 | 118 | HemN_C HemN C-terminal region. Members of this family a | 91.45 | |
pfam04297 | 101 | UPF0122 Putative helix-turn-helix protein, YlxM / p13 l | 91.45 | |
pfam04492 | 100 | Phage_rep_O Bacteriophage replication protein O. Replic | 91.34 | |
TIGR02980 | 229 | SigBFG RNA polymerase sigma-70 factor, sigma-B/F/G subf | 91.3 | |
COG5340 | 269 | Predicted transcriptional regulator [Transcription] | 91.28 | |
PRK13824 | 404 | replication initiation protein RepC; Provisional | 91.18 | |
PRK04984 | 239 | fatty acid metabolism regulator; Provisional | 91.17 | |
COG3177 | 348 | Fic family protein [Function unknown] | 91.14 | |
PRK09775 | 443 | hypothetical protein; Provisional | 91.07 | |
smart00843 | 63 | Ftsk_gamma This domain directs oriented DNA translocati | 90.95 | |
cd06170 | 57 | LuxR_C_like C-terminal DNA-binding domain of LuxR-like | 90.74 | |
KOG2165 | 765 | consensus | 90.72 | |
pfam09397 | 67 | Ftsk_gamma Ftsk gamma domain. This domain directs orien | 90.69 | |
TIGR02607 | 81 | antidote_HigA addiction module antidote protein, HigA f | 90.43 | |
PRK10360 | 196 | DNA-binding transcriptional activator UhpA; Provisional | 90.18 | |
PRK06474 | 180 | hypothetical protein; Provisional | 90.14 | |
PRK11716 | 269 | DNA-binding transcriptional regulator IlvY; Provisional | 95.66 | |
PRK11482 | 266 | putative DNA-binding transcriptional regulator; Provisi | 91.7 |
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional | Back alignment and domain information |
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>PRK03573 transcriptional regulator SlyA; Provisional | Back alignment and domain information |
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>PRK10870 transcriptional repressor MprA; Provisional | Back alignment and domain information |
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>TIGR02337 HpaR homoprotocatechuate degradation operon regulator, HpaR; InterPro: IPR012712 This Helix-Turn-Helix transcriptional regulator is a member of the MarR family and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate | Back alignment and domain information |
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>COG5631 Predicted transcription regulator, contains HTH domain (MarR family) [Transcription] | Back alignment and domain information |
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>smart00347 HTH_MARR helix_turn_helix multiple antibiotic resistance protein | Back alignment and domain information |
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>COG1846 MarR Transcriptional regulators [Transcription] | Back alignment and domain information |
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>PRK11050 manganese transport regulator MntR; Provisional | Back alignment and domain information |
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>PRK03902 manganese transport transcriptional regulator; Provisional | Back alignment and domain information |
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>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element | Back alignment and domain information |
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>COG1321 TroR Mn-dependent transcriptional regulator [Transcription] | Back alignment and domain information |
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>COG3355 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
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>pfam01638 HxlR HxlR-like helix-turn-helix | Back alignment and domain information |
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>cd00090 HTH_ARSR Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors | Back alignment and domain information |
---|
>TIGR01889 Staph_reg_Sar staphylococcal accessory regulator family; InterPro: IPR010166 This entry represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis | Back alignment and domain information |
---|
>PRK13777 transcriptional regulator Hpr; Provisional | Back alignment and domain information |
---|
>COG2345 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>pfam03965 Pencillinase_R Penicillinase repressor | Back alignment and domain information |
---|
>COG1733 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] | Back alignment and domain information |
---|
>smart00418 HTH_ARSR helix_turn_helix, Arsenical Resistance Operon Repressor | Back alignment and domain information |
---|
>TIGR03433 padR_acidobact transcriptional regulator, Acidobacterial, PadR-family | Back alignment and domain information |
---|
>COG1497 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>COG1695 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK10082 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>COG3682 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>pfam03551 PadR Transcriptional regulator PadR-like family | Back alignment and domain information |
---|
>PRK10141 DNA-binding transcriptional repressor ArsR; Provisional | Back alignment and domain information |
---|
>PRK12681 cysB transcriptional regulator CysB; Reviewed | Back alignment and domain information |
---|
>TIGR03418 chol_sulf_TF putative choline sulfate-utilization transcription factor | Back alignment and domain information |
---|
>PRK10341 DNA-binding transcriptional activator TdcA; Provisional | Back alignment and domain information |
---|
>PRK12680 transcriptional regulator CysB-like protein; Reviewed | Back alignment and domain information |
---|
>COG4742 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
---|
>PRK10086 DNA-binding transcriptional regulator DsdC; Provisional | Back alignment and domain information |
---|
>PRK11414 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>CHL00180 rbcR LysR transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK10632 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK11074 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK09791 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK11242 DNA-binding transcriptional regulator CynR; Provisional | Back alignment and domain information |
---|
>PRK11013 DNA-binding transcriptional regulator LysR; Provisional | Back alignment and domain information |
---|
>PRK11139 DNA-binding transcriptional activator GcvA; Provisional | Back alignment and domain information |
---|
>PRK11233 nitrogen assimilation transcriptional regulator; Provisional | Back alignment and domain information |
---|
>TIGR03338 phnR_burk phosphonate utilization associated transcriptional regulator | Back alignment and domain information |
---|
>PRK12679 cbl transcriptional regulator Cbl; Reviewed | Back alignment and domain information |
---|
>PRK09801 transcriptional activator TtdR; Provisional | Back alignment and domain information |
---|
>PRK09906 DNA-binding transcriptional regulator HcaR; Provisional | Back alignment and domain information |
---|
>PRK03601 transcriptional regulator HdfR; Provisional | Back alignment and domain information |
---|
>PRK10837 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>smart00346 HTH_ICLR helix_turn_helix isocitrate lyase regulation | Back alignment and domain information |
---|
>PRK12682 transcriptional regulator CysB-like protein; Reviewed | Back alignment and domain information |
---|
>PRK12684 transcriptional regulator CysB-like protein; Reviewed | Back alignment and domain information |
---|
>PRK11151 DNA-binding transcriptional regulator OxyR; Provisional | Back alignment and domain information |
---|
>PRK03837 transcriptional regulator NanR; Provisional | Back alignment and domain information |
---|
>PRK10094 DNA-binding transcriptional activator AllS; Provisional | Back alignment and domain information |
---|
>COG0583 LysR Transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>TIGR03298 argP transcriptional regulator, ArgP family | Back alignment and domain information |
---|
>TIGR03339 phn_lysR aminoethylphosphonate catabolism associated LysR family transcriptional regulator | Back alignment and domain information |
---|
>PRK03635 chromosome replication initiation inhibitor protein; Validated | Back alignment and domain information |
---|
>COG1802 GntR Transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK11062 nhaR transcriptional activator NhaR; Provisional | Back alignment and domain information |
---|
>PRK12683 transcriptional regulator CysB-like protein; Reviewed | Back alignment and domain information |
---|
>PRK09986 DNA-binding transcriptional activator XapR; Provisional | Back alignment and domain information |
---|
>PTZ00326 phenylalanyl-tRNA synthetase; Provisional | Back alignment and domain information |
---|
>TIGR02702 SufR_cyano iron-sulfur cluster biosynthesis transcriptional regulator SufR; InterPro: IPR014075 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron | Back alignment and domain information |
---|
>PRK13348 chromosome replication initiation inhibitor protein; Provisional | Back alignment and domain information |
---|
>COG3432 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>COG1725 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK10225 DNA-binding transcriptional repressor UxuR; Provisional | Back alignment and domain information |
---|
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional | Back alignment and domain information |
---|
>PRK09464 pdhR transcriptional regulator PdhR; Reviewed | Back alignment and domain information |
---|
>PRK11302 DNA-binding transcriptional regulator HexR; Provisional | Back alignment and domain information |
---|
>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family; InterPro: IPR014071 This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferable copper resistance) of an Enterococcus faecium (Streptococcus faecium) plasmid | Back alignment and domain information |
---|
>PRK08898 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>COG4533 ABC-type uncharacterized transport system, periplasmic component [General function prediction only] | Back alignment and domain information |
---|
>pfam07381 DUF1495 Winged helix DNA-binding domain (DUF1495) | Back alignment and domain information |
---|
>PRK05660 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK09508 leuO leucine transcriptional activator; Reviewed | Back alignment and domain information |
---|
>pfam07037 DUF1323 Putative transcription regulator (DUF1323) | Back alignment and domain information |
---|
>TIGR00738 rrf2_super rrf2 family protein (putative transcriptional regulator); InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulphovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis strain PCC 6803 hypothetical protein slr0846 | Back alignment and domain information |
---|
>pfam03444 DUF293 Domain of unknown function | Back alignment and domain information |
---|
>PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
---|
>PRK08807 consensus | Back alignment and domain information |
---|
>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional | Back alignment and domain information |
---|
>PRK08949 consensus | Back alignment and domain information |
---|
>COG1737 RpiR Transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK11523 DNA-binding transcriptional repressor ExuR; Provisional | Back alignment and domain information |
---|
>COG2186 FadR Transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK11557 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK05638 threonine synthase; Validated | Back alignment and domain information |
---|
>PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK11920 rirA iron-responsive transcriptional regulator; Reviewed | Back alignment and domain information |
---|
>PRK06582 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>COG3327 PaaX Phenylacetic acid-responsive transcriptional repressor [Transcription] | Back alignment and domain information |
---|
>PRK11014 transcriptional repressor NsrR; Provisional | Back alignment and domain information |
---|
>PRK08629 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK09249 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>TIGR02424 TF_pcaQ pca operon transcription factor PcaQ; InterPro: IPR012787 Members of this family are LysR-family transcription factors associated with operons for catabolism of protocatechuate | Back alignment and domain information |
---|
>cd00186 TOP1Ac DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA topoisomerases I and III, and eukaryotic DNA topoisomerase III and eubacterial and archael reverse gyrases | Back alignment and domain information |
---|
>TIGR00331 hrcA heat-inducible transcription repressor HrcA; InterPro: IPR002571 In response to elevated temperature, both prokaryotic and eukaryotic cells increase expression of a small family of chaperones | Back alignment and domain information |
---|
>PRK09057 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
---|
>PRK05776 DNA topoisomerase III; Provisional | Back alignment and domain information |
---|
>COG1386 scpB Chromosome segregation and condensation protein B [DNA replication, recombination and repair] | Back alignment and domain information |
---|
>COG3398 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
---|
>PRK00082 hrcA heat-inducible transcription repressor; Provisional | Back alignment and domain information |
---|
>COG3398 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
---|
>pfam01131 Topoisom_bac DNA topoisomerase | Back alignment and domain information |
---|
>TIGR02036 dsdC D-serine deaminase transcriptional activator; InterPro: IPR011781 This family, part of the LysR family of transcriptional regulators, activates transcription of the gene for D-serine deaminase, dsdA | Back alignment and domain information |
---|
>PRK05582 DNA topoisomerase I; Validated | Back alignment and domain information |
---|
>pfam04552 Sigma54_DBD Sigma-54, DNA binding domain | Back alignment and domain information |
---|
>PRK05823 consensus | Back alignment and domain information |
---|
>TIGR02431 pcaR_pcaU beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; InterPro: IPR012794 Members of this family are IclR-type transcriptional regulators with similar DNA binding sites, able to bind at least three different metabolites related to protocatechuate metabolism | Back alignment and domain information |
---|
>COG1568 Predicted methyltransferases [General function prediction only] | Back alignment and domain information |
---|
>PRK08413 consensus | Back alignment and domain information |
---|
>PRK07141 DNA topoisomerase I; Validated | Back alignment and domain information |
---|
>pfam01047 MarR MarR family | Back alignment and domain information |
---|
>COG1510 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>COG2512 Predicted membrane-associated trancriptional regulator [Transcription] | Back alignment and domain information |
---|
>pfam01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain | Back alignment and domain information |
---|
>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB | Back alignment and domain information |
---|
>pfam01726 LexA_DNA_bind LexA DNA binding domain | Back alignment and domain information |
---|
>pfam01022 HTH_5 Bacterial regulatory protein, arsR family | Back alignment and domain information |
---|
>pfam09339 HTH_IclR IclR helix-turn-helix domain | Back alignment and domain information |
---|
>PRK00215 LexA repressor; Validated | Back alignment and domain information |
---|
>TIGR01884 cas_HTH CRISPR locus-related DNA-binding protein; InterPro: IPR010163 Most but not all examples of this family are associated with CRISPR loci, a combination of DNA repeats and characteristic proteins encoded near the repeat cluster | Back alignment and domain information |
---|
>PRK09954 hypothetical protein; Provisional | Back alignment and domain information |
---|
>PRK12423 LexA repressor; Provisional | Back alignment and domain information |
---|
>PRK09834 DNA-binding transcriptional activator MhpR; Provisional | Back alignment and domain information |
---|
>PRK11569 transcriptional repressor IclR; Provisional | Back alignment and domain information |
---|
>COG4190 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>PRK10163 DNA-binding transcriptional repressor AllR; Provisional | Back alignment and domain information |
---|
>COG1378 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>pfam04182 B-block_TFIIIC B-block binding subunit of TFIIIC | Back alignment and domain information |
---|
>COG1414 IclR Transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>smart00419 HTH_CRP helix_turn_helix, cAMP Regulatory protein | Back alignment and domain information |
---|
>PRK11169 leucine-responsive transcriptional regulator; Provisional | Back alignment and domain information |
---|
>PRK11179 DNA-binding transcriptional regulator AsnC; Provisional | Back alignment and domain information |
---|
>smart00344 HTH_ASNC helix_turn_helix ASNC type | Back alignment and domain information |
---|
>COG1522 Lrp Transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional | Back alignment and domain information |
---|
>COG4189 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>PRK11753 cAMP-regulatory protein; Provisional | Back alignment and domain information |
---|
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] | Back alignment and domain information |
---|
>PRK09391 fixK transcriptional regulator FixK; Provisional | Back alignment and domain information |
---|
>PRK11534 DNA-binding transcriptional regulator CsiR; Provisional | Back alignment and domain information |
---|
>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family | Back alignment and domain information |
---|
>smart00420 HTH_DEOR helix_turn_helix, Deoxyribose operon repressor | Back alignment and domain information |
---|
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional | Back alignment and domain information |
---|
>PRK09392 ftrB transcriptional activator FtrB; Provisional | Back alignment and domain information |
---|
>PRK10411 DNA-binding transcriptional activator FucR; Provisional | Back alignment and domain information |
---|
>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional | Back alignment and domain information |
---|
>PRK13918 CRP/FNR family transcriptional regulator; Provisional | Back alignment and domain information |
---|
>pfam03428 RP-C Replication protein C N-terminal domain | Back alignment and domain information |
---|
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional | Back alignment and domain information |
---|
>pfam08220 HTH_DeoR DeoR-like helix-turn-helix domain | Back alignment and domain information |
---|
>COG3888 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>PRK13509 transcriptional repressor UlaR; Provisional | Back alignment and domain information |
---|
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional | Back alignment and domain information |
---|
>pfam09012 FeoC FeoC like transcriptional regulator | Back alignment and domain information |
---|
>smart00345 HTH_GNTR helix_turn_helix gluconate operon transcriptional repressor | Back alignment and domain information |
---|
>pfam00126 HTH_1 Bacterial regulatory helix-turn-helix protein, lysR family | Back alignment and domain information |
---|
>PRK13626 transcriptional regulator SgrR; Provisional | Back alignment and domain information |
---|
>COG1959 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>cd07377 WHTH_GntR Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators | Back alignment and domain information |
---|
>pfam00392 GntR Bacterial regulatory proteins, gntR family | Back alignment and domain information |
---|
>TIGR02719 repress_PhaQ poly-beta-hydroxybutyrate-responsive repressor; InterPro: IPR014091 Members of this family are transcriptional regulatory proteins found in the vicinity of poly-beta-hydroxybutyrate (PHB) operons in several species of Bacillus | Back alignment and domain information |
---|
>pfam01475 FUR Ferric uptake regulator family | Back alignment and domain information |
---|
>TIGR03337 phnR transcriptional regulator protein | Back alignment and domain information |
---|
>pfam08279 HTH_11 HTH domain | Back alignment and domain information |
---|
>PRK09462 fur ferric uptake regulator; Provisional | Back alignment and domain information |
---|
>PRK11639 zinc uptake transcriptional repressor; Provisional | Back alignment and domain information |
---|
>COG0735 Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
---|
>PRK09764 DNA-binding transcriptional repressor MngR; Provisional | Back alignment and domain information |
---|
>PRK11402 DNA-binding transcriptional regulator FrlR; Provisional | Back alignment and domain information |
---|
>pfam00325 Crp Bacterial regulatory proteins, crp family | Back alignment and domain information |
---|
>TIGR02944 suf_reg_Xantho FeS assembly SUF system regulator; InterPro: IPR014290 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron | Back alignment and domain information |
---|
>pfam08784 RPA_C Replication protein A C terminal | Back alignment and domain information |
---|
>PRK10079 putative transcriptional regulator; Provisional | Back alignment and domain information |
---|
>COG3413 Predicted DNA binding protein [General function prediction only] | Back alignment and domain information |
---|
>COG2188 PhnF Transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>pfam05732 RepL Firmicute plasmid replication protein (RepL) | Back alignment and domain information |
---|
>pfam02082 Rrf2 Transcriptional regulator | Back alignment and domain information |
---|
>PRK10857 DNA-binding transcriptional regulator IscR; Provisional | Back alignment and domain information |
---|
>PRK11886 biotin--protein ligase; Provisional | Back alignment and domain information |
---|
>pfam04967 HTH_10 HTH DNA binding domain | Back alignment and domain information |
---|
>pfam07848 PaaX PaaX-like protein | Back alignment and domain information |
---|
>COG1777 Predicted transcriptional regulators [Transcription] | Back alignment and domain information |
---|
>pfam05158 RNA_pol_Rpc34 RNA polymerase Rpc34 subunit | Back alignment and domain information |
---|
>pfam04545 Sigma70_r4 Sigma-70, region 4 | Back alignment and domain information |
---|
>PRK00118 putative DNA-binding protein; Validated | Back alignment and domain information |
---|
>pfam01418 HTH_6 Helix-turn-helix domain, rpiR family | Back alignment and domain information |
---|
>COG1654 BirA Biotin operon repressor [Transcription] | Back alignment and domain information |
---|
>TIGR02787 codY_Gpos GTP-sensing transcriptional pleiotropic repressor CodY; InterPro: IPR014154 This entry represents pleiotropic repressors in Bacillus subtilis, CodY, and other Firmicutes (low-GC Gram-positive bacteria) that respond to intracellular levels of GTP and branched chain amino acids | Back alignment and domain information |
---|
>TIGR02937 sigma70-ECF RNA polymerase sigma factor, sigma-70 family; InterPro: IPR014284 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription | Back alignment and domain information |
---|
>pfam06969 HemN_C HemN C-terminal region | Back alignment and domain information |
---|
>pfam04297 UPF0122 Putative helix-turn-helix protein, YlxM / p13 like | Back alignment and domain information |
---|
>pfam04492 Phage_rep_O Bacteriophage replication protein O | Back alignment and domain information |
---|
>TIGR02980 SigBFG RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; InterPro: IPR014322 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription | Back alignment and domain information |
---|
>COG5340 Predicted transcriptional regulator [Transcription] | Back alignment and domain information |
---|
>PRK13824 replication initiation protein RepC; Provisional | Back alignment and domain information |
---|
>PRK04984 fatty acid metabolism regulator; Provisional | Back alignment and domain information |
---|
>COG3177 Fic family protein [Function unknown] | Back alignment and domain information |
---|
>PRK09775 hypothetical protein; Provisional | Back alignment and domain information |
---|
>smart00843 Ftsk_gamma This domain directs oriented DNA translocation and forms a winged helix structure | Back alignment and domain information |
---|
>cd06170 LuxR_C_like C-terminal DNA-binding domain of LuxR-like proteins | Back alignment and domain information |
---|
>KOG2165 consensus | Back alignment and domain information |
---|
>pfam09397 Ftsk_gamma Ftsk gamma domain | Back alignment and domain information |
---|
>TIGR02607 antidote_HigA addiction module antidote protein, HigA family; InterPro: IPR013430 Proteins in this entry form a distinct group of helix-turn-helix proteins, which are strictly bacterial and nearly always shorter than 110 amino acids | Back alignment and domain information |
---|
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional | Back alignment and domain information |
---|
>PRK06474 hypothetical protein; Provisional | Back alignment and domain information |
---|
>PRK11716 DNA-binding transcriptional regulator IlvY; Provisional | Back alignment and domain information |
---|
>PRK11482 putative DNA-binding transcriptional regulator; Provisional | Back alignment and domain information |
---|
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 171 | MarR family transcriptional regulator [Candidatus Liber | ||
2a61_A | 145 | The Crystal Structure Of Transcriptional Regulator | 2e-15 | |
3gfl_A | 146 | Crystal Structure Of The St1710 Mutant (R90a) Prote | 7e-14 | |
3gfj_A | 146 | Crystal Structure Of The St1710 Mutant (R89a) Prote | 2e-13 | |
1jgs_A | 138 | Multiple Antibiotic Resistance Repressor, Marr Leng | 2e-13 | |
2rdp_A | 150 | The Structure Of A Marr Family Protein From Bacillu | 2e-12 | |
2pex_A | 153 | Structure Of Reduced C22s Ohrr From Xanthamonas Cam | 3e-12 | |
2pfb_A | 153 | Structure Of Oxidized Ohrr From Xanthamonas Campest | 7e-12 | |
3f3x_A | 144 | Crystal Structure Of The Transcriptional Regulator | 2e-11 | |
3qpt_A | 147 | Crystal Structure Of The Salmonella Transcriptional | 3e-11 | |
3q5f_A | 147 | Crystal Structure Of The Salmonella Transcriptional | 3e-11 | |
1lj9_A | 144 | The Crystal Structure Of The Transcriptional Regula | 3e-11 | |
1z91_A | 147 | X-Ray Crystal Structure Of Apo-Ohrrc15s In Reduced | 7e-11 | |
3deu_A | 166 | Crystal Structure Of Transcription Regulatory Prote | 7e-11 | |
2eth_A | 154 | Crystal Structure Of A Marr-Like Transcriptional Re | 8e-11 | |
2nnn_A | 140 | Crystal Structure Of Probable Transcriptional Regul | 1e-10 | |
3bpx_A | 148 | Crystal Structure Of Marr Length = 148 | 1e-10 | |
3bpv_A | 138 | Crystal Structure Of Marr Length = 138 | 3e-10 | |
3jw4_A | 148 | The Structure Of A Putative Marr Family Transcripti | 5e-10 | |
3gfm_A | 146 | Crystal Structure Of The St1710 Mutant (K91a) Prote | 7e-10 | |
2gxg_A | 146 | Crystal Structure Of Emrr Homolog From Hyperthermop | 9e-10 | |
3eco_A | 139 | Crystal Structure Of Mepr, A Transcription Regulato | 1e-09 | |
2fa5_A | 162 | The Crystal Structure Of An Unliganded Multiple Ant | 3e-09 | |
3nqo_A | 189 | Crystal Structure Of A Marr Family Transcriptional | 3e-09 | |
2bv6_A | 142 | Crystal Structure Of Mgra, A Global Regulator And M | 3e-09 | |
3hse_A | 140 | Crystal Structure Of Staphylococcus Aureus Protein | 9e-09 | |
1s3j_A | 155 | X-Ray Crystal Structure Of Yuso Protein From Bacill | 1e-08 | |
3mex_A | 142 | Crystal Structure Of Mexr In Oxidized State Length | 1e-08 | |
3cjn_A | 162 | Crystal Structure Of Transcriptional Regulator, Mar | 2e-08 | |
3hrm_A | 140 | Crystal Structure Of Staphylococcus Aureus Protein | 2e-08 | |
1lnw_A | 147 | Crystal Structure Of The Mexr Repressor Of The Mexa | 2e-08 | |
3oop_A | 143 | The Structure Of A Protein With Unknown Function Fr | 3e-08 | |
3nrv_A | 148 | Crystal Structure Of MarrEMRR FAMILY TRANSCRIPTIONA | 3e-08 | |
3e6m_A | 161 | The Crystal Structure Of A Marr Family Transcriptio | 3e-08 | |
3ech_A | 142 | The Marr-Family Repressor Mexr In Complex With Its | 1e-07 | |
3bdd_A | 142 | Crystal Structure Of A Putative Multiple Antibiotic | 4e-07 |
>gi|73536140|pdb|2A61|A Chain A, The Crystal Structure Of Transcriptional Regulator Tm0710 From Thermotoga Maritima Length = 145 | Back alignment and structure |
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 8/140 (5%) Query: 33 ERLHRSLLDVTRDEFER-QGRSDVNAVQALLLFNIG-DLELTAGELRSRGYYLGSNVSYN 90 ER+ R + + + E + + Q +L I + GEL S V+ Sbjct: 8 ERILREICFMVKVEGRKVLRDFGITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGL 67 Query: 91 LKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDFI 150 +K+L G++ D+R+ + +T+ G+E+ E + + + IE I L + Sbjct: 68 VKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEKI--TSDLGKEKSS 125 Query: 151 AMNKLLQRL----NRFWGDQ 166 + L+ L R + Q Sbjct: 126 KILDYLKELKGVMERNFSKQ 145 |
>gi|256599697|pdb|3GFL|A Chain A, Crystal Structure Of The St1710 Mutant (R90a) Protein Length = 146 | Back alignment and structure |
>gi|256599696|pdb|3GFJ|A Chain A, Crystal Structure Of The St1710 Mutant (R89a) Protein Length = 146 | Back alignment and structure |
>gi|18158791|pdb|1JGS|A Chain A, Multiple Antibiotic Resistance Repressor, Marr Length = 138 | Back alignment and structure |
>gi|160286073|pdb|2RDP|A Chain A, The Structure Of A Marr Family Protein From Bacillus Stearothermophilus Length = 150 | Back alignment and structure |
>gi|162329954|pdb|2PEX|A Chain A, Structure Of Reduced C22s Ohrr From Xanthamonas Campestris Length = 153 | Back alignment and structure |
>gi|162329956|pdb|2PFB|A Chain A, Structure Of Oxidized Ohrr From Xanthamonas Campestris Length = 153 | Back alignment and structure |
gi|229597846|pdb|3F3X|A Chain A, Crystal Structure Of The Transcriptional Regulator Bldr From Sulfolobus Solfataricus Length = 144 | Back alignment and structure |
>gi|332138245|pdb|3QPT|A Chain A, Crystal Structure Of The Salmonella Transcriptional Regulator Slya Length = 147 | Back alignment and structure |
>gi|332138206|pdb|3Q5F|A Chain A, Crystal Structure Of The Salmonella Transcriptional Regulator Slya In Complex With Dna Length = 147 | Back alignment and structure |
>gi|28373542|pdb|1LJ9|A Chain A, The Crystal Structure Of The Transcriptional Regulator Slya Length = 144 | Back alignment and structure |
>gi|82407566|pdb|1Z91|A Chain A, X-Ray Crystal Structure Of Apo-Ohrrc15s In Reduced Form: Marr Family Protein Length = 147 | Back alignment and structure |
>gi|192988596|pdb|3DEU|A Chain A, Crystal Structure Of Transcription Regulatory Protein Slya From Salmonella Typhimurium In Complex With Salicylate Ligands Length = 166 | Back alignment and structure |
>gi|83754961|pdb|2ETH|A Chain A, Crystal Structure Of A Marr-Like Transcriptional Regulator (Tm0816) From Thermotoga Maritima At 2.50 A Resolution Length = 154 | Back alignment and structure |
>gi|119390485|pdb|2NNN|A Chain A, Crystal Structure Of Probable Transcriptional Regulator From Pseudomonas Aeruginosa Length = 140 | Back alignment and structure |
>gi|188595948|pdb|3BPX|A Chain A, Crystal Structure Of Marr Length = 148 | Back alignment and structure |
>gi|188595947|pdb|3BPV|A Chain A, Crystal Structure Of Marr Length = 138 | Back alignment and structure |
>gi|281500789|pdb|3JW4|A Chain A, The Structure Of A Putative Marr Family Transcriptional Regulator From Clostridium Acetobutylicum Length = 148 | Back alignment and structure |
>gi|256599698|pdb|3GFM|A Chain A, Crystal Structure Of The St1710 Mutant (K91a) Protein Length = 146 | Back alignment and structure |
gi|145579472|pdb|2GXG|A Chain A, Crystal Structure Of Emrr Homolog From Hyperthermophilic Archaea Sulfolobus Tokodaii Strain7 Length = 146 | Back alignment and structure |
gi|223365857|pdb|3ECO|A Chain A, Crystal Structure Of Mepr, A Transcription Regulator Of The Staphylococcus Aureus Multidrug Efflux Pump Mepa Length = 139 | Back alignment and structure |
>gi|119389448|pdb|2FA5|A Chain A, The Crystal Structure Of An Unliganded Multiple Antibiotic- Resistance Repressor (Marr) From Xanthomonas Campestris Length = 162 | Back alignment and structure |
>gi|301016100|pdb|3NQO|A Chain A, Crystal Structure Of A Marr Family Transcriptional Regulator (Cd1569) From Clostridium Difficile 630 At 2.20 A Resolution Length = 189 | Back alignment and structure |
>gi|116666838|pdb|2BV6|A Chain A, Crystal Structure Of Mgra, A Global Regulator And Major Virulence Determinant In Staphylococcus Aureus Length = 142 | Back alignment and structure |
>gi|251837069|pdb|3HSE|A Chain A, Crystal Structure Of Staphylococcus Aureus Protein Sarz In Reduced Form Length = 140 | Back alignment and structure |
>gi|48425545|pdb|1S3J|A Chain A, X-Ray Crystal Structure Of Yuso Protein From Bacillus Subtilis Length = 155 | Back alignment and structure |
>gi|301598581|pdb|3MEX|A Chain A, Crystal Structure Of Mexr In Oxidized State Length = 142 | Back alignment and structure |
>gi|170785279|pdb|3CJN|A Chain A, Crystal Structure Of Transcriptional Regulator, Marr Family, From Silicibacter Pomeroyi Length = 162 | Back alignment and structure |
>gi|251837055|pdb|3HRM|A Chain A, Crystal Structure Of Staphylococcus Aureus Protein Sarz In Sulfenic Acid Form Length = 140 | Back alignment and structure |
>gi|24158873|pdb|1LNW|A Chain A, Crystal Structure Of The Mexr Repressor Of The Mexab-Oprm Multidrug Efflux Operon Of Pseudomonas Aeruginosa Length = 147 | Back alignment and structure |
>gi|307568447|pdb|3OOP|A Chain A, The Structure Of A Protein With Unknown Function From Listeria Innocua Clip11262 Length = 143 | Back alignment and structure |
>gi|306991857|pdb|3NRV|A Chain A, Crystal Structure Of MarrEMRR FAMILY TRANSCRIPTIONAL REGULATOR FROM Acinetobacter Sp. Adp1 Length = 148 | Back alignment and structure |
>gi|197725351|pdb|3E6M|A Chain A, The Crystal Structure Of A Marr Family Transcriptional Regulator From Silicibacter Pomeroyi Dss. Length = 161 | Back alignment and structure |
>gi|209870500|pdb|3ECH|A Chain A, The Marr-Family Repressor Mexr In Complex With Its Antirepressor Armr Length = 142 | Back alignment and structure |
>gi|161761215|pdb|3BDD|A Chain A, Crystal Structure Of A Putative Multiple Antibiotic-Resistance Repressor (Ssu05_1136) From Streptococcus Suis 891591 AT 2.20 A Resolution Length = 142 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 171 | MarR family transcriptional regulator [Candidatus Liber | ||
1lj9_A | 144 | Transcriptional regulator SLYA; HTH DNA binding protein | 9e-12 | |
3nqo_A | 189 | MARR-family transcriptional regulator; structural genom | 3e-11 | |
3bpv_A | 138 | Transcriptional regulator; MARR, DNA binding, transcrip | 1e-10 | |
3deu_A | 166 | Transcriptional regulator SLYA; MARR, WING-helix, trans | 2e-10 | |
3oop_A | 143 | LIN2960 protein; protein structure initiative, PSI-2, s | 3e-10 | |
1jgs_A | 138 | Multiple antibiotic resistance protein MARR; transcript | 6e-10 | |
2a61_A | 145 | Transcriptional regulator TM0710; APC4350, MCSG, midwes | 6e-10 | |
3nrv_A | 148 | Putative transcriptional regulator (MARR/EMRR FAM; PSI- | 1e-09 | |
3e6m_A | 161 | MARR family transcriptional regulator; APC88769, silici | 1e-09 | |
3jw4_A | 148 | Transcriptional regulator, MARR/EMRR family; DNA-bindin | 1e-09 | |
2fbi_A | 142 | Probable transcriptional regulator; MARR, APC5816, stru | 2e-09 | |
2bv6_A | 142 | MGRA, HTH-type transcriptional regulator MGRA; multidru | 4e-09 | |
2pex_A | 153 | Transcriptional regulator OHRR; transcription regulator | 4e-09 | |
3eco_A | 139 | MEPR; mutlidrug efflux pump regulator winged helix-turn | 7e-09 | |
3hsr_A | 140 | HTH-type transcriptional regulator SARZ; helix-turn-hel | 7e-09 | |
3bj6_A | 152 | Transcriptional regulator, MARR family; helix-turn-heli | 1e-08 | |
3fm5_A | 150 | Transcriptional regulator; MCSG, PF04017, PSI, MARR, st | 2e-08 | |
3boq_A | 160 | Transcriptional regulator, MARR family; structural geno | 2e-08 | |
2nnn_A | 140 | Probable transcriptional regulator; structural genomics | 2e-08 | |
2gxg_A | 146 | 146AA long hypothetical transcriptional regulator; wing | 2e-08 | |
3ech_A | 142 | MEXR, multidrug resistance operon repressor; winged hel | 4e-08 | |
1s3j_A | 155 | YUSO protein; structural genomics, MARR transcriptional | 4e-08 | |
3kp7_A | 151 | Transcriptional regulator TCAR; multiple drug resistanc | 6e-08 | |
2nyx_A | 168 | Probable transcriptional regulatory protein, RV1404; al | 9e-08 | |
3bdd_A | 142 | Regulatory protein MARR; ZP_00875883.1, putative multip | 1e-07 | |
1z91_A | 147 | Organic hydroperoxide resistance transcriptional regula | 1e-07 | |
3bja_A | 139 | Transcriptional regulator, MARR family, putative; NP_97 | 2e-07 | |
2fa5_A | 162 | Transcriptional regulator MARR/EMRR family; multiple an | 2e-07 | |
2fbh_A | 146 | Transcriptional regulator PA3341; MARR, transcription r | 2e-07 | |
1ku9_A | 152 | Hypothetical protein MJ223; putative transcription fact | 2e-07 | |
3f3x_A | 144 | Transcriptional regulator, MARR family, putative; DNA b | 3e-07 | |
2fxa_A | 207 | Protease production regulatory protein HPR; protease po | 5e-07 | |
2rdp_A | 150 | Putative transcriptional regulator MARR; PFAM PF01047, | 6e-07 | |
3g3z_A | 145 | NMB1585, transcriptional regulator, MARR family; transc | 3e-06 | |
1p4x_A | 250 | Staphylococcal accessory regulator A homologue; winged- | 6e-06 | |
2qww_A | 154 | Transcriptional regulator, MARR family; YP_013417.1, mu | 0.002 | |
2frh_A | 127 | SARA, staphylococcal accessory regulator A; winged-heli | 0.004 | |
1p4x_A | 250 | Staphylococcal accessory regulator A homologue; winged- | 7e-05 | |
3cta_A | 230 | Riboflavin kinase; structural genomics, transferase, PS | 0.004 |
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28 Length = 144 | Back alignment and structure |
---|
Score = 64.9 bits (158), Expect = 9e-12 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 6/136 (4%) Query: 27 ECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDLE-LTAGELRSRGYYLGS 85 + LR + + R+L ++ EF+ + Q L L + + + ++ + Sbjct: 2 DILREIGMIARALDSISNIEFKELS---LTRGQYLYLVRVCENPGIIQEKIAELIKVDRT 58 Query: 86 NVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLS 145 + +K+L + GFI Q +K+ RI T+ GK + I + Q + + GLS Sbjct: 59 TAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRENQHSNQVA--LQGLS 116 Query: 146 VDDFIAMNKLLQRLNR 161 + + L R+ + Sbjct: 117 EVEISQLADYLVRMRK 132 |
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile} Length = 189 | Back alignment and structure |
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>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A* Length = 138 | Back alignment and structure |
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>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28 Length = 166 | Back alignment and structure |
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>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua} Length = 143 | Back alignment and structure |
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>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28 Length = 138 | Back alignment and structure |
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>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28 Length = 145 | Back alignment and structure |
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>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP} Length = 148 | Back alignment and structure |
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>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi} Length = 161 | Back alignment and structure |
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>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} Length = 148 | Back alignment and structure |
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>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomics, PSI, protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28 Length = 142 | Back alignment and structure |
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>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28 Length = 142 | Back alignment and structure |
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>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A Length = 153 | Back alignment and structure |
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>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} Length = 139 | Back alignment and structure |
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>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcriptional regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A Length = 140 | Back alignment and structure |
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>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, structural genomics, PSI-2; 2.01A {Silicibacter pomeroyi dss-3} Length = 152 | Back alignment and structure |
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>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structural genomics, protein structure initiative; HET: GOL; 2.00A {Rhodococcus jostii RHA1} Length = 150 | Back alignment and structure |
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>3boq_A Transcriptional regulator, MARR family; structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3} Length = 160 | Back alignment and structure |
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>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} Length = 140 | Back |
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