254780392
leucyl aminopeptidase
GeneID in NCBI database: | 8209377 | Locus tag: | CLIBASIA_01385 |
Protein GI in NCBI database: | 254780392 | Protein Accession: | YP_003064805.1 |
Gene range: | -(290859, 292343) | Protein Length: | 494aa |
Gene description: | leucyl aminopeptidase | ||
COG prediction: | [E] Leucyl aminopeptidase | ||
KEGG prediction: | leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] | ||
SEED prediction: | Cytosol aminopeptidase PepA (EC 3.4.11.1) | ||
Pathway involved in KEGG: | Glutathione metabolism [PATH:las00480] | ||
Subsystem involved in SEED: | Aminopeptidases (EC 3.4.11.-) | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | |||
315122196 | 500 | leucyl aminopeptidase [Candidatus Liberibacter solanace | 1 | 0.0 | |
209548673 | 496 | leucyl aminopeptidase [Rhizobium leguminosarum bv. trif | 1 | 1e-161 | |
241203951 | 496 | leucyl aminopeptidase [Rhizobium leguminosarum bv. trif | 1 | 1e-160 | |
86357094 | 497 | leucyl aminopeptidase [Rhizobium etli CFN 42] Length = | 1 | 1e-159 | |
116251337 | 496 | leucyl aminopeptidase [Rhizobium leguminosarum bv. vici | 1 | 1e-158 | |
190891138 | 496 | leucyl aminopeptidase [Rhizobium etli CIAT 652] Length | 1 | 1e-158 | |
327188012 | 496 | leucyl aminopeptidase protein [Rhizobium etli CNPAF512] | 1 | 1e-157 | |
227821477 | 497 | leucyl aminopeptidase [Sinorhizobium fredii NGR234] Len | 1 | 1e-155 | |
15964908 | 497 | leucyl aminopeptidase [Sinorhizobium meliloti 1021] Len | 1 | 1e-153 | |
150395990 | 497 | leucyl aminopeptidase [Sinorhizobium medicae WSM419] Le | 1 | 1e-151 |
>gi|315122196|ref|YP_004062685.1| leucyl aminopeptidase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 500 | Back alignment and organism information |
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Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/500 (80%), Positives = 445/500 (89%), Gaps = 6/500 (1%) Query: 1 MDIKFSFAKNPSIKQEGLAILLKTSFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHLNI 60 MDIKFSFA+NP IK+ G+AILLKT+FSDV GLS +GS +V RA SVKNF GESKSHLNI Sbjct: 1 MDIKFSFARNPFIKKGGMAILLKTNFSDVTGLSFVGSLGVVERAASVKNFTGESKSHLNI 60 Query: 61 LAPVDCVWDRLVVAGIGDPR--DANFSWLKAGGSIASYIEEDKNIEIFVDVPEYPITKAE 118 L P CVWDRLVV GIGDPR D FSWLKAGG+ AS+IEEDKNIEIFVDVPEYPITK E Sbjct: 61 LVPEGCVWDRLVVVGIGDPRIKDEKFSWLKAGGNAASFIEEDKNIEIFVDVPEYPITKEE 120 Query: 119 IRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENI----SVTIVTEMIQQSSQVVADIQSV 174 IRD LGF+LK Y FD+YKTKK+E SS +S ++I SVT +T+ +QS+ VVADI+SV Sbjct: 121 IRDFTLGFILKLYNFDRYKTKKKEDSSLQSNDSINDSISVTFITQTFEQSNPVVADIKSV 180 Query: 175 VKGVNLARDIINEPANVLGTDEFCKQVRKLESLGVAVEILDKEAMHKLGMNALLAVAQGS 234 V GVNLARDI+NEPANVLGTDEFC+QV+KLESLGV V+ILDK+ M +LGMNALLAV+QGS Sbjct: 181 VNGVNLARDIVNEPANVLGTDEFCEQVKKLESLGVEVDILDKDTMAQLGMNALLAVSQGS 240 Query: 235 SRPPYLAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLL 294 SRPPYL VMKW GG+ +QPLAFIGKGVVFD+GGIS+KPS+GMEEMKGDL GAAAVTGLL Sbjct: 241 SRPPYLVVMKWNGGNQCDQPLAFIGKGVVFDSGGISLKPSNGMEEMKGDLAGAAAVTGLL 300 Query: 295 HVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALW 354 VLAERKAK+NAIG+LALVENMP SSAQRPGDIVRS+SGQ+IEVINTDAEGRLILADALW Sbjct: 301 SVLAERKAKVNAIGILALVENMPDSSAQRPGDIVRSLSGQSIEVINTDAEGRLILADALW 360 Query: 355 YCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWRMPMN 414 YC THY P LMIDLATLTGAMVV+LGN+YAGLFANN+ LAEQLLS+GLST ELLWRMPMN Sbjct: 361 YCHTHYKPALMIDLATLTGAMVVALGNVYAGLFANNNPLAEQLLSAGLSTEELLWRMPMN 420 Query: 415 EEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQS 474 +EYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFV+D SWAHIDIAG ATG +PKEINQS Sbjct: 421 DEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVKDTSWAHIDIAGTATGNHPKEINQS 480 Query: 475 WASGFGVRLLDEFVRAFYEK 494 WASGFGVRLLD FVR FYEK Sbjct: 481 WASGFGVRLLDTFVRDFYEK 500 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|209548673|ref|YP_002280590.1| leucyl aminopeptidase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 496 | Back alignment and organism information |
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>gi|241203951|ref|YP_002975047.1| leucyl aminopeptidase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 496 | Back alignment and organism information |
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>gi|86357094|ref|YP_468986.1| leucyl aminopeptidase [Rhizobium etli CFN 42] Length = 497 | Back alignment and organism information |
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>gi|116251337|ref|YP_767175.1| leucyl aminopeptidase [Rhizobium leguminosarum bv. viciae 3841] Length = 496 | Back alignment and organism information |
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>gi|190891138|ref|YP_001977680.1| leucyl aminopeptidase [Rhizobium etli CIAT 652] Length = 496 | Back alignment and organism information |
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>gi|327188012|gb|EGE55242.1| leucyl aminopeptidase protein [Rhizobium etli CNPAF512] Length = 496 | Back alignment and organism information |
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>gi|227821477|ref|YP_002825447.1| leucyl aminopeptidase [Sinorhizobium fredii NGR234] Length = 497 | Back alignment and organism information |
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>gi|15964908|ref|NP_385261.1| leucyl aminopeptidase [Sinorhizobium meliloti 1021] Length = 497 | Back alignment and organism information |
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>gi|150395990|ref|YP_001326457.1| leucyl aminopeptidase [Sinorhizobium medicae WSM419] Length = 497 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
PRK00913 | 485 | PRK00913, PRK00913, multifunctional aminopeptidase A; P | 1e-172 | |
cd00433 | 468 | cd00433, Peptidase_M17, Cytosol aminopeptidase family, | 1e-136 | |
COG0260 | 485 | COG0260, PepB, Leucyl aminopeptidase [Amino acid transp | 1e-141 | |
pfam00883 | 312 | pfam00883, Peptidase_M17, Cytosol aminopeptidase family | 1e-110 | |
PRK05015 | 424 | PRK05015, PRK05015, aminopeptidase B; Provisional | 9e-58 | |
KOG2597 | 513 | KOG2597, KOG2597, KOG2597, Predicted aminopeptidase of | 5e-87 | |
PTZ00412 | 569 | PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional | 1e-67 | |
pfam02789 | 126 | pfam02789, Peptidase_M17_N, Cytosol aminopeptidase fami | 2e-10 |
>gnl|CDD|179165 PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional | Back alignment and domain information |
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>gnl|CDD|48344 cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
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>gnl|CDD|30609 COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|144468 pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain | Back alignment and domain information |
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>gnl|CDD|179915 PRK05015, PRK05015, aminopeptidase B; Provisional | Back alignment and domain information |
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>gnl|CDD|37808 KOG2597, KOG2597, KOG2597, Predicted aminopeptidase of the M17 family [General function prediction only] | Back alignment and domain information |
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>gnl|CDD|185602 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional | Back alignment and domain information |
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>gnl|CDD|145770 pfam02789, Peptidase_M17_N, Cytosol aminopeptidase family, N-terminal domain | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
PRK00913 | 491 | leucyl aminopeptidase; Provisional | 100.0 | |
cd00433 | 468 | Peptidase_M17 Cytosol aminopeptidase family, N-terminal | 100.0 | |
KOG2597 | 513 | consensus | 100.0 | |
COG0260 | 485 | PepB Leucyl aminopeptidase [Amino acid transport and me | 100.0 | |
pfam00883 | 312 | Peptidase_M17 Cytosol aminopeptidase family, catalytic | 100.0 | |
PRK05015 | 424 | aminopeptidase B; Provisional | 100.0 | |
pfam02789 | 126 | Peptidase_M17_N Cytosol aminopeptidase family, N-termin | 99.69 | |
PRK06837 | 427 | acetylornithine deacetylase; Provisional | 95.33 | |
PRK06915 | 422 | acetylornithine deacetylase; Validated | 94.82 | |
PRK07522 | 387 | acetylornithine deacetylase; Provisional | 91.03 |
>PRK00913 leucyl aminopeptidase; Provisional | Back alignment and domain information |
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>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
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>KOG2597 consensus | Back alignment and domain information |
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>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
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>pfam00883 Peptidase_M17 Cytosol aminopeptidase family, catalytic domain | Back alignment and domain information |
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>PRK05015 aminopeptidase B; Provisional | Back alignment and domain information |
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>pfam02789 Peptidase_M17_N Cytosol aminopeptidase family, N-terminal domain | Back alignment and domain information |
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>PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
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>PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
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>PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
1gyt_A | 503 | E. Coli Aminopeptidase A (Pepa) Length = 503 | 1e-104 | |
3h8e_A | 497 | Low Ph Native Structure Of Leucine Aminopeptidase F | 1e-103 | |
3jru_B | 490 | Crystal Structure Of Leucyl Aminopeptidase (Pepa) F | 4e-93 | |
2ewb_A | 486 | The Crystal Structure Of Bovine Lens Leucine Aminop | 9e-77 | |
2j9a_A | 487 | Bllap In Complex With Microginin Fr1 Length = 487 | 1e-76 | |
1lcp_A | 484 | Bovine Lens Leucine Aminopeptidase Complexed With L | 1e-76 | |
1bpm_A | 487 | Differentiation And Identification Of The Two Catal | 1e-76 | |
1bll_E | 488 | X-Ray Crystallographic Determination Of The Structu | 1e-76 | |
3pei_A | 486 | Crystal Structure Of Cytosol Aminopeptidase From Fr | 2e-74 | |
3kqx_A | 528 | Structure Of A Protease 1 Length = 528 | 3e-68 | |
3kzw_A | 515 | Crystal Structure Of Cytosol Aminopeptidase From St | 6e-66 | |
3ij3_A | 482 | 1.8 Angstrom Resolution Crystal Structure Of Cytoso | 3e-68 | |
2hb6_A | 491 | Structure Of Caenorhabditis Elegans Leucine Aminope | 1e-43 |
gi|21730291|pdb|1GYT|A Chain A, E. Coli Aminopeptidase A (Pepa) Length = 503 | Back alignment and structure |
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 167/503 (33%), Positives = 266/503 (52%), Gaps = 17/503 (3%) Query: 1 MDIKFSFAKNPSIKQEGLAILLKT--SFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHL 58 M+ + + + + S +A S + + G+ L Sbjct: 1 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL 60 Query: 59 NILAPVDCVWDRLVVAGIGDPRDANFSWLK-AGGSIASYIEEDKNIEIFVDVPEYPITK- 116 + + + +R+++ G G R+ + K + + + ++E + E + Sbjct: 61 LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR 120 Query: 117 ---AEIRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQS 173 ++R V Y+FDQ KT K E P K +V E+ + + + Sbjct: 121 NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSG-ERAIQHGLA 179 Query: 174 VVKGVNLARDIINEPANVLGTDEFCKQVRKLESLGVAV---EILDKEAMHKLGMNALLAV 230 + G+ A+D+ N P N+ Q R+L ++ ++ M +LGM++ LAV Sbjct: 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAV 239 Query: 231 AQGSSRPPYLAVMKWE-GGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAA 289 QGS ++V++++ + +P+ +GKG+ FD+GGISIKPS GM+EMK D+ GAAA Sbjct: 240 GQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAA 299 Query: 290 VTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLIL 349 V G++ ++AE + IN IGVLA ENMPG A RPGD++ +MSGQT+EV+NTDAEGRL+L Sbjct: 300 VYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVL 359 Query: 350 ADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLW 409 D L Y + P +ID+ATLTGA V++LG+ GL AN++ LA +L+++ +G+ W Sbjct: 360 CDVLTYVER-FEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAW 418 Query: 410 RMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPK 469 R+P+ +EY + +ES FADM NIGGR G+I A FL +F + +WAH+DIAG A + Sbjct: 419 RLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAW----R 474 Query: 470 EINQSWASGFGVRLLDEFVRAFY 492 A+G V LL +F+ Sbjct: 475 SGKAKGATGRPVALLAQFLLNRA 497 |
gi|294662374|pdb|3H8E|A Chain A, Low Ph Native Structure Of Leucine Aminopeptidase From Pseud Putida Length = 497 | Back alignment and structure |
gi|306440509|pdb|3JRU|B Chain B, Crystal Structure Of Leucyl Aminopeptidase (Pepa) From Xoo0834, Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 490 | Back alignment and structure |
>gi|93279321|pdb|2EWB|A Chain A, The Crystal Structure Of Bovine Lens Leucine Aminopeptidase In Complex With Zofenoprilat Length = 486 | Back alignment and structure |
>gi|122920855|pdb|2J9A|A Chain A, Bllap In Complex With Microginin Fr1 Length = 487 | Back alignment and structure |
>gi|1127256|pdb|1LCP|A Chain A, Bovine Lens Leucine Aminopeptidase Complexed With L-Leucine Phosphonic Acid Length = 484 | Back alignment and structure |
>gi|157830427|pdb|1BPM|A Chain A, Differentiation And Identification Of The Two Catalytic Metal Binding Sites In Bovine Lens Leucine Aminopeptidase By X-Ray Crystallography Length = 487 | Back alignment and structure |
>gi|809230|pdb|1BLL|E Chain E, X-Ray Crystallographic Determination Of The Structure Of Bovine Lens Leucine Aminopeptidase Complexed With Amastatin: Formulation Of A Catalytic Mechanism Featuring A Gem-Diolate Transition State Length = 488 | Back alignment and structure |
>gi|313103972|pdb|3PEI|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Francisella Tularensis Length = 486 | Back alignment and structure |
>gi|285803543|pdb|3KQX|A Chain A, Structure Of A Protease 1 Length = 528 | Back alignment and structure |
>gi|283807231|pdb|3KZW|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Staphylococcus Aureus Col Length = 515 | Back alignment and structure |
>gi|255918067|pdb|3IJ3|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Cytosol Aminopeptidase From Coxiella Burnetii Length = 482 | Back alignment and structure |
>gi|114794306|pdb|2HB6|A Chain A, Structure Of Caenorhabditis Elegans Leucine Aminopeptidase (Lap1) Length = 491 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
3ij3_A | 482 | Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP | 1e-123 | |
3kr4_A | 528 | M17 leucyl aminopeptidase; protease, hydrolase; HET: BE | 1e-119 | |
3h8g_F | 497 | Cytosol aminopeptidase; cytoplasm, hydrolase, manganese | 1e-115 | |
3kzw_A | 515 | Cytosol aminopeptidase; cytoplasm, hydrolase, manganese | 1e-114 | |
1gyt_A | 503 | Cytosol aminopeptidase; hydrolase, DNA recombination; 2 | 1e-114 | |
3jru_B | 490 | Probable cytosol aminopeptidase; bacterial blight, XOO0 | 1e-109 | |
1lam_A | 484 | Leucine aminopeptidase; exopeptidase, metallopeptidase, | 1e-103 | |
2hc9_A | 491 | Leucine aminopeptidase 1; zinc, carbonate, structural g | 3e-93 |
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Length = 482 | Back alignment and structure |
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Score = 436 bits (1124), Expect = e-123 Identities = 134/479 (27%), Positives = 221/479 (46%), Gaps = 39/479 (8%) Query: 18 LAILLKTSFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHLNILAPVDCVWDRLVVAGIG 77 + ++ D L + + V F+G + + +I + + V+ G+ Sbjct: 40 IQPMMPDELPDW----LDTQDARTQQWVKASGFVGLAGTICSIPESTGAL--QRVLLGVS 93 Query: 78 DPRDANFSWLKAGGSIASYIEEDKNIEIFVDVPEYPITKAEIRDLVLGFMLKTYTFDQYK 137 D + + + + ++ D E +L F L +Y F+ Y+ Sbjct: 94 DYEYS-WDFGGLSKVLPP-----GAFQLNRDDFE---DDEYYERALLAFGLGSYQFNAYR 144 Query: 138 TKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQSVVKGVNLARDIINEPANVLGTDEF 197 + + + + + + L RD+IN PA +G E Sbjct: 145 KRSPYLAK---------------LFLPQAHRKRVTDWLTTIYLIRDLINTPAEDMGPSEL 189 Query: 198 CKQVRKL-ESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQPLA 256 + V+ + + V+I++ + + A+ AV + SRPP L +KW + + Sbjct: 190 AQAVKHVAKEFEAKVKIIESKDLET-EFPAIYAVGRAGSRPPLLIDLKWGDIKAP--KVT 246 Query: 257 FIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENM 316 +GKGV FD+GG+ IK GM MK D+GGAA GL ++ ++ + ++ VEN Sbjct: 247 LVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQLPVRLRLLIPAVENA 306 Query: 317 PGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMV 376 GS + RPGD+V++ + +TIE+ NTDAEGR++LADAL +P L+ID +TLTGA Sbjct: 307 IGSRSYRPGDVVQTRARKTIEITNTDAEGRVVLADALAEAV-KEDPDLIIDFSTLTGAAR 365 Query: 377 VSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWRMPMNEEYNKLIESKFADMKNIG-GRG 435 ++LG LFAN D LA+ L+ + L T + LWR+P+ + Y ++S+ AD+ N R Sbjct: 366 IALGPNLPALFANQDSLAQALIDASLKTDDPLWRLPLFQPYRNYLKSEVADLTNSSQNRM 425 Query: 436 AGSIVAAQFLEKFVQDA-SWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEFVRAFYE 493 AG+I AA FL+ FV D WAH DI P +R + ++ Y Sbjct: 426 AGAITAALFLQHFVSDQIPWAHFDIFAWNLEDLP--GRPIGGEAMALRAVFHYLEQQYR 482 |
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* Length = 528 | Back alignment and structure |
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>3h8g_F Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-bindi protease; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Length = 497 | Back alignment and structure |
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>3kzw_A Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Length = 515 | Back alignment and structure |
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>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Length = 503 | Back alignment and structure |
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>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Length = 490 | Back alignment and structure |
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>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E 2j9a_A* 2ewb_A* Length = 484 | Back alignment and structure |
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>2hc9_A Leucine aminopeptidase 1; zinc, carbonate, structural genomics, PSI, protein structure initiative; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Length = 491 | Back alignment and structure |
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Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
3h8g_F | 497 | Cytosol aminopeptidase; cytoplasm, hydrolase, manganese | 100.0 | |
1gyt_A | 503 | Cytosol aminopeptidase; hydrolase, DNA recombination; 2 | 100.0 | |
3jru_B | 490 | Probable cytosol aminopeptidase; bacterial blight, XOO0 | 100.0 | |
3kzw_A | 515 | Cytosol aminopeptidase; cytoplasm, hydrolase, manganese | 100.0 | |
3kr4_A | 528 | M17 leucyl aminopeptidase; protease, hydrolase; HET: BE | 100.0 | |
1lam_A | 484 | Leucine aminopeptidase; exopeptidase, metallopeptidase, | 100.0 | |
3ij3_A | 482 | Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP | 100.0 | |
2hc9_A | 491 | Leucine aminopeptidase 1; zinc, carbonate, structural g | 100.0 | |
2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidase, me | 95.42 | |
1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, site- d | 94.8 | |
3pfo_A | 433 | Putative acetylornithine deacetylase; metal binding, me | 92.19 | |
3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putative zi | 90.07 |
>3h8g_F Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-bindi protease; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* | Back alignment and structure |
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Probab=100.00 E-value=0 Score=1201.16 Aligned_cols=485 Identities=34% Similarity=0.557 Sum_probs=442.2 Q ss_pred CEEEEEEECCCCCCCCEEEEEECCCCCCC--CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC Q ss_conf 90699950778776771699962686632--2221238888999999808998367878998437888744599994488 Q gi|254780392|r 1 MDIKFSFAKNPSIKQEGLAILLKTSFSDV--AGLSLIGSPSIVMRAVSVKNFIGESKSHLNILAPVDCVWDRLVVAGIGD 78 (494) Q Consensus 1 M~mkis~~~~~~~~~d~lvV~~~~~~~~~--~~~~~~~~~~~L~~~i~~~~F~GK~Ge~l~l~~~~g~~~~rViLVGLG~ 78 (494) |++.++.......++|+|+|++.++.... ....+....+.|.+++++.+|+||.||++.++.+.+..++||+|||||+ T Consensus 1 M~i~v~s~~~~~~k~d~LVv~v~e~~~l~~~~~~Ld~~~~g~I~~~lk~~dF~GK~Ge~l~l~~~~g~~a~rIlLVGLGk 80 (497) T 3h8g_F 1 MELVVKSVAAASVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLVGSGK 80 (497) T ss_dssp CEEEEECSCGGGCCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEEEEES T ss_pred CEEEEEECCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC T ss_conf 97899808822324887999978898766899987797768999999708998888988998189987668899997786 Q ss_pred HHHCCH-HHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 155899-999999999998531697489941778999-----98999999999971477754444364333232100013 Q gi|254780392|r 79 PRDANF-SWLKAGGSIASYIEEDKNIEIFVDVPEYPI-----TKAEIRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENI 152 (494) Q Consensus 79 ~~~~~~-~~~ra~a~~~~~l~~~~~~~v~i~l~~~~~-----~~~~~~~~~eG~~L~~Y~Fd~yKskk~~~~~~~~~~~~ 152 (494) .++++. +++++++++++.+++.+.+++.+.++.... ....++++++|+.+++|+|++|||+++++.... .+ T Consensus 81 ~~~ls~~~~rka~~~a~~~lk~~~~~~~~i~l~~~~~~~~~~~~~~~~~~aeG~~lg~Y~Fd~yKskk~~~~~l~---~v 157 (497) T 3h8g_F 81 DEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVEPRALK---KV 157 (497) T ss_dssp SSCBCHHHHHHHHHHHHHHHHHSCCSEEEECCTTCCBTTSCTTTHHHHHHHHHHHHTTCCCCTTCSSCCCCCSCC---EE T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE---EE T ss_conf 032799999999999999997558861999533245454200599999999999853432234445666655520---24 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH-C-CCCCHHHHCCCCCCHHHHHHHHHH Q ss_conf 33224577378999999999999999986420212540302999999999861-1-332100001110001345898874 Q gi|254780392|r 153 SVTIVTEMIQQSSQVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKLE-S-LGVAVEILDKEAMHKLGMNALLAV 230 (494) Q Consensus 153 ~i~~~~~~~~~~~~~i~~~~aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l~-~-~gl~v~Vld~~~L~klGMg~llaV 230 (494) .+..........++.+++++++++||++||||+|+|||+|||++||+++++++ + .+++|+|+|+++|+++|||+||+| T Consensus 158 ~l~~~~~~~~~~~~~l~~~~aiaegv~lARDLvN~P~N~ltP~~lA~~A~~lak~~~~l~v~Vld~~~l~klGMG~lLaV 237 (497) T 3h8g_F 158 TLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAV 237 (497) T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHH T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEECC T ss_conf 31235677799999999999999999999852458973358669999999986126826999950798640574302111 Q ss_pred HCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 20257785068862057886565126630211200663100333320023221123568999999998708787289986 Q gi|254780392|r 231 AQGSSRPPYLAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVL 310 (494) Q Consensus 231 gqGS~~~Prli~l~Y~g~~~~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~ 310 (494) ||||.+|||||+|+|+|+++.++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++|+||++++ T Consensus 238 gqGS~~~Prli~l~y~g~~~~~~~i~lVGKGitFDtGG~slKp~~~M~~Mk~DM~GaAaV~g~~~a~a~l~~~~~v~~~~ 317 (497) T 3h8g_F 238 GQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLVCLL 317 (497) T ss_dssp HTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHTCSSEEEEEE T ss_pred CCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 57778998345884158877888379976636742676354567773441376756899999999999809696289998 Q ss_pred EECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECC Q ss_conf 41026689997470776302489588863478664036523678875207961355211120023543177605787089 Q gi|254780392|r 311 ALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANN 390 (494) Q Consensus 311 ~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~ 390 (494) |+|||||||+|||||||||+||||||||.||||||||||||+|+|| ++|+|+.|||+|||||||++|||++++|+|+|| T Consensus 318 ~~~eN~~~~~a~~pgdvi~~~~G~tvev~nTDAEGRlvLaD~l~~a-~~~~p~~iid~ATLTga~~~alG~~~~g~~~n~ 396 (497) T 3h8g_F 318 ACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYA-ERFKPQAVIDIATLTGACIVALGSHTTGLMGNN 396 (497) T ss_dssp EEEEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHH-GGGCCSEEEEEECCCHHHHHHHTTTSEEEEESC T ss_pred EEEECCCCCCCCCCCCEEECCCCCEEEEECCCCHHHEEEHHHHHHH-HHHCCCCEEEEECCCCCEEEECCCCCCCEECCC T ss_conf 7120277888889998327689988985047741330015589999-874987078861141410250378754111486 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC Q ss_conf 89999999989985697176776867888617986417018887467999999998723886769994000011678888 Q gi|254780392|r 391 DVLAEQLLSSGLSTGELLWRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKE 470 (494) Q Consensus 391 ~~~~~~~~~a~~~~ge~~w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~ 470 (494) |+|++++++||+.+||++||||||++|+++|+|++|||+|+|+|+||+||||+||+|||+++||+|||||||||.++ T Consensus 397 ~~l~~~~~~a~~~~~e~~w~lPl~~~~~~~~~s~~AD~~n~~~~~~g~~~aa~Fl~~Fv~~~~w~HlDiAg~a~~~~--- 473 (497) T 3h8g_F 397 DDLVGQLLDAGKRADDRAWQLPLFDEYQEQLDSPFADMGNIGGPKAGTITAGCFLSRFAKAYNWAHMDIAGTAWISG--- 473 (497) T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSSSHHHHHHHHHHTTCTTSCEEEEECTTTSEECS--- T ss_pred HHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC--- T ss_conf 99999999999981898750889889997569932375378989623679999999868998979996677775779--- Q ss_pred CCCCCCCCCCHHHHHHHHHHHC Q ss_conf 8899865435899999999766 Q gi|254780392|r 471 INQSWASGFGVRLLDEFVRAFY 492 (494) Q Consensus 471 ~~~~g~tg~~vr~l~~~~~~~~ 492 (494) +.|+|+||||||||+|||+++. T Consensus 474 ~~~~g~tg~~vr~l~~~l~~~a 495 (497) T 3h8g_F 474 GKDKGATGRPVPLLTQYLLDRA 495 (497) T ss_dssp STTCEECCTTHHHHHHHHHHHH T ss_pred CCCCCCCCHHHHHHHHHHHHHH T ss_conf 9999952379999999999865 |
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 | Back alignment and structure |
---|
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} | Back alignment and structure |
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>3kzw_A Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} | Back alignment and structure |
---|
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* | Back alignment and structure |
---|
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E 2j9a_A* 2ewb_A* | Back alignment and structure |
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>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} | Back alignment and structure |
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>2hc9_A Leucine aminopeptidase 1; zinc, carbonate, structural genomics, PSI, protein structure initiative; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A | Back alignment and structure |
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>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural genomics, PSI-2; HET: BGC; 1.90A {Streptococcus pneumoniae TIGR4} | Back alignment and structure |
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>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
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>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
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>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20/M25/M40, structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
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Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | |||
d1gyta2 | 325 | c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal | 1e-83 | |
d1lama1 | 325 | c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal | 2e-77 | |
d1gyta1 | 178 | c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptida | 6e-10 | |
d1lama2 | 159 | c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptida | 8e-04 |
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 325 | Back information, alignment and structure |
---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Leucine aminopeptidase, C-terminal domain domain: Leucine aminopeptidase, C-terminal domain species: Escherichia coli, PepA [TaxId: 562] Score = 304 bits (779), Expect = 1e-83 Identities = 143/323 (44%), Positives = 209/323 (64%), Gaps = 9/323 (2%) Query: 174 VVKGVNLARDIINEPANVLGTDEFCKQVRKLE---SLGVAVEILDKEAMHKLGMNALLAV 230 + G+ A+D+ N P N+ Q R+L S V ++ ++ M +LGM++ LAV Sbjct: 2 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAV 61 Query: 231 AQGSSRPPYLAVMKWEG-GDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAA 289 QGS ++V++++G + +P+ +GKG+ FD+GGISIKPS GM+EMK D+ GAAA Sbjct: 62 GQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAA 121 Query: 290 VTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLIL 349 V G++ ++AE + IN IGVLA ENMPG A RPGD++ +MSGQT+EV+NTDAEGRL+L Sbjct: 122 VYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVL 181 Query: 350 ADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLW 409 D L Y + P +ID+ATLTGA V++LG+ GL AN++ LA +L+++ +G+ W Sbjct: 182 CDVLTYVE-RFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAW 240 Query: 410 RMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPK 469 R+P+ +EY + +ES FADM NIGGR G+I A FL +F + +WAH+DIAG A Sbjct: 241 RLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKA 300 Query: 470 EINQSWASGFGVRLLDEFVRAFY 492 + A+G V LL +F+ Sbjct: 301 K----GATGRPVALLAQFLLNRA 319 |
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 325 | Back information, alignment and structure |
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>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 178 | Back information, alignment and structure |
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>d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 159 | Back information, alignment and structure |
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Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | Probability |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
d1gyta2 | 325 | Leucine aminopeptidase, C-terminal domain {Escherichia | 100.0 | |
d1lama1 | 325 | Leucine aminopeptidase, C-terminal domain {Cow (Bos tau | 100.0 | |
d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: | 92.79 | |
d1gyta1 | 178 | Leucine aminopeptidase (Aminopeptidase A), N-terminal d | 99.83 | |
d1lama2 | 159 | Leucine aminopeptidase (Aminopeptidase A), N-terminal d | 99.55 | |
g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapiens) | 94.05 | |
d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacillus s | 91.25 |
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Leucine aminopeptidase, C-terminal domain domain: Leucine aminopeptidase, C-terminal domain species: Escherichia coli, PepA [TaxId: 562] Probab=100.00 E-value=0 Score=941.35 Aligned_cols=315 Identities=46% Similarity=0.784 Sum_probs=303.5 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCC--CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC Q ss_conf 99999998642021254030299999999986-113--321000011100013458988742025778506886205788 Q gi|254780392|r 173 SVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESL--GVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGD 249 (494) Q Consensus 173 aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~--gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~ 249 (494) ||++|+++||||+|+|||+|||++|+++++++ +++ +++|+|+++++|+++|||+||+|||||++|||||+|+|+|.+ T Consensus 1 Aia~gvn~aRdLvn~P~N~ltP~~~a~~a~~l~~~~~~~v~v~V~~~~~l~~~Gm~~llaVg~GS~~~p~li~l~y~~~~ 80 (325) T d1gyta2 1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 80 (325) T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC T ss_pred CHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCC T ss_conf 98899999998607992553999999999999987399759999559999757998746785035788871278856866 Q ss_pred C-CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH Q ss_conf 6-565126630211200663100333320023221123568999999998708787289986410266899974707763 Q gi|254780392|r 250 S-EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIV 328 (494) Q Consensus 250 ~-~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi 328 (494) . +.+||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||++++|+||||||++|||||||| T Consensus 81 ~~~~~~i~lVGKGitFDTGG~slKp~~~M~~Mk~DM~GAA~v~g~~~a~a~l~~~~~v~~~~p~~EN~i~~~A~kPgDVi 160 (325) T d1gyta2 81 SEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVL 160 (325) T ss_dssp CTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCCTTCEE T ss_pred CCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCEE T ss_conf 67888779972616873366564456543554431224145788999999728686499997511115678763678745 Q ss_pred CCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC Q ss_conf 02489588863478664036523678875207961355211120023543177605787089899999999899856971 Q gi|254780392|r 329 RSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELL 408 (494) Q Consensus 329 ~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~ 408 (494) |+||||||||.||||||||||||+|+||+ +++|+.|||+|||||||++|||+.++|+|+||++++++++++|+.+||++ T Consensus 161 ~s~~GkTVEI~NTDAEGRLvLADaL~ya~-~~~p~~iiD~ATLTGa~~~ALG~~~ag~~~n~~~~~~~~~~a~~~~ge~~ 239 (325) T d1gyta2 161 TTMSGQTVEVLNTDAEGRLVLCDVLTYVE-RFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRA 239 (325) T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHGG-GGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHHHHHTCCE T ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHH-HHCCCEEECCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCC T ss_conf 63699478763167531100167899998-60975023034654600042157424762251677889999999837843 Q ss_pred CCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 76776867888617986417018887467999999998723886769994000011678888889986543589999999 Q gi|254780392|r 409 WRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEFV 488 (494) Q Consensus 409 w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~~ 488 (494) ||||+|++|+++++|++|||+|++++.+|+|+||+||++||+++||+|||||||+|.++ .++|+||||||||+||| T Consensus 240 w~lPl~~~~~~~~~S~~ADl~n~~~~~~g~~~aA~FL~~Fv~~~~w~HlDIAg~a~~~~----~~~gaTG~gvr~l~~~l 315 (325) T d1gyta2 240 WRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFL 315 (325) T ss_dssp EECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSEECG----GGCEECCTTHHHHHHHH T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC----CCCCCCCHHHHHHHHHH T ss_conf 22256576786358984521258989703789999999838998989991677776799----99995305599999999 Q ss_pred HHHC Q ss_conf 9766 Q gi|254780392|r 489 RAFY 492 (494) Q Consensus 489 ~~~~ 492 (494) ++++ T Consensus 316 ~~~~ 319 (325) T d1gyta2 316 LNRA 319 (325) T ss_dssp HHHT T ss_pred HHHH T ss_conf 9986 |
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
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>d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
---|
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
---|
Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asi | ||
1gyt_A_165-503 | 339 | (A:165-503) Cytosol aminopeptidase; hydrolase, DNA | 1e-101 | |
3kr4_A_194-528 | 335 | (A:194-528) M17 leucyl aminopeptidase; protease, h | 1e-101 | |
2hc9_A_155-491 | 337 | (A:155-491) Leucine aminopeptidase 1; zinc, carbon | 1e-100 | |
3ij3_A_158-482 | 325 | (A:158-482) Cytosol aminopeptidase; PEPB, peptidas | 2e-98 | |
3kzw_A_213-515 | 303 | (A:213-515) Cytosol aminopeptidase; cytoplasm, hyd | 6e-98 | |
1lam_A_177-484 | 308 | (A:177-484) Leucine aminopeptidase; exopeptidase, | 6e-96 | |
3kzw_A_1-212 | 212 | (A:1-212) Cytosol aminopeptidase; cytoplasm, hydro | 7e-18 | |
1gyt_A_1-164 | 164 | (A:1-164) Cytosol aminopeptidase; hydrolase, DNA r | 3e-13 | |
3ij3_A_1-157 | 157 | (A:1-157) Cytosol aminopeptidase; PEPB, peptidase | 7e-07 | |
1lam_A_1-176 | 176 | (A:1-176) Leucine aminopeptidase; exopeptidase, me | 2e-12 |
>1gyt_A (A:165-503) Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli}Length = 339 | Back alignment and structure |
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Score = 365 bits (937), Expect = e-101 Identities = 145/333 (43%), Positives = 213/333 (63%), Gaps = 9/333 (2%) Query: 166 QVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKL---ESLGVAVEILDKEAMHKL 222 + + ++ G+ A+D+ N P N+ Q R+L S V ++ ++ M +L Sbjct: 8 RAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKEL 67 Query: 223 GMNALLAVAQGSSRPPYLAVMKWEGGDSE-EQPLAFIGKGVVFDTGGISIKPSHGMEEMK 281 GM++ LAV QGS ++V++++G SE +P+ +GKG+ FD+GGISIKPS GM+EMK Sbjct: 68 GMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMK 127 Query: 282 GDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINT 341 D+ GAAAV G++ ++AE + IN IGVLA ENMPG A RPGD++ +MSGQT+EV+NT Sbjct: 128 YDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNT 187 Query: 342 DAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSG 401 DAEGRL+L D L Y + P +ID+ATLTGA V++LG+ GL AN++ LA +L+++ Sbjct: 188 DAEGRLVLCDVLTYV-ERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAAS 246 Query: 402 LSTGELLWRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAG 461 +G+ WR+P+ +EY + +ES FADM NIGGR G+I A FL +F + +WAH+DIAG Sbjct: 247 EQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAG 306 Query: 462 VATGGYPKEINQSWASGFGVRLLDEFVRAFYEK 494 A + A+G V LL +F+ Sbjct: 307 TAWRSGKAK----GATGRPVALLAQFLLNRAGF 335 |
>3kr4_A (A:194-528) M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A*Length = 335 | Back alignment and structure |
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>2hc9_A (A:155-491) Leucine aminopeptidase 1; zinc, carbonate, structural genomics, PSI, protein structure initiative; 1.85A {Caenorhabditis elegans} PDB: 2hb6_ALength = 337 | Back alignment and structure |
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>3ij3_A (A:158-482) Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}Length = 325 | Back alignment and structure |
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>3kzw_A (A:213-515) Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}Length = 303 | Back alignment and structure |
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>1lam_A (A:177-484) Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus}Length = 308 | Back alignment and structure |
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>3kzw_A (A:1-212) Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}Length = 212 | Back alignment and structure |
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>1gyt_A (A:1-164) Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli}Length = 164 | Back alignment and structure |
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>3ij3_A (A:1-157) Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}Length = 157 | Back alignment and structure |
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>1lam_A (A:1-176) Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus}Length = 176 | Back alignment and structure |
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Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 494 | leucyl aminopeptidase [Candidatus Liberibacter asiaticu | ||
3kr4_A_194-528 | 335 | M17 leucyl aminopeptidase; protease, hydrolase; HE | 100.0 | |
1gyt_A_165-503 | 339 | Cytosol aminopeptidase; hydrolase, DNA recombinati | 100.0 | |
3ij3_A_158-482 | 325 | Cytosol aminopeptidase; PEPB, peptidase M17 family | 100.0 | |
2hc9_A_155-491 | 337 | Leucine aminopeptidase 1; zinc, carbonate, structu | 100.0 | |
3kzw_A_213-515 | 303 | Cytosol aminopeptidase; cytoplasm, hydrolase, mang | 100.0 | |
1lam_A_177-484 | 308 | Leucine aminopeptidase; exopeptidase, metallopepti | 100.0 | |
3kzw_A_1-212 | 212 | Cytosol aminopeptidase; cytoplasm, hydrolase, mang | 99.94 | |
1lam_A_1-176 | 176 | Leucine aminopeptidase; exopeptidase, metallopepti | 99.83 | |
1gyt_A_1-164 | 164 | Cytosol aminopeptidase; hydrolase, DNA recombinati | 99.79 | |
3ij3_A_1-157 | 157 | Cytosol aminopeptidase; PEPB, peptidase M17 family | 99.48 | |
3kr4_A_1-193 | 193 | M17 leucyl aminopeptidase; protease, hydrolase; HE | 97.72 | |
3isz_A_1-177_299-377 | 256 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 92.47 | |
3gb0_A_1-176_296-373 | 254 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 91.92 | |
1fno_A_1-205_328-417 | 295 | Peptidase T; metallo peptidase, protease, zinc, hy | 90.81 | |
2pok_A_1-214_440-481 | 256 | Peptidase, M20/M25/M40 family; M20 family peptidas | 91.78 |
>3kr4_A (A:194-528) M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* | Back alignment and structure |
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Probab=100.00 E-value=0 Score=966.31 Aligned_cols=324 Identities=38% Similarity=0.607 Sum_probs=314.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEE Q ss_conf 9999999999999998642021254030299999999986-113321000011100013458988742025778506886 Q gi|254780392|r 165 SQVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVM 243 (494) Q Consensus 165 ~~~i~~~~aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l 243 (494) ++.+++++++++|+++||||+|+|||+|||++||++++++ +++|++|+|+++++|+++|||+|++|||||.+|||||+| T Consensus 2 e~~~~~~~~~a~g~~lARdL~n~P~N~ltP~~~a~~a~~~~~~~gv~v~V~~~~~l~~~gmg~~laVg~GS~~~p~li~l 81 (335) T 3kr4_A 2 KEEVEKARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHL 81 (335) T ss_dssp THHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEE T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCEEEEECCCCCCCEEEEE T ss_conf 99999999999999999987268962149999999999999872987999639999867998468761478898727999 Q ss_pred ECCCCCCCCCCEEEEECCEEECCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCC Q ss_conf 20578865651266302112006631003--33320023221123568999999998708-7872899864102668999 Q gi|254780392|r 244 KWEGGDSEEQPLAFIGKGVVFDTGGISIK--PSHGMEEMKGDLGGAAAVTGLLHVLAERK-AKINAIGVLALVENMPGSS 320 (494) Q Consensus 244 ~Y~g~~~~~~piaLVGKGvTFDtGGislK--p~~~M~~Mk~DM~GaAav~g~~~aia~l~-~~v~v~~~~~~~EN~~~~~ 320 (494) +|+|++++++||+|||||||||||||||| |+.+|++||+||||||+|+|+|+++++|+ +|+||++++|+||||||++ T Consensus 82 ~Y~g~~~~~~~i~LVGKGiTFDtGG~slK~~P~~~M~~Mk~DM~GAAaVlga~~aia~l~~l~vnv~a~l~~~EN~i~~~ 161 (335) T 3kr4_A 82 TYKSKGDVKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCENMVSKN 161 (335) T ss_dssp EEECSSCCCEEEEEEEEEEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHCCSSEEEEEEEEEEEECCSTT T ss_pred EECCCCCCCCCEEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCC T ss_conf 97136777886665566668765885356686104787650143489999999999984358813899733443067998 Q ss_pred CCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHH Q ss_conf 74707763024895888634786640365236788752079613552111200235431776057870898999999998 Q gi|254780392|r 321 AQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSS 400 (494) Q Consensus 321 a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a 400 (494) |||||||||+||||||||.||||||||||||+|+|| ++|+|+.|||+|||||||++|||++++|+|||||++++++++| T Consensus 162 a~kPgDVi~s~nGkTVEI~NTDAEGRLvLADal~~a-~~~~p~~iiDiATLTGa~~~ALG~~~ag~~sn~~~l~~~l~~a 240 (335) T 3kr4_A 162 SYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYA-EKLGVDYIVDIATLTGAMLYSLGTSYAGVFGNNEELINKILQS 240 (335) T ss_dssp SCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHH-HHTCCSEEEEEECCCTTHHHHTTTTCEEEEESCHHHHHHHHHH T ss_pred CCCCCCEEECCCCCEEEEECCCCCCEEEEEHHHHHH-HCCCCCCEEEEHHHHHHHHECCCCCEEEEEECCHHHHHHHHHH T ss_conf 879988116169967986348852004540288897-5339950111011221302404896179996999999999999 Q ss_pred HHHHCCCCCCCCCCHHHHHHHCCCCCCEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC Q ss_conf 99856971767768678886179864170188-87467999999998723886769994000011678888889986543 Q gi|254780392|r 401 GLSTGELLWRMPMNEEYNKLIESKFADMKNIG-GRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGF 479 (494) Q Consensus 401 ~~~~ge~~w~lPl~~~y~~~~~s~~AD~~n~~-~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~ 479 (494) |+.+||++||||||++|+++++|++||++|++ ++.||+|+||+||++||+++||+|||||||+| .+.|+|+||| T Consensus 241 g~~~ge~~W~lPl~~~y~~~i~s~~AD~~N~~~~~~~g~~~Aa~FL~~Fv~~~~W~HlDIAg~a~-----~~~~~g~TG~ 315 (335) T 3kr4_A 241 SKTSNEPVWWLPIINEYRATLNSKYADINQISSSVKASSIVASLFLKEFVQNTAWAHIDIAGVSW-----NFKARKPKGF 315 (335) T ss_dssp HHHHTCCEEECCCCGGGGGGGCCSSSSEESSCSSCCCHHHHHHHHHHTTCSSSEEEEEECTTTSE-----ETTTTEECCT T ss_pred HHHHCCCEEECCCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC-----CCCCCCCCCH T ss_conf 99849976408998888977699688741789689724179999999767997989995687588-----8999895413 Q ss_pred CHHHHHHHHHHHCCC Q ss_conf 589999999976689 Q gi|254780392|r 480 GVRLLDEFVRAFYEK 494 (494) Q Consensus 480 ~vr~l~~~~~~~~~~ 494 (494) |||||+||++++.++ T Consensus 316 gvr~L~~~l~~~a~~ 330 (335) T 3kr4_A 316 GVRLLTEFVLNDALH 330 (335) T ss_dssp THHHHHHHHHHC--- T ss_pred HHHHHHHHHHHHHHH T ss_conf 199999999852433 |
>1gyt_A (A:165-503) Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} | Back alignment and structure |
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>3ij3_A (A:158-482) Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} | Back alignment and structure |
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>2hc9_A (A:155-491) Leucine aminopeptidase 1; zinc, carbonate, structural genomics, PSI, protein structure initiative; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A | Back alignment and structure |
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>3kzw_A (A:213-515) Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} | Back alignment and structure |
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>1lam_A (A:177-484) Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus} | Back alignment and structure |
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>3kzw_A (A:1-212) Cytosol aminopeptidase; cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} | Back alignment and structure |
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>1lam_A (A:1-176) Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (alpha-aminoacylpeptide); 1.60A {Bos taurus} | Back alignment and structure |
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>1gyt_A (A:1-164) Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} | Back alignment and structure |
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>3ij3_A (A:1-157) Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962, cytoplasm, hydrolase, manganese, metal-binding, protease, structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} | Back alignment and structure |
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>3kr4_A (A:1-193) M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* | Back alignment and structure |
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>3isz_A (A:1-177,A:299-377) Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2; 2.00A {Haemophilus influenzae rd KW20} PDB: 3ic1_A | Back alignment and structure |
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>3gb0_A (A:1-176,A:296-373) Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M40, structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
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>1fno_A (A:1-205,A:328-417) Peptidase T; metallo peptidase, protease, zinc, hydrolase; 2.40A {Salmonella typhimurium} | Back alignment and structure |
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>2pok_A (A:1-214,A:440-481) Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural genomics, PSI-2; HET: BGC; 1.90A {Streptococcus pneumoniae TIGR4} | Back alignment and structure |
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