254780446
hypothetical protein CLIBASIA_01655
| GeneID in NCBI database: | 8209432 | Locus tag: | CLIBASIA_01655 |
| Protein GI in NCBI database: | 254780446 | Protein Accession: | YP_003064859.1 |
| Gene range: | -(358257, 358772) | Protein Length: | 171aa |
| Gene description: | hypothetical protein | ||
| COG prediction: | none | ||
| KEGG prediction: | hypothetical protein | ||
| SEED prediction: | hypothetical protein | ||
| Pathway involved in KEGG: | not defined | ||
| Subsystem involved in SEED: | - none - | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 171 | hypothetical protein CLIBASIA_01655 [Candidatus Liberib | |||
| 315122105 | 179 | hypothetical protein CKC_01775 [Candidatus Liberibacter | 1 | 1e-64 | |
| 28198734 | 168 | hypothetical protein PD0829 [Xylella fastidiosa Temecul | 1 | 3e-42 | |
| 187477982 | 174 | phage protein [Bordetella avium 197N] Length = 174 | 1 | 5e-38 | |
| 332969447 | 240 | hypothetical protein HMPREF0476_1333 [Kingella kingae A | 1 | 6e-28 | |
| 298369422 | 251 | conserved hypothetical protein [Neisseria sp. oral taxo | 1 | 4e-26 | |
| 15838567 | 130 | hypothetical protein XF1973 [Xylella fastidiosa 9a5c] L | 1 | 5e-25 | |
| 21232575 | 333 | hypothetical protein XCC3145 [Xanthomonas campestris pv | 2 | 4e-13 | |
| 254469764 | 433 | conserved hypothetical protein [Pseudovibrio sp. JE062] | 2 | 7e-06 | |
| 285019902 | 346 | hypothetical protein XALc_3140 [Xanthomonas albilineans | 2 | 8e-04 | |
| 270158753 | 175 | conserved hypothetical protein [Legionella longbeachae | 2 | 0.002 |
| >gi|315122105|ref|YP_004062594.1| hypothetical protein CKC_01775 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 179 | Back alignment and organism information |
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Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
Query: 1 MISAESDTS-QNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGY 59
++ AES+ + Q +TIVLSQ IGL FAHRLL VFDSNK FVAELDGLVVNK+GK KPIGY
Sbjct: 9 VVKAESNCNVQGYTIVLSQWDIGLIFAHRLLTVFDSNKRFVAELDGLVVNKNGKIKPIGY 68
Query: 60 LPSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGI 119
L SDRLKVFEFK P LY+EDQEQVVL SS++E VM +W+ A+ K+ILNEK +PYPFLG+
Sbjct: 69 LRSDRLKVFEFKSPHLYREDQEQVVLFSSTKEYVMRKWHLALRAKDILNEKYLPYPFLGM 128
Query: 120 GKNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIRC 170
G+NSNSVASTLI+CMGL+EL IP+AKIAPYQG ILLDD I +IQN+ I C
Sbjct: 129 GENSNSVASTLIKCMGLEELEIPHAKIAPYQGRILLDDSVITQIQNSRIHC 179
|
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|28198734|ref|NP_779048.1| hypothetical protein PD0829 [Xylella fastidiosa Temecula1] Length = 168 | Back alignment and organism information |
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| >gi|187477982|ref|YP_786006.1| phage protein [Bordetella avium 197N] Length = 174 | Back alignment and organism information |
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| >gi|332969447|gb|EGK08469.1| hypothetical protein HMPREF0476_1333 [Kingella kingae ATCC 23330] Length = 240 | Back alignment and organism information |
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| >gi|298369422|ref|ZP_06980740.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] Length = 251 | Back alignment and organism information |
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| >gi|15838567|ref|NP_299255.1| hypothetical protein XF1973 [Xylella fastidiosa 9a5c] Length = 130 | Back alignment and organism information |
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| >gi|21232575|ref|NP_638492.1| hypothetical protein XCC3145 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 333 | Back alignment and organism information |
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| >gi|254469764|ref|ZP_05083169.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 433 | Back alignment and organism information |
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| >gi|285019902|ref|YP_003377613.1| hypothetical protein XALc_3140 [Xanthomonas albilineans GPE PC73] Length = 346 | Back alignment and organism information |
|---|
| >gi|270158753|ref|ZP_06187410.1| conserved hypothetical protein [Legionella longbeachae D-4968] Length = 175 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLAST against CDD database part II
No hit with e-value below 0.005
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
No hit with probability above 90.00
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
No homologous structure with e-value below 0.005
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 90.00
Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 90.00
Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
No hit with e-value below 0.005
Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
No hit with probability higher than 90.00