254780836
putative type I restriction-modification system DNA methylase
GeneID in NCBI database: | 8209847 | Locus tag: | CLIBASIA_03655 |
Protein GI in NCBI database: | 254780836 | Protein Accession: | YP_003065249.1 |
Gene range: | +(805395, 807419) | Protein Length: | 674aa |
Gene description: | putative type I restriction-modification system DNA methylase | ||
COG prediction: | [V] Type I restriction-modification system methyltransferase subunit | ||
KEGG prediction: | putative type I restriction-modification system DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] | ||
SEED prediction: | Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | Restriction-Modification System;
Type I Restriction-Modification | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 674 | putative type I restriction-modification system DNA met | |||
152969515 | 675 | DNA methylase M, host modification [Klebsiella pneumoni | 1 | 0.0 | |
152973655 | 684 | putative type I restriction-modification system DNA met | 1 | 0.0 | |
78357909 | 675 | type I restriction-modification system DNA methylase [D | 1 | 0.0 | |
152998551 | 675 | N-6 DNA methylase [Shewanella baltica OS185] Length = 6 | 1 | 0.0 | |
310830281 | 673 | type I restriction-modification system DNA methylase, p | 1 | 0.0 | |
260427933 | 673 | N-6 DNA methylase [Citreicella sp. SE45] Length = 673 | 1 | 0.0 | |
21243627 | 685 | type I restriction-modification system DNA methylase [X | 1 | 0.0 | |
110681176 | 677 | type I restriction-modification system DNA methylase, p | 1 | 0.0 | |
169634729 | 671 | putative type I restriction-modification system DNA met | 1 | 0.0 | |
229520169 | 660 | type I restriction-modification system DNA-methyltransf | 1 | 0.0 |
>gi|152969515|ref|YP_001334624.1| DNA methylase M, host modification [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 675 | Back alignment and organism information |
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Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/675 (78%), Positives = 593/675 (87%), Gaps = 1/675 (0%) Query: 1 MTEFTGSAASLANFIWKNAEDLWGDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYL 60 M EFTGSAAS A+FIWKNAEDLWGDFKHTDFGK+ILPFTLLRRLECALEPTR AVRE + Sbjct: 1 MNEFTGSAASQADFIWKNAEDLWGDFKHTDFGKIILPFTLLRRLECALEPTREAVREAHD 60 Query: 61 AFGGSNIDLESFVK-VAGYSFYNTSEYSLSTLGSTNTRNNLESYIASFSDNAKAIFEDFD 119 AF ++++L++ ++ A Y FYNTSEYSL TLGST TR NLE YIA FSDNA+AIFE+F+ Sbjct: 61 AFKDADVELDTILRSTAEYPFYNTSEYSLGTLGSTKTRRNLEDYIALFSDNARAIFEEFE 120 Query: 120 FSSTIARLEKAGLLYKICKNFSGIELHPDTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMT 179 F +T+ RLEKAGLLYKIC+NF+ I+LHPD VPDRVMSNIYEHLIRRFG+EV+EGAEDFMT Sbjct: 121 FGNTVIRLEKAGLLYKICQNFAKIDLHPDVVPDRVMSNIYEHLIRRFGAEVNEGAEDFMT 180 Query: 180 PRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPI 239 PRD+VHLATALLLDPDDALF+ SPG+IRTLYDPTCGTGGFLTDAMNHV D G+ KIPP+ Sbjct: 181 PRDIVHLATALLLDPDDALFEASPGLIRTLYDPTCGTGGFLTDAMNHVGDYGNRDKIPPV 240 Query: 240 LVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNP 299 LVPHGQELEPETHAVCVAGMLIRRLESDP RDLSKNI+QGSTLS D F G+RFHYCLSNP Sbjct: 241 LVPHGQELEPETHAVCVAGMLIRRLESDPGRDLSKNIRQGSTLSNDQFAGERFHYCLSNP 300 Query: 300 PFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIV 359 PFGKKWEKDK AVE EHK GELGRFGPGLPKISDGSMLFLMHLA+KLELP NGGGRAAIV Sbjct: 301 PFGKKWEKDKTAVEAEHKKGELGRFGPGLPKISDGSMLFLMHLASKLELPINGGGRAAIV 360 Query: 360 LSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTEERR 419 LS SPLFNG A SGESEIRRWLLE+DLIEAIVALPTDLFFRTNIATYLWILSN+K +ER+ Sbjct: 361 LSGSPLFNGGAASGESEIRRWLLEDDLIEAIVALPTDLFFRTNIATYLWILSNKKPQERK 420 Query: 420 GKVQLINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSRENGKFSRMLDYRTFGYRRIK 479 GKVQLINATDLWTSIRNEG KRRI++D+QRRQILDIY + E G SRMLDYRTFGYRRI+ Sbjct: 421 GKVQLINATDLWTSIRNEGNKRRIVSDEQRRQILDIYAAGETGALSRMLDYRTFGYRRIR 480 Query: 480 VLRPLRMSFILDKTGLARLEADITWRKLSPLHQSFWLDILKPMMQQIYPYGWAESFVKES 539 VLRPLRM+ LDK G+ RLEA+ W KLS HQ+FW + LKP++ Q PY WAE+FV S Sbjct: 481 VLRPLRMTLELDKVGMERLEAEAAWEKLSDAHQTFWREALKPLIGQTQPYSWAETFVSNS 540 Query: 540 IKSNEAKTLKVKASKSFIVAFINAFGRKDPRADPVTDVNGEWIPDTNLTEYENVPYLESI 599 IKS+EAK LKVK++K+ I A INAFG KDP+A+PVTD NGE +PDT+LT+YENVPYLE I Sbjct: 541 IKSDEAKQLKVKSNKTLITALINAFGHKDPKAEPVTDSNGELVPDTDLTDYENVPYLEDI 600 Query: 600 QDYFVREVSPHVPDAYIDKIFIDEKDKEIGRVGYEINFNRFFYQYQPSRKLQDIDAELKG 659 DYF REV PHVPDA++D+ F D +D ++GRVGYEINFNRFFYQYQP RKL DID +LK Sbjct: 601 DDYFAREVLPHVPDAWLDESFTDARDGQLGRVGYEINFNRFFYQYQPPRKLHDIDEDLKQ 660 Query: 660 VEAQIATLLEEMATE 674 VEA+IA LL E+A+E Sbjct: 661 VEAEIAALLAEVASE 675 |
Species: Klebsiella pneumoniae Genus: Klebsiella Family: Enterobacteriaceae Order: Enterobacteriales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|152973655|ref|YP_001338695.1| putative type I restriction-modification system DNA methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 684 | Back alignment and organism information |
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>gi|78357909|ref|YP_389358.1| type I restriction-modification system DNA methylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 675 | Back alignment and organism information |
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>gi|152998551|ref|YP_001355472.1| N-6 DNA methylase [Shewanella baltica OS185] Length = 675 | Back alignment and organism information |
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>gi|310830281|ref|YP_003965381.1| type I restriction-modification system DNA methylase, putative [Ketogulonicigenium vulgare Y25] Length = 673 | Back alignment and organism information |
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>gi|260427933|ref|ZP_05781912.1| N-6 DNA methylase [Citreicella sp. SE45] Length = 673 | Back alignment and organism information |
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>gi|21243627|ref|NP_643209.1| type I restriction-modification system DNA methylase [Xanthomonas axonopodis pv. citri str. 306] Length = 685 | Back alignment and organism information |
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>gi|110681176|ref|YP_684183.1| type I restriction-modification system DNA methylase, putative [Roseobacter denitrificans OCh 114] Length = 677 | Back alignment and organism information |
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>gi|169634729|ref|YP_001708465.1| putative type I restriction-modification system DNA methylase (HsdM) [Acinetobacter baumannii SDF] Length = 671 | Back alignment and organism information |
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>gi|229520169|ref|ZP_04409596.1| type I restriction-modification system DNA-methyltransferase subunit M [Vibrio cholerae TM 11079-80] Length = 660 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 674 | putative type I restriction-modification system DNA met | ||
pfam02384 | 312 | pfam02384, N6_Mtase, N-6 DNA Methylase | 1e-45 | |
TIGR00497 | 501 | TIGR00497, hsdM, type I restriction system adenine meth | 2e-22 | |
pfam12161 | 92 | pfam12161, HsdM_N, HsdM N-terminal domain | 1e-07 | |
COG0286 | 489 | COG0286, HsdM, Type I restriction-modification system m | 7e-51 |
>gnl|CDD|111293 pfam02384, N6_Mtase, N-6 DNA Methylase | Back alignment and domain information |
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>gnl|CDD|129588 TIGR00497, hsdM, type I restriction system adenine methylase (hsdM) | Back alignment and domain information |
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>gnl|CDD|152596 pfam12161, HsdM_N, HsdM N-terminal domain | Back alignment and domain information |
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>gnl|CDD|30634 COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms] | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 674 | putative type I restriction-modification system DNA met | ||
COG0286 | 489 | HsdM Type I restriction-modification system methyltrans | 100.0 | |
TIGR00497 | 516 | hsdM type I restriction-modification system, M subunit; | 100.0 | |
pfam02384 | 312 | N6_Mtase N-6 DNA Methylase. Restriction-modification (R | 100.0 | |
TIGR02987 | 603 | met_A_Alw26 type II restriction m6 adenine DNA methyltr | 99.77 | |
COG1041 | 347 | Predicted DNA modification methylase [DNA replication, | 99.37 | |
COG4889 | 1518 | Predicted helicase [General function prediction only] | 99.27 | |
PRK09329 | 285 | N5-glutamine S-adenosyl-L-methionine-dependent methyltr | 98.79 | |
COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal structu | 98.41 | |
PHA02056 | 279 | putative methyltransferase | 98.03 | |
PRK05031 | 363 | tRNA (uracil-5-)-methyltransferase; Validated | 97.33 | |
PRK03522 | 375 | rumB 23S rRNA methyluridine methyltransferase; Reviewed | 97.17 | |
pfam05958 | 353 | tRNA_U5-meth_tr tRNA (Uracil-5-)-methyltransferase. Thi | 97.06 | |
PRK05134 | 233 | 3-demethylubiquinone-9 3-methyltransferase; Provisional | 97.04 | |
COG0827 | 381 | Adenine-specific DNA methylase [DNA replication, recomb | 96.86 | |
COG1092 | 393 | Predicted SAM-dependent methyltransferases [General fun | 96.67 | |
PRK13168 | 440 | rumA 23S rRNA 5-methyluridine methyltransferase; Review | 96.64 | |
PTZ00338 | 296 | dimethyladenosine transferase; Provisional | 95.91 | |
PRK00274 | 267 | ksgA dimethyladenosine transferase; Reviewed | 95.75 | |
pfam01170 | 171 | UPF0020 Putative RNA methylase family UPF0020. This dom | 99.49 | |
COG0116 | 381 | Predicted N6-adenine-specific DNA methylase [DNA replic | 99.21 | |
pfam09445 | 165 | Methyltransf_15 RNA cap guanine-N2 methyltransferase. R | 98.33 | |
KOG3420 | 185 | consensus | 97.98 | |
PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltransfer | 97.68 | |
pfam01209 | 233 | Ubie_methyltran ubiE/COQ5 methyltransferase family. | 97.63 | |
KOG2904 | 328 | consensus | 97.4 | |
PRK10909 | 198 | rsmD 16S rRNA m(2)G966-methyltransferase; Provisional | 97.39 | |
pfam06325 | 294 | PrmA Ribosomal protein L11 methyltransferase (PrmA). Th | 97.37 | |
PRK06202 | 233 | hypothetical protein; Provisional | 97.3 | |
PRK00517 | 298 | prmA ribosomal protein L11 methyltransferase; Reviewed | 97.01 | |
pfam03602 | 181 | Cons_hypoth95 Conserved hypothetical protein 95. | 96.97 | |
PRK11727 | 326 | putative SAM-dependent methyltransferase; Provisional | 96.85 | |
pfam07021 | 193 | MetW Methionine biosynthesis protein MetW. This family | 96.57 | |
KOG2187 | 534 | consensus | 96.56 | |
COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, ribo | 96.44 | |
pfam10672 | 286 | Methyltrans_SAM S-adenosylmethionine-dependent methyltr | 96.21 | |
COG2520 | 341 | Predicted methyltransferase [General function predictio | 96.19 | |
COG0742 | 187 | N6-adenine-specific methylase [DNA replication, recombi | 96.19 | |
TIGR02085 | 386 | meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase R | 95.95 | |
TIGR01934 | 242 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis meth | 95.93 | |
pfam00398 | 258 | RrnaAD Ribosomal RNA adenine dimethylase. | 95.61 | |
COG0030 | 259 | KsgA Dimethyladenosine transferase (rRNA methylation) [ | 95.41 | |
TIGR00536 | 311 | hemK_fam methyltransferase, HemK family; InterPro: IPR0 | 95.21 | |
TIGR00406 | 330 | prmA ribosomal protein L11 methyltransferase; InterPro: | 94.74 | |
COG3129 | 292 | Predicted SAM-dependent methyltransferase [General func | 94.66 | |
COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related methyl | 94.5 | |
PRK05785 | 225 | hypothetical protein; Provisional | 93.56 | |
TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methylt | 93.46 | |
pfam01135 | 205 | PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransf | 93.33 | |
PRK00312 | 213 | pcm protein-L-isoaspartate O-methyltransferase; Reviewe | 92.49 | |
PRK11036 | 256 | putative metallothionein SmtA; Provisional | 91.69 | |
pfam12161 | 92 | HsdM_N HsdM N-terminal domain. This domain is found at | 99.42 | |
TIGR03534 | 251 | RF_mod_HemK protein-(glutamine-N5) methyltransferase, r | 99.04 | |
PRK09328 | 277 | N5-glutamine S-adenosyl-L-methionine-dependent methyltr | 98.86 | |
COG2890 | 280 | HemK Methylase of polypeptide chain release factors [Tr | 98.73 | |
PRK10901 | 428 | 16S rRNA methyltransferase B; Provisional | 96.76 | |
PRK01683 | 252 | trans-aconitate 2-methyltransferase; Provisional | 96.52 | |
pfam01189 | 277 | Nol1_Nop2_Fmu NOL1/NOP2/sun family. | 96.26 | |
PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provi | 95.69 | |
KOG1540 | 296 | consensus | 95.07 | |
TIGR01983 | 275 | UbiG ubiquinone biosynthesis O-methyltransferase; Inter | 94.73 | |
PRK11933 | 471 | yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Revi | 94.15 | |
COG0144 | 355 | Sun tRNA and rRNA cytosine-C5-methylases [Translation, | 92.02 | |
TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransferase, | 98.96 | |
PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent methyltr | 98.92 | |
KOG2671 | 421 | consensus | 98.65 | |
pfam02475 | 199 | Met_10 Met-10+ like-protein. The methionine-10 mutant a | 98.39 | |
pfam03848 | 192 | TehB Tellurite resistance protein TehB. | 90.79 | |
pfam05175 | 170 | MTS Methyltransferase small domain. This domain is foun | 98.95 | |
PRK01544 | 503 | bifunctional N5-glutamine S-adenosyl-L-methionine-depen | 98.86 | |
COG4123 | 248 | Predicted O-methyltransferase [General function predict | 98.42 | |
PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provi | 98.37 | |
COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ribosom | 98.06 | |
cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methyltran | 97.78 | |
PRK11873 | 258 | arsM arsenite S-adenosylmethyltransferase; Reviewed | 97.31 | |
smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (PKS) e | 96.6 | |
pfam08241 | 95 | Methyltransf_11 Methyltransferase domain. Members of th | 95.36 | |
KOG1270 | 282 | consensus | 94.89 | |
pfam08242 | 98 | Methyltransf_12 Methyltransferase domain. Members of th | 94.84 | |
PRK11783 | 716 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | 98.67 | |
TIGR02081 | 205 | metW methionine biosynthesis protein MetW; InterPro: IP | 97.09 | |
TIGR00095 | 210 | TIGR00095 putative methyltransferase; InterPro: IPR0043 | 90.27 | |
pfam07669 | 106 | Eco57I Eco57I restriction endonuclease. Homologues of t | 98.42 | |
pfam11599 | 249 | AviRa RRNA methyltransferase AviRa. This family of prot | 98.22 | |
pfam01555 | 221 | N6_N4_Mtase DNA methylase. Members of this family are D | 96.92 | |
PRK07402 | 196 | precorrin-6B methylase; Provisional | 95.03 | |
PRK08287 | 186 | cobalt-precorrin-6Y C(15)-methyltransferase; Validated | 94.96 | |
TIGR00537 | 183 | hemK_rel_arch methylase, putative; InterPro: IPR004557 | 97.58 | |
pfam05971 | 254 | Methyltransf_10 Protein of unknown function (DUF890). T | 97.45 | |
PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 96.36 | |
PRK08317 | 241 | hypothetical protein; Provisional | 97.37 | |
PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 95.93 | |
COG4106 | 257 | Tam Trans-aconitate methyltransferase [General function | 93.49 | |
PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provisional | 93.37 | |
TIGR01177 | 358 | TIGR01177 conserved hypothetical protein TIGR01177; Int | 97.14 | |
COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone biosy | 96.77 | |
COG2265 | 432 | TrmA SAM-dependent methyltransferases related to tRNA ( | 95.33 | |
PRK11524 | 284 | putative methyltransferase; Provisional | 96.42 | |
PRK13699 | 227 | putative methylase; Provisional | 96.31 | |
pfam03291 | 327 | Pox_MCEL mRNA capping enzyme. This family of enzymes ar | 92.15 | |
TIGR00479 | 434 | rumA 23S rRNA (uracil-5-)-methyltransferase RumA; Inter | 91.36 | |
PRK09522 | 531 | bifunctional anthranilate synthase/anthranilate phospho | 90.28 |
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms] | Back alignment and domain information |
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>TIGR00497 hsdM type I restriction-modification system, M subunit; InterPro: IPR004546 There are four classes of restriction endonucleases: types I, II,III and IV | Back alignment and domain information |
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>pfam02384 N6_Mtase N-6 DNA Methylase | Back alignment and domain information |
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>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family; InterPro: IPR014329 Members of this entry are the m6-adenine DNA methyltransferase protein, or a fusion protein that also carries m5 cytosine methyltransferase activity of type II restriction systems of the Alw26I/Eco31I/Esp3I family | Back alignment and domain information |
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>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
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>COG4889 Predicted helicase [General function prediction only] | Back alignment and domain information |
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>PRK09329 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
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>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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>PHA02056 putative methyltransferase | Back alignment and domain information |
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>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated | Back alignment and domain information |
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>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
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>pfam05958 tRNA_U5-meth_tr tRNA (Uracil-5-)-methyltransferase | Back alignment and domain information |
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>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional | Back alignment and domain information |
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>COG0827 Adenine-specific DNA methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
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>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
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>PRK13168 rumA 23S rRNA 5-methyluridine methyltransferase; Reviewed | Back alignment and domain information |
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>PTZ00338 dimethyladenosine transferase; Provisional | Back alignment and domain information |
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>PRK00274 ksgA dimethyladenosine transferase; Reviewed | Back alignment and domain information |
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>pfam01170 UPF0020 Putative RNA methylase family UPF0020 | Back alignment and domain information |
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>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
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>pfam09445 Methyltransf_15 RNA cap guanine-N2 methyltransferase | Back alignment and domain information |
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>KOG3420 consensus | Back alignment and domain information |
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>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
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>pfam01209 Ubie_methyltran ubiE/COQ5 methyltransferase family | Back alignment and domain information |
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>KOG2904 consensus | Back alignment and domain information |
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>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional | Back alignment and domain information |
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>pfam06325 PrmA Ribosomal protein L11 methyltransferase (PrmA) | Back alignment and domain information |
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>PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
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>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
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>pfam03602 Cons_hypoth95 Conserved hypothetical protein 95 | Back alignment and domain information |
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>PRK11727 putative SAM-dependent methyltransferase; Provisional | Back alignment and domain information |
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>pfam07021 MetW Methionine biosynthesis protein MetW | Back alignment and domain information |
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>KOG2187 consensus | Back alignment and domain information |
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>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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>pfam10672 Methyltrans_SAM S-adenosylmethionine-dependent methyltransferase | Back alignment and domain information |
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>COG2520 Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
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>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
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>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB; InterPro: IPR011825 This family consists of RNA methyltransferases designated RumB, formerly YbjF | Back alignment and domain information |
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>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities | Back alignment and domain information |
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>pfam00398 RrnaAD Ribosomal RNA adenine dimethylase | Back alignment and domain information |
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>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase | Back alignment and domain information |
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>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2 | Back alignment and domain information |
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>COG3129 Predicted SAM-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
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>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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>PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
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>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase; InterPro: IPR014122 MenG is a generic term for a methyltransferase that catalyses the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species | Back alignment and domain information |
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>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) | Back alignment and domain information |
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>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
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>PRK11036 putative metallothionein SmtA; Provisional | Back alignment and domain information |
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>pfam12161 HsdM_N HsdM N-terminal domain | Back alignment and domain information |
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>TIGR03534 RF_mod_HemK protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
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>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
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>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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>PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
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>PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
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>pfam01189 Nol1_Nop2_Fmu NOL1/NOP2/sun family | Back alignment and domain information |
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>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
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>KOG1540 consensus | Back alignment and domain information |
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>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase; InterPro: IPR010233 This entry represents an O-methyltransferase, which is believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and mitochondria (COQ3) , | Back alignment and domain information |
---|
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed | Back alignment and domain information |
---|
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
---|
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
---|
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
---|
>KOG2671 consensus | Back alignment and domain information |
---|
>pfam02475 Met_10 Met-10+ like-protein | Back alignment and domain information |
---|
>pfam03848 TehB Tellurite resistance protein TehB | Back alignment and domain information |
---|
>pfam05175 MTS Methyltransferase small domain | Back alignment and domain information |
---|
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
---|
>COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
---|
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
---|
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
---|
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
---|
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
---|
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
---|
>pfam08241 Methyltransf_11 Methyltransferase domain | Back alignment and domain information |
---|
>KOG1270 consensus | Back alignment and domain information |
---|
>pfam08242 Methyltransf_12 Methyltransferase domain | Back alignment and domain information |
---|
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
---|
>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
---|
>TIGR00095 TIGR00095 putative methyltransferase; InterPro: IPR004398 This is a family of conserved hypothetical proteins, which includes a putative methylase | Back alignment and domain information |
---|
>pfam07669 Eco57I Eco57I restriction endonuclease | Back alignment and domain information |
---|
>pfam11599 AviRa RRNA methyltransferase AviRa | Back alignment and domain information |
---|
>pfam01555 N6_N4_Mtase DNA methylase | Back alignment and domain information |
---|
>PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
---|
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
---|
>TIGR00537 hemK_rel_arch methylase, putative; InterPro: IPR004557 These proteins exhibit homology to the Saccharomyces cerevisiae (yeast) ORF YDR140w (FYV9) | Back alignment and domain information |
---|
>pfam05971 Methyltransf_10 Protein of unknown function (DUF890) | Back alignment and domain information |
---|
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
---|
>PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
---|
>PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
---|
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
---|
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
---|
>TIGR01177 TIGR01177 conserved hypothetical protein TIGR01177; InterPro: IPR005885 This family of largely hypothetical proteins is found exclusively in the Archaea and contain a putative RNA methylase domain | Back alignment and domain information |
---|
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
---|
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
---|
>PRK11524 putative methyltransferase; Provisional | Back alignment and domain information |
---|
>PRK13699 putative methylase; Provisional | Back alignment and domain information |
---|
>pfam03291 Pox_MCEL mRNA capping enzyme | Back alignment and domain information |
---|
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA; InterPro: IPR001566 This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family | Back alignment and domain information |
---|
>PRK09522 bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
---|
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 674 | putative type I restriction-modification system DNA met | ||
3khk_A | 544 | Crystal Structure Of Type-I Restriction-Modificatio | 6e-75 | |
2y7c_B | 529 | Atomic Model Of The Ocr-Bound Methylase Complex Fro | 6e-54 | |
2ar0_A | 541 | Crystal Structure Of Type I Restriction Enzyme Ecok | 1e-50 | |
2okc_A | 445 | Crystal Structure Of Type I Restriction Enzyme Stys | 7e-42 | |
3lkd_A | 542 | Crystal Structure Of The Type I Restriction-Modific | 2e-70 |
>gi|284055706|pdb|3KHK|A Chain A, Crystal Structure Of Type-I Restriction-Modification System Methylation Subunit (Mm_0429) From Methanosarchina Mazei. Length = 544 | Back alignment and structure |
Score = 287 bits (734), Expect = 6e-75, Method: Composition-based stats. Identities = 94/518 (18%), Positives = 176/518 (33%), Gaps = 95/518 (18%) Query: 8 AASLANFIWKNAEDLWGDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNI 67 L N +W+ A+ L + ++ V+L L+ + A E + + E + NI Sbjct: 10 LNDLDNQLWRAADKLRSNLDAANYKHVVLGLIFLKYVSDAFEERQQELTELFQKDDDDNI 69 Query: 68 ---------DLESFVKV------------AGYSFYNTSEYSLSTLGS------------- 93 E++ + F+ + L Sbjct: 70 YYLPREDYDSDEAYQQAIAEELEIGDYYTEKNVFWVPKTARWNKLRDVITLPTGSVIWQD 129 Query: 94 ---TNTR--------NNLESYIASFSDNAKAIFEDFDFSSTIARLEKAGLLYKICKNFSG 142 + + +N I + K I A L + FS Sbjct: 130 EQGEDVKLRSVSWLIDNAFDDIEKANPKLKGILNRISQYQL-----DADKLIGLINEFSL 184 Query: 143 IELHP--------DTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDP 194 + + ++ ++YE+ + +F + + TP+ +V L +L Sbjct: 185 TSFNNPEYNGEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEML--- 241 Query: 195 DDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVA-----DCGSHHKIPPILVPHGQELEP 249 +YDP G+GGF + + + + + +GQE P Sbjct: 242 --------EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNP 293 Query: 250 ETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGK-KWEKD 308 T + M+IR ++ + + + + D R + ++NPPF W + Sbjct: 294 TTWKLAAMNMVIRGIDFNFGK------KNADSFLDDQHPDLRADFVMTNPPFNMKDWWHE 347 Query: 309 KDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNG 368 K A + G P + + +++H+ L G A ++ + S N Sbjct: 348 KLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPT---GSMALLLANGSMSSNT 404 Query: 369 RAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTE-----ERRGKVQ 423 E EIR+ L+E DL+E +VALP LF T I +W L+ K +RRG+V Sbjct: 405 NN---EGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKNAKNGKRDRRGQVL 461 Query: 424 LINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSREN 461 I+A L R D+ +++ D + + + Sbjct: 462 FIDARKLGYMKDRV---LRDFKDEDIQKLADTFHNWQQ 496 |
gi|322812245|pdb|2Y7C|B Chain B, Atomic Model Of The Ocr-Bound Methylase Complex From The Type I Restriction-Modification Enzyme Ecoki (M2s1). Based On Fitting Into Em Map 1534. Length = 529 | Back alignment and structure |
>gi|75766307|pdb|2AR0|A Chain A, Crystal Structure Of Type I Restriction Enzyme Ecoki M Protein (Ec 2.1.1.72) (M.Ecoki) Length = 541 | Back alignment and structure |
>gi|126031631|pdb|2OKC|A Chain A, Crystal Structure Of Type I Restriction Enzyme Stysji M Protein (Np_813429.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.20 A Resolution Length = 445 | Back alignment and structure |
>gi|288563204|pdb|3LKD|A Chain A, Crystal Structure Of The Type I Restriction-Modification System Methyltransferase Subunit From Streptococcus Thermophilus, Northeast Structural Genomics Consortium Target Sur80 Length = 542 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 674 | putative type I restriction-modification system DNA met | ||
3lkd_A | 542 | Type I restriction-modification system methyltransferas | 4e-61 | |
3khk_A | 544 | Type I restriction-modification system methylation subu | 6e-57 | |
2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein; str | 7e-34 | |
2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813429.1 | 4e-30 | |
2f8l_A | 344 | Hypothetical protein LMO1582; 16411011, structural geno | 2e-26 | |
2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransferase | 1e-18 |
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} Length = 542 | Back alignment and structure |
---|
Score = 231 bits (589), Expect = 4e-61 Identities = 113/497 (22%), Positives = 196/497 (39%), Gaps = 65/497 (13%) Query: 1 MTEFTGSAASLANFIWKNAEDLWGDFKHTDFGKVILPFTLLRRLECALEPTRSAVREK-- 58 M+E T ++ SL +W +A+ L D+ +L + L + + E+ Sbjct: 1 MSETTQTSQSLYQALWNSADVLRSKMDANDYKSYLLGMVFYKYLSDKMLFFVAETMEEET 60 Query: 59 ---------YLAFGGSNIDLESFVKVA--GYSFYNTSEYSLSTLGS--TNTRNNLESYIA 105 Y + E + V S+ + + + L + LE Sbjct: 61 ESLDEALAVYRKYYEDEETHEDLLAVITDEMSYAIHPDLTFTALVERVNDGSFQLEDLAQ 120 Query: 106 SFSDNAKA------IFEDFDFSST---IARLEKAGLLYKICKNFSGIELHPDTVPDRVMS 156 F D ++ +FED D S ++ + + K + +++ ++ Sbjct: 121 GFRDIEQSDELYENLFEDIDLYSKKLGATPQKQNQTVAAVMKELAVLDVAGH--AGDMLG 178 Query: 157 NIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGT 216 + YE+LI +F ++ + A +F TP+ V L T + + TLYD T G+ Sbjct: 179 DAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGRE------DKQGFTLYDATMGS 232 Query: 217 GGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNI 276 G L +A + + +V GQEL T+ + M++ + + + + Sbjct: 233 GSLLLNAKRYSRQPQT-------VVYFGQELNTSTYNLARMNMILHGVPIENQF-----L 280 Query: 277 QQGSTLSKDLFT--GKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDG 334 TL +D T F L NPP+ KW ++ L S Sbjct: 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRF-----SPFGKLAPKSKA 335 Query: 335 SMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALP 394 FL+H L+ G AIVL LF G A E IR+ LLE I+ ++ LP Sbjct: 336 DFAFLLHGYYHLKQDN---GVMAIVLPHGVLFRGNA---EGTIRKALLEEGAIDTVIGLP 389 Query: 395 TDLFFRTNIATYLWILSNRKTEERRGKVQLINATDLWTSIRNEGKKRRIINDDQRRQILD 454 ++FF T+I T + IL +T V I+A+ + ++GK + I+ D +IL+ Sbjct: 390 ANIFFNTSIPTTVIILKKNRTNR---DVYFIDASKEF----DKGKNQNIMTDAHIEKILN 442 Query: 455 IYVSRENG-KFSRMLDY 470 Y SRE+ KF+ + + Sbjct: 443 AYKSREDIDKFAHLASF 459 |
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} Length = 544 | Back alignment and structure |
---|
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 Length = 541 | Back alignment and structure |
---|
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 Length = 445 | Back alignment and structure |
---|
>2f8l_A Hypothetical protein LMO1582; 16411011, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 Length = 344 | Back alignment and structure |
---|
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Length = 421 | Back alignment and structure |
---|
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 674 | putative type I restriction-modification system DNA met | ||
3khk_A | 544 | Type I restriction-modification system methylation subu | 100.0 | |
3lkd_A | 542 | Type I restriction-modification system methyltransferas | 100.0 | |
2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813429.1 | 100.0 | |
2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein; str | 100.0 | |
2f8l_A | 344 | Hypothetical protein LMO1582; 16411011, structural geno | 100.0 | |
2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransferase | 100.0 | |
1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, conse | 99.17 | |
3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, structura | 98.25 | |
3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxylating); | 98.22 | |
3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwi | 98.21 | |
3bt7_A | 369 | TRNA (uracil-5-)-methyltransferase; methyluridine, meth | 97.53 | |
1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modifi | 97.14 | |
1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA bind | 96.85 | |
3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, rossmann | 96.76 | |
2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopurine me | 96.67 | |
1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ERMC', | 96.63 | |
1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeMet, b | 96.59 | |
3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonicotian | 96.45 | |
3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like fold | 96.01 | |
3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, dimet | 95.9 | |
3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D | 95.81 | |
3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research cente | 99.57 | |
1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta sheet, | 99.38 | |
3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dimethyl | 98.7 | |
2qm3_A | 373 | Predicted methyltransferase; putative methyltransferase | 98.62 | |
2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase, str | 98.54 | |
1ws6_A | 171 | Methyltransferase; structural genomics, riken structura | 98.51 | |
3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine modifi | 98.5 | |
3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase; met | 98.49 | |
2esr_A | 177 | Methyltransferase; structural genomics, hypothetical pr | 98.46 | |
2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, tRNA m | 98.39 | |
2frn_A | 278 | Hypothetical protein PH0793; structural genomics, PSI, | 98.39 | |
3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent meth | 98.34 | |
2fpo_A | 202 | Methylase YHHF; structural genomics, putative methyltra | 98.25 | |
1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus thermoph | 98.21 | |
2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, structu | 98.2 | |
2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwich, b | 98.17 | |
2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, methy | 98.15 | |
2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)- methyltransferase [ | 97.48 | |
1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoaspartyl | 97.41 | |
1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PSI, pr | 97.34 | |
3ocj_A | 305 | Putative exported protein; structural genomics, PSI-2, | 97.31 | |
2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; methyt | 97.28 | |
3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltransfer | 97.07 | |
2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRN | 96.86 | |
1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, structural | 96.76 | |
2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toronto di | 96.62 | |
1nw3_A | 416 | Histone methyltransferase DOT1L; HDOT1, histone lysine | 96.37 | |
3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribosomal | 96.14 | |
2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; metal | 96.07 | |
1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; ross | 95.97 | |
1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NMR {St | 95.82 | |
1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- methy | 95.42 | |
1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; RLMA, | 95.22 | |
1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-adenosyl | 94.36 | |
1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O- methyltransferas | 94.3 | |
2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossman-typ | 92.58 | |
3ldu_A | 385 | Putative methylase; structural genomics, PSI-2, protein | 99.25 | |
3k0b_A | 393 | Predicted N6-adenine-specific DNA methylase; methylase, | 99.14 | |
2h00_A | 254 | Methyltransferase 10 domain containing protein; structu | 98.45 | |
2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, structural | 97.45 | |
3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative spli | 97.2 | |
3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; antibiot | 97.15 | |
3ll7_A | 410 | Putative methyltransferase; methytransferase, structura | 97.06 | |
3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycloprop | 96.9 | |
2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomics co | 96.87 | |
3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; protei | 96.36 | |
3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, helical N | 96.24 | |
2r6z_A | 258 | UPF0341 protein in RSP 3' region; alpha-beta protein, s | 95.93 | |
3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridium the | 95.07 | |
3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena vari | 94.72 | |
3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha/beta | 94.21 | |
2p7i_A | 250 | Hypothetical protein; putative methyltransferase, struc | 93.81 | |
1or8_A | 340 | Protein arginine N-methyltransferase 1; protein arginin | 93.49 | |
1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding domain, | 93.11 | |
3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmethionin | 93.0 | |
2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural geno | 92.55 | |
1x19_A | 359 | CRTF-related protein; methyltransferase, bacteriochlloc | 92.13 | |
2oyr_A | 258 | UPF0341 protein YHIQ; alpha-beta protein, structural ge | 91.66 | |
3b3f_A | 341 | Histone-arginine methyltransferase CARM1; protein argin | 90.47 | |
2b3t_A | 276 | Protein methyltransferase HEMK; translation termination | 99.15 | |
1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannaschii, | 98.91 | |
2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; gene d | 98.84 | |
3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransferase; | 98.74 | |
1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxylase; | 98.24 | |
3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransferase, | 98.08 | |
2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase; tra | 98.01 | |
2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltransfe | 98.0 | |
1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structural g | 98.0 | |
1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, methy | 97.88 | |
2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, | 97.8 | |
1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, crystal, s | 97.66 | |
2b25_A | 336 | Hypothetical protein; structural genomics, methyl trans | 97.42 | |
3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural genom | 97.36 | |
2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent meth | 97.0 | |
3f4k_A | 257 | Putative methyltransferase; structural genomics, PSI-2, | 96.92 | |
3m33_A | 226 | Uncharacterized protein; structural genomics, PSI-2, pr | 96.91 | |
3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcytidin | 96.85 | |
3ege_A | 261 | Putative methyltransferase from antibiotic biosynthesis | 96.7 | |
1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed beta she | 96.61 | |
2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosylmeth | 96.58 | |
1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococcus h | 96.51 | |
2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protein; FM | 96.43 | |
2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyltrans | 96.43 | |
3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA domain, | 95.72 | |
3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protein, st | 94.66 | |
2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, pred | 99.08 | |
3lpm_A | 259 | Putative methyltransferase; structural genomics, protei | 98.79 | |
3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adenosyl-m | 98.22 | |
1xxl_A | 239 | YCGJ protein; structural genomics, protein structure in | 97.88 | |
1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messenger | 97.69 | |
3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methyltransf | 97.58 | |
3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural geno | 97.51 | |
1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structural ge | 97.4 | |
2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransferase, S | 97.37 | |
3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; HET: S | 97.25 | |
2o57_A | 297 | Putative sarcosine dimethylglycine methyltransferase; s | 97.16 | |
3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_744700.1, | 97.1 | |
2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; NP_34 | 96.94 | |
1wzn_A | 252 | SAM-dependent methyltransferase; structural genomics, r | 96.92 | |
3m70_A | 286 | Tellurite resistance protein TEHB homolog; structural g | 96.88 | |
3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein structure i | 96.82 | |
1xva_A | 292 | Glycine N-methyltransferase; HET: SAM; 2.20A {Escherich | 96.75 | |
1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; struc | 96.75 | |
2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethionine-d | 96.71 | |
3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgrc, pr | 96.68 | |
3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carbohydrat | 96.6 | |
2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe relat | 96.53 | |
2i6g_A | 199 | Putative methyltransferase; 16420133, structural genomi | 96.46 | |
2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, structura | 96.34 | |
3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_32134 | 96.31 | |
3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, methyltra | 96.23 | |
2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, struct | 96.18 | |
3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protein, st | 96.18 | |
3i9f_A | 170 | Putative type 11 methyltransferase; structural genomics | 96.15 | |
3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltransfera | 96.12 | |
1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alph | 95.94 | |
3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent methylt | 95.84 | |
1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural genomi | 95.23 | |
3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, SAH, S | 95.02 | |
3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, structu | 94.76 | |
3cc8_A | 230 | Putative methyltransferase; NP_977653.1, structural gen | 94.75 | |
3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransferase, S | 94.63 | |
2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-me | 94.6 | |
2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleotidyltr | 94.42 | |
3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann fold m | 94.11 | |
3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glycopepti | 93.79 | |
3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural genomics | 92.53 | |
1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltransferas | 98.73 | |
3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural genomic | 98.01 | |
1vl5_A | 260 | Unknown conserved protein BH2331; 10174951, hypothetica | 97.6 | |
1im8_A | 244 | YECO; methyltransferase, adenosylhomocysteine, structur | 97.33 | |
1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-adenosy | 96.91 | |
3dtn_A | 234 | Putative methyltransferase MM_2633; structural genomics | 96.91 | |
3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structural ge | 98.19 | |
3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, PSI- | 97.53 | |
3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, transfe | 97.26 | |
2i62_A | 265 | Nicotinamide N-methyltransferase; structural genomics, | 95.9 | |
2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, struct | 95.65 | |
1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, protein | 95.54 | |
1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal RNA pr | 95.36 | |
2kw5_A | 202 | SLR1183 protein; structural genomics, northeast structu | 94.78 | |
2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, stru | 94.51 | |
2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus | 92.79 | |
3dp7_A | 363 | SAM-dependent methyltransferase; structural genomics, p | 92.53 | |
3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann-like | 98.03 | |
3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; structu | 97.46 | |
3lcc_A | 235 | Putative methyl chloride transferase; halide methyltran | 97.2 | |
1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se-MAD; | 97.97 | |
1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 specif | 95.74 | |
2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, structur | 94.45 | |
1vlm_A | 219 | SAM-dependent methyltransferase; possible histamine N-m | 96.91 | |
1eg2_A | 319 | Modification methylase RSRI; rossmann fold, exocyclic a | 96.78 | |
1boo_A | 323 | Protein (N-4 cytosine-specific methyltransferase PVU II | 96.5 | |
2zig_A | 297 | TTHA0409, putative modification methylase; methyltransf | 96.45 | |
1g60_A | 260 | Adenine-specific methyltransferase MBOIIA; structural g | 96.73 | |
3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structural ge | 90.68 |
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
---|
Probab=100.00 E-value=0 Score=703.25 Aligned_cols=461 Identities=20% Similarity=0.343 Sum_probs=342.3 Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC---------HHHH-- Q ss_conf 10178889999999998740688834308723054899989674123399999999720246889---------6787-- Q gi|254780836|r 4 FTGSAASLANFIWKNAEDLWGDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNID---------LESF-- 72 (674) Q Consensus 4 ~~~t~s~L~s~iW~~Ad~LRg~~~~~eY~~~ILp~~~Lrrld~~le~~k~~v~~~~~~~~~~~~~---------~~~~-- 72 (674) .+..+++|+++||++||.|||.|++++|++|||||+|||||||+|+++++++.+.+......... .+.+ T Consensus 6 ~~~~~~~L~~~lW~~ad~LRg~~d~~~Yk~yIL~llFlK~lsd~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 85 (544) T 3khk_A 6 EQQFLNDLDNQLWRAADKLRSNLDAANYKHVVLGLIFLKYVSDAFEERQQELTELFQKDDDDNIYYLPREDYDSDEAYQQ 85 (544) T ss_dssp -CCSHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCSSCCCGGGCSSHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHH T ss_conf 69999999999999999984877778808702157879873185799999999886215522343321220000578888 Q ss_pred ----------HHHCCCCCCCCCCCCHHHHHHH-HH--HHHHHHHHHHHCH-------HHHHHHHHCC-----HHHHHH-- Q ss_conf ----------6533896103680368861345-58--9999999975299-------9899987177-----235775-- Q gi|254780836|r 73 ----------VKVAGYSFYNTSEYSLSTLGST-NT--RNNLESYIASFSD-------NAKAIFEDFD-----FSSTIA-- 125 (674) Q Consensus 73 ----------~~~~g~~F~n~s~~~~~~l~~~-~~--~~nl~~yi~gfS~-------nv~dI~~~f~-----f~~~i~-- 125 (674) .......|++++.++|..+... +. .........+.+. .+..+|+.++ +...+. T Consensus 86 ~~~~~~~~~~~~~~~~~f~ip~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~~~~L~~v~~~~ 165 (544) T 3khk_A 86 AIAEELEIGDYYTEKNVFWVPKTARWNKLRDVITLPTGSVIWQDEQGEDVKLRSVSWLIDNAFDDIEKANPKLKGILNRI 165 (544) T ss_dssp HHHHHHTCTHHHHTTTCCCCCTTTCHHHHHHCCSSCC----------------CHHHHHHHHHHHHHHHCGGGSSCSCCS T ss_pred HHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH T ss_conf 88765400023314664336741356888632303320234432201110144689999999999987686765033211 Q ss_pred --HHHHCCHHHHHHHHHCCCCCCC--------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC Q ss_conf --4442362899998740245673--------337611443899999999986227665753681799999999731784 Q gi|254780836|r 126 --RLEKAGLLYKICKNFSGIELHP--------DTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPD 195 (674) Q Consensus 126 --~L~~~~~L~~vI~~F~~idL~p--------~~v~n~~mG~iyE~LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~ 195 (674) ..-..+.|..+|..|+.+++.. ...+++.||++||+||++|++.+|+.+|||||||+|++|||+++ T Consensus 166 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~D~lG~~yE~ll~~~~~~~~k~~G~ffTP~~Iv~lmv~ll---- 241 (544) T 3khk_A 166 SQYQLDADKLIGLINEFSLTSFNNPEYNGEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEML---- 241 (544) T ss_dssp SSSCCCHHHHHHHHHHHC------------------CCSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHH---- T ss_pred HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCC---- T ss_conf 0102767889999875530334541001100145452062899999999998860764765548189999998623---- Q ss_pred CHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC-----CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 011013877640311766540468999999999853100-----533322550466667889999999898088753345 Q gi|254780836|r 196 DALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHH-----KIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRR 270 (674) Q Consensus 196 ~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~-----~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~ 270 (674) .|.. .+||||||||||||++|.+|+.+..... ......++||||+|+.+|+||+|||+|||.+.+ T Consensus 242 ------~p~~-~~I~DPacGsGgfLi~a~~~i~~~~~~~~~~~~~~~~~~~l~G~Ei~~~~~~la~~nm~l~g~~~~--- 311 (544) T 3khk_A 242 ------EPYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN--- 311 (544) T ss_dssp ------CCCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB--- T ss_pred ------CCCC-CCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCCC--- T ss_conf ------8998-837037777617899999999982452222202222011061503877999999988986188866--- Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC Q ss_conf 666682347545799986641899981685676531000111234-4226666535777747706599999999961466 Q gi|254780836|r 271 DLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKE-HKNGELGRFGPGLPKISDGSMLFLMHLANKLELP 349 (674) Q Consensus 271 ~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e-~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~ 349 (674) .+|..+|+|.+|.+...+||+|++|||||++|.......... ...+..+|+..++|++++++++||||++++|++ T Consensus 312 ---~~~~~~d~l~~~~~~~~~fD~Il~NPPfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fi~~~l~~Lk~- 387 (544) T 3khk_A 312 ---FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP- 387 (544) T ss_dssp ---CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE- T ss_pred ---CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC- T ss_conf ---4535675434655655446757506987766555300013545540345643457899874789999999971777- Q ss_pred CCCCCEEEEECCCCCCC-CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCC-----CCCCCEE Q ss_conf 57880799973897134-77644326899999988494688831767765578861699999468874-----3488389 Q gi|254780836|r 350 PNGGGRAAIVLSSSPLF-NGRAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTE-----ERRGKVQ 423 (674) Q Consensus 350 ~~~ggr~aIV~ngs~LF-~G~agsGEs~IRk~lie~d~ieaII~LP~~lFynTgI~t~Iwil~k~K~~-----~rkgkV~ 423 (674) |||+|+|+|.|+|+ +|++ |..||+||+++++|+|||+||.++|++|||+||||||+|+|+. +|+|+|+ T Consensus 388 ---~G~~aiIvp~~~l~~~~~~---e~~iR~~Ll~~~~i~aII~LP~~~F~~t~i~t~Ilvl~K~k~~~~~~~~~~~~V~ 461 (544) T 3khk_A 388 ---TGSMALLLANGSMSSNTNN---EGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKNAKNGKRDRRGQVL 461 (544) T ss_dssp ---EEEEEEEEETHHHHCCGGG---HHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCCSSBTTBCCCTTEEE T ss_pred ---CCEEEEEECCCCCCCCCCH---HHHHHHHHHHCCCEEEEEECCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE T ss_conf ---7806999768854367871---7899999996695899972882006899997599999889887665445678389 Q ss_pred EEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCE-EEEEEECCCCCCCCCCHHH Q ss_conf 9723677657640466442069899999999997210254104744466305-7899720442121008889 Q gi|254780836|r 424 LINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSRENGKFSRMLDYRTFGY-RRIKVLRPLRMSFILDKTG 494 (674) Q Consensus 424 lIDAs~~~~~~rk~G~Kr~~l~~~~i~~Iv~~y~~f~e~e~ski~~~~~Fgy-~~vtverplr~~~~~~~~~ 494 (674) |||||+.+.+ .|+++|.|+++||++|+++|++|++....+ -+.. || +.|+++.-....|.+++.| T Consensus 462 fidas~~~~~---~~~~~~~l~~~~i~~I~~~~~~~~~~~~~~-~~~~--~~s~~v~~~eI~~ndy~L~~~r 527 (544) T 3khk_A 462 FIDARKLGYM---KDRVLRDFKDEDIQKLADTFHNWQQEWSEE-NNQA--GFCFSADLALIRKNDFVLTPGR 527 (544) T ss_dssp EEECTTCSEE---SSSSCEECCHHHHHHHHHHHHHHHHCCCTT-TCBT--TTEEEEEHHHHHHTTTCCCTTT T ss_pred EEECCCCCEE---CCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-CCCC--CEEEEEEHHHHHHCCCEECHHH T ss_conf 9986545410---576678699999999999999987512322-6757--7489966999997695118675 |