254780967
probable multidrug resistance transporter protein
| GeneID in NCBI database: | 8209989 | Locus tag: | CLIBASIA_04340 |
| Protein GI in NCBI database: | 254780967 | Protein Accession: | YP_003065380.1 |
| Gene range: | -(963946, 965142) | Protein Length: | 398aa |
| Gene description: | probable multidrug resistance transporter protein | ||
| COG prediction: | [G] [E] [P] [R] Permeases of the major facilitator superfamily | ||
| KEGG prediction: | probable multidrug resistance transporter protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein | ||
| SEED prediction: | Drug resistance transporter, Bcr/CflA family | ||
| Pathway involved in KEGG: | not defined | ||
| Subsystem involved in SEED: | - none - | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
|---|
|
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 398 | probable multidrug resistance transporter protein [Cand | |||
| 315122615 | 424 | probable multidrug resistance transporter protein [Cand | 1 | 1e-161 | |
| 190891991 | 401 | multidrug resistance transporter protein [Rhizobium etl | 1 | 1e-108 | |
| 218680543 | 408 | drug resistance transporter, Bcr/CflA subfamily protein | 1 | 1e-106 | |
| 86357920 | 401 | Bcr/CflA subfamily drug resistance transporter [Rhizobi | 1 | 1e-105 | |
| 241204870 | 401 | drug resistance transporter, Bcr/CflA subfamily [Rhizob | 1 | 1e-105 | |
| 116252362 | 415 | transmembrane efflux protein [Rhizobium leguminosarum b | 1 | 1e-105 | |
| 209549534 | 415 | drug resistance transporter Bcr/CflA subfamily [Rhizobi | 1 | 1e-104 | |
| 222086144 | 410 | drug resistance transporter protein [Agrobacterium radi | 1 | 1e-104 | |
| 159184948 | 402 | MFS permease [Agrobacterium tumefaciens str. C58] Lengt | 1 | 1e-104 | |
| 325293255 | 416 | bicyclomycin resistance protein [Agrobacterium sp. H13- | 1 | 1e-103 |
| >gi|315122615|ref|YP_004063104.1| probable multidrug resistance transporter protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 424 | Back alignment and organism information |
|---|
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/395 (74%), Positives = 341/395 (86%)
Query: 1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGP 60
+EFV+VIAMLM INSLGIDIILPCLP+IS L L N N+ QHLISFYLIGYGIAQIFYGP
Sbjct: 29 IEFVLVIAMLMGINSLGIDIILPCLPQISQFLGLKNVNHSQHLISFYLIGYGIAQIFYGP 88
Query: 61 LSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIY 120
L+DRFGRK VM+ GLVI+I+ST MVT+ SF+GML MRLIQGIGGAAPRIITISIIRDIY
Sbjct: 89 LADRFGRKAVMISGLVIYILSTIAMVTVTSFSGMLSMRLIQGIGGAAPRIITISIIRDIY 148
Query: 121 DGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFP 180
DG++MAKVLS+ MMIFM+MPI AP++GQAT++L G WI +F+ MG IT I +WYYIRFP
Sbjct: 149 DGKEMAKVLSMTMMIFMVMPIFAPALGQATMSLLGDWIWVFIWMGAITFIIMMWYYIRFP 208
Query: 181 ETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240
ETL+PRDVRPLN+ ILHSFSLIF +R S YNIANS MGAILGFVNSSQQ+Y +Y
Sbjct: 209 ETLNPRDVRPLNISLILHSFSLIFINRLSIFYNIANSFMMGAILGFVNSSQQVYTQVYSF 268
Query: 241 GNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPI 300
GNLFP+AFA+GG A+++ASF+NS LV+KFGIR VSHYSLL +ITG WLL+Q++S+ P+
Sbjct: 269 GNLFPLAFAIGGMAIALASFMNSHLVDKFGIRIVSHYSLLFLLLITGIWLLIQVSSDSPM 328
Query: 301 HLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQS 360
+L IFI F FL+SFQFGLINSNFSSISMEPFSHLAGTASS+FGFINT+IST++GIIIGQS
Sbjct: 329 NLWIFILFVFLSSFQFGLINSNFSSISMEPFSHLAGTASSVFGFINTLISTLVGIIIGQS 388
Query: 361 FNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT 395
FNGTTYPITIGFF +AV S+ICI I EK MF K
Sbjct: 389 FNGTTYPITIGFFALAVLSYICIFIAEKGVMFNKK 423
|
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|190891991|ref|YP_001978533.1| multidrug resistance transporter protein [Rhizobium etli CIAT 652] Length = 401 | Back alignment and organism information |
|---|
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/393 (50%), Positives = 280/393 (71%), Gaps = 1/393 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMA+NSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 5 EFIALAAFLMAVNSLAIDIMLPALQQIGASLGVESENHRQFVVSTYLLGFGCAQLFYGPL 64
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++ GLVI+I+S +V + SF G+L +R +QG+G AA R+IT+SI+RDIY
Sbjct: 65 SDRFGRRTPLLIGLVIYILSAISIVFVPSFAGLLALRFLQGVGSAATRVITVSIVRDIYG 124
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V G W IF+ + + T I +W YIR PE
Sbjct: 125 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-VVMFFGNWHLIFLFIAAMATAIAVWAYIRLPE 183
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P++VRP +I +F L+ +R + Y IA++ GA+ GF+NS+QQ+YVGIY LG
Sbjct: 184 TLHPQNVRPFTARSIFGAFKLVLTNRVALCYTIASTFIFGALFGFINSAQQVYVGIYGLG 243
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP+AFA MS++SF NSR V K G+RR+SH SLL F I WL+VQ+TS+ P+
Sbjct: 244 VYFPVAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLLGFIAINTIWLIVQMTSSEPMP 303
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI FF LA FQFG I SNF+S++MEP H+AGTASS+ GF++TV ++G IGQ+F
Sbjct: 304 FALFITFFGLAMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGAMIGAGIGQAF 363
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394
+GT P+ G+F +++ + +LI EK ++F++
Sbjct: 364 DGTALPMVAGYFTVSIVGLVFVLIAEKGRLFQQ 396
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|218680543|ref|ZP_03528440.1| drug resistance transporter, Bcr/CflA subfamily protein [Rhizobium etli CIAT 894] Length = 408 | Back alignment and organism information |
|---|
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 278/395 (70%), Gaps = 1/395 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMA+NSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 12 EFIALAAFLMAVNSLAIDIMLPALQQIGASLGVESENHRQFVVSTYLLGFGCAQLFYGPL 71
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++ GLV++I S +V + SF G+L +R IQGIG AA R+IT+SI+RDIY
Sbjct: 72 SDRFGRRTPLLIGLVVYIASAVSIVFVPSFAGLLVLRFIQGIGSAATRVITVSIVRDIYG 131
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V + G W IF+ + + T I +W Y+R PE
Sbjct: 132 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-IVMVFGNWHLIFLFIAAMATAIAVWAYLRLPE 190
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P +VRP +I +F L+ +R + Y IA++ GA+ GF+NS+QQ+YVGIY LG
Sbjct: 191 TLHPANVRPFTARSIFGAFKLVLTNRIALCYTIASTFIFGALFGFINSAQQVYVGIYDLG 250
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP AFA MS++SF NSR V K G+RR+SH SLL F I WL+VQ+ S+ P+
Sbjct: 251 VYFPFAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLLGFIAINTIWLIVQMASSGPMP 310
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI+FF LA FQFG I SNF+S++MEP H+AGTASS+ GF++TV ++G IGQ+F
Sbjct: 311 FALFISFFGLAMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGALIGAGIGQAF 370
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396
+GT P+ G+F +++ + +LI EK ++F++
Sbjct: 371 DGTALPMVAGYFTVSIIGLVFVLIAEKGRLFQQQN 405
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|86357920|ref|YP_469812.1| Bcr/CflA subfamily drug resistance transporter [Rhizobium etli CFN 42] Length = 401 | Back alignment and organism information |
|---|
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/393 (50%), Positives = 276/393 (70%), Gaps = 1/393 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMAINSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 5 EFIALAAFLMAINSLAIDIMLPALQQIGASLGVESENHRQFVVSSYLLGFGCAQLFYGPL 64
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++ GLV++I S +V + SF G+L +R IQG+G AA R+ITISI+RDIY
Sbjct: 65 SDRFGRRTPLLIGLVVYITSAIGIVFVPSFAGLLVLRFIQGVGSAATRVITISIVRDIYG 124
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V G W IF+ + + T I +W Y+R PE
Sbjct: 125 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-IVMFFGNWHLIFLFIATMATAIGVWAYVRLPE 183
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P+++RP +I +F L+ +R + Y IA++ GA+ GF+NS+QQIYVGIY LG
Sbjct: 184 TLHPQNIRPFTARSIFGAFKLVLTNRVALCYTIASTFIFGALFGFINSAQQIYVGIYGLG 243
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP AFA MS++SF NSR V K G+RR+SH SLL F I WL+VQ S+ P+
Sbjct: 244 VYFPFAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLLGFIAINTIWLIVQTASSEPMP 303
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI+FF LA FQFG I SNF+S++MEP H+AGTASS+ GF++TV ++G IGQ+F
Sbjct: 304 FALFISFFGLAMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGALIGAGIGQAF 363
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394
+GT P+ G+F +++ I +LI EK ++F +
Sbjct: 364 DGTALPMVAGYFIVSIIGLIFVLIAEKGRLFHQ 396
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|241204870|ref|YP_002975966.1| drug resistance transporter, Bcr/CflA subfamily [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 401 | Back alignment and organism information |
|---|
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 277/395 (70%), Gaps = 1/395 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMAINSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 5 EFIALAAFLMAINSLAIDIMLPALQQIGASLGVESENHRQFVVSSYLLGFGCAQLFYGPL 64
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++FGLV++I+S +V + SF G+L +R +QGIG AA R+ITISI+RDIY
Sbjct: 65 SDRFGRRTPLLFGLVVYIVSAIGIVFVPSFAGLLVLRFVQGIGSAATRVITISIVRDIYG 124
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V G W IF+ + + T I +W Y+R PE
Sbjct: 125 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-IVMFFGNWHLIFLFIATMATAIAVWAYLRLPE 183
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P +VRP +I +F L+ +R + Y IA++ GA+ GF+NS+QQ+YVGIY LG
Sbjct: 184 TLHPANVRPFTARSIFGAFKLVLTNRVALCYTIASTFIFGALFGFINSAQQVYVGIYDLG 243
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP AFA MS++SF NSR V K G+RR+SH SL+ F I WL+VQ+ S P+
Sbjct: 244 VYFPFAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLIGFIAINTIWLIVQLASTEPMP 303
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI+FF L+ FQFG I SNF+S++MEP H+AGTASS+ GF++TV I+G IGQ+F
Sbjct: 304 FALFISFFGLSMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGAIIGAGIGQAF 363
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396
+GT P+ G+F +++ + +LI EK ++F+
Sbjct: 364 DGTALPMVAGYFTVSIIGLVFVLIAEKGRLFQSQN 398
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|116252362|ref|YP_768200.1| transmembrane efflux protein [Rhizobium leguminosarum bv. viciae 3841] Length = 415 | Back alignment and organism information |
|---|
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/395 (50%), Positives = 277/395 (70%), Gaps = 1/395 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMAINSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 19 EFIALAAFLMAINSLAIDIMLPALQQIGASLGVESENHRQFVVSSYLLGFGCAQLFYGPL 78
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++FGLV++I+S +V + SF G+L +R +QGIG AA R+ITISI+RDIY
Sbjct: 79 SDRFGRRTPLLFGLVVYIVSAIGIVFVPSFAGLLVLRFVQGIGSAATRVITISIVRDIYG 138
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V G W IF+ + + T I +W Y+R PE
Sbjct: 139 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-IVMFFGNWHLIFLFIATMATGIAVWAYLRLPE 197
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P +VRP +I +F L+ +R + Y IA++ GA+ GF+NS+QQ+YVGIY LG
Sbjct: 198 TLHPANVRPFTARSIFGAFKLVLTNRVALCYTIASTFIFGALFGFINSAQQVYVGIYDLG 257
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP AFA MS++SF NSR V K G+RR+SH SL+ F I WL+VQ+ S P+
Sbjct: 258 VYFPFAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLIGFIAINTIWLIVQMASTEPMP 317
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI+FF L+ FQFG I SNF+S++MEP H+AGTASS+ GF++TV I+G IGQ+F
Sbjct: 318 FALFISFFGLSMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGAIIGAGIGQAF 377
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396
+GT P+ G+F +++ I +LI EK ++F+
Sbjct: 378 DGTALPMVAGYFVVSIIGLIFVLIAEKGRLFQSQN 412
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|209549534|ref|YP_002281451.1| drug resistance transporter Bcr/CflA subfamily [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 415 | Back alignment and organism information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 278/395 (70%), Gaps = 1/395 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMA+NSL IDI+LP L +I SL + +EN+ Q ++S YL+G+G AQ+FYGPL
Sbjct: 19 EFIALAAFLMAVNSLAIDIMLPALQQIGASLGVESENHRQFVVSTYLLGFGCAQLFYGPL 78
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ ++ GLVI+I+S +V + +F G+L +R +QGIG AA R+IT+SI+RDIY
Sbjct: 79 SDRFGRRTPLLIGLVIYILSAISIVFVPTFAGLLALRFVQGIGSAATRVITVSIVRDIYG 138
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ V G W IF+ + + I +W YIR PE
Sbjct: 139 GRQMAEVMSLIMMVFMIVPVIAPGTGQ-IVMFFGNWHLIFLFIAAMAIAIAVWAYIRLPE 197
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P++VRP +I +F L+ +R + Y IA++ GA+ GF+NS+QQ+YVGIY LG
Sbjct: 198 TLHPQNVRPFTARSIFGAFKLVLTNRIALCYTIASTFIFGALFGFINSAQQVYVGIYDLG 257
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
FP AFA MS++SF NSR V K G+RR+SH SL+ F I WL+VQ+ S+ P+
Sbjct: 258 VYFPFAFAGVAIFMSLSSFFNSRFVGKLGMRRLSHGSLIGFITINTIWLIVQMASSEPMP 317
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+FI+FF LA FQFG I SNF+S++MEP H+AGTASS+ GF++TV ++G IGQ+F
Sbjct: 318 FALFISFFGLAMFQFGWIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGALIGAGIGQAF 377
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396
+GT P+ G+F +++ I +LI EK ++F++
Sbjct: 378 DGTALPMVAGYFIVSIIGLIFVLIAEKGRLFQQQN 412
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|222086144|ref|YP_002544676.1| drug resistance transporter protein [Agrobacterium radiobacter K84] Length = 410 | Back alignment and organism information |
|---|
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/395 (48%), Positives = 280/395 (70%), Gaps = 5/395 (1%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + A LMAINSL IDI+LP L +I SL + NEN+ Q++++ YLIG+G AQ+FYGPL
Sbjct: 5 EFIALAAFLMAINSLAIDIMLPALQQIGSSLGVENENHRQYVVTAYLIGFGSAQLFYGPL 64
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR++ ++ GL++ I+S F + I SF G+L +R IQG+G AA R+ITISI+RDI+
Sbjct: 65 SDRFGRRLPLLIGLIVFIVSAFGIALIPSFAGLLALRFIQGLGSAATRVITISIVRDIFG 124
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FMI+P++AP GQ + L W IFV + + T + +W Y R PE
Sbjct: 125 GRQMAEVMSLIMMVFMIVPVIAPGSGQ-IIMLVSTWHMIFVFIATMATLVGIWMYFRLPE 183
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P +VRPL + ++ F ++ +R + Y +A++ GA+ GF+NS+QQIY GIY LG
Sbjct: 184 TLKPENVRPLTVKSVAAGFRMVLTNRVALCYTLASTFLFGALFGFINSAQQIYSGIYGLG 243
Query: 242 NLFPIAFAVGGFA--MSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP 299
P+AF GG A M+++SFINS+LV +FG+RR+SH +L F ++T WL+VQ+ P
Sbjct: 244 VYTPVAF--GGVAVFMALSSFINSQLVGRFGMRRLSHGALFGFCLVTFIWLIVQLYGPAP 301
Query: 300 IHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQ 359
+ +F+ FF LA FQFGLI SNF+S++MEP H+AGTASS+ GF++TV +G IGQ
Sbjct: 302 MPFPLFMVFFALAMFQFGLIGSNFNSLAMEPLGHVAGTASSVLGFMSTVGGASIGAGIGQ 361
Query: 360 SFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394
FNGT P+ +G+F +++ + +LI EK ++F+
Sbjct: 362 YFNGTATPMVVGYFTVSLIGIVFVLIAEKGRLFQP 396
|
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|159184948|ref|NP_354837.2| MFS permease [Agrobacterium tumefaciens str. C58] Length = 402 | Back alignment and organism information |
|---|
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/393 (51%), Positives = 273/393 (69%), Gaps = 1/393 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + AMLMA+N+L IDI+LP L +I SL + NEN+ Q++IS YL+G+GIAQ+ YGP+
Sbjct: 5 EFIGLAAMLMALNALAIDIMLPGLQEIGASLGVVNENHRQYVISTYLLGFGIAQLLYGPI 64
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ M+ GL I+IIS +V + SFTG+L +R IQGIG AA R+ITISI+RDIY
Sbjct: 65 SDRFGRRKPMLVGLAIYIISAIAVVFVPSFTGLLVLRFIQGIGSAATRVITISIVRDIYG 124
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FM++P++AP GQ V G W IF M I +T W Y R PE
Sbjct: 125 GRQMAEVMSLIMMVFMVVPVIAPGTGQ-IVLFFGDWHLIFAFMAGIAAVVTAWMYFRLPE 183
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL P DVRP +IL F ++ +R + Y ++++ GA+ GF+NS++Q+Y GIY LG
Sbjct: 184 TLHPDDVRPFTARSILGGFKIVLTNRIALCYTLSSTFIFGALFGFINSAEQVYKGIYGLG 243
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
F AFA M+ +SFIN+RLV +FG+R++SH SLL F IT WLLVQI P+
Sbjct: 244 AWFAAAFAGVALFMAFSSFINARLVGRFGMRKLSHGSLLGFIAITFVWLLVQILGPEPMP 303
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
IFI FF LA FQFG I SNF+S++MEP H+AGTASS+ GF+ TV +++G IGQ+F
Sbjct: 304 FAIFIVFFALAMFQFGWIGSNFNSLAMEPLGHVAGTASSVIGFMGTVGGSLIGAGIGQAF 363
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394
+GT P+ GFF +++ I +LI EK +F+
Sbjct: 364 DGTALPMVAGFFAVSIIGLIFVLIGEKGVLFQA 396
|
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|325293255|ref|YP_004279119.1| bicyclomycin resistance protein [Agrobacterium sp. H13-3] Length = 416 | Back alignment and organism information |
|---|
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/393 (49%), Positives = 274/393 (69%), Gaps = 1/393 (0%)
Query: 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
EF+ + AMLMA+N+L IDI+LP L +I SL + NEN+ Q++IS YL+G+GIAQ+ YGP+
Sbjct: 19 EFIALAAMLMALNALAIDIMLPGLQEIGASLGVVNENHRQYVISSYLLGFGIAQLLYGPI 78
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
SDRFGR+ M+ GL I+I+S +V + SFTG+L +R IQGIG AA R+ITISI+RDIY
Sbjct: 79 SDRFGRRKPMLVGLAIYIVSAIAVVFVPSFTGLLVLRFIQGIGSAATRVITISIVRDIYG 138
Query: 122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181
GR MA+V+S+ MM+FM++P++AP GQ V G W IF M I +T W Y R PE
Sbjct: 139 GRQMAEVMSLIMMVFMVVPVIAPGTGQ-IVLFFGDWHLIFAFMAGIAAVVTAWMYFRLPE 197
Query: 182 TLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241
TL DVRP + +IL F ++ +R + Y ++++ GA+ GF+NS++Q+Y GIY LG
Sbjct: 198 TLHADDVRPFTVRSILGGFKIVLTNRIALCYTLSSTFIFGALFGFINSAEQVYKGIYGLG 257
Query: 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
F AFA M+ +SFIN+RLV +FG+R++SH SLL F IT WL+VQ+ P+
Sbjct: 258 AWFAAAFAGVALFMAFSSFINARLVGRFGMRKLSHGSLLGFIAITFVWLVVQMVGPEPMP 317
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
IFI FF LA FQFG I SNF+S++MEP H+AGTASS+ GF+ TV +++G +IGQ+F
Sbjct: 318 FAIFIVFFALAMFQFGWIGSNFNSLAMEPLGHVAGTASSVIGFMGTVGGSLIGAVIGQAF 377
Query: 362 NGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394
+GT P+ GFF +++ + +LI EK +F+
Sbjct: 378 DGTALPMVAGFFAVSIIGLVFVLIGEKGVLFQA 410
|
Species: Agrobacterium sp. H13-3 Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
| Identity | Alignment graph | Length | Definition | E-value |
| Target | 398 | probable multidrug resistance transporter protein [Cand | ||
| PRK11102 | 377 | PRK11102, PRK11102, bicyclomycin/multidrug efflux syste | 2e-42 | |
| TIGR00710 | 385 | TIGR00710, efflux_Bcr_CflA, drug resistance transporter | 7e-42 | |
| KOG2533 | 495 | KOG2533, KOG2533, KOG2533, Permease of the major facili | 8e-10 | |
| COG2223 | 417 | COG2223, NarK, Nitrate/nitrite transporter [Inorganic i | 5e-09 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (MFS) i | 2e-13 | |
| PRK11652 | 394 | PRK11652, emrD, multidrug resistance protein D; Provisi | 6e-26 | |
| PRK10473 | 392 | PRK10473, PRK10473, multidrug efflux system protein Mdt | 2e-18 | |
| pfam07690 | 345 | pfam07690, MFS_1, Major Facilitator Superfamily | 6e-17 | |
| TIGR00886 | 366 | TIGR00886, 2A0108, nitrite extrusion protein (nitrite f | 4e-08 | |
| TIGR00881 | 379 | TIGR00881, 2A0104, phosphoglycerate transporter family | 6e-05 | |
| PRK11043 | 401 | PRK11043, PRK11043, putative transporter; Provisional | 3e-17 | |
| KOG1330 | 493 | KOG1330, KOG1330, KOG1330, Sugar transporter/spinster t | 1e-08 | |
| TIGR00711 | 485 | TIGR00711, efflux_EmrB, drug resistance transporter, Em | 4e-06 | |
| TIGR00895 | 398 | TIGR00895, 2A0115, benzoate transport | 1e-05 | |
| COG2271 | 448 | COG2271, UhpC, Sugar phosphate permease [Carbohydrate t | 1e-04 | |
| TIGR01299 | 742 | TIGR01299, synapt_SV2, synaptic vesicle protein SV2 | 1e-04 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (MFS) i | 9e-04 | |
| TIGR00880 | 141 | TIGR00880, 2_A_01_02, Multidrug resistance protein | 9e-15 | |
| PRK15402 | 406 | PRK15402, PRK15402, multidrug efflux system translocase | 5e-13 | |
| KOG2615 | 451 | KOG2615, KOG2615, KOG2615, Permease of the major facili | 6e-06 | |
| KOG3764 | 464 | KOG3764, KOG3764, KOG3764, Vesicular amine transporter | 3e-05 | |
| KOG0254 | 513 | KOG0254, KOG0254, KOG0254, Predicted transporter (major | 1e-04 | |
| TIGR00898 | 505 | TIGR00898, 2A0119, cation transport protein | 2e-04 | |
| pfam06609 | 598 | pfam06609, TRI12, Fungal trichothecene efflux pump (TRI | 5e-04 | |
| COG2814 | 394 | COG2814, AraJ, Arabinose efflux permease [Carbohydrate | 6e-13 | |
| KOG0255 | 521 | KOG0255, KOG0255, KOG0255, Synaptic vesicle transporter | 2e-10 | |
| KOG2532 | 466 | KOG2532, KOG2532, KOG2532, Permease of the major facili | 3e-06 | |
| PRK15403 | 413 | PRK15403, PRK15403, multidrug efflux system protein Mdt | 4e-09 | |
| pfam00083 | 449 | pfam00083, Sugar_tr, Sugar (and other) transporter | 7e-05 | |
| PLN00028 | 476 | PLN00028, PLN00028, nitrate transmembrane transporter; | 4e-04 | |
| KOG0252 | 538 | KOG0252, KOG0252, KOG0252, Inorganic phosphate transpor | 0.003 | |
| TIGR00900 | 365 | TIGR00900, 2A0121, H+ Antiporter protein | 0.004 |
| >gnl|CDD|182964 PRK11102, PRK11102, bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 2e-42
Identities = 97/387 (25%), Positives = 191/387 (49%), Gaps = 17/387 (4%)
Query: 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRK 68
MLM L ID+ LP LP I+ +S + Q +S Y++G+ I Q+FYGP++D FGRK
Sbjct: 1 MLM---PLAIDMYLPALPVIAADFGVSAGSV-QMTLSAYILGFAIGQLFYGPMADSFGRK 56
Query: 69 IVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKV 128
V++ G ++ ++ + ++ MR + G+ AA ++ +++RD++ + +++
Sbjct: 57 PVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRM 116
Query: 129 LSIAMMIFMIMPILAPSIGQATVALSGGWIGIF---VCMGVITTFITLWYYIRFPETLDP 185
+S ++ I P+LAP IG + + W IF ++ + + PETL
Sbjct: 117 MSFVTLVMTIAPLLAPIIGGW-LLVWFSWHAIFWVLALAAILAAALVFF---FIPETLPK 172
Query: 186 RDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLF 244
+P +L + +F+ +F+H+ Y +A+ + + F+ + +Y+ + + F
Sbjct: 173 ERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNF 232
Query: 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWL-LVQITSNHPIHLL 303
FA+ + + + INSR V + G + + L I F I G WL + + L+
Sbjct: 233 GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF-IMGIWLVVSALLDLGFWALV 291
Query: 304 IFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNG 363
+ +A F +I+SN ++ ++ F H+AGTASS+ G + I I+G ++ +
Sbjct: 292 VGVAAFV---GCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLAPFT 348
Query: 364 TTYPITIGFFGIAVSSFICILIVEKNQ 390
+ +P+ ++ S + L + +
Sbjct: 349 SAWPMVWSMAFCSILSILFYLYASRPK 375
|
Length = 377 |
| >gnl|CDD|162006 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 7e-42
Identities = 99/380 (26%), Positives = 191/380 (50%), Gaps = 7/380 (1%)
Query: 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS 62
F +++ L + LGID+ LP P+I+ L Q ++ YL+G+ Q+ +GPLS
Sbjct: 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIV-QMTLTLYLLGFAAGQLLWGPLS 64
Query: 63 DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG 122
DR+GR+ V++ GL I +S+ + N+ +L +R +Q G +A +I+ +++RDIY G
Sbjct: 65 DRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPG 124
Query: 123 RDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPET 182
+++++ SI M + + P +AP +G + + W IF + + ++ + PET
Sbjct: 125 EELSRIYSILMPVLALAPAVAPLLG-GYILVWLSWHAIFAFLSLAGILLSALIFFILPET 183
Query: 183 LDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN 242
L ++ Y +F L+ K + Y + + G F + + +Y+ I +
Sbjct: 184 LPYEARIQISTYF--ETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSP 241
Query: 243 L-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
F + FA+ AM F+N R ++K+G + + L++F ++ L +
Sbjct: 242 SVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFA-VSAVLLEITAILGLGSW 300
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+I F+ +I+S + ++E F H+AGTAS++FG + V+ I+G ++
Sbjct: 301 AMIIGPMMFVG-IGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIH 359
Query: 362 NGTTYPITIGFFGIAVSSFI 381
T +P+++ +AV S +
Sbjct: 360 GNTAWPMSLSCLVLAVVSVL 379
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. Length = 385 |
| >gnl|CDD|37744 KOG2533, KOG2533, KOG2533, Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 8e-10
Identities = 72/412 (17%), Positives = 138/412 (33%), Gaps = 36/412 (8%)
Query: 3 FVIVIAMLMAINSLG-IDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL 61
+ + L L I+ L + + L L G L + + +GY I Q G L
Sbjct: 46 ILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLG-VLDTVFYVGYIIGQFPSGLL 104
Query: 62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD 121
DRF + ++ + F+ ++SF G++ +R + G+ + ++I+ + Y
Sbjct: 105 GDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYG 164
Query: 122 GRDMAKVLSI----AMMIFMIMPILAPSIGQ-ATVALSGGWIGIFVCMGVITTFITLWYY 176
+ + I A + + ++A + + GW +F+ GVIT + + +
Sbjct: 165 KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224
Query: 177 IRFPE-------------TLDPRDVRPLNLYAILHSFSLI-----FKHRASTLYNIANSL 218
P+ L +R I + F K +++
Sbjct: 225 FFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFF 284
Query: 219 TMGAILGFVNSSQQIYVGIYQL----GNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRV 274
GF NL + VGG I + S ++ RR+
Sbjct: 285 LKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL 344
Query: 275 SHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHL 334
L + I G+ L+ + I + L + +I +++S ++ +
Sbjct: 345 LFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATA--IIALSWTSANLAGNTKA 402
Query: 335 AGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIV 386
T S+I + G I GQ F P + C+ IV
Sbjct: 403 LTTVSAIIDGTGSA-----GAISGQLFRSLDAPRYGWGAVFYMLVAACVGIV 449
|
Length = 495 |
| >gnl|CDD|32405 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 5e-09
Identities = 68/376 (18%), Positives = 131/376 (34%), Gaps = 26/376 (6%)
Query: 20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI 79
+ P I LS G + L+G + ++ YG L+DRFG + + +++ +
Sbjct: 32 LFSPLGVFIKSDFGLSEGQKGLLVAIPILVG-ALLRLPYGFLTDRFGGRKWTILSMLLLL 90
Query: 80 ISTFIM---VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMM-- 134
I + VT S +L + L+ G+ GA+ + + + L IA
Sbjct: 91 IPCLGLAFAVTYPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAGAGN 149
Query: 135 -----IFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVR 189
++ P++A + G G + + + W + D + R
Sbjct: 150 LGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVA----LAIAAVLAWLGMN-----DVPEHR 200
Query: 190 PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFA 249
+ +F ++ + L ++ T G +GF V + L + A
Sbjct: 201 ASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIA 260
Query: 250 -VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF 308
+ ++A + L ++ G RRV+ + + L H ++F+A
Sbjct: 261 FLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAV 320
Query: 309 FFLASFQFGLIN-SNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT--T 365
F GL N S F I + F G + I G I + L + G S + T
Sbjct: 321 FLALFVFAGLGNGSVFKMIPVI-FPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSY 379
Query: 366 YPITIGFFGIAVSSFI 381
+ + + +
Sbjct: 380 TGAFMLLLAFYLVALV 395
|
Length = 417 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 68/384 (17%), Positives = 147/384 (38%), Gaps = 35/384 (9%)
Query: 4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD 63
++++ + ++ L ++ P LP +++ L LS G ++S + +GY + + G LSD
Sbjct: 1 LLLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAG-LIVSAFSLGYALGSLLAGYLSD 59
Query: 64 RFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR 123
RFGR+ V++ GL++ + + ++ +S +L R + G+GG A ++I + + +
Sbjct: 60 RFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK 119
Query: 124 DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETL 183
+ + L + F + +L P +G +A S GW +F+ + ++ + L L
Sbjct: 120 ERGRALGLFSAGFGLGALLGPLLGGL-LAESLGWRWLFLILAILGLLLALLLLFLLRLLL 178
Query: 184 DPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL 243
L +A L G + + L
Sbjct: 179 ---------------------------LLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAA 211
Query: 244 FP-IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHL 302
+ ++ G + + + L ++ G RR+ LLI ++ LL+ + L
Sbjct: 212 EAGLLLSLFGLGGILGALLGGLLSDRLGRRRL---LLLIGLLLAALGLLLLALAPSLALL 268
Query: 303 LIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFN 362
L+ + + + S GTAS +F ++ + ++ G +
Sbjct: 269 LVALLLLGF--GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326
Query: 363 GTTYPITIGFFGIAVSSFICILIV 386
Y +L++
Sbjct: 327 TGGYGGVFLILAALALLAALLLLL 350
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.. Length = 352 |
| >gnl|CDD|183259 PRK11652, emrD, multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 6e-26
Identities = 93/356 (26%), Positives = 170/356 (47%), Gaps = 39/356 (10%)
Query: 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS 62
+ ++ +L+A+ + I +P + ++ L++ E Q +++ YL+ YG++Q+FYGPLS
Sbjct: 9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVR-EGAVQAVMAAYLLTYGLSQLFYGPLS 67
Query: 63 DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG 122
DR GR+ V++ G+ I I+ T + + +S T ++ IQG+G ++ ++ RD+Y+G
Sbjct: 68 DRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG 127
Query: 123 RDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPET 182
+ S+ M ++ P+LAP IG L GW ++ + ++ +T PET
Sbjct: 128 TQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGAGVTFSMARWMPET 186
Query: 183 LDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN 242
P D R + L S+ + +R Y + T+ I F S + + L +
Sbjct: 187 R-PADARRTRV---LASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSS 242
Query: 243 -----LF----PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLL------IFFMITG 287
LF P AF FA R ++F + S++ + I G
Sbjct: 243 MTVSILFILPIPAAFFGAWFA--------GRPNKRF--STLMWQSVICCLLAGLLMWIPG 292
Query: 288 SWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFG 343
+ ++ + + LL+ A FF + G++ +S +MEPF +LAGTA ++ G
Sbjct: 293 WFGVMNVWT-----LLVPAALFFFGA---GMLFPLATSGAMEPFPYLAGTAGALLG 340
|
Length = 394 |
| >gnl|CDD|182486 PRK10473, PRK10473, multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 2e-18
Identities = 97/350 (27%), Positives = 148/350 (42%), Gaps = 55/350 (15%)
Query: 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGL 75
GID+ L LP+I+ L+ S E S YL G A +F G ++DR GRK V + G
Sbjct: 17 AGIDMYLVGLPRIAADLNAS-EAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGA 75
Query: 76 VIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMI 135
+ II++ + + + L R +QGIG ++ +I+RD D R AKVLS+ I
Sbjct: 76 ALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGI 135
Query: 136 FMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYA 195
I+P+LAP +G + L W +F M + + L ET R +
Sbjct: 136 TCIIPVLAPVLGH-LIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAASSK-P 193
Query: 196 ILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAM 255
+S SL+ + S L + +L++ IL FVN+S + + Q+G F+ G +A+
Sbjct: 194 RENSESLLNRFFLSRL--VITTLSVTVILTFVNTSPVLLME--QMG------FSRGEYAI 243
Query: 256 SIA---------SFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI 306
+A SF + F R + S ++F L
Sbjct: 244 IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF--------------------LAAG 283
Query: 307 AFFFLASFQ------FGLINSNFS-------SISMEPFSHLAGTASSIFG 343
L+ LI + FS S ++ PFS AG ASS G
Sbjct: 284 ITLALSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLG 333
|
Length = 392 |
| >gnl|CDD|148990 pfam07690, MFS_1, Major Facilitator Superfamily | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 6e-17
Identities = 73/348 (20%), Positives = 147/348 (42%), Gaps = 7/348 (2%)
Query: 7 IAMLMAINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF 65
+ + + LG ++ P LP +++ L +S G L++ + +GY +AQ G LSDRF
Sbjct: 1 LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIG-LLLTAFSLGYALAQPLAGRLSDRF 59
Query: 66 GRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDM 125
GR+ V++ GL++ + +++ +S +L +R++QG+GG A ++I D + +
Sbjct: 60 GRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEER 119
Query: 126 AKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDP 185
+ L + F + L P +G +A GW F+ + ++ + + P
Sbjct: 120 GRALGLLSAGFGLGAALGPLLG-GLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPE 178
Query: 186 RDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-F 244
A R L+ + L G + + +Y + L L
Sbjct: 179 SKRPKPAEEAPAPLVPWKLLLRDPVLWLLLALLLFGFAFFALFTYLPLYQEVLGLSALLA 238
Query: 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLI 304
+ + G +I + RL ++ G RR +LL+ + L+ +T + L+
Sbjct: 239 GLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLTESSLWLLVA 298
Query: 305 FIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTI 352
+ F A F +N+ S ++ + GTAS ++ ++ +
Sbjct: 299 LLLLGFGAGLVFPALNALASDLAPK---EERGTASGLYNTAGSLGGAL 343
|
Length = 345 |
| >gnl|CDD|162090 TIGR00886, 2A0108, nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 71/338 (21%), Positives = 127/338 (37%), Gaps = 28/338 (8%)
Query: 28 ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT 87
I D L LS G L++ ++ + +I G L D+FG + L++ I
Sbjct: 28 IKDDLGLSTAQLGN-LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL 86
Query: 88 IN-SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA--------MMIFMI 138
S++ +L +RL GI G + + I + + L +A + +
Sbjct: 87 AVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFV 145
Query: 139 MPILAPSIGQAT---VALSGGWIGIFVCMGVI--TTFITLWYYIRFP------ETLDPRD 187
MP + S+ L+ GW + V G++ + + P L +
Sbjct: 146 MPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG 205
Query: 188 VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIA 247
R L +F+ R + + + S+T G+ LG + + + L + A
Sbjct: 206 ARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGA 265
Query: 248 FA-VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI 306
+A +GG S+A + + ++ G R L+ F + LV + P+ L +FI
Sbjct: 266 YASLGGLLGSLARPLGGAISDRLGGARK---LLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322
Query: 307 AFFFLASFQFGLIN-SNFSSISMEPFSHLAGTASSIFG 343
F F G N S F+ + F G S + G
Sbjct: 323 VLFVALFFFSGAGNGSTFALVPHI-FRRATGAVSGLVG 359
|
Length = 366 |
| >gnl|CDD|162086 TIGR00881, 2A0104, phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 62/360 (17%), Positives = 120/360 (33%), Gaps = 36/360 (10%)
Query: 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84
+P + + + LS + G L SF I YGI++ G +SDR ++ + GL++ I
Sbjct: 18 MPYLVEEIGLSKTDLGLLLSSFS-IAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76
Query: 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAP 144
S M + + GI + + + +S + L P
Sbjct: 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136
Query: 145 SIGQATVALSGGWIGIFV---CMGVITTFITLWYY--------------IRFPETLDPRD 187
+ +A W +F+ + +I + I + E +
Sbjct: 137 PLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAE 196
Query: 188 VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV----GIYQL-GN 242
+ L + ++ ++ G ++ S +Y+ G + +
Sbjct: 197 KKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWS-PLYLTQEKGFSKEKAS 255
Query: 243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVS---HYSLLIFFMITGSWLLVQITSNHP 299
+ +GG ++ + S + F RR + LI + WL +N
Sbjct: 256 WAFTLYELGGLVGTLLAGWLSDKL--FNGRRGPLAVFFMALIIVSLLVYWLNP--AANPL 311
Query: 300 IHLLIFIAFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIG 358
+ L I F L +G I+ E AGTA+ GF + + G+ +G
Sbjct: 312 MDL---ICLFALGFLVYGPQML-IGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367
|
Length = 379 |
| >gnl|CDD|182924 PRK11043, PRK11043, putative transporter; Provisional | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 3e-17
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS 62
F++ +A L + L D+ LP I L S L S +L G+ + Q+ +GPLS
Sbjct: 7 FLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASL-SLFLAGFALGQLLWGPLS 65
Query: 63 DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG 122
DR+GRK V++ GL + + + M+ + S +L +R +Q +G + +I +++ D Y
Sbjct: 66 DRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA 125
Query: 123 RDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT 168
+ +V + M + + P LAP +G A + GW IF + IT
Sbjct: 126 QKANRVFATIMPLVALSPALAPLLG-AWLLNHFGWQAIFATLFAIT 170
|
Length = 401 |
| >gnl|CDD|36544 KOG1330, KOG1330, KOG1330, Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84
L ++ ++S+ G L + +++ + IA +G L+DR+ RK V+ G+ I ++ F
Sbjct: 56 LKEVQTYFNISDSELGL-LQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA 114
Query: 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAP 144
N F +L R GIG A+ I S+I D + ++VL I + L
Sbjct: 115 SGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGY 174
Query: 145 SIGQATVALSGGWIGIFVCMGVITTFITL 173
+G +L+ W F V+ + L
Sbjct: 175 VVGSVVASLTFWWRWAFRGSAVLGVIVGL 203
|
Length = 493 |
| >gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Query: 1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGP 60
+ V+++ MA+ L I+ +P I+ L S Q +I+ Y++ I+ G
Sbjct: 3 LTIVLMLGTFMAV--LDSTIVNVAIPTIAGDLGSSLSQ-VQWVITSYMLANAISIPLTGW 59
Query: 61 LSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIY 120
L+ RFG + + + + + + + M+ R+IQG GG ++ S + +IY
Sbjct: 60 LAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY 119
Query: 121 DGRDMAKVLSIAMMIFMIMPILAPSI-GQATVALSGGW-------IGIFVCMGVITTF 170
+ ++I + ++ P L P++ G W IGI V +
Sbjct: 120 PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFIL 177
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. Length = 485 |
| >gnl|CDD|162095 TIGR00895, 2A0115, benzoate transport | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD 63
+I+ ++M ++ + + P IS L G L S LIG +F+GPL+D
Sbjct: 19 IILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLG-FLFSAGLIGMAFGALFFGPLAD 77
Query: 64 RFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR 123
R GRK V+++ +++ + T + + T +L +R + G+G +++ + R
Sbjct: 78 RIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR 137
Query: 124 DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETL 183
+ + + I + + + + GW +F G+ + L PE++
Sbjct: 138 FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSLFYVGGIAPLLLLLLLMRFLPESI 196
Query: 184 D 184
D
Sbjct: 197 D 197
|
Length = 398 |
| >gnl|CDD|32452 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 8/161 (4%)
Query: 26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85
P + + LS G L S + I YG+++ G LSDR + M FGL++ I +
Sbjct: 53 PALIEDGGLSKTQLGI-LGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILF 111
Query: 86 VTINSFTGMLCMRLIQGI---GGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMI-MPI 141
S + ++ G G P TI+ + ++ SI I +
Sbjct: 112 GFSPSLFLFAVLWVLNGWFQGMGWPPCARTIT---HWFSRKERGTWWSIWNTSHNIGGAL 168
Query: 142 LAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPET 182
A A GGW F G+I + L +
Sbjct: 169 APLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209
|
Length = 448 |
| >gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Query: 6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF 65
V+ + + + + + ++ LP L + + G L +G + F+G L+D+
Sbjct: 171 VLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGM-LGLIVYLGMMVGAFFWGGLADKL 229
Query: 66 GRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ--GIGGAAPRIITISIIRDIYDGR 123
GRK ++ L ++ F + + L RL+ GIGGA P I S +
Sbjct: 230 GRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIP--IVFSYFAEFLAQE 287
Query: 124 DMAKVLSIAMMIFMIMPILAPSIGQATV 151
+ LS M +MI I A ++ A +
Sbjct: 288 KRGEHLSWLCMFWMIGGIYAAAMAWAII 315
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. Length = 742 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 9e-04
Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 1/176 (0%)
Query: 4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD 63
++++A+ + S G +L LP + + L+S + +G + + G LSD
Sbjct: 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSD 236
Query: 64 RFGRK-IVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG 122
R GR+ ++++ GL++ + ++ S +L L+ G G +++ ++
Sbjct: 237 RLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPP 296
Query: 123 RDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR 178
+ + L P + + G + + L +
Sbjct: 297 EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLLP 352
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.. Length = 352 |
| >gnl|CDD|162085 TIGR00880, 2_A_01_02, Multidrug resistance protein | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 9e-15
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 45 SFYLIGYGIAQIFYGPLS----DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLI 100
L GY + Q+ Y PLS DRFGRK V++ GL I ++ST + ++ T ++ R +
Sbjct: 1 GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60
Query: 101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160
QG G A + ++I DIY + L + + P+L P +G +A GW
Sbjct: 61 QGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLG-GVLAQFLGWRAP 119
Query: 161 FVCMGVITTFITLWYYIRFPET 182
F+ + ++ + PET
Sbjct: 120 FLFLAILALAAFILLAFLLPET 141
|
Length = 141 |
| >gnl|CDD|185300 PRK15402, PRK15402, multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 5e-13
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGL 75
+ D+I P + + + + E + ++ YL G Q GPLSDR GR+ VM+ G+
Sbjct: 27 IANDMIQPGMLAVVEDFNAGAE-WVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85
Query: 76 VIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMI 135
I++ ++ S +R +QGIG + + I++ ++ D K+ ++ +
Sbjct: 86 AFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANV 145
Query: 136 FMIMPILAPSIGQATVALSGGWIGIFVCMGVIT--TFITLWYYIRFPETLDPRDVRPLNL 193
++ P+L P +G A + + W G+FV + +F LW + PET L+L
Sbjct: 146 ALLAPLLGPLVGAALIHV-LPWRGMFVLFAALAALSFFGLWRAM--PETAGRVG-EKLSL 201
Query: 194 YAILHSFSLIFKHR 207
+ + L+ K+R
Sbjct: 202 KELGRDYKLVLKNR 215
|
Length = 406 |
| >gnl|CDD|37826 KOG2615, KOG2615, KOG2615, Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 6e-06
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 6/153 (3%)
Query: 39 YGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMR 98
Y L S + I I+ +G LSDR+GRK V++ L+ +S + +F + R
Sbjct: 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLAR 128
Query: 99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV---ALSG 155
+ GI +I +II D+ + +S+ F + IL P IG ++SG
Sbjct: 129 FLGGIFKGNLSVIR-AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG 187
Query: 156 GWIGIFVCMGVI--TTFITLWYYIRFPETLDPR 186
+ C+ V ++ PETL R
Sbjct: 188 SYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220
|
Length = 451 |
| >gnl|CDD|38968 KOG3764, KOG3764, KOG3764, Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 3e-05
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 53 IAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIIT 112
+ F+G L DR G KI M+ GL + +ST + NS+ + R +QG+G A
Sbjct: 121 LVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180
Query: 113 ISIIRDIY-DGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI 171
++++ D++ + + V+ IA+ + ++ P G +G V V+
Sbjct: 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDG 240
Query: 172 TLWYYIRFPETLDPR 186
L + P +DP
Sbjct: 241 ALQLLVIEPTEMDPD 255
|
Length = 464 |
| >gnl|CDD|35475 KOG0254, KOG0254, KOG0254, Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.6 bits (102), Expect = 1e-04
Identities = 27/131 (20%), Positives = 53/131 (40%)
Query: 43 LISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG 102
L S +G + + G L DR GRK ++ +V+ +I I+ S+ ++ R++ G
Sbjct: 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTG 153
Query: 103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFV 162
+G ++ I +I ++S+ + I +L I T + GW
Sbjct: 154 LGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLG 213
Query: 163 CMGVITTFITL 173
+ + L
Sbjct: 214 LALIPAVILAL 224
|
Length = 513 |
| >gnl|CDD|162097 TIGR00898, 2A0119, cation transport protein | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 44 ISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGI 103
S + +G + +G LSDRFGRK V++ ++ +S + ++T L RL+ G+
Sbjct: 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGM 192
Query: 104 GGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163
G + + + + + A V ++ + F + +L P + W + +
Sbjct: 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLA 248
Query: 164 MGVITTFITLWYYIRFPE 181
+ + TF+ PE
Sbjct: 249 VSL-PTFLFFLLSWFVPE 265
|
Length = 505 |
| >gnl|CDD|115279 pfam06609, TRI12, Fungal trichothecene efflux pump (TRI12) | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 5e-04
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 45 SFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIG 104
+ + +G ++ + G L+DRFGR+ ++ +I ++ + T N F +L + G+
Sbjct: 85 TLWTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAAMTLLGV- 143
Query: 105 GAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF--- 161
A P + I ++ + L I + M P GQ +A+ G W IF
Sbjct: 144 AAGPAGASPLFIGELMSNKTKFLGLLIVSAPTIAMNGAGPYFGQ-RLAIQGNWRWIFYIY 202
Query: 162 -VCMGVITTFITLWYY 176
+ + I +WY+
Sbjct: 203 IIMSAIAVLLIIIWYH 218
|
This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes. Length = 598 |
| >gnl|CDD|32643 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 6e-13
Identities = 57/315 (18%), Positives = 114/315 (36%), Gaps = 14/315 (4%)
Query: 1 MEFVIVIAMLMAINSLGID--IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFY 58
++ ++A+ +A ++G + + LP I+ L +S GQ LI+ Y +G +
Sbjct: 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQ-LITAYALGVALGAPLL 68
Query: 59 GPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRD 118
L+ R R+ +++ L + I+S + SF +L R + G+ I ++
Sbjct: 69 ALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAAR 128
Query: 119 IYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR 178
+ + L++ + +L +G L GW F+ + V+ L +
Sbjct: 129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRATFLAIAVLALLALLLLWKL 187
Query: 179 FPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY 238
P +L L + + + L +A L M + +
Sbjct: 188 L-----PPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVA 242
Query: 239 QLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSN 297
+ G A I + + RL ++ G RR +LL+ + L + T
Sbjct: 243 GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL---LALTFTGA 298
Query: 298 HPIHLLIFIAFFFLA 312
P L + + A
Sbjct: 299 SPALALALLFLWGFA 313
|
Length = 394 |
| >gnl|CDD|35476 KOG0255, KOG0255, KOG0255, Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.5 bits (151), Expect = 2e-10
Identities = 59/385 (15%), Positives = 133/385 (34%), Gaps = 38/385 (9%)
Query: 44 ISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGI 103
S + +G + + +GPLSDRFGRK V++ L++ II + ++ L R + G
Sbjct: 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183
Query: 104 GGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163
G+ P + ++ +I + L++ F+ +L ++ W +F
Sbjct: 184 FGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAA----YITRDWRWLFWI 239
Query: 164 MGVITTFITLWYYI------------RFPETLDPRDVRPLNLYAILHSFSLIFKHRASTL 211
+ + + L +++ R E + L L+
Sbjct: 240 ISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRP 299
Query: 212 YNIANSLTMGAILGFVNSSQQIYVGIYQ--------------------LGNLFPIAFAVG 251
+ + + L + + Y +Y LG + F +
Sbjct: 300 LKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLS 359
Query: 252 GFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFL 311
G A F N L+ +FG R SL + + + + +H ++ + F
Sbjct: 360 GLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFF 419
Query: 312 ASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG 371
F LI + + + A A S + ++++ + +++ Q F + +
Sbjct: 420 IGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPL--LGLILF 477
Query: 372 FFGIAVSSFICILIVEKNQMFRKTE 396
+ + + +L++ + +
Sbjct: 478 GWLALLLGLLSLLLLPETKGKPLPG 502
|
Length = 521 |
| >gnl|CDD|37743 KOG2532, KOG2532, KOG2532, Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 3e-06
Identities = 70/366 (19%), Positives = 123/366 (33%), Gaps = 21/366 (5%)
Query: 42 HLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM--VTINSFTGMLCMRL 99
+ S + GY + QI G L+D+FG + V +I + T + F +L +R
Sbjct: 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRF 136
Query: 100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG 159
+QG+G SI+ + + ++I + I+ + S GW
Sbjct: 137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196
Query: 160 IFVCMGVITTFIT-LWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTL--YNIAN 216
IF G++ LW+ ++ L I S + + I
Sbjct: 197 IFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILT 256
Query: 217 SLTMGAIL--GFVNSSQQIYVGIYQLGNL-----FPIAF-----AVGGFAMSIASFINSR 264
S + AI F + + Y L F + A+ AM+I F+ +
Sbjct: 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQ 316
Query: 265 LVEKFGIRRVSHYSLLIFFMITGSW----LLVQITSNHPIHLLIFIAFFFLASFQFGLIN 320
L ++ R +S ++ F L+ + H L+ + +A G
Sbjct: 317 LSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNI 376
Query: 321 SNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSF 380
S F + AG I F+ + I +++G T F IA
Sbjct: 377 SGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGIL 436
Query: 381 ICILIV 386
I I+
Sbjct: 437 IVGNII 442
|
Length = 466 |
| >gnl|CDD|185301 PRK15403, PRK15403, multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 9/228 (3%)
Query: 44 ISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGI 103
+S YL G Q GPLSDR GR+ V++ G +I ++ + S T L R IQG
Sbjct: 57 VSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGT 116
Query: 104 GGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163
+ +++ + K+++I I ++ PI+ P G A + W +F
Sbjct: 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAI 175
Query: 164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAI 223
+ V+ + + PET+ R P + ++L F +F++R SL+ +
Sbjct: 176 IAVMGLIAFVGLLLAMPETVK-RGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM 234
Query: 224 LGFVNSSQQIYVGIYQLGNLFPIAFA---VGGF-AMSIASFINSRLVE 267
+ +V S I + G + FA V F A+ +A+ I +R V+
Sbjct: 235 MSWVAVSPVILI---DAGGMTTSQFAWTQVPVFGAVIVANAIVARFVK 279
|
Length = 413 |
| >gnl|CDD|143864 pfam00083, Sugar_tr, Sugar (and other) transporter | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 18 IDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI 77
I S ++ ++S + +G I +F G L DRFGRK ++ G V+
Sbjct: 26 IKFFKRFGALTSIGACAASTVLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVL 85
Query: 78 HIISTFIMVTINSF-TGMLC-MRLIQGIG 104
+I + ML R+I G+G
Sbjct: 86 FVIGALLQGFAKGKSFYMLIVGRVIVGLG 114
|
Length = 449 |
| >gnl|CDD|177665 PLN00028, PLN00028, nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST 82
P LP I D+L+L+ + G I + G +++ GP+ D +G + F L++ +
Sbjct: 57 PLLPIIRDNLNLTKSDIGNAGI-ASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAV 115
Query: 83 FIMVTINSFTGMLCMRLIQGIGGAA 107
F M ++S TG + +R G A
Sbjct: 116 FCMSLVSSATGFIAVRFFIGFSLAT 140
|
Length = 476 |
| >gnl|CDD|35473 KOG0252, KOG0252, KOG0252, Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.003
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 48 LIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTINSFTGML----CMRLI 100
L+G Q+F+G L D+FGRK V L+I II + + V S G++ R +
Sbjct: 94 LVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFL 153
Query: 101 QGIG 104
GIG
Sbjct: 154 LGIG 157
|
Length = 538 |
| >gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 47/288 (16%), Positives = 96/288 (33%), Gaps = 25/288 (8%)
Query: 47 YLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTG-----MLCMRLIQ 101
++ Y + G L+DR+ RK VM+ +I + ++ + G + + I
Sbjct: 43 GMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102
Query: 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161
I A +++ D+ + + S++ + + I+ P IG A G I+
Sbjct: 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIW 162
Query: 162 VCMGVITTFITLWYYIRFPE-TLDPRDVRPLNLYA-ILHSFSLIFKHR-------ASTLY 212
V L +R PE + + K+ + L+
Sbjct: 163 VDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLF 222
Query: 213 NIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIR 272
N+ + + A+ +V Q Y+G + A G + + + + G
Sbjct: 223 NLVFAPAIVALFPYV---QSKYLGRGST--HYGWVLAAFGLGALLGALL----LGLLGRY 273
Query: 273 RVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLIN 320
+ + G +LV + L + + F +G IN
Sbjct: 274 FKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFA--IGVGYGPIN 319
|
Length = 365 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
| Identity | Alignment graph | Length | Definition | Probability |
| Target | 398 | probable multidrug resistance transporter protein [Cand | ||
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 100.0 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 100.0 | |
| PRK11043 | 401 | inner membrane transport protein YdhC; Provisional | 100.0 | |
| TIGR00710 | 400 | efflux_Bcr_CflA drug resistance transporter, Bcr/CflA s | 100.0 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 100.0 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT; Pro | 100.0 | |
| PRK10091 | 389 | MFS transport protein AraJ; Provisional | 100.0 | |
| PRK03545 | 390 | sugar efflux transporter; Provisional | 100.0 | |
| PRK10504 | 471 | multidrug efflux system protein MdtE; Provisional | 100.0 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 100.0 | |
| PRK09874 | 406 | drug efflux system protein MdtG; Provisional | 100.0 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisional | 100.0 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 100.0 | |
| PRK05122 | 395 | major facilitator superfamily transporter; Provisional | 100.0 | |
| PRK12382 | 393 | hypothetical protein; Provisional | 100.0 | |
| PRK10054 | 395 | putative MFS-type transporter YdeE; Provisional | 100.0 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transport a | 100.0 | |
| pfam00083 | 449 | Sugar_tr Sugar (and other) transporter. | 100.0 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 100.0 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 100.0 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 100.0 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 100.0 | |
| PRK10489 | 416 | enterobactin exporter EntS; Provisional | 100.0 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion transpo | 100.0 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provisional | 100.0 | |
| TIGR00898 | 557 | 2A0119 cation transport protein; InterPro: IPR004749 Or | 100.0 | |
| TIGR00894 | 514 | 2A0114euk Na(+)-dependent inorganic phosphate cotranspo | 100.0 | |
| pfam05977 | 524 | DUF894 Bacterial protein of unknown function (DUF894). | 100.0 | |
| pfam03825 | 400 | Nuc_H_symport Nucleoside H+ symporter. | 99.97 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and meta | 99.97 | |
| KOG2504 | 509 | consensus | 99.97 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.96 | |
| PRK11128 | 383 | putative 3-phenylpropionic acid transporter; Provisiona | 99.95 | |
| TIGR00899 | 377 | 2A0120 sugar efflux transporter; InterPro: IPR004750 Th | 99.95 | |
| TIGR00712 | 468 | glpT glycerol-3-phosphate transporter; InterPro: IPR005 | 99.94 | |
| PRK11195 | 415 | major facilitator family transporter; Provisional | 99.94 | |
| TIGR00890 | 429 | 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 | 99.94 | |
| PRK09528 | 418 | lacY galactoside permease; Reviewed | 99.94 | |
| PRK08633 | 1150 | 2-acyl-glycerophospho-ethanolamine acyltransferase; Val | 99.93 | |
| PRK11010 | 490 | ampG muropeptide transporter; Validated | 99.91 | |
| KOG2563 | 480 | consensus | 99.88 | |
| KOG0253 | 528 | consensus | 99.85 | |
| KOG4686 | 459 | consensus | 99.76 | |
| TIGR00902 | 388 | 2A0127 MFS transporter, phenyl propionate permease (PPP | 99.72 | |
| TIGR00882 | 397 | 2A0105 oligosaccharide:H+ symporter; InterPro: IPR00057 | 99.68 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein; InterPro: IP | 99.63 | |
| TIGR00889 | 435 | 2A0110 nucleoside transporter; InterPro: IPR004740 This | 99.54 | |
| TIGR02718 | 391 | sider_RhtX_FptX siderophore transporter, RhtX/FptX fami | 99.46 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 100.0 | |
| TIGR00711 | 501 | efflux_EmrB drug resistance MFS transporter, drug:H+ an | 100.0 | |
| PRK03893 | 486 | putative sialic acid transporter; Provisional | 100.0 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate transport | 100.0 | |
| TIGR00895 | 413 | 2A0115 MFS transporter, aromatic acid:H+ symporter (AAH | 100.0 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 100.0 | |
| PRK03699 | 394 | hypothetical protein; Provisional | 100.0 | |
| pfam07690 | 345 | MFS_1 Major Facilitator Superfamily. | 100.0 | |
| PRK09556 | 463 | uhpT sugar phosphate antiporter; Reviewed | 100.0 | |
| TIGR00893 | 427 | 2A0114 d-galactonate transporter; InterPro: IPR004744 D | 100.0 | |
| TIGR00881 | 404 | 2A0104 phosphoglycerate transporter family protein; Int | 100.0 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a large | 100.0 | |
| pfam06609 | 598 | TRI12 Fungal trichothecene efflux pump (TRI12). This fa | 100.0 | |
| PRK10077 | 486 | xylE D-xylose transporter XylE; Provisional | 100.0 | |
| KOG2532 | 466 | consensus | 100.0 | |
| KOG1330 | 493 | consensus | 100.0 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 100.0 | |
| TIGR00883 | 413 | 2A0106 MFS transporter, metabolite:H+ symporter (MHS) f | 100.0 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and metabo | 100.0 | |
| KOG0255 | 521 | consensus | 99.97 | |
| TIGR00900 | 387 | 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug | 99.97 | |
| KOG0254 | 513 | consensus | 99.97 | |
| TIGR00896 | 372 | CynX cyanate transporter; InterPro: IPR004747 This fami | 99.97 | |
| KOG3764 | 464 | consensus | 99.97 | |
| TIGR00879 | 572 | SP MFS transporter, sugar porter (SP) family; InterPro: | 99.97 | |
| TIGR00891 | 453 | 2A0112 MFS transporter, sialate:H+ symporter (SHS) fami | 99.96 | |
| KOG0569 | 485 | consensus | 99.96 | |
| TIGR00892 | 475 | 2A0113 monocarboxylate transporter; InterPro: IPR004743 | 99.96 | |
| pfam01306 | 413 | LacY_symp LacY proton/sugar symporter. This family is c | 99.95 | |
| PRK06814 | 1139 | acylglycerophosphoethanolamine acyltransferase; Provisi | 99.92 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Reviewed | 99.91 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.89 | |
| PRK09669 | 442 | putative symporter YagG; Provisional | 99.89 | |
| TIGR00897 | 411 | 2A0118 polyol permease; InterPro: IPR004748 Proteins in | 99.89 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease; InterPro: IPR0127 | 99.88 | |
| TIGR00885 | 427 | fucP L-fucose:H+ symporter permease; InterPro: IPR00527 | 99.84 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.84 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transporters [ | 99.83 | |
| PRK09848 | 457 | glucuronide transporter; Provisional | 99.81 | |
| pfam03209 | 402 | PUCC PUCC protein. This protein is required for high-le | 99.81 | |
| KOG2816 | 463 | consensus | 99.77 | |
| TIGR00792 | 470 | gph sugar (Glycoside-Pentoside-Hexuronide) transporter; | 99.77 | |
| pfam03092 | 425 | BT1 BT1 family. Members of this family are transmembran | 99.7 | |
| pfam01770 | 410 | Folate_carrier Reduced folate carrier. The reduced fola | 99.33 | |
| KOG4332 | 454 | consensus | 99.25 | |
| pfam06963 | 433 | FPN1 Ferroportin1 (FPN1). This family represents a cons | 99.23 | |
| KOG3574 | 510 | consensus | 98.82 | |
| KOG3810 | 433 | consensus | 98.22 | |
| TIGR00806 | 542 | rfc reduced folate carrier; InterPro: IPR002666 The red | 96.96 | |
| KOG2533 | 495 | consensus | 100.0 | |
| TIGR00886 | 472 | 2A0108 nitrite transporter; InterPro: IPR004737 This fa | 99.97 | |
| pfam03137 | 582 | OATP Organic Anion Transporter Polypeptide (OATP) famil | 99.84 | |
| KOG2325 | 488 | consensus | 99.77 | |
| pfam05631 | 354 | DUF791 Protein of unknown function (DUF791). This famil | 99.73 | |
| KOG3626 | 735 | consensus | 99.67 | |
| TIGR00805 | 723 | oat sodium-independent organic anion transporter; Inter | 99.42 | |
| KOG0637 | 498 | consensus | 98.9 | |
| pfam03219 | 491 | TLC TLC ATP/ADP transporter. | 98.52 | |
| COG3202 | 509 | ATP/ADP translocase [Energy production and conversion] | 97.66 | |
| KOG2615 | 451 | consensus | 99.96 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid transpor | 99.83 | |
| KOG3098 | 461 | consensus | 99.32 | |
| TIGR00880 | 148 | 2_A_01_02 Multidrug resistance protein; InterPro: IPR00 | 99.95 | |
| PRK10054 | 395 | putative MFS-type transporter YdeE; Provisional | 99.65 | |
| PRK10489 | 416 | enterobactin exporter EntS; Provisional | 99.61 | |
| PRK03893 | 486 | putative sialic acid transporter; Provisional | 99.61 | |
| PRK03545 | 390 | sugar efflux transporter; Provisional | 99.61 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.6 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a large | 99.54 | |
| TIGR00924 | 501 | yjdL_sub1_fam amino acid/peptide transporter (Peptide:H | 99.53 | |
| PRK10091 | 389 | MFS transport protein AraJ; Provisional | 99.53 | |
| TIGR00883 | 413 | 2A0106 MFS transporter, metabolite:H+ symporter (MHS) f | 99.35 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate transport | 99.25 | |
| TIGR00890 | 429 | 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 | 99.24 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [General | 99.22 | |
| pfam05977 | 524 | DUF894 Bacterial protein of unknown function (DUF894). | 99.19 | |
| KOG0569 | 485 | consensus | 99.14 | |
| pfam00854 | 372 | PTR2 POT family. The POT (proton-dependent oligopeptide | 98.94 | |
| pfam06813 | 248 | Nodulin-like Nodulin-like. This family represents a con | 98.92 | |
| KOG4686 | 459 | consensus | 98.8 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2; InterPro: IPR0 | 98.8 | |
| TIGR00901 | 531 | 2A0125 AmpG-related permease; InterPro: IPR004752 The s | 98.68 | |
| pfam02487 | 409 | CLN3 CLN3 protein. This is a family of proteins from th | 98.63 | |
| TIGR00889 | 435 | 2A0110 nucleoside transporter; InterPro: IPR004740 This | 98.46 | |
| KOG1237 | 571 | consensus | 97.95 | |
| TIGR00926 | 781 | 2A1704 Oligopeptide transporter (Peptide:H+ symporter); | 97.86 | |
| PRK03612 | 516 | spermidine synthase; Provisional | 97.82 | |
| TIGR00788 | 594 | fbt folate/biopterin transporter; InterPro: IPR004324 M | 96.65 | |
| KOG3880 | 409 | consensus | 95.37 | |
| KOG2601 | 503 | consensus | 92.04 | |
| KOG0252 | 538 | consensus | 99.89 | |
| pfam11700 | 477 | ATG22 Vacuole effluxer Atg22 like. Autophagy is a major | 99.87 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [General | 99.81 | |
| TIGR00887 | 557 | 2A0109 phosphate:H+ symporter; InterPro: IPR004738 In y | 99.72 | |
| PRK10207 | 490 | inner membrane transporter YhiP; Provisional | 99.88 | |
| PRK12382 | 393 | hypothetical protein; Provisional | 99.85 | |
| PRK09874 | 406 | drug efflux system protein MdtG; Provisional | 99.85 | |
| PRK05122 | 395 | major facilitator superfamily transporter; Provisional | 99.82 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT; Pro | 99.76 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provisional | 99.72 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.69 | |
| KOG2504 | 509 | consensus | 99.37 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamily [Ca | 99.34 | |
| PRK08633 | 1150 | 2-acyl-glycerophospho-ethanolamine acyltransferase; Val | 99.3 | |
| PRK11010 | 490 | ampG muropeptide transporter; Validated | 99.27 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion transpo | 99.26 | |
| TIGR00892 | 475 | 2A0113 monocarboxylate transporter; InterPro: IPR004743 | 99.16 | |
| TIGR00899 | 377 | 2A0120 sugar efflux transporter; InterPro: IPR004750 Th | 99.13 | |
| PRK06814 | 1139 | acylglycerophosphoethanolamine acyltransferase; Provisi | 99.0 | |
| TIGR00897 | 411 | 2A0118 polyol permease; InterPro: IPR004748 Proteins in | 98.82 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.65 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.54 | |
| PRK10504 | 471 | multidrug efflux system protein MdtE; Provisional | 99.43 | |
| PRK11128 | 383 | putative 3-phenylpropionic acid transporter; Provisiona | 99.41 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.21 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.19 | |
| PRK11043 | 401 | inner membrane transport protein YdhC; Provisional | 99.08 | |
| KOG3762 | 618 | consensus | 98.86 | |
| KOG2532 | 466 | consensus | 98.41 | |
| PRK11462 | 460 | putative transporter; Provisional | 98.28 | |
| KOG2325 | 488 | consensus | 97.95 | |
| KOG2816 | 463 | consensus | 97.93 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid transpor | 97.75 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.6 | |
| TIGR00711 | 501 | efflux_EmrB drug resistance MFS transporter, drug:H+ an | 98.95 | |
| pfam05978 | 157 | UNC-93 Ion channel regulatory protein UNC-93. This fami | 97.93 | |
| pfam01306 | 413 | LacY_symp LacY proton/sugar symporter. This family is c | 99.51 | |
| PRK09528 | 418 | lacY galactoside permease; Reviewed | 99.46 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.46 | |
| KOG2563 | 480 | consensus | 96.7 | |
| pfam01733 | 305 | Nucleoside_tran Nucleoside transporter. This is a famil | 96.24 | |
| pfam02487 | 409 | CLN3 CLN3 protein. This is a family of proteins from th | 95.03 | |
| PRK09556 | 463 | uhpT sugar phosphate antiporter; Reviewed | 99.43 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.22 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.2 | |
| PRK11195 | 415 | major facilitator family transporter; Provisional | 98.97 | |
| pfam06609 | 598 | TRI12 Fungal trichothecene efflux pump (TRI12). This fa | 98.72 | |
| pfam07690 | 345 | MFS_1 Major Facilitator Superfamily. | 99.43 | |
| pfam03825 | 400 | Nuc_H_symport Nucleoside H+ symporter. | 99.41 | |
| TIGR00886 | 472 | 2A0108 nitrite transporter; InterPro: IPR004737 This fa | 98.61 | |
| KOG2533 | 495 | consensus | 98.38 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 98.34 | |
| KOG2615 | 451 | consensus | 98.18 | |
| KOG0252 | 538 | consensus | 97.54 | |
| PRK03699 | 394 | hypothetical protein; Provisional | 99.42 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.41 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisional | 99.41 | |
| TIGR00895 | 413 | 2A0115 MFS transporter, aromatic acid:H+ symporter (AAH | 99.27 | |
| TIGR00710 | 400 | efflux_Bcr_CflA drug resistance transporter, Bcr/CflA s | 98.88 | |
| KOG3764 | 464 | consensus | 98.81 | |
| pfam06813 | 248 | Nodulin-like Nodulin-like. This family represents a con | 98.44 | |
| TIGR00894 | 514 | 2A0114euk Na(+)-dependent inorganic phosphate cotranspo | 97.28 | |
| KOG3762 | 618 | consensus | 99.24 | |
| TIGR00881 | 404 | 2A0104 phosphoglycerate transporter family protein; Int | 98.89 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 98.24 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transport a | 99.11 | |
| TIGR00879 | 572 | SP MFS transporter, sugar porter (SP) family; InterPro: | 99.03 | |
| TIGR00893 | 427 | 2A0114 d-galactonate transporter; InterPro: IPR004744 D | 98.94 | |
| TIGR00900 | 387 | 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug | 98.82 | |
| TIGR00880 | 148 | 2_A_01_02 Multidrug resistance protein; InterPro: IPR00 | 98.63 | |
| TIGR00898 | 557 | 2A0119 cation transport protein; InterPro: IPR004749 Or | 98.55 | |
| KOG0255 | 521 | consensus | 98.48 | |
| TIGR00891 | 453 | 2A0112 MFS transporter, sialate:H+ symporter (SHS) fami | 98.47 | |
| TIGR00712 | 468 | glpT glycerol-3-phosphate transporter; InterPro: IPR005 | 97.75 | |
| TIGR00887 | 557 | 2A0109 phosphate:H+ symporter; InterPro: IPR004738 In y | 97.14 | |
| PRK03612 | 516 | spermidine synthase; Provisional | 96.97 | |
| TIGR00924 | 501 | yjdL_sub1_fam amino acid/peptide transporter (Peptide:H | 96.78 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2; InterPro: IPR0 | 92.51 | |
| TIGR01272 | 322 | gluP glucose/galactose transporter WARNING; InterPro: I | 99.04 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and meta | 98.96 | |
| pfam06779 | 85 | DUF1228 Protein of unknown function (DUF1228). This fam | 98.85 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Reviewed | 98.68 | |
| PRK10207 | 490 | inner membrane transporter YhiP; Provisional | 98.49 | |
| TIGR00896 | 372 | CynX cyanate transporter; InterPro: IPR004747 This fami | 98.71 | |
| pfam03137 | 582 | OATP Organic Anion Transporter Polypeptide (OATP) famil | 96.85 | |
| TIGR00882 | 397 | 2A0105 oligosaccharide:H+ symporter; InterPro: IPR00057 | 97.88 | |
| pfam07672 | 265 | MFS_Mycoplasma Mycoplasma MFS transporter. These protei | 97.82 | |
| KOG3098 | 461 | consensus | 96.81 | |
| pfam05631 | 354 | DUF791 Protein of unknown function (DUF791). This famil | 96.41 | |
| KOG0637 | 498 | consensus | 95.76 |
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=421.71 Aligned_cols=385 Identities=24% Similarity=0.299 Sum_probs=337.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 38999999999988657669999999999819998899999999999999999999999986508289999999999999 Q gi|254780967|r 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS 81 (398) Q Consensus 2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 81 (398) T Consensus 3 ~fll~~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~q-ltis~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~ 81 (392) T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLH-IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIA 81 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 699999999999889999999619999999797999999-9999999999999999899999848839999999999999 Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 99851001101110022321001111111000123321000111122122331000111111111122221111110145 Q gi|254780967|r 82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161 (398) Q Consensus 82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f 161 (398) T Consensus 82 s~~~~~a~~~~~ll~~R~lqG~g~~~~~v~~~aii~D~~~~~~~~~~~s~~~~~~~~~p~~aP~lGg~l-~~~~gW~~~F 160 (392) T PRK10473 82 SLLCSLAETSSLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI-MLKFPWQSLF 160 (392) T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHH T ss_conf 999998636999999999999688779999999999976999997998999999999888888899999-9874949999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC Q ss_conf 67888887777888761678864022101111112333100000000025677788763100146888765455431531 Q gi|254780967|r 162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241 (398) Q Consensus 162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398) T Consensus 161 ~~l~~~~~l~~l~~~~~lpET~~~~~~~~---~~~~~~~~~~l~~r~fl~~~l~~~l~~~~~f~fis~sp~i~~~~~gls 237 (392) T PRK10473 161 YTMAAMGIAVLLLSLFILKETRPARAPAA---SSKPRENSESLLNRFFLSRLVITTLSVSVILTFVNTSPVLLMEQMGFE 237 (392) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC T ss_conf 99999999999999996878899876640---248999999980823799999999999999999980799999991898 Q ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 1-015889988657677889999985001565124688778889999999987325777640379989989999999999 Q gi|254780967|r 242 N-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLIN 320 (398) Q Consensus 242 ~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (398) T Consensus 238 ~~~fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~~l~l~~~~~l-~~~--~~~----~~~l~~~~l~~~g~~~~~ 310 (392) T PRK10473 238 RGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITL-ALS--PSH----AVSLFGFTLICAGFSVGF 310 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHH--HHH----HHHHHHHHHHHHHHHHHH T ss_conf 8999999999999999999999999999579999999999999999999-998--888----899999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC Q ss_conf 999999985346676999999999999999999999999983117999999999999999999999422000343069 Q gi|254780967|r 321 SNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTELR 398 (398) Q Consensus 321 ~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~r 398 (398) T Consensus 311 ~~~~a~Al~~~~~~AGtASal~G~~q~~~~al~~~l~~~l~~~~~~~~~~~m~~~s~lal~~~l~v~~~~~~~~~~~~ 388 (392) T PRK10473 311 GVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILIACSIVSLLLILFVAPGRPVAAHEEI 388 (392) T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 999999966575141199999999999999999999998678847899999999999999999998189878676789 |
|
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=418.70 Aligned_cols=383 Identities=22% Similarity=0.366 Sum_probs=331.4 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 93899999999998865766999999999981999889999999999999999999999998650828999999999999 Q gi|254780967|r 1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398) Q Consensus 1 ~~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398) T Consensus 7 ~~~i~~l~~l~~~~~la~d~ylPalP~ia~~~~~s~~~vq-~tls~f~~g~a~~ql~~GpLSDr~GRk~vll~gl~lf~i 85 (394) T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGALQ-AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 4799999999999999998898609999999698998999-999999999999999999999882886999999999999 Q ss_pred HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH Q ss_conf 99985100110111002232100111111100012332100011112212233100011111111112222111111014 Q gi|254780967|r 81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160 (398) Q Consensus 81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~ 160 (398) T Consensus 86 ~s~~~a~a~si~~ll~~R~lQG~Ga~~~~v~~~AiirD~~~g~~~ak~~s~~~~~~~~~p~laP~iGg~-l~~~~gWr~~ 164 (394) T PRK11652 86 GTLVALTAHSLTVLIAASAIQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILFSPLLAPLIGGL-LTTLFGWRAC 164 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHHHH T ss_conf 999999876799999999982766510000999998863689999999999889999851026169999-9800559999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC Q ss_conf 56788888777788876167886402210111111233310000000002567778876310014688876545543153 Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240 (398) Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398) T Consensus 165 F~~l~~~~~~~~l~~~~~lpET~~~~~~~~----~~~~~y~~ll~~~~f~~~~l~~~~~~~~~~~f~~~~p~v~~~~~gl 240 (394) T PRK11652 165 YLFLLVFGAGVTFSMARWMPETLPKDARRT----RVLASYKTLLGNRRFNCYLLMLIATLAGIAVFEACAGVLMGAVLGL 240 (394) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCH----HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 999999999999999996888899645630----1899999998675799999999999999999999649999998279 Q ss_pred CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 11-01588998865767788999998500156512468877888999999998732577764037998998999999999 Q gi|254780967|r 241 GN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI 319 (398) Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (398) T Consensus 241 s~~~~g~~f~~~~~~~~~g~~l~~rl~~r~~~~--~~~g~~~~~~~~~~~l~~~~--~~~~~~~~l~~~~~l~~~g~G~~ 316 (394) T PRK11652 241 SSMTVSILFILPIPGYFFGAWFAGRPNKRFSTL--MWQSVICCLLGGLFMWIPGW--FGVMNVWTLLVPAALFFFGAGML 316 (394) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 889999999999999999999999999999999--99999999999999999998--87745999999999999999988 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH Q ss_conf 99999999853466769999999999999999999999999831179999999999999999999994220003 Q gi|254780967|r 320 NSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFR 393 (398) Q Consensus 320 ~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 393 (398) T Consensus 317 ~p~~~a~al~~~~~~aGtAsal~g~~q~~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~l~~r~~~~ 390 (394) T PRK11652 317 FPLATSGAMEPFPFLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQGSLGLLMTLMGLLILLCWLPLASRMSHQ 390 (394) T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 89999999764843030999999999999999999999971369768999999999999999999998634456 |
|
| >PRK11043 inner membrane transport protein YdhC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=418.40 Aligned_cols=384 Identities=18% Similarity=0.296 Sum_probs=333.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 38999999999988657669999999999819998899999999999999999999999986508289999999999999 Q gi|254780967|r 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS 81 (398) Q Consensus 2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 81 (398) T Consensus 6 ~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~q-ltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~ 84 (401) T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVS-ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG 84 (401) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 899999999999999999998429999999696999999-9999999999999999999998827879999999999999 Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 99851001101110022321001111111000123321000111122122331000111111111122221111110145 Q gi|254780967|r 82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161 (398) Q Consensus 82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f 161 (398) T Consensus 85 s~~~~~a~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l-~~~~gWr~iF 163 (401) T PRK11043 85 SLGMLWVESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWL-LNHFGWQAIF 163 (401) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHH T ss_conf 999998889999999999987310146788889998417899999999999999999999998899999-7047869999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC Q ss_conf 67888887777888761678864022101111112333100000000025677788763100146888765455431531 Q gi|254780967|r 162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241 (398) Q Consensus 162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398) T Consensus 164 ~~l~~~gvll~l~~~~~~~e~~~~~~------~~~~~~y~~lL~~r~F~~~~l~~~~~~~~~fayis~spfil~~~G~s~ 237 (401) T PRK11043 164 ATLFAITLLLILPTLWLKPSKKARNN------SQDGLTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIMEQMGYSP 237 (401) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCC------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH T ss_conf 99999999999999865887788875------423568999980868899999999999999999996699999929999 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 10158899886576778899999850015651246887788899999999873257776403799899899999999999 Q gi|254780967|r 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS 321 (398) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398) T Consensus 238 ~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~--~~~~~~~l~~~~~l~~~g~G~i~p 315 (401) T PRK11043 238 AVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLL--SHVSIVPILIPFCVMAAANGAIYP 315 (401) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999988089999999999999999999999987--042499999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH Q ss_conf 99999985346676999999999999999999999999983117999999999999999999999422000343 Q gi|254780967|r 322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT 395 (398) Q Consensus 322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 395 (398) T Consensus 316 n~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m~~~~~~~~l~~~l~r~~~~~~~~ 389 (401) T PRK11043 316 IVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVMLSTVVLVALGYKLQRHAEWGEFT 389 (401) T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999973481306099999999999999999999996536983799999999999999999998617750331 |
|
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=424.02 Aligned_cols=381 Identities=27% Similarity=0.563 Sum_probs=342.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 38999999999988657669999999999819998899999999999999999999999986508289999999999999 Q gi|254780967|r 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS 81 (398) Q Consensus 2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 81 (398) T Consensus 5 ~~~~~L~~L~~L~pl~~DMYLPa~p~i~~~L~~~as~vQ-~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~ 83 (400) T TIGR00710 5 AFVLLLGLLSILGPLGIDMYLPAFPEIAKDLSVSASLVQ-LTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALS 83 (400) T ss_pred HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH T ss_conf 999999898763202112521207898986287866899-9999999999998986523332036723889999999999 Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCH Q ss_conf 9985100110111002232100111111100012332100-011112212233100011111111112-22211111101 Q gi|254780967|r 82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD-GRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIG 159 (398) Q Consensus 82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~-~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~ 159 (398) T Consensus 84 Sl~~~~~~ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~Wha 163 (400) T TIGR00710 84 SLGLALSNNIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSWHA 163 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999985199999999999999989999999888502032578999999999999999878888869999998520999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC Q ss_conf 45678888877778887616788640221011111123331000000000256777887631001468887654554315 Q gi|254780967|r 160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ 239 (398) Q Consensus 160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398) T Consensus 164 IF~~L~l~~~~l~a~~f~~~pET~~~~~r~P~~~~~~~~~f~~l~k~k~~~gY~L~~ga~~g~~Faf~~~~Pfv~~~~~g 243 (400) T TIGR00710 164 IFAVLSLIGILLSALIFFLLPETLPKEKRIPLQISTSVETFLLLLKDKEFLGYALIYGASFGGFFAFLSGAPFVYIDIMG 243 (400) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999999999999999855122740103740300139998678876888999999999868789999841788640014 Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH---------HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH Q ss_conf 311-015889988657677889999985001565124688---------7788899999999873257776403799899 Q gi|254780967|r 240 LGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYS---------LLIFFMITGSWLLVQITSNHPIHLLIFIAFF 309 (398) Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (398) T Consensus 244 Vsp~~fg~lf~~~~~a~i~g~f~~gr~~~k~~~~~~lr~~~GfifslCGl~~~~~--~a~~l~~~~~~~l~~~~~~i~~~ 321 (400) T TIGR00710 244 VSPSVFGLLFALNIIAMIFGGFLNGRFIKKIGAKSLLRIAVGFIFSLCGLVLFIV--SAVLLVITALLGLGSWLLIIGPM 321 (400) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 6567789999999999999999998666543100147899999999999999999--99999999998679999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8999999999999999998534667699999999999999999999999-998311799999999999999999999 Q gi|254780967|r 310 FLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIG-QSFNGTTYPITIGFFGIAVSSFICILI 385 (398) Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (398) T Consensus 322 ~~~~~g~~~~~s~a~~~AL~~f~h~aGtA~al~g~l~~~l~a~vg~lvs~~i~~~Ta~p~~~~~~~~av~~vl~~y~ 398 (400) T TIGR00710 322 IFVGIGVSMVSSIAMALALEKFPHVAGTASALLGTLRLVLGAIVGLLVSSLIKINTAWPMVLSCLVLAVISVLAFYY 398 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99997688999999999862158741019999999999999999999997516761489999999999999999973 |
Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=407.29 Aligned_cols=375 Identities=24% Similarity=0.481 Sum_probs=333.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH Q ss_conf 98865766999999999981999889999999999999999999999998650828999999999999999851001101 Q gi|254780967|r 13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT 92 (398) Q Consensus 13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~ 92 (398) T Consensus 2 l~pl~~d~~lPalp~i~~~~~~s~~~~~-~~~s~~~l~~a~~~l~~G~lsD~~GRr~~~~~~~~~~~i~~~~~~~a~~~~ 80 (377) T PRK11102 2 LMPLAIDMYLPALPVIAADFGVSAGSVQ-MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTID 80 (377) T ss_pred CCHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH T ss_conf 5228987999869999999794998999-999999999999999999999981888999999999999999999856799 Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 11002232100111111100012332100011112212233100011111111112222111111014567888887777 Q gi|254780967|r 93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFIT 172 (398) Q Consensus 93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~ 172 (398) T Consensus 81 ~l~~~R~lqG~~~~~~~~~~~a~i~d~~~~~~~~~~~~~~~~~~~~~~~~~p~iGg~l-~~~~gWr~~F~~~~~~~~l~~ 159 (377) T PRK11102 81 QLIVMRFLQGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGYL-LVWFSWHSIFWVLALAAILAS 159 (377) T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHH T ss_conf 9999999986530013058899999707999999987999999997048888877999-813566899999999999999 Q ss_pred HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHH Q ss_conf 8887616788640221011111123331000000000256777887631001468887654554315311-015889988 Q gi|254780967|r 173 LWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVG 251 (398) Q Consensus 173 ~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 251 (398) T Consensus 160 ~l~~~~lpet~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~f~~~~p~~~~~~~gls~~~~gl~~~~~ 239 (377) T PRK11102 160 ALVFFLIPETLPPENRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEIYGVSPQNFGYYFALN 239 (377) T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH T ss_conf 99999754457844678877999999999999586899999999999999999998347999998299989999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 65767788999998500156512468877888999999998732577764037998998999999999999999998534 Q gi|254780967|r 252 GFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPF 331 (398) Q Consensus 252 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398) T Consensus 240 ~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~~~~~~---~~~~~~~~i~~~l~~~~~g~~~~~~~a~a~~~~ 316 (377) T PRK11102 240 IVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAFVGCISMISSNAMAVILDEF 316 (377) T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999999999999999588999999999999999999999998---777999999999999999999999999997667 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH Q ss_conf 6676999999999999999999999999983117999999999999999999999422000 Q gi|254780967|r 332 SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMF 392 (398) Q Consensus 332 ~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (398) T Consensus 317 p~~aG~Asal~g~~~~~~ga~~~~l~~~~~~~~~~~l~~~~~~~~~la~l~~l~~~R~~~~ 377 (377) T PRK11102 317 PHMAGTASSLAGTLRFGIGAIVGALLSLAPFNSAWPMIWSMAFCSILSILFYLYASRPKKK 377 (377) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 1177999999999999999999999998537987999999999999999999999073579 |
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=311.41 Aligned_cols=382 Identities=15% Similarity=0.134 Sum_probs=270.9 Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH Q ss_conf 38999999999---988657669999999999819998899999999999999999999999986508289999999999 Q gi|254780967|r 2 EFVIVIAMLMA---INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIH 78 (398) Q Consensus 2 ~~i~~l~~~~~---~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~ 78 (398) T Consensus 12 ~~~~v~~l~~~~~~~d~~D~~~~g~~~p~i~~e~~ls~~~~G-~l~s~~~~g~~ig~~~~G~LaDr~Grr~vl~~~~~~~ 90 (406) T PRK11551 12 RLALTIGLCFAVALLEGLDLQSAGVAAPRMAREFGLDVAQMG-WAFSAGILGLLPGALLGGRLADRIGRKRVLIVSVALF 90 (406) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 099999999999999999999999999999998593998999-9999999999999999999999976299999999999 Q ss_pred HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999851001101110022321001111111000123321000111122122331000111111111122221111110 Q gi|254780967|r 79 IISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI 158 (398) Q Consensus 79 ~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr 158 (398) T Consensus 91 ~i~~~l~a~a~s~~~l~~~R~l~Gig~g~~~p~~~~~i~e~~p~~~Rg~a~~~~~~g~~~G~~~~~~l~~~l-~~~~gWR 169 (406) T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGLGLGGALPNLIALTSEAAGPRLRGTAVSLMYCGVPFGGALASVIGVLA-AGDAEWR 169 (406) T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-HHCCCHH T ss_conf 999999971588999999999997234100117798878747899976676032344430689999999999-6012599 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHCCHHHHHHHHHHHH Q ss_conf 145678888877778887616788640221011111123331000000---00025677788763100146888765455 Q gi|254780967|r 159 GIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKH---RASTLYNIANSLTMGAILGFVNSSQQIYV 235 (398) Q Consensus 159 ~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (398) T Consensus 170 ~~f~i~gi~~~i~~~~~~~~l~es~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~wlP~~l~ 248 (406) T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAFLQAAGVGAAQ-AGVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLI 248 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC-CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999878980046646533221-235889861227999999999999999999999999999999 Q ss_pred HHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH Q ss_conf 431531-1015889988657677889999985001565124688778889999999987325777640379989989999 Q gi|254780967|r 236 GIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF 314 (398) Q Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (398) T Consensus 249 ~~-g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~---~l~~~~~~~----~~~~~~~~~~~~g~ 320 (406) T PRK11551 249 AQ-GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPSRVVLGMYAGILA---SLAALAAAP----GFAGMALAGFAAGL 320 (406) T ss_pred HC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH---HHHHHHHHH----HHHHHHHHHHHHHH T ss_conf 85-99888999999999999999999999999883639999999999999---999999987----79999999999999 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHCCHH Q ss_conf 999999999999985346-676999999999999999999999999983117-9999-9999999999999999942200 Q gi|254780967|r 315 QFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPIT-IGFFGIAVSSFICILIVEKNQM 391 (398) Q Consensus 315 ~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 391 (398) T Consensus 321 ~~~~~~~~~~~~~~e~~p~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~~~~~~~~~~~~~~~~~~l~l~~~~~ 400 (406) T PRK11551 321 FVVGGQSVLYALAPLFYPTQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTAGVIGASIPVILVAALAALLLVSRPS 400 (406) T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 99999999999999878598999999999999999999999999999981188999999999999999999999849976 Q ss_pred HHH Q ss_conf 034 Q gi|254780967|r 392 FRK 394 (398) Q Consensus 392 ~r~ 394 (398) T Consensus 401 r~~ 403 (406) T PRK11551 401 RAD 403 (406) T ss_pred CCC T ss_conf 579 |
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=307.35 Aligned_cols=375 Identities=13% Similarity=0.167 Sum_probs=277.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999886576699999999998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 7 ~Lal~~F~~gt~Ef~~~GlLp~ia~~l~vs~~~aG-~lvt~yal~~ai~~p~~~~l~~r~~Rk~~ll~~l~~f~~~~~l~ 85 (389) T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAG-HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (389) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH T ss_conf 99999999988889799435989978599989999-99999999999999999999823680999999999999999999 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111101456788 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG 165 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~ 165 (398) T Consensus 86 a~a~~~~~ll~~R~l~G~~~g~~~~~~~~~~~~~~p~~~~g~a~a~v~~g~s~a~v~G~p~g~~-l~~~~gWR~~F~~~~ 164 (389) T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIDPGKVTAAVAGMVSGMTVANLFGIPLGTY-LSQEFSWRYTFLLIA 164 (389) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHH T ss_conf 9868899999999999966579999999999996887789999999999999999999999999-987448899999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCH Q ss_conf 8887777888761678864022101111112333100000000025677788763100146888765455431531-101 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLF 244 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (398) T Consensus 165 ~l~~~~~~~~~~~lP~~~~~~~~---~----~~~~~~~l~~~~~~~~~~~~~l~~~~~f~~~tyi~p~L~~~~g~s~~~i 237 (389) T PRK10091 165 VFNIAVLASIWFWVPDIRDEADG---G----LREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSM 237 (389) T ss_pred HHHHHHHHHHHHHCCCCCCCCCC---C----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH T ss_conf 99999999999978999887889---8----5889988368199999999999999999999999999998429997799 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 58899886576778899999850015651246887788899999999873257776403799899899999999999999 Q gi|254780967|r 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS 324 (398) Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (398) T Consensus 238 ~~~l~~~Gig~i~G~~l~Grl~Dr~g~~~~~~~~~~~~~~~l---l~l~~~~~---~~~~~~v~~~l~~~~~~~~~~~~q 311 (389) T PRK10091 238 TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLAL---LMLFFFGG---MKTTSLIFAFICCAGLFALSAPLQ 311 (389) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999762274159999999999999---99999887---699999999999999999779999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHH Q ss_conf 9998534667699999999999999999999999998311-799-9999999999999999999422000343 Q gi|254780967|r 325 SISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-TYP-ITIGFFGIAVSSFICILIVEKNQMFRKT 395 (398) Q Consensus 325 ~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 395 (398) T Consensus 312 ~~~~~~a~~~~~~a~al~~sa~nlGialGs~~GG~~l~~g~g~~~~~~~ga~l~~~al~~~l~~~r~~r~~~~ 384 (389) T PRK10091 312 ILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGLMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAA 384 (389) T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9999878897668999999999999999999999999769994038999999999999999999876502311 |
|
| >PRK03545 sugar efflux transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=306.66 Aligned_cols=378 Identities=15% Similarity=0.139 Sum_probs=280.2 Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 38999999999988657669--9999999998199988999999999999999999999999865082899999999999 Q gi|254780967|r 2 EFVIVIAMLMAINSLGIDII--LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI 79 (398) Q Consensus 2 ~~i~~l~~~~~~~~~~~~~~--~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~ 79 (398) T Consensus 7 ~w~~v~~L~~~~F~~~~~e~~~~glLp~ia~dl~vs~~~aG-~lvt~yal~~ai~~p~~~~l~dr~~Rr~~ll~~l~~f~ 85 (390) T PRK03545 7 AWLRVVALALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVG-LMLTIYAWVVALMSLPFMLLTSQVERRKLLLGLFVLFI 85 (390) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH T ss_conf 57999999999999998899899717999978299999999-99999999999999999999701684999999999999 Q ss_pred HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH Q ss_conf 99998510011011100223210011111110001233210001111221223310001111111111222211111101 Q gi|254780967|r 80 ISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG 159 (398) Q Consensus 80 i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~ 159 (398) T Consensus 86 ~~~~l~a~a~s~~~Ll~~R~l~Gi~~a~~~~~a~a~~~~l~p~~~rg~a~g~v~~G~slg~vlG~plg~-~l~~~~gWr~ 164 (390) T PRK03545 86 ASHVLSGLAWSFTVLLISRIGIAFAHAVFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGR-VVGQALGWRT 164 (390) T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHH T ss_conf 999999997639999999999861038888889999999778555778999999999999999764489-9988628089 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC Q ss_conf 45678888877778887616788640221011111123331000000000256777887631001468887654554315 Q gi|254780967|r 160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ 239 (398) Q Consensus 160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398) T Consensus 165 ~F~~~~vl~~~~~l~~~~~lP~~~~~~~-------~~~~~~~~~l~~~~ll~~~~~~~l~~~~~f~~~~yi~p~l~~~~g 237 (390) T PRK03545 165 TFLAIGGVALITLLLLIKLLPLLPSENS-------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQNVAG 237 (390) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 9999999999999999997788877677-------666679999728899999999999999999999999999987059 Q ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 31-10158899886576778899999850015651246887788899999999873257776403799899899999999 Q gi|254780967|r 240 LG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGL 318 (398) Q Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (398) T Consensus 238 ~s~~~~~~~l~~~Gia~~~g~~~~grl~dr~~~~~~~~~-~~ll~~~---~~~l~~~~---~~~~~~~~~~~l~g~~~~~ 310 (390) T PRK03545 238 LSANFATALLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVC---LLLLLPAA---NSEWHLSVLSIFWGIAIMC 310 (390) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHH---HHHHHHHH---HHHHHHHHHHHHHHHHHHH T ss_conf 988899999999999999999999999884210199999-9999999---99999988---7899999999999999998 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHCCHHHHHH Q ss_conf 999999999853466769999999999999999999999999831179999-9999999999999999-9422000343 Q gi|254780967|r 319 INSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPIT-IGFFGIAVSSFICILI-VEKNQMFRKT 395 (398) Q Consensus 319 ~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~r~~ 395 (398) T Consensus 311 ~~~~~q~~~~~~ap~~~~~a~al~~s~~~lG~~lG~~lgG~~~~~~G~~~~~~~ga~~~~~al~~~~~~~Rr~r~~~~~ 389 (390) T PRK03545 311 IGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAVLALAALVWAIFIFRRFRAVTLE 389 (390) T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 7899999999878896789999999999999999999999999822746899999999999999999999886415678 |
|
| >PRK10504 multidrug efflux system protein MdtE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=302.57 Aligned_cols=379 Identities=17% Similarity=0.183 Sum_probs=285.2 Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 38999-99999998865766999999999981999889999999999999999999999998650828999999999999 Q gi|254780967|r 2 EFVIV-IAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398) Q Consensus 2 ~~i~~-l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398) T Consensus 9 rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~-Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~~gl~~F~~ 87 (471) T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMH-MVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTL 87 (471) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 7999999999999999997999999999998698873799-999999999999999999999994877999999999999 Q ss_pred HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH Q ss_conf 99985100110111002232100111111100012332100011112212233100011111111112222111111014 Q gi|254780967|r 81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160 (398) Q Consensus 81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~ 160 (398) T Consensus 88 gSllca~A~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~l~-~~~~Wrwi 166 (471) T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGLLV-EYASWHWI 166 (471) T ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC-CCHHHHHH T ss_conf 99999971778999999999852762102303410342377688999999999999999885312100101-10102359 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC---------------------CC--------------------- Q ss_conf 567888887777888761678864022101111112---------------------33--------------------- Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAI---------------------LH--------------------- 198 (398) Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~---------------------~~--------------------- 198 (398) T Consensus 167 F~invPi~ii~~~~~~~~~p~~~~~~~~--~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~ 244 (471) T PRK10504 167 FLINIPVGIIGAIATLMLMPNYTMQTRR--FDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVVALVLYLLH 244 (471) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 8760699999999999948876655566--78287999999999999999267777754699999999999999999999 Q ss_pred --------CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf --------310000000002567778876310014688876545543153110-15889988657677889999985001 Q gi|254780967|r 199 --------SFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKF 269 (398) Q Consensus 199 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~ 269 (398) T Consensus 245 ~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~lQ~~~G~Sp~~aGl~llP~~~~~~~~~~~~g~l~~r~ 324 (471) T PRK10504 245 ARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF 324 (471) T ss_pred HHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 98189886498993631699999999999999999999999999996598899999999999999999999999998860 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH Q ss_conf 565124688778889999999987325777640379989989999999999999999985346-6769999999999999 Q gi|254780967|r 270 GIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTV 348 (398) Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~ 348 (398) T Consensus 325 G~r~~l~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~~~~rql 400 (471) T PRK10504 325 GYRRVLVATTLGLALVSL--LFMTVA--LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL 400 (471) T ss_pred CCHHHHHHHHHHHHHHHH--HHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH T ss_conf 835899999999999999--999870--3454999999999999999999999999998639977416499999999999 Q ss_pred HHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999999999831------------1799999999999999999999942 Q gi|254780967|r 349 ISTILGIIIGQSFNG------------TTYPITIGFFGIAVSSFICILIVEK 388 (398) Q Consensus 349 ~~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (398) T Consensus 401 g~slGvAv~g~~l~~~~~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~~~r 452 (471) T PRK10504 401 SMSIGVTIAGLLLGLFGSQHVSVDSGATHTVFMYTWLCMAVIIALPALIFAR 452 (471) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999999999986024567653025778999999999999999999822 |
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=303.76 Aligned_cols=381 Identities=15% Similarity=0.125 Sum_probs=277.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH Q ss_conf 99886576699999999998199988999999999999999999999999865082899999999999999985100110 Q gi|254780967|r 12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF 91 (398) Q Consensus 12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~ 91 (398) T Consensus 33 ~~~y~~R~~~s~~~p~i~~e~glt~~q~G-~i~s~f~~~Yal~q~~~G~L~Dr~g~r~~l~~~~~~~~~~~~~~g~~~~~ 111 (434) T PRK11663 33 ALFYFTRKSFNAAMPEMLADLGLSRSDIG-LLATLFYITYGVSKFVSGIVSDRSNPRYFMGIGLIATGIINILFGFSSSL 111 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH T ss_conf 99998605799869999988497998999-99999999999999767999987064499999999999999999974328 Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 11100223210011111110001233210001111221223310001111111111222211111101456788888777 Q gi|254780967|r 92 TGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI 171 (398) Q Consensus 92 ~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~ 171 (398) T Consensus 112 ~~~~~~r~l~G~~~~~~~p~~~~~i~~Wfp~~eRg~a~gi~~~~~~vG~~l~~~l~~~i-~~~~gWr~~F~~~g~~~~v~ 190 (434) T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI-ALHYGWRYGMIIAGIIAIVV 190 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHH T ss_conf 99999999999985601689999999984888899999999999877788889999999-99806299999999999999 Q ss_pred HHHHHHHCCCCCCHH------H----H-C-CCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH Q ss_conf 788876167886402------2----1-0-1111112333-----10000000002567778876310014688876545 Q gi|254780967|r 172 TLWYYIRFPETLDPR------D----V-R-PLNLYAILHS-----FSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY 234 (398) Q Consensus 172 ~~~~~~~~pet~~~~------~----~-~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398) T Consensus 191 ~~~~~~~~~d~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~WlP~yL 270 (434) T PRK11663 191 GLFLCWRLRDRPQAMGLPSVGEWRHDALELAQEQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYL 270 (434) T ss_pred HHHHHHHCCCCHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH T ss_conf 99999832688766499971121023455543302457758999999996488999999999999999999983265888 Q ss_pred HHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 54315311-01588998865767788999998500156512468877888999999998732577764037998998999 Q gi|254780967|r 235 VGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS 313 (398) Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398) T Consensus 271 ~~~~g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~l~~~G 348 (434) T PRK11663 271 SETLGYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAGIFLSVGSLWLM-PF-ASYVMQAACFFTIG 348 (434) T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC-CC-CHHHHHHHHHHHHH T ss_conf 87608889999999999999999999988899998734773189999999999999999983-63-12999999999999 Q ss_pred H-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCH Q ss_conf 9-9999999999999853-4667699999999999999999999999998311799999-99999999999999994220 Q gi|254780967|r 314 F-QFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITI-GFFGIAVSSFICILIVEKNQ 390 (398) Q Consensus 314 ~-~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 390 (398) T Consensus 349 ~~~~g~-~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~gw~~~f~~l~~~a~v~~~illp~~~~~ 427 (434) T PRK11663 349 FFVFGP-QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434) T ss_pred HHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 999989-9999999998368210237989988999999999999999999703858999999999999999999981767 Q ss_pred HHHHHHC Q ss_conf 0034306 Q gi|254780967|r 391 MFRKTEL 397 (398) Q Consensus 391 ~~r~~~~ 397 (398) T Consensus 428 ~p~~~~~ 434 (434) T PRK11663 428 APREAQE 434 (434) T ss_pred CCCCCCC T ss_conf 8764459 |
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=290.26 Aligned_cols=378 Identities=15% Similarity=0.097 Sum_probs=261.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 9999999999886576699999999998199988999----999999999999999999999865082899999999999 Q gi|254780967|r 4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYG----QHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI 79 (398) Q Consensus 4 i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~----~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~ 79 (398) T Consensus 14 l~~l~~~~f~~~~g~~~i~P~lP~y~~~lg~~~~~~~~~~~Gli~s~~~l~~~i~sp~~G~lsDr~GRK~ill~gl~~~~ 93 (406) T PRK09874 14 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 93 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf 99999999999999999999999999994998077999999999999999999999999999998064899999999999 Q ss_pred HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH Q ss_conf 99998510011011100223210011111110001233210001111221223310001111111111222211111101 Q gi|254780967|r 80 ISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG 159 (398) Q Consensus 80 i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~ 159 (398) T Consensus 94 i~~~l~~~a~s~~~ll~~R~l~Gi~~~-~~~~a~a~iad~~p~~~rg~~~g~~~~~~~~G~~~GP~iGg~l-~~~~g~~~ 171 (406) T PRK09874 94 IVMVLMGMAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL-ADHYGLRP 171 (406) T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCHHH T ss_conf 999999873609999999999987055-0888999999846775699999999999998888887679999-99736299 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH Q ss_conf 45678888877778887616788640221011-1111233310000000002567778-876310014688876545543 Q gi|254780967|r 160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPL-NLYAILHSFSLIFKHRASTLYNIAN-SLTMGAILGFVNSSQQIYVGI 237 (398) Q Consensus 160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (398) T Consensus 172 ~F~~~a~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~~ 247 (406) T PRK09874 172 VFFITASVLFLCFLVTLFCIREKFQPVSKKEMLHVREV----VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVREL 247 (406) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH----HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999863645688542111206689----98853536999999999999999999999999999998 Q ss_pred CCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 15311----01588998865767788999998500156512468877888999999998732577764037998998999 Q gi|254780967|r 238 YQLGN----LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS 313 (398) Q Consensus 238 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398) T Consensus 248 ~~~~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~~~~~~~l~---~l~~~~----~~~~l~i~~~l~G 320 (406) T PRK09874 248 AGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIISVLLLI---PMSFVQ----TPLQLGILRFLLG 320 (406) T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHH----HHHHHHHHHHHHH T ss_conf 365444999999999999999999999999999873839999999999999999---999997----5999999999999 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHH Q ss_conf 999999999999998534-667699999999999999999999999998311799999999999999999-999942200 Q gi|254780967|r 314 FQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFIC-ILIVEKNQM 391 (398) Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 391 (398) T Consensus 321 ~g~g~~~P~~~~~~~~~~~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~~~G~~~--~f~i~a~~~l~~~~~~~~~~r~ 398 (406) T PRK09874 321 AADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRA--VFLVTAGVVLFNAIYSWNSLRR 398 (406) T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999875888477799999999999999999999999999748599--9999999999999999998843 Q ss_pred HHHHH Q ss_conf 03430 Q gi|254780967|r 392 FRKTE 396 (398) Q Consensus 392 ~r~~~ 396 (398) T Consensus 399 ~r~~~ 403 (406) T PRK09874 399 RRIPQ 403 (406) T ss_pred CCCCC T ss_conf 43665 |
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=292.70 Aligned_cols=389 Identities=13% Similarity=0.149 Sum_probs=271.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999999988657669999999999819998899999999999999999999999986508289999999999999998 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 32 ~~lfi~y~~~Y~dR~~~sva~p~i~e~-gls~~q~G-~i~S~F~~~Yal~q~~~G~l~Dr~g~r~~l~~gl~~~s~~~~l 109 (452) T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLG-FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF 109 (452) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 999999999998115899878999882-99988999-9999999999999861277786057429999999999999999 Q ss_pred HHCC----CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH Q ss_conf 5100----110111002232100111111100012332100011112212233100011111111112222111111014 Q gi|254780967|r 85 MVTI----NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160 (398) Q Consensus 85 ~~~a----~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~ 160 (398) T Consensus 110 ~G~~~~~~~s~~~~~~lr~l~G~~eg~~~p~~~k~i~~WFp~~eRg~a~gi~~~~~~vG~~l~~~l~~~~~~~~~gWr~~ 189 (452) T PRK11273 110 MGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAA 189 (452) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH T ss_conf 99998788799999999999886520101899999999779989999999999986789999999999999997469999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCH------HHHC---CC---C-CCC---C-CCCCCCCCCCCHHHHHHHHHHHHHHCC Q ss_conf 5678888877778887616788640------2210---11---1-111---2-333100000000025677788763100 Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDP------RDVR---PL---N-LYA---I-LHSFSLIFKHRASTLYNIANSLTMGAI 223 (398) Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~------~~~~---~~---~-~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (398) T Consensus 190 F~i~g~~~l~~~v~~~~~~~d~P~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~w~l~l~~~~~~~~~ 269 (452) T PRK11273 190 LYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 269 (452) T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 99999999999999999823782105999667774201111332111223256788999804608999999999999999 Q ss_pred HHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 1468887654554315311-015889988657677889999985001565124688778889999999987325777640 Q gi|254780967|r 224 LGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHL 302 (398) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (398) T Consensus 270 yg~~~WlP~YL~~~~g~s~~~~~~~~~l~~~~g~~G~l~~G~lSDrl~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 348 (452) T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN-PT 348 (452) T ss_pred HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC-HH T ss_conf 99715389999862488888887999999999999899899999998736733999999999999999999704566-99 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHH Q ss_conf 379989989999999999999999985346-6769999999999999999999-99999983117999-99999999999 Q gi|254780967|r 303 LIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILG-IIIGQSFNGTTYPI-TIGFFGIAVSS 379 (398) Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~~~~~~~ 379 (398) T Consensus 349 ~~~~~l~~~Gf~~~g~~-~l~~~~a~d~~p~~~~Gt~~G~~n~~g~lgGai~~~~~~G~l~d~~Gw~~~F~~l~~~~~~a 427 (452) T PRK11273 349 VDMACMIVIGFLIYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA 427 (452) T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 99999999999999999-99999999856773678999998789998999998989999677547789999999999999 Q ss_pred HHHHHHHHCCHHHHHHHC Q ss_conf 999999942200034306 Q gi|254780967|r 380 FICILIVEKNQMFRKTEL 397 (398) Q Consensus 380 ~~~~~~~~~~~~~r~~~~ 397 (398) T Consensus 428 ~i~l~~~~~~e~r~~~~~ 445 (452) T PRK11273 428 VILLIVVMIGEKRHHEEL 445 (452) T ss_pred HHHHHHHHHHHHHHHHHH T ss_conf 999999997776515888 |
|
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=270.53 Aligned_cols=378 Identities=12% Similarity=0.072 Sum_probs=275.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 9999999988657669999999-999819998899999999999999999999999986508289999999999999998 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 14 ~L~~~~~l~~lG~~mv~Pfl~iyl~~~lg~s~~~iG-lil~~~~l~~~~~~~~~G~LsDR~GrK~vii~gl~~~a~~~~~ 92 (400) T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVG-IALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999860799889999-9999999999999861468888618819999999999999999 Q ss_pred HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 51001101110022321001111111000123321000111122122331000111111111122221111110145678 Q gi|254780967|r 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM 164 (398) Q Consensus 85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~ 164 (398) T Consensus 93 ~a~a~s~~~l~~~~~l~G~g~~~~~pa~~Aliad~t~~~~R~~~f~l~~~a~niG~~iGpllGg~l~~--~~~~~~f~~~ 170 (400) T PRK11646 93 MGIAHEPWLLWFSCILSGLGGTLFDPPRSALVIKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--YDFRLVCATG 170 (400) T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH T ss_conf 99973599999999999998564679999999970887689999999999999999999999999998--6489999999 Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH Q ss_conf 88887777888761678864022101111112333100000000025677788763100146888765455431531101 Q gi|254780967|r 165 GVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF 244 (398) Q Consensus 165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (398) T Consensus 171 a~~~~l~~~~~~~~~p~~~~~~~~-----~~~~~~~~~vl~dr~f~~~~l~~~~~~~~~~q~~~~lpl~~~~~~~~~~~~ 245 (400) T PRK11646 171 AVLFVLAAAFNAWLLPAYKLSTVR-----TPVREGMTRVLRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDIAGSPSAV 245 (400) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCC-----CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH T ss_conf 999999999999957866666667-----636778999972688999999999999999999999999999855878999 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 58899886576778899-99985001565124688778889999999987325777640379989989999999999999 Q gi|254780967|r 245 PIAFAVGGFAMSIASFI-NSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF 323 (398) Q Consensus 245 ~~~~~~~~~~~~~~~~~-~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398) T Consensus 246 g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~---~~~~~~~----~~~~~~i~~~lftiGe~l~~P~~ 318 (400) T PRK11646 246 KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM---FPIGMVS----NLQQLFTLICLFYIGSIIAEPAR 318 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999985472999999999999999---9999998----89999999999999999997548 Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH Q ss_conf 999985346-67699999999999999999999999998311------79999999999999999999994220003430 Q gi|254780967|r 324 SSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGT------TYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396 (398) Q Consensus 324 ~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 396 (398) T Consensus 319 ~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~~~W~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 398 (400) T PRK11646 319 ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPELPWMMLGIIGIITLLALGWQFSQKRIARRML 398 (400) T ss_pred HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999838965432376299999999999889899999955302489857999999999999999999998999986551 Q ss_pred CC Q ss_conf 69 Q gi|254780967|r 397 LR 398 (398) Q Consensus 397 ~r 398 (398) T Consensus 399 ~~ 400 (400) T PRK11646 399 ER 400 (400) T ss_pred CC T ss_conf 39 |
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=267.27 Aligned_cols=350 Identities=19% Similarity=0.209 Sum_probs=253.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 9999999998865766999999999-981999889999999999999999999999998650828999999999999999 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKIS-DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF 83 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~-~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 83 (398) T Consensus 20 ~~i~~~~Fl~~l~~g~~~PvlP~y~~~~lg~s~~~iG-li~~~f~l~~~i~~p~~G~lsDr~GRk~vll~gl~~~~l~~~ 98 (395) T PRK05122 20 VSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAVVAG-LVISLQYFATLLSRPHAGRLADTLGPKKAVVFGLCGCFLSGL 98 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 9999999999999986999899999974799698999-999999999999999899999834862989999999999999 Q ss_pred HHHCCC--------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC Q ss_conf 851001--------101110022321001111111000123321000111122122331000111111111122221111 Q gi|254780967|r 84 IMVTIN--------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG 155 (398) Q Consensus 84 ~~~~a~--------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~ 155 (398) T Consensus 99 ~~~~a~~~~~~~~~~l~~L~~~R~l~Gi~~a~~~~a~~a~~~~~~p~~rrg~~mg~~g~~~~lg~~iGP~iG~~-l~~~~ 177 (395) T PRK05122 99 LYLLAGLLAAWPVLSLLLLLAGRLLLGIGESLAGTGSILWGIGRVGSEHTGRVISWNGIATYGALAIGAPLGVL-LYHWG 177 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH T ss_conf 99999875200377999999999998989999999999999861689889999999999999999999999999-99972 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH Q ss_conf 11014567888887777888761678864022101111112333100000000025677788763100146888765455 Q gi|254780967|r 156 GWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV 235 (398) Q Consensus 156 gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (398) T Consensus 178 g~~~~f~~~~~l~~~~~~~~~-~~~~~~~~~~-~~~~-------~~~~~~~--~~~~~~~~~l~~~~~~~i~~f~~ly~~ 246 (395) T PRK05122 178 GLAALGLLIMLLALLGLLLAR-PRPPVPPVKG-ERLP-------FRRVLGR--VWPYGMGLALASIGFGTIATFITLYYA 246 (395) T ss_pred CHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCC-CCCC-------HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 699999999999999999971-2789987677-7887-------8999998--899999999999999999999999998 Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH Q ss_conf 43153110158899886576778899999850015651246887788899999999873257776403799899899999 Q gi|254780967|r 236 GIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQ 315 (398) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (398) T Consensus 247 ~~-g~~~-~~~~~~~~~~~~~~~r~~~g~l~dr~g~~~~i~~~~~l~~~~l---~ll~~~~----~~~~ll~a~~l~G~G 317 (395) T PRK05122 247 AR-GWDG-AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLAVEILGL---LLLWLAP----SPWVALIGAALTGFG 317 (395) T ss_pred HC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHHHHHHHHH T ss_conf 82-7313-6999999999999999983278786064489999999999999---9999872----099999999999999 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999985346-67699999999999999999999999998311799999999999 Q gi|254780967|r 316 FGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIA 376 (398) Q Consensus 316 ~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 376 (398) T Consensus 318 ~g~~~P~l~a~~~~~~p~~~rG~a~g~~~~~~dlG~~iG~~l~G~la~~~G~~~~f~~~a~~ 379 (395) T PRK05122 318 FSLVFPALGVEAVKRVPPQNRGAALGAYSVFFDLSLGITGPLAGLVASWFGYPSIFLFAALA 379 (395) T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 98888999999986498724579999999999999999999999999973836899999999 |
|
| >PRK12382 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=250.47 Aligned_cols=362 Identities=15% Similarity=0.126 Sum_probs=249.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 9999999998865766999999999-981999889999999999999999999999998650828999999999999999 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKIS-DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF 83 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~-~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 83 (398) T Consensus 18 ~~l~~~~F~~~~g~~~~~PvlP~y~~~~LGas~~~vG-li~~~f~la~~~~~p~~G~l~Dr~GRk~vll~gl~~~a~~~l 96 (393) T PRK12382 18 FRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVG-IAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (393) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 9999999999999987999999999973698688999-999999999999999888999804970899999999999999 Q ss_pred HHHCCC--------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC Q ss_conf 851001--------101110022321001111111000123321000111122122331000111111111122221111 Q gi|254780967|r 84 IMVTIN--------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG 155 (398) Q Consensus 84 ~~~~a~--------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~ 155 (398) T Consensus 97 ly~~a~~~~~~~~~~~~~L~~~R~l~G~~~a~~~~~~~a~~~d~~p~~~rG~~mg~~g~~~~~g~aiGp~lG~~l-~~~~ 175 (393) T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPQHSGKVMSWNGMAMYGALAAGAPLGLLI-HSHF 175 (393) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH T ss_conf 999998877767899999999999989889999998999999864733232898998899999999999899999-9986 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH Q ss_conf 11014567888887777888761678864022101111112333100000000025677788763100146888765455 Q gi|254780967|r 156 GWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV 235 (398) Q Consensus 156 gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (398) T Consensus 176 g~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~----~~~~~~~~------~~~~~~l~~~l~~~~~~~i~~f~~ly~~ 244 (393) T PRK12382 176 GFAALALTTMVLPLLAWAFN-GTVRKVPALAGER----PSLWSVVG------LIWKPGLGLALQGVGFAVIGTFVSLYFA 244 (393) T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCC----CCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 69999999999999999983-4577887655556----65899999------9999899999999999999999999998 Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH Q ss_conf 43153110158899886576778899999850015651246887788899999999873257776403799899899999 Q gi|254780967|r 236 GIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQ 315 (398) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (398) T Consensus 245 ~-~~~~-~~g~~~~~~~~~~~l~r~~~G~l~Dr~G~~~v~~~gl~l~a~gl---~~l~~~~----~~~~ll~~~~l~G~G 315 (393) T PRK12382 245 S-KGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGL---LLLWLAP----TAWVALAGAALTGAG 315 (393) T ss_pred H-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHC----CHHHHHHHHHHHHHH T ss_conf 7-3606-89999999999999999998289887085388999999999999---9999862----099999999999999 Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC Q ss_conf 9999999999998534-6676999999999999999999999999983117999999-99999999999999942 Q gi|254780967|r 316 FGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG-FFGIAVSSFICILIVEK 388 (398) Q Consensus 316 ~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 388 (398) T Consensus 316 ~g~~~P~l~al~~~~~~~~~rG~a~g~~~~~~dlG~~~Gp~~~G~va~~~G~~~~F~~~av~~l~~l~v~~~~~r 390 (393) T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIGVTILSFR 390 (393) T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 988788899999975893310379999999999999999999999999749389999999999999999999963 |
|
| >PRK10054 putative MFS-type transporter YdeE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=243.83 Aligned_cols=373 Identities=12% Similarity=0.100 Sum_probs=271.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 9999999886576699999999-998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 7 IAMLMAINSLGIDIILPCLPKI-SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 7 l~~~~~~~~~~~~~~~p~lp~i-~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 12 Ll~~~~l~~~g~~~~~Pfl~iYl~~~~gls~~~vG-~il~~~~~~~~~~~l~gG~L~DR~Grk~v~l~g~~~~a~~~~~l 90 (395) T PRK10054 12 LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIG-YAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999986299889999-99999999999988520144663284499999999999999999 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111101456788 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG 165 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~ 165 (398) T Consensus 91 ~~~~~~~~~~l~~~l~g~~~~~~~pa~~A~iaD~~~~~~R~~~f~l~y~~~NlG~aiGpllGg~l~~--~~~~~~F~~~a 168 (395) T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAA 168 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHH T ss_conf 9998899999999999999998999999999843887789899999999999999999999999999--65118999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC--CCC-C Q ss_conf 8887777888761678864022101111112333100000000025677788763100146888765455431--531-1 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY--QLG-N 242 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 242 (398) T Consensus 169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~l~dr~~~~~~~~~~l~~~~~~q~~~~l~~~~~~~~~~~~~~~ 244 (395) T PRK10054 169 ICSAFPLVFIQIWVKRSEKAIATETAS----VWSPKVLLRDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK 244 (395) T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCC----CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH T ss_conf 999999999999971456664455566----6773155225017999999999999999999998899999811465098 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 01588998865767788999998500156512468877888999999998732577764037998998999999999999 Q gi|254780967|r 243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN 322 (398) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (398) T Consensus 245 ~~~~l~~~N~v~Vv~lq~~v~r~~~~~~~~~~l~~G~ll~~~g~~~~~~---~~---~~~~~~~i~~~ifTiGE~i~~P~ 318 (395) T PRK10054 245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF---SG---NNLLFWGMSAAVFTVGEIIYAPG 318 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999998999999985168159999999999999999999---87---78999999999999999998655 Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH Q ss_conf 999998534-6676999999999999999999999999983117999999999999999999999422000343 Q gi|254780967|r 323 FSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT 395 (398) Q Consensus 323 ~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 395 (398) T Consensus 319 ~~~~v~~laP~~~RG~Y~g~~s-l~~lG~~igP~~gG~ll~~~~~--~~~f~~~~~~~~~~~l~~~~g~~~~~~ 389 (395) T PRK10054 319 EYMLIDNIAPPGMKASYFSAQS-LGWLGAAVNPLVSGVILTTLPP--WSLFVILALAIVAAWLLMLKGMRARPW 389 (395) T ss_pred HHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 9999987399340325898999-9999999999999999987266--699999999999999999726678864 |
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=240.54 Aligned_cols=369 Identities=19% Similarity=0.210 Sum_probs=271.8 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC Q ss_conf 69999999999819998899999999999999999999999986508289999999999999998510011011100223 Q gi|254780967|r 20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRL 99 (398) Q Consensus 20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~ 99 (398) T Consensus 47 nF~~a~p~l~e~~~lsk~~lG-~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~ 125 (448) T COG2271 47 NFNLAMPALIEDGGLSKTQLG-ILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWV 125 (448) T ss_pred HHHHCCHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 676306778874598989999-9999999999998887665214678754425879999999999862179999999999 Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 2100111111100012332100011112212233100011111111112-222111111014567888887777888761 Q gi|254780967|r 100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIGIFVCMGVITTFITLWYYIR 178 (398) Q Consensus 100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~ 178 (398) T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448) T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448) T ss_pred HHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98988527983778689987585456746887454442235057999999999754256567788789999999999999 Q ss_pred CCCCCCH------HHH--------CCCCCCC---CC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC Q ss_conf 6788640------221--------0111111---23-3310000000002567778876310014688876545543153 Q gi|254780967|r 179 FPETLDP------RDV--------RPLNLYA---IL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240 (398) Q Consensus 179 ~pet~~~------~~~--------~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398) T Consensus 206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~ 285 (448) T COG2271 206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF 285 (448) T ss_pred HCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 47991114999878860682223332025788649999999997280999999999999999999864278999980187 Q ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHH Q ss_conf 110-15889988657677889999985001565124688778889999999987325777640379989989999-9999 Q gi|254780967|r 241 GNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF-QFGL 318 (398) Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (398) T Consensus 286 s~~~a~~a~~lfE~agl~G~LL~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyGP 363 (448) T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN--GSYLLDAILLFIIGFLIYGP 363 (448) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHH T ss_conf 7777889999999976278899999887650466464999999999999998762877--55999999999999998359 Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHH Q ss_conf 99999999985346-6769999999999999-9999999999998311799-9999999999999999999422000 Q gi|254780967|r 319 INSNFSSISMEPFS-HLAGTASSIFGFINTV-ISTILGIIIGQSFNGTTYP-ITIGFFGIAVSSFICILIVEKNQMF 392 (398) Q Consensus 319 ~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (398) T Consensus 364 q-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448) T COG2271 364 Q-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448) T ss_pred H-HHHHHHHHCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH T ss_conf 9-999999842651743010202033488877488607763046753687515999999999999999999851510 |
|
| >pfam00083 Sugar_tr Sugar (and other) transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=227.61 Aligned_cols=366 Identities=19% Similarity=0.195 Sum_probs=226.7 Q ss_pred HHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC--C Q ss_conf 999999999819---------99889999999999999999999999998650828999999999999999851001--1 Q gi|254780967|r 22 LPCLPKISDSLH---------LSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN--S 90 (398) Q Consensus 22 ~p~lp~i~~~l~---------~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~--~ 90 (398) T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i~s~~~iG~~iG~~~~G~l~Dr~GRk~~l~~~~~~~~i~~~l~~~a~~~~ 100 (449) T pfam00083 22 FLTLIKFFKRFGALTSIGACAASTVLSG-LIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKS 100 (449) T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH T ss_conf 9974999997398777777788798999-999999999999999999998740779999999999999999999867573 Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHH Q ss_conf 0111002232100111111100012332100011112212233100011111111112222--11111101456788888 Q gi|254780967|r 91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV--ALSGGWIGIFVCMGVIT 168 (398) Q Consensus 91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~--~~~~gWr~~f~~~~~~~ 168 (398) T Consensus 101 ~~~l~i~R~l~G~~~G~~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~i~~~~~ 180 (449) T pfam00083 101 FYMLIVGRVIVGLGVGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPA 180 (449) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH T ss_conf 99999999999999999999999999986887344687898878888999999999999951488643000111421648 Q ss_pred HHHHHHHHHHCCCCCCH-------HHHC-----------------------CCCCCCCCCCCCCCCCCCHHHHHHHHH-- Q ss_conf 77778887616788640-------2210-----------------------111111233310000000002567778-- Q gi|254780967|r 169 TFITLWYYIRFPETLDP-------RDVR-----------------------PLNLYAILHSFSLIFKHRASTLYNIAN-- 216 (398) Q Consensus 169 ~~~~~~~~~~~pet~~~-------~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 216 (398) T Consensus 181 ~l~~~-~~~~lpESPr~l~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (449) T pfam00083 181 ILLLI-GLLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERSVEAEKASWLELFRGKTVRQRLLMGVM 259 (449) T ss_pred HHHHH-HHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHH T ss_conf 76421-01378998689998485999999999982888542889999999999875302106888627205799999999 Q ss_pred --H-HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf --8-7631001468887654554315311015889988657677889999985001565124688778889999999987 Q gi|254780967|r 217 --S-LTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ 293 (398) Q Consensus 217 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398) T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~~~l~d~~GRr~~~~~~~~~~~i~~~~~~~~~ 337 (449) T pfam00083 260 LQIFQQLTGINAIFYYSPTIFETL-GLSDS-LLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFLVLGVAL 337 (449) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999987675779998789999984-99768-9999999999999998788875460869999999999999999999999 Q ss_pred HCC-CCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 325-77764037998998999999999-9999999985346-67699999999999999999999999998311799999 Q gi|254780967|r 294 ITS-NHPIHLLIFIAFFFLASFQFGLI-NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITI 370 (398) Q Consensus 294 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 370 (398) T Consensus 338 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~lg~~v~~~~~~~l~~~~~~~~~~ 417 (449) T pfam00083 338 LGVAKSKGAGIVAIVFILLFIAFFALGWGPVPWVIVSELFPLGVRPKAMAIATAANWLANFLIGFLFPIITGAIGGYVFL 417 (449) T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 85346612699999999999999997788999999786375869999999999999999999999999999987298999 Q ss_pred HHHHHHHHHHH-HHHHHHCCHH Q ss_conf 99999999999-9999942200 Q gi|254780967|r 371 GFFGIAVSSFI-CILIVEKNQM 391 (398) Q Consensus 371 ~~~~~~~~~~~-~~~~~~~~~~ 391 (398) T Consensus 418 i~~~~~~~~~i~~~~~~PETkg 439 (449) T pfam00083 418 VFAGLLVLFILFVFFFVPETKG 439 (449) T ss_pred HHHHHHHHHHHHHHEEEECCCC T ss_conf 9999999999997505423999 |
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=216.15 Aligned_cols=374 Identities=14% Similarity=0.115 Sum_probs=230.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99988657669999999999819998-89999-99999999999---999999999865082899999999999999985 Q gi|254780967|r 11 MAINSLGIDIILPCLPKISDSLHLSN-ENYGQ-HLISFYLIGYG---IAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 11 ~~~~~~~~~~~~p~lp~i~~~l~~s~-~~~~~-~~~s~~~~~~~---i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 25 ~~lEwyDF~iYg~~A~~i~~~FFP~~~~~~~ll~tfa~favgf~~RPlGgivfG~lgDr~GRk~~L~~ti~lM~~~T~li 104 (490) T PRK10642 25 NAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI 104 (490) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 89999999999999999998619999946999999999999999885799999999985210999999999999999999 Q ss_pred HCCCCHH--------HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC---CC-- Q ss_conf 1001101--------1100223210011111110001233210001111221223310001111111111222---21-- Q gi|254780967|r 86 VTINSFT--------GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT---VA-- 152 (398) Q Consensus 86 ~~a~~~~--------~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l---~~-- 152 (398) T Consensus 105 gllPtY~~IGi~ApilLvllRllQG~s~GGE~~ga~~~l~E~aP~~~RG~~~s~~~~g~~~G~llaa~~~~~l~~~l~~~ 184 (490) T PRK10642 105 GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA 184 (490) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH T ss_conf 87477998899999999999999888631427689999998589765020123898889999999999999999866987 Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC----CCCC----CCCCCCCCCCCCCC-HHHHHHH-HHHHHH Q ss_conf --1111101456788888777788876167886402210----1111----11233310000000-0025677-788763 Q gi|254780967|r 153 --LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVR----PLNL----YAILHSFSLIFKHR-ASTLYNI-ANSLTM 220 (398) Q Consensus 153 --~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~----~~~~----~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ 220 (398) T Consensus 185 ~~~~wGWRIPFlig~~l~-ligl~iR~~l~ESP~F~~~~e~~~~~~~~~~~~~~~~pl~e~~~~~~r~ll~~~gl~~~~~ 263 (490) T PRK10642 185 NFLDWGWRIPFFIALPLG-IIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATN 263 (490) T ss_pred HHHCCCHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 762655299999999999-9999999808998768988877642100001346544499999984799999999999999 Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 1001468887654554315311015889-988657677889999985001565124688778889999999987325777 Q gi|254780967|r 221 GAILGFVNSSQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP 299 (398) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (398) T Consensus 264 ~~~Y~~~~y~ptyl~~~l~~s~~~~~~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll--~~~- 340 (490) T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--NSN- 340 (490) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH--HCC- T ss_conf 99999999999999980299877899999999999999999999999882648999999999999999999998--479- Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH Q ss_conf 640379989989999999999999999985346-676999999999999999999999999983117--99999999999 Q gi|254780967|r 300 IHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT--YPITIGFFGIA 376 (398) Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ 376 (398) T Consensus 341 -~~~~i~~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~gG~tP~I~t~Li~~Tg~~~~pa~Yl~~~a 419 (490) T PRK10642 341 -VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAAWLVESSQNLMMPAYYLMVVA 419 (490) T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH T ss_conf -6999999999999999999889999999868870677988799999999998999999999998799708999999999 Q ss_pred HHHHHHHHHHHCC Q ss_conf 9999999999422 Q gi|254780967|r 377 VSSFICILIVEKN 389 (398) Q Consensus 377 ~~~~~~~~~~~~~ 389 (398) T Consensus 420 ~i~lia~~~~~ET 432 (490) T PRK10642 420 VIGLITGVTMKET 432 (490) T ss_pred HHHHHHHHHCCCC T ss_conf 9999999956424 |
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=212.00 Aligned_cols=377 Identities=15% Similarity=0.121 Sum_probs=224.8 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHH-CCCHHHHHH-HHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 999886576699999999-9981-999889999-999999999---9999999999986508289999999999999998 Q gi|254780967|r 11 MAINSLGIDIILPCLPKI-SDSL-HLSNENYGQ-HLISFYLIG---YGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 11 ~~~~~~~~~~~~p~lp~i-~~~l-~~s~~~~~~-~~~s~~~~~---~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 31 ~~lE~yDf~iy~~~a~~i~~~~FFp~~~~~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~si~~m~~~T~l 110 (438) T PRK09952 31 AVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATAL 110 (438) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 89999999999999999978724999990799999999999999987589999999997303399999999999999999 Q ss_pred HHCCCCHHH--------HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC---C- Q ss_conf 510011011--------1002232100111111100012332100011112212233100011111111112222---1- Q gi|254780967|r 85 MVTINSFTG--------MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV---A- 152 (398) Q Consensus 85 ~~~a~~~~~--------l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~---~- 152 (398) T Consensus 111 ig~lPty~~IGi~ApilLv~~R~lQGl~~GGE~~~a~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~~~~l~~~l~~ 190 (438) T PRK09952 111 IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTD 190 (438) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCH T ss_conf 99747689888899999999999978887612889999999968877732440499998899999999999999983688 Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC-CCCCCCCCCCCC-CCHHHHHHHHHH-HHHHCCHHH Q ss_conf ---11111014567888887777888761678864022101111-112333100000-000025677788-763100146 Q gi|254780967|r 153 ---LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNL-YAILHSFSLIFK-HRASTLYNIANS-LTMGAILGF 226 (398) Q Consensus 153 ---~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 226 (398) T Consensus 191 ~~~~~wGWRipFlig~l~~-li~l~iR~~l~Esp~f~~~~~~~~~~~~~~p~~e~~~~~~~~~l~~~~l~~~~~~~~y~~ 269 (438) T PRK09952 191 EQFLSWGWRIPFLFSIVLV-LIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIV 269 (438) T ss_pred HHHHHCCHHHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8885314299999999999-999999982788878999876233443346699999986599999999999999999999 Q ss_pred HHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH Q ss_conf 8887654554315311015889-988657677889999985001565124688778889999999987325777640379 Q gi|254780967|r 227 VNSSQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIF 305 (398) Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (398) T Consensus 270 ~~~~~~y~~~~l~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~-~~l~~~-~-~~~~~ 346 (438) T PRK09952 270 TAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF-MALEAQ-S-IFWIV 346 (438) T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHCC-C-HHHHH T ss_conf 99999999987288899999999999999999999999999983634999999999999999999-998438-6-89999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH Q ss_conf 989989999999999999999985346-676999999999999-99999999999998311---7999999999999999 Q gi|254780967|r 306 IAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINT-VISTILGIIIGQSFNGT---TYPITIGFFGIAVSSF 380 (398) Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~-~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~ 380 (398) T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L~~~~~~~~~~~a~y~~~~~~i~l 426 (438) T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH T ss_conf 99999999999999889999999868860557689999999999999999999999999768994799999999999999 Q ss_pred HHHHHHHCCHH Q ss_conf 99999942200 Q gi|254780967|r 381 ICILIVEKNQM 391 (398) Q Consensus 381 ~~~~~~~~~~~ 391 (398) T Consensus 427 ~~~l~~r~~~~ 437 (438) T PRK09952 427 MTALLMKDNQR 437 (438) T ss_pred HHHHHCCCCCC T ss_conf 99998055579 |
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=212.70 Aligned_cols=373 Identities=13% Similarity=0.144 Sum_probs=219.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH--HHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99988657669999999999819998899999--999999999---9999999999865082899999999999999985 Q gi|254780967|r 11 MAINSLGIDIILPCLPKISDSLHLSNENYGQH--LISFYLIGY---GIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 11 ~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~--~~s~~~~~~---~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 31 ~~~E~yDf~iy~~~a~~i~~~FFp~~~~~~~ll~t~~~fa~gf~~RPlG~iifG~igDr~GRk~~l~~si~lm~i~T~li 110 (432) T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH T ss_conf 79999999999999999999608999936999999999999999886699999998873010999999999999999999 Q ss_pred HCCCCHHH--------HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC---CC-- Q ss_conf 10011011--------100223210011111110001233210001111221223310001111111111222---21-- Q gi|254780967|r 86 VTINSFTG--------MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT---VA-- 152 (398) Q Consensus 86 ~~a~~~~~--------l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l---~~-- 152 (398) T Consensus 111 g~lPty~~IGi~ApilLvl~RllQG~~~GGE~~ga~~~l~E~ap~~rRG~~~s~~~~g~~~G~lla~~v~~~l~~~l~~~ 190 (432) T PRK10406 111 ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA 190 (432) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 94885888788999999999999998615758999999998477777135530999999999999999999997406822 Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHCCHHHHHH Q ss_conf --111110145678888877778887616788640221011111123331000000000256777-88763100146888 Q gi|254780967|r 153 --LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIA-NSLTMGAILGFVNS 229 (398) Q Consensus 153 --~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 229 (398) T Consensus 191 ~~~~wGWRipFlig~i~~l-i~l~lR~~l~Es~~~~~~~~~-~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~y~~~~~ 265 (432) T PRK10406 191 ELREWGWRIPFALGAVLAV-VALWLRRQLDETSQQETRALK-E---AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTY 265 (432) T ss_pred CCCCCHHHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHCCC-C---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 2225109999999999999-999999727778267863045-5---5537999873599999999999999999999999 Q ss_pred HHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH Q ss_conf 765455431531101-5889988657677889999985001565124688778889999999987325777640379989 Q gi|254780967|r 230 SQQIYVGIYQLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF 308 (398) Q Consensus 230 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (398) T Consensus 266 ~~t~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~G~LsDriGRr~~~~~~~~~~~~~~~p~-~~~l~~~~-~~~-~~~~l 342 (432) T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLFGALSDKIGRRTSMLCFGSLATIFTVPI-LSALQNVS-SPY-AAFGL 342 (432) T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHCCC-HHH-HHHHH T ss_conf 9999987559988999999999999999999999999988473299999999999999999-99997387-599-99999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH Q ss_conf 989999999999999999985346-676999999999999-999999999999983117--9999999999999999999 Q gi|254780967|r 309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINT-VISTILGIIIGQSFNGTT--YPITIGFFGIAVSSFICIL 384 (398) Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~-~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~ 384 (398) T Consensus 343 ~~~~~~~~~~~~~~~~~~~aElFPt~vR~tG~g~~Yni~~~l~GG~-aP~Ia~~L~~~g~~~~~~~Y~~~~a~i~~i~~l 421 (432) T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGS-AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH T ss_conf 9999999999878999999986886055558879999999999999-999999999849973899999999999999999 Q ss_pred HHHCCHHH Q ss_conf 99422000 Q gi|254780967|r 385 IVEKNQMF 392 (398) Q Consensus 385 ~~~~~~~~ 392 (398) T Consensus 422 ~l~r~~kg 429 (432) T PRK10406 422 MLHRKGKG 429 (432) T ss_pred HHEECCCC T ss_conf 84005699 |
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=210.91 Aligned_cols=362 Identities=11% Similarity=0.124 Sum_probs=256.0 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC Q ss_conf 65766999999999981999889999999999999999999999998650828999999999999999851001101110 Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML 95 (398) Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~ 95 (398) T Consensus 23 ~~itsv~Pll~~I~~dl~ls~~~~G-lLttlP~l~fgl~s~~a~~larR~G~~r~l~~al~ll~~G~~lR~~~~~~~~ll 101 (393) T PRK09705 23 PLLTSVGPLLPQLRQASGMSFSVAA-LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLL 101 (393) T ss_pred HHHHCCHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH T ss_conf 4541305219999988199888999-999999999999988789999986808899999999999999998434389999 Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 02232100111111100012332100011112212233100011111111112222111111014567888887777888 Q gi|254780967|r 96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWY 175 (398) Q Consensus 96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~ 175 (398) T Consensus 102 ~gt~l~G~GIai~nvllP~~vk~~fP-~r~g~~tglY~~~m~~ga~l~~~l~~~l~~~~~~Wr~al~~wai~allal~~w 180 (393) T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAW 180 (393) T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999998998864410999997723-20589999999999999999999999999872778999999999999999999 Q ss_pred HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH Q ss_conf 76167886402210111111233310000000002567778876310014688876545543153110158899886576 Q gi|254780967|r 176 YIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAM 255 (398) Q Consensus 176 ~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (398) T Consensus 181 ~~~~~~~~~~~~~-------~~~~~~~~~rs~~aW~l~~ffglqS~~~Y~~~aWLP~il~~~G~s~~~AG~lls~~~~~~ 253 (393) T PRK09705 181 WWQSAREVASSHK-------TTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQ 253 (393) T ss_pred HHHHCCCCCCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH T ss_conf 9971578777888-------887764411380799999999999999999999999999986999999999999999999 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH Q ss_conf 77889999985001565124688778889999999987325777640379989989999999999999999985--3466 Q gi|254780967|r 256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME--PFSH 333 (398) Q Consensus 256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 333 (398) T Consensus 254 ~~~~l~~P~la~~~~~~~~l~~~~~~~~i--g~~gl~~~-p~---~~~~--~~~~l~Gig~G~~F~lal~l~~~rt~~~~ 325 (393) T PRK09705 254 AAGALLMPAMARHQDRRKLLMLALVLQLV--GFCGFIWL-PL---QLPV--LWAMVCGLGLGGAFPLCLLLALDHSVQPA 325 (393) T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HHHHHHHH-HH---HHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCHH T ss_conf 99999999997346740499999999999--99999998-87---7999--99999999877899999999987369988 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHH Q ss_conf 76999999999999999999999999983117-99999999999999999999942200034 Q gi|254780967|r 334 LAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIGFFGIAVSSFICILIVEKNQMFRK 394 (398) Q Consensus 334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 394 (398) T Consensus 326 ~a~~LSg~~Q~vGYllAalgP~~~G~l~d~tg~w~~~~~~l~~~~l~~~v~~~~~~p~~~~~ 387 (393) T PRK09705 326 IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH T ss_conf 99999999999989999999999999999829958999999999999999997359400389 |
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=204.07 Aligned_cols=379 Identities=14% Similarity=0.120 Sum_probs=259.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-- Q ss_conf 999998865766999999999981999889999999999999999999999998650828999999999999999851-- Q gi|254780967|r 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV-- 86 (398) Q Consensus 9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~-- 86 (398) T Consensus 24 ~~~~~S~lG~~~~~iAl~~~v~~~TgS~~~~g-lv~~~~~lp~ll~~~~~GvlaDR~~Rr~vmi~~~~~~~~~~~~l~~~ 102 (416) T PRK10489 24 LARFISIVSLGLLGVAVPVQIQMMTHSTWQVG-LSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN 102 (416) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999998859999999-99999999999999999999994484299999999999999999999 Q ss_pred ---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH Q ss_conf ---00110111002232100111111100012332100011112212233100011111111112222111111014567 Q gi|254780967|r 87 ---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163 (398) Q Consensus 87 ---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~ 163 (398) T Consensus 103 ~~~~~~~~~~l~~~~~l~g~~~a~~~pA~~a~lp~lV~~~~L~~Anal~~~~~~~~~iiGP~lgG~li~-~~g~~~~~~i 181 (416) T PRK10489 103 ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLA-TGGVAWNYGL 181 (416) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHH T ss_conf 981734099999999999999888889999999984478989999999999999998986488999998-7133499999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC Q ss_conf 88888777788876167886402210111111233310000000002567778876310014688876545543153110 Q gi|254780967|r 164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL 243 (398) Q Consensus 164 ~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (398) T Consensus 182 ~a~~~~~s~~-~l~~l~~~~~~~~~~~~~~~~~~eG~r~l~~~~~l~~~~l~~~~~~-~~~~~~~l~p~~~~~l~~~~~~ 259 (416) T PRK10489 182 AAAGTFITLL-PLLRLPALPPPPQPREHPLRSLLAGFRFLLASPLVGGIALLGGLLT-MASAVRVLYPALADNWQMSAAQ 259 (416) T ss_pred HHHHHHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHH T ss_conf 9999999999-9971877899988887547899999999981779999999999999-9999999999999980898789 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 15889988657677889999985001565124688778889999999987325777640379989989999999999999 Q gi|254780967|r 244 FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF 323 (398) Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398) T Consensus 260 ~G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~G~~~~~~~v~~ 332 (416) T PRK10489 260 IGLLYAAIPLGAAIGALTSGWLAHSRRPGLLMLLSTLGSFL---AIGLFG----LMPMWILGVACLALFGWLSAISSLLQ 332 (416) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH---HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999852456638999999999999---999998----61599999999999999999999999 Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC Q ss_conf 9999853-4667699999999999999999999999998311799--9999999999999999999422000343069 Q gi|254780967|r 324 SSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYP--ITIGFFGIAVSSFICILIVEKNQMFRKTELR 398 (398) Q Consensus 324 ~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~r 398 (398) T Consensus 333 ~t~iQ~~~P~~~rGRV~s~~~~~~~~~~plG~~~~G~la~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~ 410 (416) T PRK10489 333 YTLLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLAIIGVLLLLVLGELRRFRQTPPQ 410 (416) T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC T ss_conf 999998599998759999999999998998999999999997789999999999999999999977142037899989 |
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=210.72 Aligned_cols=375 Identities=17% Similarity=0.220 Sum_probs=261.8 Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999988657-6699999999998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 7 IAMLMAINSLGI-DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 7 l~~~~~~~~~~~-~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~-ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~ 96 (417) T COG2223 18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKG-LLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGL 96 (417) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999988654121488988899-99999998747899877753401284379999999999999999 Q ss_pred HCCCCHH---HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC---CCH Q ss_conf 1001101---1100223210011111110001233210001111221223310001111111111222211111---101 Q gi|254780967|r 86 VTINSFT---GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG---WIG 159 (398) Q Consensus 86 ~~a~~~~---~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g---Wr~ 159 (398) T Consensus 97 ~~a~~~~~~~~ll~~gll~G~~GasFa-v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~-v~~~~g~~~w~~ 173 (417) T COG2223 97 AFAVTYPSTWQLLVIGLLLGLAGASFA-VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL-VAVAFGFLAWRN 173 (417) T ss_pred HHHCCCCCHHHHHHHHHHHHCCCCEEH-CCCCCCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHH-HHHHHHHHHHHH T ss_conf 997128756899999999701663000-02544211188544418988760-553019999998899-999972589999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC Q ss_conf 45678888877778887616788640221011111123-33100000000025677788763100146888765455431 Q gi|254780967|r 160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAIL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY 238 (398) Q Consensus 160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (398) T Consensus 174 ~~~i~~~~l~v~~v~~~~~~~d~p~~r~----~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f 249 (417) T COG2223 174 VAGIYVVALAIAAVLAWLGMNDVPEHRA----SVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF 249 (417) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHC----CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999999999999998476866523----555320057788863820699999999999999999999999999864 Q ss_pred CCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 531101-5889988657677889999985001565124688778889999999987325777640379989989999999 Q gi|254780967|r 239 QLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFG 317 (398) Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (398) T Consensus 250 g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G 329 (417) T COG2223 250 GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG 329 (417) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC T ss_conf 98723188999987889999985044443313534479999999999999997056344667643999999999999915 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCH Q ss_conf 999999999985346676999999999999999999999999983117999999999---9999999999994220 Q gi|254780967|r 318 LINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFG---IAVSSFICILIVEKNQ 390 (398) Q Consensus 318 ~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 390 (398) T Consensus 330 ~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~-~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417) T COG2223 330 LGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS-YTGAFMLLLAFYLVALVLTWALYARR 404 (417) T ss_pred CCCCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 6763003313187786646788799885425665404899999984263-79999999999999999999999711 |
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=203.98 Aligned_cols=362 Identities=15% Similarity=0.130 Sum_probs=232.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999886576699999999998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 10 ~L~~~~~l~~l~~Gl~~pll~l~l~~~G~s~~~iG-l~~s~~~~G~llg~~~~~~li~r~G~~r~~~~~~~l~a~~~l~~ 88 (381) T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVG-MVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASLIFAAGCVGL 88 (381) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999888999999998699878999-99999999999999877999998188999999999999999999 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111101456788 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG 165 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~ 165 (398) T Consensus 89 ~l~~~~~~W~~lR~l~G~~~a~~~v~~EsWln~~a~~~~RGrv~~iY~~~~~~g~~~Gp~ll~~-~~~--~~~~~f~~~~ 165 (381) T PRK03633 89 GLMVGFWSWLGWRFLAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK-VST--ELMSVLPWVT 165 (381) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCC--CHHHHHHHHH T ss_conf 9881299999999999999999999999998544973335899999999999999999999841-670--0678999999 Q ss_pred HHHHHHHHHHHH-HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC Q ss_conf 888777788876-16788640221011111123331000000000---25677788763100146888765455431531 Q gi|254780967|r 166 VITTFITLWYYI-RFPETLDPRDVRPLNLYAILHSFSLIFKHRAS---TLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241 (398) Q Consensus 166 ~~~~~~~~~~~~-~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398) T Consensus 166 ~l~~~alipi~~~~~~~p-~~~~~~~~-------~~~~l~~~~~ap~~~~~~~~~G~~~~~---~~sl~Pvy~~~~Gls~ 234 (381) T PRK03633 166 GLVLAGILPLLFTRVLNQ-QAENHDST-------SIWPMLKLRQARLGVNGCIISGIVLGS---LYGLMPLYLNHQGMSN 234 (381) T ss_pred HHHHHHHHHHHHCCCCCC-CCCCCCCC-------CHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCH T ss_conf 999999999996378899-98887777-------789898850258999999999999999---9988899999849988 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 10158899886576778899999850015651246887788899999999873257776403799899899999999999 Q gi|254780967|r 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS 321 (398) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398) T Consensus 235 ~~ia~~~~~~~~Gg~l~Q~PiG~LSDr~dRr~vl~~~~~~~~~~~--~~~~~---~----~~~~~-~lf~~G~~~~~lY~ 304 (381) T PRK03633 235 ASIGFWMAVLVSAGILGQWPMGRLADRFGRLLVLRVQVFVVILGS--IAMLS---Q----AAMAP-ALFILGAAGFTLYP 304 (381) T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH--HHHHH---H----HHHHH-HHHHHHHHHHHHHH T ss_conf 899999999999999998245999887372999999999999999--99998---8----99999-99999999854799 Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH Q ss_conf 9999998534-667699999999999999999999999998311799999999999999999999942200034 Q gi|254780967|r 322 NFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394 (398) Q Consensus 322 ~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 394 (398) T Consensus 305 l~lA~~~d~~~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~~~G~~--~lf~~~a~~~l~~~~~~~r~~~~~p 376 (381) T PRK03633 305 VAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDN--LLFIMIASVSFIYLLMLLRNAGHTP 376 (381) T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 99999866277888999999999999819887289999999985812--8999999999999999999726899 |
|
| >TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=202.51 Aligned_cols=364 Identities=16% Similarity=0.133 Sum_probs=245.6 Q ss_pred HHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC Q ss_conf 99999998199988--9999999999999999999999998650828999999999999999851001101110022321 Q gi|254780967|r 24 CLPKISDSLHLSNE--NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ 101 (398) Q Consensus 24 ~lp~i~~~l~~s~~--~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~ 101 (398) T Consensus 124 ~~stiv~EW~LvC~~~~~~~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a~SP~~~~~~vfR~L~ 203 (557) T TIGR00898 124 FSSTIVTEWDLVCEDAWKVDLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 203 (557) T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 48735885274300257766889999999998688887786352048999999999988786512756899999999996 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 001111111000123321000111122122-3310001111111111222211111101456788888777788876167 Q gi|254780967|r 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSI-AMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFP 180 (398) Q Consensus 102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~-~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~p 180 (398) T Consensus 204 G~~~~g~~~~~~~L~~E~~~~~~R~~~~~lG~~~~~~~G~~~L~l~A-Y~~~~S-gWR~L~l~~s~P~~~~~~~~rw~vp 281 (557) T TIGR00898 204 GMGIAGIWVVAVVLNTEFLPKKQRAIVGILGIQVFFSLGLLLLPLVA-YFIPDS-GWRWLQLAVSLPLFIFLLLSRWFVP 281 (557) T ss_pred HHHHCCEEEEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHH-HHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 13100202577776775327366157661035888887699987788-653785-5899999999889999999877710 Q ss_pred CCCCH-------------------HH-------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC Q ss_conf 88640-------------------22-------------------10111111233310000000002567778876310 Q gi|254780967|r 181 ETLDP-------------------RD-------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGA 222 (398) Q Consensus 181 et~~~-------------------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (398) T Consensus 282 ESpRWL~~~gr~~~A~~~L~~~A~~Ng~~~eg~~~~~~~~~~~~~~~~~~~k~~~~~~~~L~rtp~lr~~tl~l~~~Wf~ 361 (557) T TIGR00898 282 ESPRWLISQGRIEEALKILQRVAKINGKKEEGGKLPAEVLSLSLEKELSSKKAQKPSFLDLFRTPQLRKTTLILMMLWFT 361 (557) T ss_pred CCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 13125642485789999999985337861553326603330025666542200143215540687899999999999999 Q ss_pred -CHHHHHHHHHHHHHHCCCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH Q ss_conf -0146888765455431531----------------------10158899886576778899999850015651246887 Q gi|254780967|r 223 -ILGFVNSSQQIYVGIYQLG----------------------NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSL 279 (398) Q Consensus 223 -~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 279 (398) T Consensus 362 ~~f~YyGL--~l~~~~l~~n~D~C~~~~~~~~~~~~~C~~L~~~~Y~~~~~~glve~Pa~~~~~l~i~~LgRr~~~a~~~ 439 (557) T TIGR00898 362 TAFSYYGL--VLDLENLGGNGDVCSISLFKKAVEAKVCEYLSKEIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASL 439 (557) T ss_pred HHHHHHHH--HHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH T ss_conf 88999877--7532114787440023100044100222110089999999999988899998898876217767999999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 788899999999873257776403799899899999999999999999853466-7699999999999999999999999 Q gi|254780967|r 280 LIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIG 358 (398) Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g 358 (398) T Consensus 440 ~~ag~~~l~~~~~~~~~~~-~~G~l~t~L~~~g~~~~~~aF~~~ylyt~ELYPT~~Rn~G~g~~S~m~r~G~i~-~P~~~ 517 (557) T TIGR00898 440 LLAGVALLLLLFVPEELYF-YNGWLRTALAVLGKAGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPFLV 517 (557) T ss_pred HHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHH T ss_conf 9999999999986312355-306999999999999888872542220565015899999999999999875799-99999 Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH Q ss_conf 9-9831179999999999999999999994220003 Q gi|254780967|r 359 Q-SFNGTTYPITIGFFGIAVSSFICILIVEKNQMFR 393 (398) Q Consensus 359 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 393 (398) T Consensus 518 ~~~~~~~~~lP~~~fG~~~~l~~~~~l~LPEt~g~~ 553 (557) T TIGR00898 518 YRLGEVWLFLPLVIFGVLALLAGILTLLLPETKGVP 553 (557) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 998554454589999999999999988521016888 |
The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane. |
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=199.43 Aligned_cols=354 Identities=15% Similarity=0.193 Sum_probs=253.8 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--CCHHH-HCCCCCCC Q ss_conf 9999998199988999999999999999999999999865082899999999999999985100--11011-10022321 Q gi|254780967|r 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI--NSFTG-MLCMRLIQ 101 (398) Q Consensus 25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a--~~~~~-l~~~r~l~ 101 (398) T Consensus 80 ipy~~~~f~Ws~~~QG-~ilSS~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~~~~v~~~liP~aA~~g~~~G~~~~Rv~q 158 (514) T TIGR00894 80 IPYKNPEFNWSEDQQG-LILSSFFYGSVIIQIPVGYLAGKYGTKKVIGFALLLSSVLSFLIPIAAGVGFAWGVIVLRVLQ 158 (514) T ss_pred CCCCCCCCCCCHHHHH-HHHHHHHHHEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH T ss_conf 6668888478677636-887566661252341603563140437999999999999998746554121011023453212 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHH Q ss_conf 00111111100012332100011112212233100011111111112222111-----1110145678888877778887 Q gi|254780967|r 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-----GGWIGIFVCMGVITTFITLWYY 176 (398) Q Consensus 102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-----~gWr~~f~~~~~~~~~~~~~~~ 176 (398) T Consensus 159 G~~~G~~~p~~h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGivG~~~~~~W~ 238 (514) T TIGR00894 159 GIGQGLVSPAQHELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGIVGTAVSIAWF 238 (514) T ss_pred HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 01233114643022663058875057999986268898999986304555356740147761467788999999999989 Q ss_pred HHC---CCCCCHHHH--------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC Q ss_conf 616---788640221--------------011111123331000000000256777887631001468887654554315 Q gi|254780967|r 177 IRF---PETLDPRDV--------------RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ 239 (398) Q Consensus 177 ~~~---pet~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398) T Consensus 239 ~l~~D~P~~HP~is~~Ek~YI~~sL~~~~~~krn~r~~~P~KAi~kS~P~W~~~~a~~~~~w~~~~l~~~~P~f~~~~L~ 318 (514) T TIGR00894 239 VLVYDDPSDHPCISESEKKYINSSLVQQVSSKRNSRQSLPIKAILKSLPVWAIVFASFGHIWGLNTLMTYLPTFISSVLH 318 (514) T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 87313754574233578999988777520122257898844565654599999999875330789999977799988734 Q ss_pred CC-CCHHHHHHHHHHHHHH----HHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH Q ss_conf 31-1015889988657677----8899999850015-----651246887788899999999873257776403799899 Q gi|254780967|r 240 LG-NLFPIAFAVGGFAMSI----ASFINSRLVEKFG-----IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF 309 (398) Q Consensus 240 ~~-~~~~~~~~~~~~~~~~----~~~~~~~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (398) T Consensus 319 ~~~~~nGlLSsLPyL~~~l~~~~~~~~AD~l~~~~~ls~t~~RKl~t---~ig~~~~~~~~~al~Y~snl~~~~~~i~~L 395 (514) T TIGR00894 319 VNIRENGLLSSLPYLLAWLCGVLASQLADYLLSRKILSLTAVRKLFT---FIGLLGPGIFVVALPYLSNLYNAYSTIIIL 395 (514) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 65312540436799999999999998758987146502677889999---999888999999999886898999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHH Q ss_conf 8999999999999999998534667699999999999999999999999998311-7---99999999999999999 Q gi|254780967|r 310 FLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-T---YPITIGFFGIAVSSFIC 382 (398) Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~~~~ 382 (398) T Consensus 396 ~lA~~~~g~~~~G~lin~lDLaP~y~Gf~~g~~~~~g~~~Gl~~~~~~G~~l~~~~~pv~~~W~~vF~l~a~~~~~~ 472 (514) T TIGR00894 396 TLANALAGFVLSGVLINALDLAPRYAGFIKGVTTLIGSLGGLISSTLAGQLLSQDSKPVISAWKKVFLLMAFVNVIS 472 (514) T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 99876300100007888876225789999999999987887899999998624889404777799999999999987 |
The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane. |
| >pfam05977 DUF894 Bacterial protein of unknown function (DUF894) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=187.95 Aligned_cols=375 Identities=13% Similarity=0.049 Sum_probs=267.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC- Q ss_conf 9999988657669999999999819998899999999999999999999999986508289999999999999998510- Q gi|254780967|r 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT- 87 (398) Q Consensus 9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~- 87 (398) T Consensus 17 ~a~lvS~~Gtwmq~VA~~Wlv~~lT~S~~~vg-lV~~a~~LP~~ll~l~aGvlADr~dRRr~ll~~q~~~~~~a~~La~l 95 (524) T pfam05977 17 IASLVSNLGWLMQTVAASWLMTDISASPLMVA-LVQAAATLPIFLLSIPAGAIADNFDRRKVMLAGQLLMAIASALLTVL 95 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999876508999999-99999998899999999999982250899999999999999999999 Q ss_pred ----CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH Q ss_conf ----0110111002232100111111100012332100011112212233100011111111112222111111014567 Q gi|254780967|r 88 ----INSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163 (398) Q Consensus 88 ----a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~ 163 (398) T Consensus 96 ~~~g~~~~~~Ll~l~f~~G~~~A~~~PA~qA~vp~lVpr~~L~~AvALns~~~N~aR~iGPAlgG~Lia~-~G~~~~F~l 174 (524) T pfam05977 96 AALGLLSPWLLLAFTFLIGIGTALNDPAWQASVGDLVPRRDVPAAVALNSVGYNLARSVGPALGGLLVAA-FGAATAFAV 174 (524) T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 9859874999999999999999998789999999857997889899998589988999888999999997-726999999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-C Q ss_conf 888887777888761678864022101111112333100000000025677788763100146888765455431531-1 Q gi|254780967|r 164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-N 242 (398) Q Consensus 164 ~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 242 (398) T Consensus 175 nAlSyl~~i~~L~~~~~~~~~~~~p~e~~~~a~~~Glryv~~sp~lr~vl~~~~~~~~~~~~~~aLLPl~Ar~~l~gga~ 254 (524) T pfam05977 175 NALSYFAVIVAIARWKRDVPPSPLPRENLFGALRAGLRYTAMSREIRSVLVRAAAFGLSASAVWALLPLVARDLLGGDAG 254 (524) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH T ss_conf 99999999999994787788988888776889999999997096699999999999999999999999999998379814 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 01588998865767788999998500156512468877888999999998732577764037998998999999999999 Q gi|254780967|r 243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN 322 (398) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (398) T Consensus 255 ~yGlLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~-------~~~~~l~~~~l~~~G~awi~~lst 327 (524) T pfam05977 255 FYGILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLAL-------SPSLWVAAIALLLGGACWITALST 327 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7899999999889999998898750157243899999999999999996-------518999999999998999999999 Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH Q ss_conf 9999985346-67699999999999999999999999998311799999999999999999999942200034 Q gi|254780967|r 323 FSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394 (398) Q Consensus 323 ~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 394 (398) T Consensus 328 ~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG~vA~~~g~~~aL~--~aa~~l~~~~~~~~~~~l~~~ 398 (524) T pfam05977 328 LNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWGTVAEALGLTGALL--LAAAALLAGAALGLRLRLPEG 398 (524) T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHCCCCCCC T ss_conf 98999970879999999999999998567888999999873007499999--999999999998712027886 |
This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins. |
| >pfam03825 Nuc_H_symport Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-26 Score=162.49 Aligned_cols=378 Identities=11% Similarity=0.094 Sum_probs=242.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH Q ss_conf 99999999988657669999999999819998899999999999999999999999986508-28999999999999999 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-RKIVMMFGLVIHIISTF 83 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~~ 83 (398) T Consensus 5 ~RLs~~yFl~F~~~G~~~P~~~~yL~~~Gfs~~qIG-~i~a~~~i~~iv~p~~wG~lADr~~~~~~vl~~~~~~~~~~~~ 83 (400) T pfam03825 5 FRLKVMMFLQLFIWGAWLVTLGSYMGMTGFAGAQIG-LVYSSWGIAAIVMPFLSGIIADRWFSAERVLAVCHLIGAVALF 83 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 569999999999999999999999860798999999-9999999999999999999983456478999999999999999 Q ss_pred HHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC---CCHH Q ss_conf 8510011011100223210011111110001233210001111221223310001111111111222211111---1014 Q gi|254780967|r 84 IMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG---WIGI 160 (398) Q Consensus 84 ~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g---Wr~~ 160 (398) T Consensus 84 ~~~~~~~f~~~~~~~~~~~~~~~p~lpL~dsi~~~~l~~~--~~~Yg~iRlwGSiGfi~a~~~~g~~~~~~~~~~~~~~~ 161 (400) T pfam03825 84 GAAQVTTFWPFFAVYLVNSLAYMPTLALTNSIAFANLRDP--VTDFPPIRVGGTVGWILASWPFVMWLVSLATVELSRWQ 161 (400) T ss_pred HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 9998524999999999999998350578999999971275--67787203576499999998899999995012056799 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC Q ss_conf 56788888777788876167886402210111111233310000000002567778876310014688876545543153 Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240 (398) Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398) T Consensus 162 ~~i~~~~~~ll~~-~~~~lp~~p~~~~~~~~~~~~~~~~~~~lLk~~~~~~Fl~~~~l~~~~h~~yy~F~s~yl~~~gg~ 240 (400) T pfam03825 162 LLIAAGVSALLAG-YALTLPHTPAKRKADDSVDKLLGLDAFKLLKNPRMAVFFVFSFLLGAILQIYNVFANAFLTNFVGF 240 (400) T ss_pred HHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9999999999999-997388888766555420002025799996591499999999999989999999899999984772 Q ss_pred CCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHH Q ss_conf 1101-58899886576778899999850015651246887788899999999873257-776403799899899999999 Q gi|254780967|r 241 GNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSN-HPIHLLIFIAFFFLASFQFGL 318 (398) Q Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 318 (398) T Consensus 241 ~~~~~~~~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~lR~---~l~a~~~~~~~~~~~~l~l~q~LHg~tfg~ 317 (400) T pfam03825 241 AVKLASIVLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWALRF---AFFAYGADPVPFGVALLLLSMIVHGVAYDF 317 (400) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 67799999999999999999999999998489999999999999999---999942674037999999999999999999 Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHHHHHHH-HHHHHHHHHHHHHHHCC Q ss_conf 99999999985346-676999999999999999-99999999998311------79999999-99999999999999422 Q gi|254780967|r 319 INSNFSSISMEPFS-HLAGTASSIFGFINTVIS-TILGIIIGQSFNGT------TYPITIGF-FGIAVSSFICILIVEKN 389 (398) Q Consensus 319 ~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~ 389 (398) T Consensus 318 f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~~~~~w~~~w~~~~~~~~~~~~~f~~~f~~ 397 (400) T pfam03825 318 FNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTDGSVDWQTLWLVFAGMALALAVLFMLFFRY 397 (400) T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999998688553879999999999708999999999999999706776873999999999999999999998368 |
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-27 Score=167.24 Aligned_cols=361 Identities=15% Similarity=0.152 Sum_probs=258.4 Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC Q ss_conf 57669999999999819998899999999999999999999999986508289999999999999998510011011100 Q gi|254780967|r 17 GIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLC 96 (398) Q Consensus 17 ~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~ 96 (398) T Consensus 27 ~itsvgPlL~~Ir~~~gls~s~aG-lLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~llli~~G~~iR~~~-~~~~L~~ 104 (395) T COG2807 27 AITSVGPLLDEIRQDLGLSFSVAG-LLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFL 104 (395) T ss_pred HHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHH T ss_conf 453003109999877166188888-99988999999887540799998756889999999999999998205-3889999 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 22321001111111000123321000111122122331000111111111122221111110145678888877778887 Q gi|254780967|r 97 MRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYY 176 (398) Q Consensus 97 ~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~ 176 (398) T Consensus 105 gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395) T COG2807 105 GTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH T ss_conf 9999974699998862699986645-401268769999998999887662657988626179999999999999999986 Q ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH Q ss_conf 61678864022101111112333100000000025677788763100146888765455431531101588998865767 Q gi|254780967|r 177 IRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMS 256 (398) Q Consensus 177 ~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398) T Consensus 184 ---Pq~~r~~---~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~ 257 (395) T COG2807 184 ---PQALREQ---AASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQL 257 (395) T ss_pred ---HHCCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH T ss_conf ---5303521---1012456675550035840689999997668899999999999999758787875029999999999 Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH Q ss_conf 7889999985001565124688778889999999987325777640379989989999999999999999985--34667 Q gi|254780967|r 257 IASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME--PFSHL 334 (398) Q Consensus 257 ~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 334 (398) T Consensus 258 ~~~ll~P~la~R~~n~r~~~~~~~~~~l~-G~~G~~-~~P~~~~~lw-----~~llG~G~G~~F~laL~li~~rs~~a~~ 330 (395) T COG2807 258 PTALLIPLLARRSKNQRPLVVLALLLMLV-GLVGLL-LAPGQLPILW-----ALLLGLGQGGAFPLALTLILLRSSDAAI 330 (395) T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHH-HHHHHHHHHH-----HHHHHCCCCHHHHHHHHHHHHHCCCHHH T ss_conf 89878899998831523499999999999-998899-8401479999-----9999076103789999999860578678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHCCHHHH Q ss_conf 6999999999999999999999999983117-999999-9999999999999994220003 Q gi|254780967|r 335 AGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIG-FFGIAVSSFICILIVEKNQMFR 393 (398) Q Consensus 335 ~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~r 393 (398) T Consensus 331 Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~i~ 391 (395) T COG2807 331 AAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNRYIR 391 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH T ss_conf 8998887630158987440166767897228808899999999999999865306127767 |
|
| >KOG2504 consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-28 Score=170.10 Aligned_cols=344 Identities=17% Similarity=0.162 Sum_probs=235.7 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC-CCCC Q ss_conf 999999998199988999999999999999999999999865082899999999999999985100110111002-2321 Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCM-RLIQ 101 (398) Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~-r~l~ 101 (398) T Consensus 67 v~~~~~~~~f~~s~~~~~-~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~ 145 (509) T KOG2504 67 LLFEELMDYFGSSSSQIA-WIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIG 145 (509) T ss_pred EEHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 328999987289820688-9999999999862406799887607448887788999989999988847999999999983 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 00111111100012332100011112212233100011111111112222111111014567888887777888761678 Q gi|254780967|r 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE 181 (398) Q Consensus 102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pe 181 (398) T Consensus 146 G~G~g~~~~paiviv~~YF-~kkR~lA~Gia~~GsGvG~~~~~~l~~~l~~-~~Gwr~~~l~~~~~~l~~~~~~~~~rp~ 223 (509) T KOG2504 146 GLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS-KYGWRGALLIFGGISLNVLVAGALLRPL 223 (509) T ss_pred CCCCHHHHCCHHHHHHHHH-HHHHHHHHHHEEECCCCEEEEHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 3521533113899887776-7545445420122476346756789999988-7086899999999999999999830787 Q ss_pred CCCH----------------------------HHHCCC---------------CCC--CCCCCC----CCCCCCCHHHHH Q ss_conf 8640----------------------------221011---------------111--123331----000000000256 Q gi|254780967|r 182 TLDP----------------------------RDVRPL---------------NLY--AILHSF----SLIFKHRASTLY 212 (398) Q Consensus 182 t~~~----------------------------~~~~~~---------------~~~--~~~~~~----~~~~~~~~~~~~ 212 (398) T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ll~~~~fl~~ 303 (509) T KOG2504 224 SPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLL 303 (509) T ss_pred CCCCCCHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHCCHHHHHH T ss_conf 65668514443213200110333311103577788887666544056760685100153000032020788615589999 Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 77788763100146888765455431531101588998865767788999998500156512468877888999999998 Q gi|254780967|r 213 NIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLV 292 (398) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 292 (398) T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~~a~l~sii~~~~i~gRi~~G~laD~~~~~~~~~~~~~l~~~gl~~-~~~ 382 (509) T KOG2504 304 ALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR-LFL 382 (509) T ss_pred HHHHHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHH-HHH T ss_conf 9999999998763344408778555984788999999998751206401265516763015798999999999999-988 Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH Q ss_conf 7325777640379989989999999999999999985346-676999999999999999999999999983117-99999 Q gi|254780967|r 293 QITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITI 370 (398) Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~ 370 (398) T Consensus 383 p--~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509) T KOG2504 383 P--FAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509) T ss_pred H--HCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH T ss_conf 6--135--789999999999852447887566899986398750369999999989998700213413220047730189 Q ss_pred HHHH Q ss_conf 9999 Q gi|254780967|r 371 GFFG 374 (398) Q Consensus 371 ~~~~ 374 (398) T Consensus 459 ~~~g 462 (509) T KOG2504 459 YFCG 462 (509) T ss_pred HHCC T ss_conf 8705 |
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-25 Score=156.11 Aligned_cols=373 Identities=13% Similarity=0.128 Sum_probs=234.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH-HHHHHHHHHHHHHHHHCC- Q ss_conf 65766999999999981999889999999999999999999999998650-----82899-999999999999985100- Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIV-MMFGLVIHIISTFIMVTI- 88 (398) Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~~~~~a- 88 (398) T Consensus 13 lP~~~~~~~l~~~Lr~~Gvsl~~IG-l-~~ll~LPw~l-KfLWAP~vDr~~~p~lG~rR~Wil~~Q~~l~~~l~~la~~~ 89 (402) T PRK11902 13 LPLALTSGTLQAWMTVEGLDIQTIG-F-FSLVGQAYIF-KFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIMAMAFLP 89 (402) T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHH-H-HHHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 4399999999999988799889999-9-9999999999-99998888640776688740799999999999999998079 Q ss_pred --CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf --110111002232100111111100012332100011112212233100011111111112222111111014567888 Q gi|254780967|r 89 --NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGV 166 (398) Q Consensus 89 --~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~ 166 (398) T Consensus 90 p~~~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~ 169 (402) T PRK11902 90 PHSALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAG 169 (402) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 66679999999999999999999999899998559988999999999999999999899999999988869999999999 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCC-CCH Q ss_conf 88777788876167886402210111111233310000000002567778876310-0146888765455431531-101 Q gi|254780967|r 167 ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGA-ILGFVNSSQQIYVGIYQLG-NLF 244 (398) Q Consensus 167 ~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 244 (398) T Consensus 170 l~ll~~~~~-l~~~e~~~~~~~~~~~~~~~~~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~pFl-l~dlG~s~~~i 247 (402) T PRK11902 170 LMLAGALTT-LWAPEPEVPARAPRSLGEAVVGPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLSTTFL-IRGAGFSAGEV 247 (402) T ss_pred HHHHHHHHH-HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHH T ss_conf 999999999-9288877544241037899999999999726799999999999989999999878999-97529999999 Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 588998865-7677889999985001565124688778889999999987325777640379989989999999999999 Q gi|254780967|r 245 PIAFAVGGF-AMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF 323 (398) Q Consensus 245 ~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398) T Consensus 248 g~~~~~~G~~a~i~G~~lGG~l~~r~g~~~~L~~~~~~~~l~~l~~~~la~---~~~~~~~l~~~i~~~~~~~g~~~~a~ 324 (402) T PRK11902 248 GIVNKTLGLAATIVGALAGGSLMVRLGLYRSLMLFGVLQAVSNLGYWLLAV---TPKHLWLMGLAIGVENLCGGMGTAAF 324 (402) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999879999999999999999999973899999999999999999999996---67757999999999999999999999 Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHH Q ss_conf 9999853-466769999999999999999999999999831179999999-999999999999994220003430 Q gi|254780967|r 324 SSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGF-FGIAVSSFICILIVEKNQMFRKTE 396 (398) Q Consensus 324 ~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~ 396 (398) T Consensus 325 ~a~~m~l~~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~~Gy~~fFi~~~~~~ip~l~ll~~~~~~~~~~~~~ 399 (402) T PRK11902 325 VALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEALGWPGFYLGTVLIALPGLALLWLMRNTIDRYEAQ 399 (402) T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999828866399999999999998999884399999981969999999999999999999988898876654 |
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-24 Score=147.38 Aligned_cols=361 Identities=12% Similarity=0.047 Sum_probs=235.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHH-HHHHHHCCCC Q ss_conf 988657669999999999819998899999999999999999999999986508289-99999999999-9998510011 Q gi|254780967|r 13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKI-VMMFGLVIHII-STFIMVTINS 90 (398) Q Consensus 13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~g~~~~~i-~~~~~~~a~~ 90 (398) T Consensus 15 ~~F~~~G~~~Pf~~l~L~~~G~s~~~IG-ii~a~~~~~~~v~~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 93 (383) T PRK11128 15 GYFFAYGVFLPFWSVWLKGQGYTPETIG-LLLGAGLVFRFLGSLLIAPRVKDPSQLIPALRLLALLTLIFAVAFWFGAHS 93 (383) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999973898989999-999999999999988899998634434899999999999999999998768 Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 01110022321001111111000123321000111122122331000111111111122221111110145678888877 Q gi|254780967|r 91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTF 170 (398) Q Consensus 91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~ 170 (398) T Consensus 94 f~~~~~~~~l~~~~~~~~~pl~dsl~~~~~~~-~-~~~YG~iRlwGSiGf~~~~l~~G~l~~~-~g~~~i~~~~~~~~-~ 169 (383) T PRK11128 94 FWLMFVAIGLFNLFFSPLVPLTDALANTWQKQ-I-GLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILTAGV-A 169 (383) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHH-H T ss_conf 99999999999999844763799999999655-4-5641588899889999999999999987-27017999999999-9 Q ss_pred HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH Q ss_conf 77888761678864022101111112333100000000025677788763100146888765455431531101588998 Q gi|254780967|r 171 ITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAV 250 (398) Q Consensus 171 ~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398) T Consensus 170 ~~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~llk~~~~~~fll~~~l~~~sh~~~y~F~~i~~~~~G~s~~~iG~lw~~ 247 (383) T PRK11128 170 SMLLGQLLRPTVMPQGESRQ--QESAGPAWLALLKEPTVWRFLLCVSLIQGSHAAYYSFSAIYWQAAGYSASTIGYLWSL 247 (383) T ss_pred HHHHHHHHCCCCCCCCCCCC--CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH T ss_conf 99999996787786433323--4556520999870818999999999999998999999999999859967399999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 86576778899999850015651246887788899999999873257776403799899899999999999999999853 Q gi|254780967|r 251 GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP 330 (398) Q Consensus 251 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398) T Consensus 248 ~v~aEI~~f~~~~rl~~r~g~~~ll~ia~~~~~lRw~---l~a~~----~~~~~~~~~QlLHg~tFg~~~~a~i~~i~~~ 320 (383) T PRK11128 248 GVVAEVLIFAFSKRLFRRWSARDLLLLSAVCGVIRWG---LMGST----TALPWLILVQILHCGTFAVCHLAAIRYIAAR 320 (383) T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999999999999982989999999999999999---99986----0399999999999999999999999999856 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH Q ss_conf 466769999999999999-999999999999831179999999999999999999994220 Q gi|254780967|r 331 FSHLAGTASSIFGFINTV-ISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQ 390 (398) Q Consensus 331 ~~~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (398) T Consensus 321 ~~~~~~~~Q~ly~~~~~Glg~~ig~~~~G~ly~~~G~---~~f~~ma~~al~~l~l~~~~~ 378 (383) T PRK11128 321 PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALIALPALFIRPKVV 378 (383) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHCCCC T ss_conf 9422789999999999889999999999999998567---899999999999797500145 |
|
| >TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750 This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-24 Score=149.16 Aligned_cols=354 Identities=13% Similarity=0.174 Sum_probs=250.8 Q ss_pred HHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHCCCCHHH Q ss_conf 657669999999-9998199988999999999999999999999999865082-89999999999999998510011011 Q gi|254780967|r 16 LGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGR-KIVMMFGLVIHIISTFIMVTINSFTG 93 (398) Q Consensus 16 ~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~g~~~~~i~~~~~~~a~~~~~ 93 (398) T Consensus 11 ~Agalq~PtLS~fL~~E~~~~p~~vG-~f~t~~ai~gi~vs~~la~~sD~~gdr~~Lil~cclla~l~~~lfA~nr~Y~~ 89 (377) T TIGR00899 11 IAGALQTPTLSLFLSEEVRARPAMVG-LFYTGSAIVGILVSQLLATRSDKQGDRKKLILFCCLLAVLACLLFAWNRNYFV 89 (377) T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHEH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 99998768999999887502851111-43455589999999999861113477189999999999999999998500688 Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC--CCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 10022321001111111000123321000111122--1223310001111111111222211111101456788888777 Q gi|254780967|r 94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKV--LSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI 171 (398) Q Consensus 94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~--~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~ 171 (398) T Consensus 90 l~~~gVLLss~~sta~Pq~faLarehad~~gr~~vMFss~~Raq~SLawvigpp~a-~~La~~~~F~vmf~~aa~~f~~~ 168 (377) T TIGR00899 90 LLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVLRAQISLAWVIGPPLA-FALALGFGFTVMFLAAAVAFVLC 168 (377) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999978867516889999998665227612789999999999999999999-99874202899999999999999 Q ss_pred HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHH Q ss_conf 78887616788640221011111123331000000000256777887631001468887654554315311-01588998 Q gi|254780967|r 172 TLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAV 250 (398) Q Consensus 172 ~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 250 (398) T Consensus 169 ~~l~~~~LPs~~~~~~~~~~~-----~~~~g~~~~r~~rLLfv~~~Lmw~~n~ly~i~mpl~li~EL~l~~kl~G~~~g~ 243 (377) T TIGR00899 169 GVLVWLLLPSVPRGAPGATTT-----LEVRGRLARRDTRLLFVACTLMWGCNILYIINMPLFLINELGLPDKLAGLMMGT 243 (377) T ss_pred HHHHHHHCCCCCCCCCHHCCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 999998677310001001000-----014774323542799999999975047888522789998625841899999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 86576778899999850015651246887788899999999873257776403799899899999999999999999853 Q gi|254780967|r 251 GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP 330 (398) Q Consensus 251 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398) T Consensus 244 AAGlEiP~M~~Agy~~~R~Gkr~Lm~~A~~~-----g~~fy~~~~~~~--~~~~~~~lq~lna~fiGi~~g~gmlYfqdL 316 (377) T TIGR00899 244 AAGLEIPFMLLAGYLIKRLGKRRLMLLAVVA-----GVAFYTGLLLAN--SLWALLMLQLLNAIFIGILAGIGMLYFQDL 316 (377) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7655647999977888887589999999999-----999999998516--289999999999999999998899999862 Q ss_pred HHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 466769-99999999999-99999999999998311799999999999999999999 Q gi|254780967|r 331 FSHLAG-TASSIFGFINT-VISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILI 385 (398) Q Consensus 331 ~~~~~G-~a~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (398) T Consensus 317 mP~~~gs~AttLy~n~~~G~G~i~ag~v~G~~~e--~W~~~Avy~~~~~~~~~a~~~ 371 (377) T TIGR00899 317 MPGRAGSAATTLYTNTSRGVGWIIAGSVAGILAE--IWSYHAVYWFAIVMLIVALLV 371 (377) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH T ss_conf 7314458999999875213899999988669888--755799999999999999999 |
They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane. |
| >TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-26 Score=158.72 Aligned_cols=362 Identities=16% Similarity=0.216 Sum_probs=255.3 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCHHHHCCCC Q ss_conf 999999998199988999999999999999999999999865082899999999999999985100----1101110022 Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI----NSFTGMLCMR 98 (398) Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----~~~~~l~~~r 98 (398) T Consensus 50 lA~PyL~~~GlfSk~eLG-~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~~l~~~~PW~TSsiaiMfv~~ 128 (468) T TIGR00712 50 LAIPYLVEQGLFSKAELG-LVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVMLLMGLVPWATSSIAIMFVLL 128 (468) T ss_pred HCCCHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf 327056755752103578-9999999986456788603556767216877889999999999842140357999999999 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC---CCCCC--------CCCCCCCHHHHHHHHH Q ss_conf 321001111111000123321000111122122331000111111111---12222--------1111110145678888 Q gi|254780967|r 99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI---GQATV--------ALSGGWIGIFVCMGVI 167 (398) Q Consensus 99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i---g~~l~--------~~~~gWr~~f~~~~~~ 167 (398) T Consensus 129 Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~~~g~ea~akd~W~~~ly~Pa~~ 208 (468) T TIGR00712 129 FLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVSTHGIEAQAKDTWKSALYFPAII 208 (468) T ss_pred HHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 98211048879885442000002357786257621520025305899999999998752010022356678876447999 Q ss_pred HHHHHHHHHHHCCCCCC---------------HHHHCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH Q ss_conf 87777888761678864---------------022101-----1111123331000000000256777887631001468 Q gi|254780967|r 168 TTFITLWYYIRFPETLD---------------PRDVRP-----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV 227 (398) Q Consensus 168 ~~~~~~~~~~~~pet~~---------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (398) T Consensus 209 Aii~a~~~~~~~RDTPQSCGLP~IE~yrNDYP~~~~~~~~E~eLTaK~I--~~~YVL~NKlLWYIA~ANVFVYl~RYGvl 286 (468) T TIGR00712 209 AIIVALLVFLLMRDTPQSCGLPPIEEYRNDYPDDYNEKTAEKELTAKEI--FVQYVLKNKLLWYIAIANVFVYLVRYGVL 286 (468) T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999988761787788668820015788234541001210147777--77776500478999999999888764010 Q ss_pred HHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-------- Q ss_conf 887654554315311-01588998865767788999998500156512468877888999999998732577-------- Q gi|254780967|r 228 NSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-------- 298 (398) Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 298 (398) T Consensus 287 ~WsP~YL~EvK~F~~~~s~WaY~lYEyAgiPGTlLCGW~SDk~Fkg~Rg~~Gv~FM~lv~~Av~vYW~NPAgpeaela~y 366 (468) T TIGR00712 287 DWSPTYLKEVKHFSLEDSAWAYFLYEYAGIPGTLLCGWVSDKVFKGKRGATGVLFMILVTIAVVVYWLNPAGPEAELANY 366 (468) T ss_pred CCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH T ss_conf 23621465411457676514667767642641000212430000246420578999999999888743799740356654 Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH- Q ss_conf ------7640379989989999999999999999985346-676999999999999999999-9999999831179999- Q gi|254780967|r 299 ------PIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTIL-GIIIGQSFNGTTYPIT- 369 (398) Q Consensus 299 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~- 369 (398) T Consensus 367 ~awyeNPy~lvD~i~~~~IGFLIYGPVM-LIGL~AleLAPKKAAGTAAG~TGlFGYlGGsv~A~Ai~G~~v~~f~WdGGF 445 (468) T TIGR00712 367 SAWYENPYQLVDFILLIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGFVVDRFGWDGGF 445 (468) T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE T ss_conf 5552270578989999998888754799-998889740674011121003455553335764555531232201268653 Q ss_pred HHHHHHHHHHHHHHHHHHC Q ss_conf 9999999999999999942 Q gi|254780967|r 370 IGFFGIAVSSFICILIVEK 388 (398) Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (398) T Consensus 446 ~v~Igg~iLAv~lL~~v~~ 464 (468) T TIGR00712 446 IVLIGGSILAVVLLLVVMV 464 (468) T ss_pred EEEHHHHHHHHHHHHHHHH T ss_conf 6532457999999999872 |
The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane. |
| >PRK11195 major facilitator family transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=150.60 Aligned_cols=371 Identities=13% Similarity=0.100 Sum_probs=219.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999886576699999999998199988999999999999999999999999865082899999999999999985100 Q gi|254780967|r 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI 88 (398) Q Consensus 9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a 88 (398) T Consensus 10 ~tQfl~AfnDN~ll~~~i~ll~~~~~~~~~~~-ll~~~FiLPfvLfsa~aG~lADr~~K~~vm~~~~~iki~~~~~~~~g 88 (415) T PRK11195 10 AAQFFSALADNALLFAAIALLKELHAPDWSQP-LLQMVFVLAYVLLAPFVGAFADSFPKGRVMFIANGIKLAGCLLMLFG 88 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999687789999999999996558189999-99999999999997647787661532899999999999999999999 Q ss_pred CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC---------H Q ss_conf 1101110022321001111111000123321000111122122331000111111111122221111110---------1 Q gi|254780967|r 89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI---------G 159 (398) Q Consensus 89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr---------~ 159 (398) T Consensus 89 ~~~---ll~~~l~g~~sA~f~PaKYgiLpell~~~~L~~aNglve~~T~~AILlGti~gg~L~~~~~~~~~~~~~~~~~~ 165 (415) T PRK11195 89 AHP---LLAYGLVGLGAAAYSPAKYGILTELLPGDKLVKANGWIEGSTIAAILLGTVLGGVLADPHVASHLLAHLPLIDT 165 (415) T ss_pred HHH---HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH T ss_conf 999---99999999988984509987899875940205666299999999999999999999733100013201101011 Q ss_pred HH----HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH Q ss_conf 45----67888887777888761678864022101111----11233310000000002567778876310014688876 Q gi|254780967|r 160 IF----VCMGVITTFITLWYYIRFPETLDPRDVRPLNL----YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQ 231 (398) Q Consensus 160 ~f----~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (398) T Consensus 166 ~~~~a~~vv~~~~~l-a~~~sl~IP~~~a~~~~~~~~~~~l~~~~~~~~~~L~~~~~~~~sllg~s~FW~vga~l~~~~~ 244 (415) T PRK11195 166 PAEAALAVIALAYAL-AALANLFIPDTGARYPGQSWNPIALTRDFADACRVLWRDKLGQISLAVTTLFWGAGATLRFLVL 244 (415) T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 599999999999999-9999676999997677777787789999999999998673999999999999999999999899 Q ss_pred HHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH Q ss_conf 54554315311-01588998865767788999998500156512468877888999999998732577764037998998 Q gi|254780967|r 232 QIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFF 310 (398) Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (398) T Consensus 245 ~~a~~~Lg~~~~~~~~Lla~~avGIaiGs~la~~l~~~~~~~~~lP~Gi~m-g~--~v~-~~~~~--~--~~~~a~~ll~ 316 (415) T PRK11195 245 KWAPVALGIDLSTAAYLQAVVAIGIAVGAGAAARLVPLRTVLRVLPAGILM-GV--VVI-LMALQ--H--SLLPAYPLLI 316 (415) T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHH-HH--HHH-HHHHH--H--HHHHHHHHHH T ss_conf 999998599688999999999999999999999993797220632299999-99--999-99986--0--0799999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999999999999999853466--7699999999999999999999999998311799999999999999999999942 Q gi|254780967|r 311 LASFQFGLINSNFSSISMEPFSH--LAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEK 388 (398) Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~--~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (398) T Consensus 317 llG~~gG~fvVPLnAliQ~r~~~~~~aGr~iA~qN~~~n~~m~~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~ 395 (415) T PRK11195 317 LIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK-LGVPVVPVIVGFGLFVALAMWLLWR 395 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 999972530016569987547220245665320019999999999999999998-7997999999999999999999999 Q ss_pred CHHHH Q ss_conf 20003 Q gi|254780967|r 389 NQMFR 393 (398) Q Consensus 389 ~~~~r 393 (398) T Consensus 396 ~~~~~ 400 (415) T PRK11195 396 WHRRN 400 (415) T ss_pred HHHHC T ss_conf 98710 |
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=151.87 Aligned_cols=371 Identities=14% Similarity=0.170 Sum_probs=238.0 Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH Q ss_conf 389999999999886-5766999999999981999-----8899999999999999999999999986508289999999 Q gi|254780967|r 2 EFVIVIAMLMAINSL-GIDIILPCLPKISDSLHLS-----NENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGL 75 (398) Q Consensus 2 ~~i~~l~~~~~~~~~-~~~~~~p~lp~i~~~l~~s-----~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~ 75 (398) T Consensus 2 ~w~~~~g~~~m~~~~g~~YtW~L~~~~l~~~l~~~~~Pdm~~a~~-~~ft~~~~~~a~s~~~gG~~~d~fGpR~~~mlgg 80 (429) T TIGR00890 2 WWLVLVGTVIMCFVSGYVYTWTLLAPPLGRKLGVKMYPDMVSAVA-VSFTLLLIVLAVSQPVGGKLADKFGPRLVAMLGG 80 (429) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHH T ss_conf 489999999999999987745544578887507888862268999-9999999998622221242210006638899999 Q ss_pred HHHHHHH--HHHHCCCCHHHHCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCC Q ss_conf 9999999--98510011011100223-2100111111100012332100011112212233100011111-111112222 Q gi|254780967|r 76 VIHIIST--FIMVTINSFTGMLCMRL-IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPIL-APSIGQATV 151 (398) Q Consensus 76 ~~~~i~~--~~~~~a~~~~~l~~~r~-l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~i-gp~ig~~l~ 151 (398) T Consensus 81 il~~~G~Gs~~~a~~~s~~~LyL~~G~l~s~G~Gi~Yg~al~tA~kWFP-Dk~GLA~G~~~~GyGlGs~~~~PL~~~-~~ 158 (429) T TIGR00890 81 ILLGLGFGSIFAALADSLAALYLTYGVLASAGVGIVYGIALSTAVKWFP-DKRGLASGIIIGGYGLGSLVLSPLITS-VL 158 (429) T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH-HC T ss_conf 9999768899987502189999998788779999999989720312265-530389999999864788863035776-33 Q ss_pred C----------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC--------HHHHCCCC----CCCCCCCCCCC Q ss_conf 1----------------11111014567888887777888761678864--------02210111----11123331000 Q gi|254780967|r 152 A----------------LSGGWIGIFVCMGVITTFITLWYYIRFPETLD--------PRDVRPLN----LYAILHSFSLI 203 (398) Q Consensus 152 ~----------------~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~--------~~~~~~~~----~~~~~~~~~~~ 203 (398) T Consensus 159 ~PldyrvndqGfftqedl~~~~~~aF~~~G~~~l~~i~~~a~~~~~P~~~WlPkG~~~E~~~~~~~~~~~~~~d~~~~~~ 238 (429) T TIGR00890 159 EPLDYRVNDQGFFTQEDLLEGVEAAFVYMGIVALLVIVLLAFLIKYPPGDWLPKGIHVEEEQEVKKSIEVSEKDYTVAEM 238 (429) T ss_pred CCHHCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHH T ss_conf 60210032564200455664579999999999999999999987078866676656520033134002300023311776 Q ss_pred CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH Q ss_conf 000000256777887631001468887654554315311-0158899886576778899999850015651246887788 Q gi|254780967|r 204 FKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIF 282 (398) Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 282 (398) T Consensus 239 lr~~~fWvL~~~f~~~a~~~L~~~g~~~~yg~~L~~~~~g~l~~~vs~~~~~Ng~~R~~~G~~sDk~gr~~~m~~~~~is 318 (429) T TIGR00890 239 LRTPQFWVLYVSFFLAAVSGLLLIGLLKPYGRSLGDLDVGALVLAVSIISLFNGGGRPVLGAVSDKIGRLKTMSIVFGIS 318 (429) T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 42336999999999988899999999999888888889999999999999999888999999974310055667776899 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----H---HHHH------HHHHHHHH Q ss_conf 89999999987325777640379989989999999999999999985346-676----9---9999------99999999 Q gi|254780967|r 283 FMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLA----G---TASS------IFGFINTV 348 (398) Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----G---~a~~------l~~~~~~~ 348 (398) T Consensus 319 av~~~~~~~~~~~~n~----V~FlA~~~~~~ft~Gg~~~lFP~l~s~~FG~~~~~~NYG~~y~A~aGyrireymntfqs~ 394 (429) T TIGR00890 319 AVGMLAMLFIPKISND----VLFLALVALVAFTWGGTFSLFPSLVSDIFGPKYSAANYGLLYTAKAGYRIREYMNTFQSV 394 (429) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999989987422----899999999984230132111022100001022145303787633136899998888889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999999831179999999999999999 Q gi|254780967|r 349 ISTILGIIIGQSFNGTTYPITIGFFGIAVSSFI 381 (398) Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 381 (398) T Consensus 395 agi~gg~~~~~~~~~~G~--~~~f~~~~~~~l~ 425 (429) T TIGR00890 395 AGIFGGLIASLVLTEIGF--KVTFLVTAALALL 425 (429) T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH T ss_conf 999999999999988849--9999999999999 |
; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-23 Score=142.20 Aligned_cols=376 Identities=13% Similarity=0.064 Sum_probs=217.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHH Q ss_conf 9999999988657669999999999-8199988999999999999999999999999865082899999--999999999 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMF--GLVIHIIST 82 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~--g~~~~~i~~ 82 (398) T Consensus 12 ~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIG-li~s~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~~~~~~ 90 (418) T PRK09528 12 LFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTG-IIFSAISLFALLFQPLYGVISDKLGLKKYLLWIISGLLVLFGP 90 (418) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999996767898999999-9999999999999888999742024127899999999999999 Q ss_pred -HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC Q ss_conf -9851001----1011-100223210011111110001233210001111221223310001111111111222211111 Q gi|254780967|r 83 -FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG 156 (398) Q Consensus 83 -~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g 156 (398) T Consensus 91 ~f~~vf~pll~~~~~lg~~~~~i~~~~~~~a~~pl~ds~~~~~s~--~~~~~YG~iRlwGSiGfavas~~~G~l~~~~-- 166 (418) T PRK09528 91 FFIYVFAPLLQYNILVGAIVGGIYLGFGFNAGAGAIEAYIEKVSR--NSGFEYGRARMFGSLGWALCAFFAGILFNIN-- 166 (418) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-- T ss_conf 999999999999999999999999999873466389999999987--7589762478999999999999988987617-- Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH----H Q ss_conf 10145678888877778887616788640221----011111123331000000000256777887631001468----8 Q gi|254780967|r 157 WIGIFVCMGVITTFITLWYYIRFPETLDPRDV----RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV----N 228 (398) Q Consensus 157 Wr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 228 (398) T Consensus 167 ~~~~f~~~s~~~li~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~ 246 (418) T PRK09528 167 PQINFWLGSGCALILAVLLFFAKPDAPSTATVANAVGANPSAVSLKDALALFKLPKFWFLVLYVIGVACIYDVFDQQFPN 246 (418) T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 32899999999999999999846765322100000014668877999999836749999999999999999999988889 Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH Q ss_conf 87654554315311015889988657677889999985001565124688778889999999987325777640379989 Q gi|254780967|r 229 SSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF 308 (398) Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (398) T Consensus 247 f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~r~g~k~~Llla~~~~~lRw~~~---~----~~~~~~~i~~~ 319 (418) T PRK09528 247 FFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIINRIGAKNALLLAGTIMAVRIIGS---A----FATNALEVSIL 319 (418) T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---H----HCCCHHHHHHH T ss_conf 9999977016671367699999999999999999999986080999999999999999986---3----00138999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHH Q ss_conf 989999999999999999985346-676999999999-999999999999999983117999999-9999999-999999 Q gi|254780967|r 309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGF-INTVISTILGIIIGQSFNGTTYPITIG-FFGIAVS-SFICIL 384 (398) Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~ 384 (398) T Consensus 320 qlLHa~tf~l~~~a~~~yI~~~~~~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~~~~y~~~g~i~~~~tlis~f 399 (418) T PRK09528 320 KLLHAFEVPFLLVGIFKYITSNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQDTYLVLGLIVLGFTLISAF 399 (418) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999858888899999999999999999997420688999844579999999999999999999 Q ss_pred HHHCCHHHH Q ss_conf 994220003 Q gi|254780967|r 385 IVEKNQMFR 393 (398) Q Consensus 385 ~~~~~~~~r 393 (398) T Consensus 400 ~l~~~~~~~ 408 (418) T PRK09528 400 TLSGKRPLS 408 (418) T ss_pred HHCCCCCCC T ss_conf 735788675 |
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-22 Score=138.89 Aligned_cols=365 Identities=14% Similarity=0.100 Sum_probs=219.2 Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HH Q ss_conf 999886576699999-999998199988-9999999999999999999999998650828999999999999999---85 Q gi|254780967|r 11 MAINSLGIDIILPCL-PKISDSLHLSNE-NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF---IM 85 (398) Q Consensus 11 ~~~~~~~~~~~~p~l-p~i~~~l~~s~~-~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~---~~ 85 (398) T Consensus 19 qflgAfnDn~~K~~l~~~~~~~~~~~~~~~l~~l~~~lFiLPF~Lfsa~aG~lADr~~K~~vir~~k~~Ei~im~l~~~~ 98 (1150) T PRK08633 19 QFLNAFNDLGHKIIIQNTLIKAYDGSEAGILTAIVNALILLPFLLFSSPAGFLADKFPKNRVIVIVALFEVGLTLLIVAG 98 (1150) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99809999999999999999981851357999999999999999986427774230748899999999999999999999 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-------CC Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111-------10 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-------WI 158 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-------Wr 158 (398) T Consensus 99 ~~~~~~~~l~~~lflmg~qSa~fgPaKYgiLpe~l~~~eL~~aNglve~~Tf~AIL~Gti~gg~l~~~~~~~~~~~~~~~ 178 (1150) T PRK08633 99 YYLGWFWLAFAATFLLGAQSAIYSPAKYGIIKELVGKENLSRANGLIEAVTIVAILAGTALFSFLFESLYGYNQTSEILQ 178 (1150) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH T ss_conf 99722999999999999999876179998888767922052766099999999999999999999986435555310255 Q ss_pred HHHHHHHH--HHHHHHHHHHHHCCCCCCHHHHCCCCC--------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH Q ss_conf 14567888--887777888761678864022101111--------11233310000000002567778876310014688 Q gi|254780967|r 159 GIFVCMGV--ITTFITLWYYIRFPETLDPRDVRPLNL--------YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVN 228 (398) Q Consensus 159 ~~f~~~~~--~~~~~~~~~~~~~pet~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (398) T Consensus 179 ~~~~~~~~l~~~Av~g~~~s~~IP~~~~~~p~~~~~~n~~~~~~~~~~~~~l~~~~~~~~l~~silgiSwFW~~ga~~l~ 258 (1150) T PRK08633 179 RIAPLGIVLLAVALIELFFAFRLPKVPATAANRPLVFNPKDYLRGSLLIENLKLLRHDRNLWLAIIGLSYFWFVSQLLLA 258 (1150) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 78999999999999999998209899888888833578268774677999999998593889999999999999999999 Q ss_pred HHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH Q ss_conf 876545543153110--158899886576778899999850015651246887788899999999873257776403799 Q gi|254780967|r 229 SSQQIYVGIYQLGNL--FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI 306 (398) Q Consensus 229 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (398) T Consensus 259 ~~p~~~k~~Lg~~~~~~~~~Lla~~~iGI~~GS~la~~ls~~~ie~glvP~Ga~g~~l~~~~---l~~~----~~~~~~~ 331 (1150) T PRK08633 259 NFPAYGKEELGLDNTFQVQYLLAASAIGIGIGSLLAGRLSKRYIELGIVPLGAFGMTLMLFL---LPAA----SSLPSVL 331 (1150) T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH---HHHH----HHHHHHH T ss_conf 88999999838980899999999999999999999999967966425458899999999999---9987----6589999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89989999999999999999985-346676999999999999999999999999983117999999999999999999 Q gi|254780967|r 307 AFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICI 383 (398) Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (398) T Consensus 332 ~~l~~~G~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNi~n~~~mv~~~-~~~~~l~~~~~s~~~~f~~la~~~~~~~ 408 (1150) T PRK08633 332 LLFFLFGFSGGLFIVPLNALIQFRAPEKELGEVLAANNFLQNVGMLLFL-GLTWLFSYLGISPAGLFYFIALVTLIGT 408 (1150) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHH T ss_conf 9999999986775677899987418865523422898999999999999-9999999818899999999999999999 |
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-21 Score=133.29 Aligned_cols=365 Identities=15% Similarity=0.179 Sum_probs=231.2 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH-HHHHHHHHHHHHHHHHCC---C Q ss_conf 66999999999981999889999999999999999999999998650-----82899-999999999999985100---1 Q gi|254780967|r 19 DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIV-MMFGLVIHIISTFIMVTI---N 89 (398) Q Consensus 19 ~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~~~~~a---~ 89 (398) T Consensus 29 ~L~~~tL~~WLr~~Gvsl~tIGl--fslv~lpYsl-KFLWAPlvDr~~~P~LGrRRsWill~Q~~l~~~l~~ma~~~P~~ 105 (490) T PRK11010 29 ALTSGTLQAWMTVENIDLKTIGF--FSLVGQAYVF-KFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGT 105 (490) T ss_pred HHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 99997999999887998899999--9999999999-99988788564787787347999999999999999999759675 Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH Q ss_conf 101110022321001111111000123321000111122122331000111111111122221-1111101456788888 Q gi|254780967|r 90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA-LSGGWIGIFVCMGVIT 168 (398) Q Consensus 90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~-~~~gWr~~f~~~~~~~ 168 (398) T Consensus 106 ~l~~~a~~allvAf~SATQDIaiDAyRiE~l~~~eqg~gaa~~v~GYRigmlvsGa~a-L~lAd~~~gW~~~Y~~mA~lm 184 (490) T PRK11010 106 QLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLA-LWLADRWLGWQGMYWLMAALL 184 (490) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHH T ss_conf 7999999999999998778999989999836861335899999999999999987999-999876226599999999999 Q ss_pred HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHCCCCCCHHHH Q ss_conf 777788876167886402210111111233310000000002567778876-3100146888765455431531101588 Q gi|254780967|r 169 TFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLT-MGAILGFVNSSQQIYVGIYQLGNLFPIA 247 (398) Q Consensus 169 ~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398) T Consensus 185 l~g~~~-tl~~pEP~~~~~~~~~l~~avv~Pf~~Ff~R~~a~lIL~fI~lYKlgDa~~g~M~~pFyl~dlGFS~~eIa~v 263 (490) T PRK11010 185 IPCIIA-TLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVV 263 (490) T ss_pred HHHHHH-HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH T ss_conf 999999-9838886555433137999999999999970689999999999996799999986688774328888899988 Q ss_pred HHHHH-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99886-57677889999985001565124688778889999999987325777640379989989999999999999999 Q gi|254780967|r 248 FAVGG-FAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI 326 (398) Q Consensus 248 ~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (398) T Consensus 264 ~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g---~~~~~l~~aI~~Enf~~G~gtaAfvAy 340 (490) T PRK11010 264 NKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITD---KNLYSMGAAVFFENLCGGMGTAAFVAL 340 (490) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 85899999999999999999997299999999999996789999999708---848999999999988878999999999 Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH Q ss_conf 985-34667699999999999999999999999998311799999999999999999999942200 Q gi|254780967|r 327 SME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQM 391 (398) Q Consensus 327 ~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (398) T Consensus 341 LssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lve~~Gw~~FFi~t~~~~IP~llLL~~~r~~l 406 (490) T PRK11010 341 LMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQTL 406 (490) T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 998538322599999999999722563156588984751838799999999989999999997353 |
|
| >KOG2563 consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=133.18 Aligned_cols=389 Identities=14% Similarity=0.112 Sum_probs=228.1 Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH Q ss_conf 38999999999988657----66999999999981999889999999999999999999999998650828999999999 Q gi|254780967|r 2 EFVIVIAMLMAINSLGI----DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI 77 (398) Q Consensus 2 ~~i~~l~~~~~~~~~~~----~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~ 77 (398) T Consensus 43 RW~vLl~~slL--~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~-wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l 118 (480) T KOG2563 43 RWVVLLAFSLL--NFSNGMQWIQYAPINNYVNSFYG-SSSAAD-WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL 118 (480) T ss_pred HHHHHHHHHHH--HHCCCCHHEEEHHHHHHHHHHHC-CHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH T ss_conf 73999999999--71472010111237779988722-127899-999899999888777788762013148899999999 Q ss_pred HHHHHHHHHCCC------CHH--HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC Q ss_conf 999999851001------101--110022321001111111000123321000111122122331000111111111122 Q gi|254780967|r 78 HIISTFIMVTIN------SFT--GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQA 149 (398) Q Consensus 78 ~~i~~~~~~~a~------~~~--~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~ 149 (398) T Consensus 119 n~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi 198 (480) T KOG2563 119 NGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI 198 (480) T ss_pred HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCE T ss_conf 99989874101575556421135567768899876527112660787863793233434467874255878997605755 Q ss_pred CCC-----CCCCCCH--HHHHHHHHHHHHHHHHHHHCC---CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 221-----1111101--456788888777788876167---886402210111111233310000000002567778876 Q gi|254780967|r 150 TVA-----LSGGWIG--IFVCMGVITTFITLWYYIRFP---ETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLT 219 (398) Q Consensus 150 l~~-----~~~gWr~--~f~~~~~~~~~~~~~~~~~~p---et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (398) T Consensus 199 lV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~ 278 (480) T KOG2563 199 LVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIG 278 (480) T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH T ss_conf 60699875116788999999999999999999997157899989766776441375789999997384569999998532 Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 31001468887654554315311015889988657677889999985001565124688778889999999987325777 Q gi|254780967|r 220 MGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP 299 (398) Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (398) T Consensus 279 ~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~-~~l~~~t~~~~ 357 (480) T KOG2563 279 LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT-LMLLTCTLFLG 357 (480) T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCC T ss_conf 89999999984421012667742243567999998899998887544355358999999999899999-99987510578 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH Q ss_conf 640379989989999999999999999985-34667699999999999999999999999998311-----799999999 Q gi|254780967|r 300 IHLLIFIAFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-----TYPITIGFF 373 (398) Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~ 373 (398) T Consensus 358 ~~viv~~t~~~-~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 436 (480) T KOG2563 358 DSVIVFTTCGL-LGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLT 436 (480) T ss_pred CEEEHHHHHHH-HHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH T ss_conf 46750566899-99863378885346653542456776661267763467899999999987305688787765146759 Q ss_pred HHHHHHHHHHHHHHCCHHHHHHH Q ss_conf 99999999999994220003430 Q gi|254780967|r 374 GIAVSSFICILIVEKNQMFRKTE 396 (398) Q Consensus 374 ~~~~~~~~~~~~~~~~~~~r~~~ 396 (398) T Consensus 437 ~~~~l~~~lva~~r~~y~R~~~e 459 (480) T KOG2563 437 VSALLGAILVAFFRPDYRRLRAE 459 (480) T ss_pred HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99998799976300567767665 |
|
| >KOG0253 consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=125.28 Aligned_cols=366 Identities=12% Similarity=0.142 Sum_probs=201.8 Q ss_pred HHHHHHHHHHHH--HHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 999999886576--6999--999999981999889999999999999999999999998650828999999999999999 Q gi|254780967|r 8 AMLMAINSLGID--IILP--CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF 83 (398) Q Consensus 8 ~~~~~~~~~~~~--~~~p--~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 83 (398) T Consensus 80 ~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~-llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~ 158 (528) T KOG0253 80 FFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAP-LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV 158 (528) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHHHHH T ss_conf 8886558999888999999987887742256666565-778888752214353410004044110211134777888887 Q ss_pred HHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 85100110111002232100111111100012332100011112212233100011111111112222111111014567 Q gi|254780967|r 84 IMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163 (398) Q Consensus 84 ~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~ 163 (398) T Consensus 159 is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la-w~vm~~~gwr~~l~~ 235 (528) T KOG0253 159 ISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA-WGVMSNFGWRYLLFT 235 (528) T ss_pred HHCCCCCEEHHHHHHHHHHCCCCC-CCHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHH T ss_conf 524798731146788788625788-608677787744676777210478-98877999999999-999875129999999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHH----------------------------------HHCCC-----------CCCCCCC Q ss_conf 88888777788876167886402----------------------------------21011-----------1111233 Q gi|254780967|r 164 MGVITTFITLWYYIRFPETLDPR----------------------------------DVRPL-----------NLYAILH 198 (398) Q Consensus 164 ~~~~~~~~~~~~~~~~pet~~~~----------------------------------~~~~~-----------~~~~~~~ 198 (398) T Consensus 236 ~~~-pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg 314 (528) T KOG0253 236 SST-PLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRG 314 (528) T ss_pred HHH-HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHCCCCCCCC T ss_conf 870-8999999996256574104543985779999999998448878961333002234444330000111012235554 Q ss_pred CCCCCCCCCHHHHHH-HHHHHHHHCCHHHHHHH---HHHHHHHC-------------------CC-CCCHHHHHHHHHHH Q ss_conf 310000000002567-77887631001468887---65455431-------------------53-11015889988657 Q gi|254780967|r 199 SFSLIFKHRASTLYN-IANSLTMGAILGFVNSS---QQIYVGIY-------------------QL-GNLFPIAFAVGGFA 254 (398) Q Consensus 199 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~-------------------~~-~~~~~~~~~~~~~~ 254 (398) T Consensus 315 ~~~nLls-p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsla 393 (528) T KOG0253 315 GTTNLLS-PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLA 393 (528) T ss_pred CHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH T ss_conf 4576537-677777799999997037998889999999986057455301024168776404786405578999999986 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H Q ss_conf 677889999985001565124688778889999999987325777640379989989999999999999999985346-6 Q gi|254780967|r 255 MSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-H 333 (398) Q Consensus 255 ~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 333 (398) T Consensus 394 efPGlLIt~~iverlGRKkTMal~l~~f~if----lfll~~c~~r-n~--~tvllf~arafisg~fqvaYvYtPEVyPTa 466 (528) T KOG0253 394 EFPGLLITGVIVERLGRKKTMALSLILFGIF----LFLLTTCKTR-NA--YTVLLFTARAFISGAFQVAYVYTPEVYPTA 466 (528) T ss_pred HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH----HHHHHHHCCC-CH--HHHHHHHHHHHHHCHHEEEEEECCCCCCHH T ss_conf 2870667999999863135889999999999----9999985284-16--577999999998420008999567535214 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 7699999999999999999999999998311-799999999999999999999942 Q gi|254780967|r 334 LAGTASSIFGFINTVISTILGIIIGQSFNGT-TYPITIGFFGIAVSSFICILIVEK 388 (398) Q Consensus 334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 388 (398) T Consensus 467 vRatgvGtcSsmaRIg-gI~~p~iA~~~e~s~sl~i~-vy~~~~ilagIavcffPi 520 (528) T KOG0253 467 VRATGVGTCSSMARIG-GIFSPVIAMRAELSTSLPIF-VYGALFILAGIAVCFFPI 520 (528) T ss_pred HHHCCHHHHHHHHHHH-HHHHHHHHHHHCCCEEEHHH-HHHHHHHHHHHHHEEEEE T ss_conf 4331300356677640-13226999985165244199-998999999888546010 |
|
| >KOG4686 consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-18 Score=116.53 Aligned_cols=352 Identities=16% Similarity=0.157 Sum_probs=196.8 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHH---HCCCCHHHHCCCCCCCC Q ss_conf 99998199988999999999999999999999999865-082899999999999999985---10011011100223210 Q gi|254780967|r 27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR-FGRKIVMMFGLVIHIISTFIM---VTINSFTGMLCMRLIQG 102 (398) Q Consensus 27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~~~~~---~~a~~~~~l~~~r~l~G 102 (398) T Consensus 69 ~fk~d~ni~~akft-LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459) T KOG4686 69 DFKLDSNIEYAKFT-LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459) T ss_pred HHHCCCCCCEEEEE-EEEEECCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEC T ss_conf 53046653413324-54432217877776541121101230347789999999997899982208989999985131432 Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC------C---HHHHHHHHHHHHHHH Q ss_conf 0111111100012332100011112212233100011111111112222111111------0---145678888877778 Q gi|254780967|r 103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW------I---GIFVCMGVITTFITL 173 (398) Q Consensus 103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW------r---~~f~~~~~~~~~~~~ 173 (398) T Consensus 148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~-~~~~~~~~~ghT~LG~~l~~~~~tc~~sl 226 (459) T KOG4686 148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD-TMGRMFPGVGHTLLGLWLCFEVKTCKQSL 226 (459) T ss_pred CCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 37323364523234878627430401567888987606200134088999-99976542028899999999999999999 Q ss_pred HHHH--HCCCCCCHH----HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHH Q ss_conf 8876--167886402----210111111233310000000002567778876310014688876545543153110-158 Q gi|254780967|r 174 WYYI--RFPETLDPR----DVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPI 246 (398) Q Consensus 174 ~~~~--~~pet~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 246 (398) T Consensus 227 ical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~-~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~ 304 (459) T KOG4686 227 ICALSLGLSDDRAERILHLEEGFLGEEPKLTDVN-TF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGN 304 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC T ss_conf 9999853266678888765317666876113565-56-763999999999999998777642377778761887542244 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89988657677889999985001565124688778889999999987325777640379989989999999999999999 Q gi|254780967|r 247 AFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI 326 (398) Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (398) T Consensus 305 i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~ls---Py~~m---~~lGLsysllAcslWP~ 376 (459) T KOG4686 305 ILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLS---PYTSM---TFLGLSYSLLACSLWPC 376 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH--HCC---HHHHH---HHHHHHHHHHHHHHHHH T ss_conf 56645534335245677767652664215789999999876667753--415---79889---99850088899887433 Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---HHHHHHHHHHHHHHHHHCCH Q ss_conf 985346-676999999999999999999999999983117--99999---99999999999999994220 Q gi|254780967|r 327 SMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT--YPITI---GFFGIAVSSFICILIVEKNQ 390 (398) Q Consensus 327 ~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~ 390 (398) T Consensus 377 va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq 446 (459) T KOG4686 377 VASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQ 446 (459) T ss_pred HHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC T ss_conf 4663778770406889999985115587554412666888604699999999999999988885200323 |
|
| >TIGR00902 2A0127 MFS transporter, phenyl propionate permease (PPP) family; InterPro: IPR005276 This family of proteins is involved in the uptake of 3-phenylpropionic acid | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-14 Score=94.54 Aligned_cols=355 Identities=14% Similarity=0.147 Sum_probs=225.9 Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-----HHHHHHHHCCC Q ss_conf 8657669999999999819998899999999999999999999999986508289999999999-----99999851001 Q gi|254780967|r 15 SLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIH-----IISTFIMVTIN 89 (398) Q Consensus 15 ~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~-----~i~~~~~~~a~ 89 (398) T Consensus 17 y~~YG~FLPF~~~WLK~~~~~~E~IGL~~G~~~-~~RF~G~Ll~~~~~~~~~~---~I~ALR~LAL~~~~~~~A~~~~AH 92 (388) T TIGR00902 17 YFAYGVFLPFFSVWLKSIQLTEETIGLLLGAAL-VARFLGSLLIASLVKDASR---LIIALRLLALLSLLIAVAFSLVAH 92 (388) T ss_pred HHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 987400211256675246766379999999999-9998768887442044478---999999999999999999999999 Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 10111002232100111111100012332100011112212233100011111111112222111111014567888887 Q gi|254780967|r 90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT 169 (398) Q Consensus 90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~ 169 (398) T Consensus 93 ~~WLll~~IGly~~~~S~~~P~~D~LA~TW--Q~Q~~LDYGKVRL~GS~AF~~G~~~~G~l~~-~~~~~~I~~~LT~~-- 167 (388) T TIGR00902 93 VAWLLLVAIGLYALVFSALVPLTDALASTW--QKQIGLDYGKVRLIGSVAFVLGVVLFGKLVT-MVDERVILALLTLL-- 167 (388) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHH-- T ss_conf 999999999988876316785245566535--5533876433446677999988888621353-33147999999999-- Q ss_pred HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH Q ss_conf 77788876167886402210111111233310000000002567778876310014688876545543153110158899 Q gi|254780967|r 170 FITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFA 249 (398) Q Consensus 170 ~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398) T Consensus 168 ~~~~~~~~L~~PTI~P~~~~~~~~~~~~~~~~AL~~nP~~~R~l~~V~L~QG~HAAYY~yS~IYW~~~G~S~S~~~~LW~ 247 (388) T TIGR00902 168 LAFYLLIFLLKPTIQPKDEIREDEVTNDVAFLALLKNPQTLRVLIAVGLLQGAHAAYYVYSAIYWTAIGISVSAVSLLWS 247 (388) T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999846899998777630001136666535366058899999887424799999999999998477888989998 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHH Q ss_conf 886576778899999850015651246887788899999999873257776403799899899999999-9999999998 Q gi|254780967|r 250 VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGL-INSNFSSISM 328 (398) Q Consensus 250 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 328 (398) T Consensus 248 ~GV~AE~~~F~lS~~LF~~~S~~~lL~ISA~---~~V~RW~~~G~~~----~l~~~~~~Q~lH~~Ty~VCH~A~~RYI~~ 320 (388) T TIGR00902 248 LGVLAEVVLFALSRKLFRRISIRVLLLISAL---AGVVRWAVIGAIE----DLPLLILLQLLHSLTYAVCHLAIVRYIAA 320 (388) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 7999999999998889876339999999998---8888888887888----88999999999865899999999998743 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 5346676999999999999999-999999999983117999999999999999999999422 Q gi|254780967|r 329 EPFSHLAGTASSIFGFINTVIS-TILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKN 389 (398) Q Consensus 329 ~~~~~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (398) T Consensus 321 ~~~S~~~-~LQ~~Y~~~~~G~~IAI~T~~AG~~Y~~~~~~---~F~~M~~~A~~A~F~~P~~ 378 (388) T TIGR00902 321 RQQSEVI-KLQALYSALANGVLIAIFTVIAGFLYQYLGAG---VFVVMALVALAAFFLIPKK 378 (388) T ss_pred CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHCCCCC T ss_conf 8873114-78889988850079999999998873005634---7789999998886404541 |
This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. . |
| >TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.3e-14 Score=92.62 Aligned_cols=351 Identities=14% Similarity=0.147 Sum_probs=204.3 Q ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH---HHHHHHC Q ss_conf 9988657669999999-99981999889999999999999999999999998650828999999999999---9998510 Q gi|254780967|r 12 AINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII---STFIMVT 87 (398) Q Consensus 12 ~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i---~~~~~~~ 87 (398) T Consensus 12 FlyFfim~~~fpf~piWL~~~~gl~kt~tG-i~fs~~sl~si~Fqp~~G~~sDkLGLkK~LlW~is~lLvlfaPFfiyVf 90 (397) T TIGR00882 12 FLYFFIMSAYFPFFPIWLKDVNGLTKTETG-IVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISLLLVLFAPFFIYVF 90 (397) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999998853347788422547776357-7888899999987666400201235506899999999998615998986 Q ss_pred CC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHH Q ss_conf 01----1011-100223210011111110001233210001111221223310001111111111222211111101456 Q gi|254780967|r 88 IN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFV 162 (398) Q Consensus 88 a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~ 162 (398) T Consensus 91 ~PLL~~Ni~~G~l~Gg~y~G~~f~AG~Ga~eayiEkvsR~~~--FEYG~aR~fGc~GwAlcA~~~GIlF~i--~p~~~FW 166 (397) T TIGR00882 91 APLLQSNILVGALVGGLYLGFVFSAGAGAIEAYIEKVSRNSN--FEYGKARMFGCVGWALCASIAGILFSI--DPSIVFW 166 (397) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC--CCCCEEEEEEECHHHHHHHHCCEEEEC--CCCHHHH T ss_conf 779998999999986999877873257346888978752479--840017888721378776530300300--6641457 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHH----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHH Q ss_conf 78888877778887616788640221----01111112333100000000025677788763100146888-76545543 Q gi|254780967|r 163 CMGVITTFITLWYYIRFPETLDPRDV----RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS-SQQIYVGI 237 (398) Q Consensus 163 ~~~~~~~~~~~~~~~~~pet~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (398) T Consensus 167 l~S~~a~~l~~ll~~~k~~~~~~A~V~~a~gAn~~~~~~~~~~~lFr~r~~W~f~lyvvGv~~~YdvFDQQlFa~Ff~~f 246 (397) T TIGR00882 167 LGSGFALILMLLLMVAKPKSSDSAEVANALGANASAISLKDALELFRQRRLWVFVLYVVGVACVYDVFDQQLFAVFFKGF 246 (397) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHH T ss_conf 88999999999997616998726899998733800016789999717998657888666100023101210037786554 Q ss_pred CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 1531----101588998865767788999998500156512468877888999999998732577764037998998999 Q gi|254780967|r 238 YQLG----NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS 313 (398) Q Consensus 238 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398) T Consensus 247 F~~~~~Gtr~fGy~tt~ge~lnA~iMf~~P~iiNRiG~KNaLLiag~IM~~RI~gssf~~-------~~~ev~~lK~LH~ 319 (397) T TIGR00882 247 FATPQQGTRVFGYVTTAGELLNALIMFCAPLIINRIGAKNALLIAGLIMAVRILGSSFAT-------TAVEVVILKMLHA 319 (397) T ss_pred HCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH T ss_conf 057677627665301288999999998703776166715899999999999999888776-------6999999999888 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999999998534667-699999999--99999999999999999831179999999999 Q gi|254780967|r 314 FQFGLINSNFSSISMEPFSHL-AGTASSIFG--FINTVISTILGIIIGQSFNGTTYPITIGFFGI 375 (398) Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~-~G~a~~l~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 375 (398) T Consensus 320 ~EvPfllvg~FKYi~~~F~~rLSaTiy-LiGF~~~kqla~i~LS~~~G~lyd~~Gfq~~yl~lg~ 383 (397) T TIGR00882 320 LEVPFLLVGAFKYITSVFDKRLSATIY-LIGFQFAKQLAAILLSTFAGNLYDRIGFQTAYLVLGC 383 (397) T ss_pred HHHHHHHHHHHHHEECCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 762689864554111111552256788-9999998888899999877767630244799999999 |
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane. |
| >TIGR00903 2A0129 major facilitator 4 family protein; InterPro: IPR005277 The MFS is a very old, large and diverse superfamily that includes several hundred sequenced members | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.2e-14 Score=93.76 Aligned_cols=353 Identities=15% Similarity=0.209 Sum_probs=205.1 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHCCCC Q ss_conf 699999999998199988999999999999999999999999865082899999999999999985100-1101110022 Q gi|254780967|r 20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-NSFTGMLCMR 98 (398) Q Consensus 20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-~~~~~l~~~r 98 (398) T Consensus 9 TySPV~~LV~E~~~VS~E~~GLLA~-~YP~~FL~LTIPSG~LLDR~F~~-Wl~~G~~~T~~A~~~RL~~Pl~Y~WLL~CQ 86 (368) T TIGR00903 9 TYSPVLSLVAEDLDVSKELLGLLAV-VYPIAFLILTIPSGLLLDRDFKR-WLLVGVLLTFAAAVLRLLDPLSYEWLLVCQ 86 (368) T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH T ss_conf 2100357765223443888989999-99999999860422443266768-999999999988998730500078999999 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 32100111111100012332100011112212233100011111111112222111111014567888887777888761 Q gi|254780967|r 99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR 178 (398) Q Consensus 99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~ 178 (398) T Consensus 87 ~~~ALGQPlLLN~F~P~AS~~~-~ERR~~V~S~LSl~MYLG~~yAL~~G-~~~YT~~GL~~L~~P~A~V~~A~~~L~~~~ 164 (368) T TIGR00903 87 LLAALGQPLLLNAFVPAASTLR-EERRDLVVSLLSLAMYLGIVYALAAG-LKLYTALGLTLLILPIAVVAAASVVLVLIA 164 (368) T ss_pred HHHHHCCHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9986154157762123001335-13578999999999999999998757-999998558999878999988899999986 Q ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH Q ss_conf 67886402210111111233310000000002567778876310014688876545543153110158899886576778 Q gi|254780967|r 179 FPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIA 258 (398) Q Consensus 179 ~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398) T Consensus 165 ~~A-~~~~~~~~lGfkd~V~~F~~~~~R~DLW~~G~ILGlGVA~FDNl~~WL~~A-L~~~GL~~~AG~~VALA~~~GL~G 242 (368) T TIGR00903 165 LRA-LRFTKAESLGFKDVVKEFRLLLKRKDLWLLGLILGLGVALFDNLAIWLEAA-LRSKGLEDVAGDAVALALLLGLVG 242 (368) T ss_pred HHC-CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 311-110012346458899987886403238989899976899987899998762-071461121024999999982401 Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-H Q ss_conf 89999985001565124688778889999999987325777640379989989999999999999999985----346-6 Q gi|254780967|r 259 SFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME----PFS-H 333 (398) Q Consensus 259 ~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~ 333 (398) T Consensus 243 VAVIP~RV~R~~LR~~Y~R~~--~~L~A~ly~~LAl~~~----~~~~~~l~~~~G----L~MLPAY~~IM~WI~~y~D~~ 312 (368) T TIGR00903 243 VAVIPDRVVRVNLRSIYIRAI--ALLVAVLYLILALELS----RLLLFALLGLAG----LLMLPAYAVIMDWISKYYDKR 312 (368) T ss_pred EEECCCCEEEHHHHHHHHHHH--HHHHHHHHHHHHHHHH----HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCC T ss_conf 314487303300689999999--9999999999998888----999999875778----886115889998764540642 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 76999999999999999999999999983117999999999999999999999422 Q gi|254780967|r 334 LAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKN 389 (398) Q Consensus 334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (398) T Consensus 313 ~~G~A~G~~Gl~SR~~~V~L~~~A~~F~S-S~~~YFTyL~~~~T~AF~~~LLLP~D 367 (368) T TIGR00903 313 LQGKAAGAVGLVSRILSVALALAATLFLS-SAELYFTYLAVLITVAFILALLLPSD 367 (368) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 04430215888999999999999999853-48899999999999999999708899 |
They catalyze uniport, solute:cation (H+ or Na+) symport and/or solute:H+ or solute:solute antiport. Most are of 400-600 amino acyl residues in length and possess either 12 or 14 putative transmembrane a-helical spanners. They exhibit specificity for sugars, polyols, drugs, neurotransmitters, Krebs cycle metabolites, phosphorylated glycolytic intermediates, amino acids, peptides, osmolites, nucleosides, organic anions, inorganic anions, etc. They are found ubiquitously in all three kingdoms of living organisms. The generalized transport reactions catalyzed by MFS porters are: (1)Uniport: S (out) S (in). (2)Symport: S (out) + [H+ or Na+] (out) ---> S (in) + [H+ or Na+] (in). (3)Antiport: S1 (out) + S2 (in) S1 (in) + S2 (out), (S1 may be H+ or a solute) This family of proteins are uncharacterised proteins from archaea, which may be major facilitators. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. . |
| >TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-12 Score=85.14 Aligned_cols=384 Identities=14% Similarity=0.215 Sum_probs=208.8 Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHH Q ss_conf 99999999988-65766999999999981999889999999999999999999999998650-82899999999999999 Q gi|254780967|r 5 IVIAMLMAINS-LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIIST 82 (398) Q Consensus 5 ~~l~~~~~~~~-~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~ 82 (398) T Consensus 5 ~~L~~msFl~~fiWGsWlvtLg~y~~~tl~F~ga~iG-~vYss~gIAAi~~P~l~GiiaDkwlsA~~vya~~~~~gA~~l 83 (435) T TIGR00889 5 LKLKVMSFLQYFIWGSWLVTLGSYLSKTLKFSGAEIG-AVYSSTGIAAILMPILLGIIADKWLSAQKVYAVCHLVGALLL 83 (435) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 4567999999998766898778998661344554203-778877899997278999884156519999999999999999 Q ss_pred HHHHCCCCHHHHCCCCCCCCCC----CCCCCCCCHHHHH----HHHCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCC Q ss_conf 9851001101110022321001----1111110001233----21000111122122---33100011111111112222 Q gi|254780967|r 83 FIMVTINSFTGMLCMRLIQGIG----GAAPRIITISIIR----DIYDGRDMAKVLSI---AMMIFMIMPILAPSIGQATV 151 (398) Q Consensus 83 ~~~~~a~~~~~l~~~r~l~G~g----~~~~~~~~~a~i~----~~~~~~~~~~~~~~---~~~~~~~g~~igp~ig~~l~ 151 (398) T Consensus 84 f~AAq~Ttp~~~F~v~L~ns~ayMPTiaL~Nsisy~~l~~AGlD~~~dFPpIRv~GTiGfI~am~avs--llPqiLGY-a 160 (435) T TIGR00889 84 FFAAQVTTPAGMFLVLLVNSLAYMPTIALTNSISYANLPNAGLDVVTDFPPIRVMGTIGFIVAMWAVS--LLPQILGY-A 160 (435) T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH--HHHHHHHC-C T ss_conf 88515688867899999999775147888999999855424885413788706850278999999997--52566301-4 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH- Q ss_conf 1111110145678888877778887616788640221011111123-33100000000025677788763100146888- Q gi|254780967|r 152 ALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAIL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNS- 229 (398) Q Consensus 152 ~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (398) T Consensus 161 ~~els-~~qLyI~ag~SalL~~fa-l~LP~iPVak~~a~~s~~~~LGLDAf~Lfknkr~~iFF~f-s~llga~L~i~n~F 237 (435) T TIGR00889 161 DLELS-NLQLYITAGSSALLGVFA-LTLPDIPVAKKKAKMSLKVLLGLDAFILFKNKRMAIFFLF-SMLLGAELQITNIF 237 (435) T ss_pred CCCCC-CHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHC T ss_conf 77713-037899999999999999-8478989851003411788876789887508854678999-99975688876530 Q ss_pred HHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCC Q ss_conf 765455431531--------101588998865767788999998500156512468877888999999998732-57776 Q gi|254780967|r 230 SQQIYVGIYQLG--------NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQIT-SNHPI 300 (398) Q Consensus 230 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 300 (398) T Consensus 238 gN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfg---fF~YGsdp~~f 314 (435) T TIGR00889 238 GNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFG---FFAYGSDPEYF 314 (435) T ss_pred CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HEEECCCCCHH T ss_conf 452101125788620112321328877488999999998522553134478999999999999876---50307898548 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----H-------HHH Q ss_conf 40379989989999999999999999-9853466769999999999999999999999999-83-----1-------179 Q gi|254780967|r 301 HLLIFIAFFFLASFQFGLINSNFSSI-SMEPFSHLAGTASSIFGFINTVISTILGIIIGQS-FN-----G-------TTY 366 (398) Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~-~~-----~-------~~~ 366 (398) T Consensus 315 g~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW 394 (435) T TIGR00889 315 GYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDW 394 (435) T ss_pred HHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC T ss_conf 99999999999865441034457899600278666678889999997017777754456366643312787445414055 Q ss_pred HHHHH-HHHH-HHHHHHHHHHHHCCHH---HHHHHCC Q ss_conf 99999-9999-9999999999942200---0343069 Q gi|254780967|r 367 PITIG-FFGI-AVSSFICILIVEKNQM---FRKTELR 398 (398) Q Consensus 367 ~~~~~-~~~~-~~~~~~~~~~~~~~~~---~r~~~~r 398 (398) T Consensus 395 ~t~Wl~fAgy~~~lAv~Fm~~Fky~~~eit~~k~~~r 431 (435) T TIGR00889 395 QTVWLVFAGYIVILAVLFMIFFKYSHNEITAIKVDDR 431 (435) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 1367899999999999998763025664000235764 |
The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane. |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family; InterPro: IPR014090 RhtX from Sinorhizobium meliloti 1021 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family for import of siderophores as a means to import iron | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.7e-11 Score=77.43 Aligned_cols=370 Identities=15% Similarity=0.100 Sum_probs=190.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHH Q ss_conf 89999999999886576699999999998199988999999999999999999999999865------082899999999 Q gi|254780967|r 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR------FGRKIVMMFGLV 76 (398) Q Consensus 3 ~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr------~Grr~~l~~g~~ 76 (398) T Consensus 2 L~~~l~~LYL~QGIP~~l~~~AlP~LlR~~GA~~~Ala--~l~L~~LP~-V~KF~~AP~VD~~~~~~GlG~RR~W~~P~Q 78 (391) T TIGR02718 2 LVITLGLLYLSQGIPIGLALDALPTLLREDGAPLTALA--LLPLVGLPL-VVKFLWAPLVDNRWSARGLGRRRSWVLPMQ 78 (391) T ss_pred EEEEEHHHHHHCCHHHHHHHHHHCHHHHCCCCHHHHHH--HHHHHHHHH-HHHHHHCCHHHCCCCCCCCCCCCCHHHHHH T ss_conf 02200477774002799999830245300687157999--877875589-999986231302367887886530121489 Q ss_pred H---HHHHHHH---HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC Q ss_conf 9---9999998---510011011100223210011111110001233210001111221223310001111111111222 Q gi|254780967|r 77 I---HIISTFI---MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT 150 (398) Q Consensus 77 ~---~~i~~~~---~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l 150 (398) T Consensus 79 ~~V~~~l~slA~~~~~~A~~~~AvG-LL~~~~L~Sa~QDIA~DG~A~~H~~G~~LA~~NAvQ~a~v~~G~~~GG~~-~L~ 156 (391) T TIGR02718 79 LLVVACLASLALVGLDVAGAGWAVG-LLAVASLASATQDIATDGMAAEHLNGRTLAKVNAVQIAGVMIGFFGGGAG-TLV 156 (391) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH-HHH T ss_conf 9999998888740222016889999-99999997546545335414352057446788888885578644200589-999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH- Q ss_conf 2111111014567888887777888761678864022101111112333100000000025677788763100146888- Q gi|254780967|r 151 VALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS- 229 (398) Q Consensus 151 ~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (398) T Consensus 157 L~~~~G~R~~~L~~Ac~~L~~L~~~l~l-~~r---~~~~~~ap~~~~ASL~~F~rRP~a~~l-LAlAL~~~~~~~~~~Gl 231 (391) T TIGR02718 157 LIGKFGQRPAFLLLACVPLASLVCVLWL-KDR---AVASPEAPLARRASLLRFLRRPLALSL-LALALLSAMTAVSGFGL 231 (391) T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHH-CCC---CCCCCCCCHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHCCC T ss_conf 9864151599999999879999999870-577---767788742465568887525645899-99999998775541141 Q ss_pred HHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHH Q ss_conf 7654554315311015889-98865767788999998500156512468877888999999998732577-764037998 Q gi|254780967|r 230 SQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-PIHLLIFIA 307 (398) Q Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 307 (398) T Consensus 232 ~~~yL~Da~~~~~~IG~l~~a~~~~~~~LG~~~~A~lvR~~GL~~~~~l~~~l~G--~~alL~f~~~~~wl~~~~~~a~~ 309 (391) T TIGR02718 232 SKLYLVDAGWPLEAIGRLGMAGGLVTVLLGCGGGALLVRRLGLWRTLILGVGLAG--SLALLWFAQAAFWLAPGIAVAWS 309 (391) T ss_pred HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCCHHHHHHHH T ss_conf 0223400243277631021158999999976799999999989999999989888--99999999836651036799999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99899999999999999999853--4667699999999999999999999999998311799999999999999999999 Q gi|254780967|r 308 FFFLASFQFGLINSNFSSISMEP--FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILI 385 (398) Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (398) T Consensus 310 ~~~~~~L~~~~~~VaI~~~~M~~a~dGdQaGTD~T~~~~~~~~~~lia~S~~~~~~~~~GY--a~~F~~~~vlavLa~~l 387 (391) T TIGR02718 310 CSVLGSLITGITSVAILTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSILVYLTDRVGY--AGGFLSGTVLAVLAILL 387 (391) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH T ss_conf 9999999989999999999986215888985127788868999999999999999975222--56788999999999999 Q ss_pred H Q ss_conf 9 Q gi|254780967|r 386 V 386 (398) Q Consensus 386 ~ 386 (398) T Consensus 388 a 388 (391) T TIGR02718 388 A 388 (391) T ss_pred H T ss_conf 8 |
This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.. |
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=278.30 Aligned_cols=353 Identities=16% Similarity=0.184 Sum_probs=241.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 99988657669999999999819998899999999999999999999999986508289999999999999998510011 Q gi|254780967|r 11 MAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINS 90 (398) Q Consensus 11 ~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~ 90 (398) T Consensus 27 ~~~d~yD~~~~~~~~~~i~~~~~ls~~~~~-~~~s~~~~g~~iGa~i~G~laDr~GRk~~l~~sil~~~i~t~l~~~a~~ 105 (426) T PRK12307 27 YVFDGFDFMLIFYIMYLIKADLGLTDMEGA-FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG 105 (426) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 999999999999999999865599888999-9999999999999999999999755399999999999999999986231 Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 01110022321001111111000123321000111122122331000111111111122221111110145678888877 Q gi|254780967|r 91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTF 170 (398) Q Consensus 91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~ 170 (398) T Consensus 106 ~~~l~i~R~l~Gig~Gg~~~~a~~~~~E~~p~~~Rg~~~~~~~~g~~~G~~la~~l~~~~-~~~~GWR~~F~i-g~lp~l 183 (426) T PRK12307 106 VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF-AEAYGWRAAFFV-GLLPVL 183 (426) T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHH-HHHHHH T ss_conf 999999999998013445668999999867412219999999998699999999999998-557784999999-999999 Q ss_pred HHHHHHHHCCCCCCHHHHCCCCCCC--------CCCCCCCCCCCCHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHCC Q ss_conf 7788876167886402210111111--------2333100000000025677---7887631001468887654554315 Q gi|254780967|r 171 ITLWYYIRFPETLDPRDVRPLNLYA--------ILHSFSLIFKHRASTLYNI---ANSLTMGAILGFVNSSQQIYVGIYQ 239 (398) Q Consensus 171 ~~~~~~~~~pet~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398) T Consensus 184 l~~~~r~~lpESp~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~g~ 263 (426) T PRK12307 184 LVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGF 263 (426) T ss_pred HHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999982899877898664442322330266643569999887699999999999999999999999999999998699 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 31101588998865767788999998500156512468877888999999998732577764037998998999999999 Q gi|254780967|r 240 LGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI 319 (398) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (398) T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~DriGRr~~~~~~~i~~~i~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~g-~ 338 (426) T PRK12307 264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR--IP-QDN-YLLLGACLFGLMATNVG-V 338 (426) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--HH-HHH-HHHHHHHHHHHHHHHHH-H T ss_conf 8999999999999999999999999999987699999999999999999999--97-138-99999999999999999-9 Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999985346-676999999999999999999999999983117999999 Q gi|254780967|r 320 NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG 371 (398) Q Consensus 320 ~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 371 (398) T Consensus 339 ~~~~~~~~~ElfPt~vR~tg~G~~~~~grigg~~~P~i~~~L~~~~G~~~a~~ 391 (426) T PRK12307 339 GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426) T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH T ss_conf 99999999984989899999999999999999999999999998879458999 |
|
| >TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638 This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=278.69 Aligned_cols=354 Identities=19% Similarity=0.248 Sum_probs=287.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999999988657669999999999819998899999999999999999999999986508289999999999999998 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 5 ~~l~~g~FMa~LD~Tiv~va~p~~~~~lg~s~~~~~-Wv~TsY~~A~a~~IPl~gwLa~R~G~r~lFl~~~~~Ft~~S~~ 83 (501) T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTLAGDLGASLSQVQ-WVITSYMLANAIVIPLTGWLAKRFGTRKLFLISTLAFTLGSLL 83 (501) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999877632114410023-2314678889999988999998708447899999999999999 Q ss_pred HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 51001101110022321001111111000123321000111122122331000111111111122221111110145678 Q gi|254780967|r 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM 164 (398) Q Consensus 85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~ 164 (398) T Consensus 84 Cg~A~nl~~lIifR~~QG~~gG~l~Pl~~~~l~~~~PP~~Rg~~~~~~Gl~v~~AP~~GP~LGGwI-~e~~~Wrw~F~~N 162 (501) T TIGR00711 84 CGVANNLELLIIFRVIQGFGGGLLIPLSFSLLLNIYPPEKRGLAMAIWGLTVLVAPALGPTLGGWI-IENYEWRWIFYIN 162 (501) T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHH-HHCCCCHHEEEHH T ss_conf 998520899999999988622048999999999747912158356421066874202353104688-7326222202125 Q ss_pred HHHHHHHHHHHHHHCCCCCCHH-HHCCCCC----------------------CCCCCC---------------------- Q ss_conf 8888777788876167886402-2101111----------------------112333---------------------- Q gi|254780967|r 165 GVITTFITLWYYIRFPETLDPR-DVRPLNL----------------------YAILHS---------------------- 199 (398) Q Consensus 165 ~~~~~~~~~~~~~~~pet~~~~-~~~~~~~----------------------~~~~~~---------------------- 199 (398) T Consensus 163 vPiG~~v~~~a~~~l~~d~~~~~~~~~~D~~G~~L~~~g~~~Ll~~ls~g~~~GW~~~~~il~~~i~~~~~~~~fv~~se 242 (501) T TIGR00711 163 VPIGIIVVVVALFILPEDREKEKASKNLDFLGLLLLSVGLGSLLYVLSEGQEEGWFDSNLILILSIVGLVAIIAFVVRSE 242 (501) T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 78999999999998446666616663112788999999999999875215668899863156999999999999999787 Q ss_pred --------CCCCCCCCHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHH-HHHC Q ss_conf --------1000000000256-777887631001468887654554315311-0158899886576778899999-8500 Q gi|254780967|r 200 --------FSLIFKHRASTLY-NIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSR-LVEK 268 (398) Q Consensus 200 --------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-l~~r 268 (398) T Consensus 243 l~~~nP~~D~~~F~~~~Ft~~f~~~~~~~~~~lyg~~~LLP~~Lq~~~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~~~k 322 (501) T TIGR00711 243 LTDDNPLVDLRLFKYRNFTIGFCVYSLLLGLGLYGAVYLLPLYLQQVLGYTALQAGLHILPVGLAPLLSSPIAGRMLGDK 322 (501) T ss_pred HCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 41468800443402025788999999999999999999999999986279978999999889999999707999998414 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH Q ss_conf 1565124688778889999999987325777640379989-989999999999999999985346-67699999999999 Q gi|254780967|r 269 FGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFIN 346 (398) Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~ 346 (398) T Consensus 323 ~~~R~l~~ig~~~~a~~~y---~~~~~~~~~~~f~~~~~~G~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R 399 (501) T TIGR00711 323 IDPRLLVTIGLILYAVGFY---LRAFTLTPDTDFLAIALPGQFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLR 399 (501) T ss_pred CCHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 6806899999999999998---8852215578618888677999999999999875577761252357622689999999 Q ss_pred HHHHHHHHHHHHHHHHH Q ss_conf 99999999999999831 Q gi|254780967|r 347 TVISTILGIIIGQSFNG 363 (398) Q Consensus 347 ~~~~~~~~~~~g~~~~~ 363 (398) T Consensus 400 ~~gGSiGTal~t~~~~n 416 (501) T TIGR00711 400 QLGGSIGTALITTILTN 416 (501) T ss_pred HHHHHHHHHHHHHHHHH T ss_conf 98889999999999986 |
Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane. |
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=271.78 Aligned_cols=358 Identities=15% Similarity=0.178 Sum_probs=243.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999999988657669999999999819998899999999999999999999999986508289999999999999998 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 16 ~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g-~~~s~~~~g~~iGa~~~G~laDr~GRr~~~~~~~~~~~~~~~~ 94 (486) T PRK03893 16 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAA-SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSAGTLA 94 (486) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999988597988999-9999999999999999999999845699999999999999999 Q ss_pred HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 51001101110022321001111111000123321000111122122331000111111111122221111110145678 Q gi|254780967|r 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM 164 (398) Q Consensus 85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~ 164 (398) T Consensus 95 ~a~a~~~~~l~~~R~l~G~g~Gg~~~~~~~~~~E~~P~~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~-~~gWR~~f~i- 172 (486) T PRK03893 95 CGFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLAAQVYSLVVP-VWGWRALFFI- 172 (486) T ss_pred HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHH- T ss_conf 99828899999999997422612024899999987756047999999999999999999999999811-5356999999- Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHCCCC--CCCC--------CCC------------CCCCCC-----C----------- Q ss_conf 8888777788876167886402210111--1112--------333------------100000-----0----------- Q gi|254780967|r 165 GVITTFITLWYYIRFPETLDPRDVRPLN--LYAI--------LHS------------FSLIFK-----H----------- 206 (398) Q Consensus 165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~--~~~~--------~~~------------~~~~~~-----~----------- 206 (398) T Consensus 173 G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486) T PRK03893 173 GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCA 252 (486) T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH T ss_conf 99999999999980999878998765231577899998513442102455320003566652022342046888999888 Q ss_pred -----------CHHHHHHHHHHHHHHC--C--HHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf -----------0002567778876310--0--14688876545543153110-158899886576778899999850015 Q gi|254780967|r 207 -----------RASTLYNIANSLTMGA--I--LGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFG 270 (398) Q Consensus 207 -----------~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~ 270 (398) T Consensus 253 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~fl~~w~~~~~lPt~L~~~~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriG 332 (486) T PRK03893 253 AIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLG 332 (486) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999998731357899999999999999999889999999999751888889999999999999999999999998948 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 65124688778889999999987325777640379989989999999999999999985346-67699999999999999 Q gi|254780967|r 271 IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVI 349 (398) Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~ 349 (398) T Consensus 333 rr~~~~~~~l~~~~~~~~l--~~~---~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG 407 (486) T PRK03893 333 TRKAYVCSLLISQLLIIPV--FAI---GGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 407 (486) T ss_pred CHHHHHHHHHHHHHHHHHH--HHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 5899999999999999999--997---56469999999999999999999999999887488969889999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999998311799999 Q gi|254780967|r 350 STILGIIIGQSFNGTTYPITI 370 (398) Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~~ 370 (398) T Consensus 408 ~ii~P~i~g~L~~~~~lg~~~ 428 (486) T PRK03893 408 GALAPILGALIAQRLGLGTAL 428 (486) T ss_pred HHHHHHHHHHHHHCCCCHHHH T ss_conf 999999999998708951899 |
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=267.77 Aligned_cols=339 Identities=18% Similarity=0.258 Sum_probs=259.8 Q ss_pred HHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH Q ss_conf 657669--999999999819998899999999999999999999999986508289999999999999998510011011 Q gi|254780967|r 16 LGIDII--LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTG 93 (398) Q Consensus 16 ~~~~~~--~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~ 93 (398) T Consensus 25 igttEfv~~gLLp~iA~dl~vs~~~aG~-lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~ 103 (394) T COG2814 25 IGTTEFVPVGLLPPIAADLGVSEGAAGQ-LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAV 103 (394) T ss_pred HHHHHHHHHHCHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 8847886882228899883998889999-999999999998899999871335389999999999999899999531999 Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 10022321001111111000123321000111122122331000111111111122221111110145678888877778 Q gi|254780967|r 94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITL 173 (398) Q Consensus 94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~ 173 (398) T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt-~ig~~~GWR~~F~~ia~l~ll~~~ 182 (394) T COG2814 104 LLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGT-FLGQLFGWRATFLAIAVLALLALL 182 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999998889999999999998759521245999999779999998512899-999886389999999999999999 Q ss_pred HHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHH Q ss_conf 887616788640221011111123331000000000256777887631001468887654554315311-0158899886 Q gi|254780967|r 174 WYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGG 252 (398) Q Consensus 174 ~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 252 (398) T Consensus 183 ~~~~~lP---~~--~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~G 257 (394) T COG2814 183 LLWKLLP---PS--EISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFG 257 (394) T ss_pred HHHHHCC---CC--CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH T ss_conf 9999699---96--677877764467998966845899999999998162444895799998735998768899999998 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 57677889999985001565124688778889999999987325777640379989989999999999999999985346 Q gi|254780967|r 253 FAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS 332 (398) Q Consensus 253 ~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398) T Consensus 258 v~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~---~~l~l~~~~~~---~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p 330 (394) T COG2814 258 IAGFIGNLLGGRLADR-GPRRALIAALLLLAL---ALLALTFTGAS---PALALALLFLWGFAFSPALQGLQTRLARLAP 330 (394) T ss_pred HHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHH---HHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 9999987777640202-106699999999999---99999983111---9999999999999863015678887502477 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 676999999999999999999999999983117999 Q gi|254780967|r 333 HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI 368 (398) Q Consensus 333 ~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 368 (398) T Consensus 331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~ 366 (394) T COG2814 331 DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA 366 (394) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH T ss_conf 743799999999999999999999899998103577 |
|
| >TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=268.73 Aligned_cols=349 Identities=19% Similarity=0.250 Sum_probs=252.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH Q ss_conf 999999999988657669999999999819998899999999999999999999999986508-----289999999999 Q gi|254780967|r 4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-----RKIVMMFGLVIH 78 (398) Q Consensus 4 i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-----rr~~l~~g~~~~ 78 (398) T Consensus 19 ~~~~~l~~l~DG~Dl~~~gf~ap~l~~~w~l~~~~~G-~l~S~gL~G~~~Gal~~G~~aDr~GhlGvsR~r~l~~~~llF 97 (413) T TIGR00895 19 IILSFLIMLVDGLDLAALGFAAPALSAEWGLDPVQLG-FLLSAGLIGMAFGALFFGPLADRIGHLGVSRKRVLLWSILLF 97 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH T ss_conf 9999999996259999999997688888588914100-789999999998799998787865035413999999999999 Q ss_pred HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999851001101110022321001111111000123321000111122122331000111111111122221111110 Q gi|254780967|r 79 IISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI 158 (398) Q Consensus 79 ~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr 158 (398) T Consensus 98 ~~ft~~~a~A~~~~qL~~~R~~AGlGlGg~~pn~~aL~sEY~p~r~R~~~vg~~~~Gy~~G~~~gg~l~~~LiP-~~GWr 176 (413) T TIGR00895 98 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLIALVSEYAPKRFRGTAVGLMFCGYAIGAAVGGFLAGWLIP-AFGWR 176 (413) T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH T ss_conf 99999988740479999999998554999999999999843576334668888887678999999999888754-44079 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCH--------HH-------------HCC-----------CCCCCCCCCCCC-CCC Q ss_conf 145678888877778887616788640--------22-------------101-----------111112333100-000 Q gi|254780967|r 159 GIFVCMGVITTFITLWYYIRFPETLDP--------RD-------------VRP-----------LNLYAILHSFSL-IFK 205 (398) Q Consensus 159 ~~f~~~~~~~~~~~~~~~~~~pet~~~--------~~-------------~~~-----------~~~~~~~~~~~~-~~~ 205 (398) T Consensus 177 ~~F~vGG~~Pl~ll~~l~~~LPES~~fl~~kg~~~~~~~~~~n~I~p~~~~~~~~Rfvl~~~~~~~~~~~~~~~~~~lF~ 256 (413) T TIGR00895 177 SLFYVGGIIPLLLLLLLMRFLPESIDFLVEKGKRPEKVRRIVNAIAPQLQAEAQSRFVLALPEQKSAQKTKRSVVKLLFQ 256 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH T ss_conf 99999999999999999977687689897708875799999877545422576542577633541001357899998733 Q ss_pred CC---HHHHHHHHHH-HHHHCCHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH Q ss_conf 00---0025677788-76310014688876-5455431531101588998865767788999998500156512468877 Q gi|254780967|r 206 HR---ASTLYNIANS-LTMGAILGFVNSSQ-QIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLL 280 (398) Q Consensus 206 ~~---~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 280 (398) T Consensus 257 ~~~~~~T~~LW~~y~G~~~~~~Y~l~~WlP~~L~~~~G~~~~~~~~~~~~~~~Gg~~G~~~~g~l~Drl~~~~~~~~~~l 336 (413) T TIGR00895 257 GKTAKITVLLWLLYFGMLLVGVYFLTNWLPSKLMVELGFSLSKAAIVGALFNFGGVIGSIIFGWLADRLGPRFVTALLLL 336 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 46875779999999999999999999611345665348677789999999999899999999999999376199999999 Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 888999999998732-5777640379989989999999999999999985346-67699999999999999999999999 Q gi|254780967|r 281 IFFMITGSWLLVQIT-SNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIG 358 (398) Q Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g 358 (398) T Consensus 337 ~~av----f~~~~~~~~~~~~~~--~l~~~~~~G~~~~G~~~~~~a~m~~~Yp~~~RaTGvGw~~giGR~Ga~~gP~~~G 410 (413) T TIGR00895 337 LGAV----FAVLVGSSTLFSPTL--LLLLGAIAGLFVNGGQSGLYALMAEFYPTAIRATGVGWAIGIGRLGAIIGPILAG 410 (413) T ss_pred HHHH----HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999----999999864102999--9999999999988588989875251040102146788888756899989999998 Q ss_pred HH Q ss_conf 99 Q gi|254780967|r 359 QS 360 (398) Q Consensus 359 ~~ 360 (398) T Consensus 411 ~L 412 (413) T TIGR00895 411 VL 412 (413) T ss_pred HH T ss_conf 82 |
Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=259.87 Aligned_cols=350 Identities=16% Similarity=0.209 Sum_probs=263.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 899999999998865766999--999999981999889999999999999999999999998650828999999999999 Q gi|254780967|r 3 FVIVIAMLMAINSLGIDIILP--CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398) Q Consensus 3 ~i~~l~~~~~~~~~~~~~~~p--~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398) T Consensus 19 W~av~~La~~~F~~~ttEf~~~GlLp~iA~dl~Vs~~~aG~-lVT~yAl~~ai~aP~l~~lt~r~~Rr~lLl~~l~~f~~ 97 (394) T PRK10213 19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ-SVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 69999999999999989999997439899677999789999-99999999999889999986678838999999999999 Q ss_pred HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH Q ss_conf 99985100110111002232100111111100012332100011112212233100011111111112222111111014 Q gi|254780967|r 81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160 (398) Q Consensus 81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~ 160 (398) T Consensus 98 ~n~l~Ala~~f~~Ll~~R~l~g~~~g~f~~~a~~~a~~lvp~~~~grAiaiv~~G~s~A~v~GvPlgt-~ig~~~GWR~~ 176 (394) T PRK10213 98 SCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGS-FLGELIGWRNV 176 (394) T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHH T ss_conf 99999994879999999999982547899999999999769302236999998899999998210898-88600139999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC Q ss_conf 56788888777788876167886402210111111233310000000002567778876310014688876545543153 Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240 (398) Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398) T Consensus 177 F~~ia~l~~i~~~~~~~~lP~~~~~~~~-------~~~~~~~~l~~~~v~~~l~~~~l~~~g~f~~yTYi~p~l~~~~g~ 249 (394) T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPGEPSH-------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGF 249 (394) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCC-------CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 9999999999999999837778888875-------657899995678999999999999999999899679999984189 Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 1-101588998865767788999998500156512468877888999999998732577764037998998999999999 Q gi|254780967|r 241 G-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI 319 (398) Q Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (398) T Consensus 250 ~~~~is~~L~~fGi~~~~Gn~l~G~l~dr~~~~~l~-~~~~~l~---~~~~~l~~~~~---~~~~~~~~~~lwG~~~~~~ 322 (394) T PRK10213 250 GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALA-GAPLVLA---LSALVLTLWGS---DKIVATGVAIIWGLTFALV 322 (394) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH T ss_conf 864899999999999999999999996310878999-9999999---99999999874---5999999999999999988 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999985346676999999999999999999999999983117999 Q gi|254780967|r 320 NSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI 368 (398) Q Consensus 320 ~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 368 (398) T Consensus 323 ~~~~q~~i~~~a~~a~~~a~al~~safnlgia~Ga~iGG~~l~~~G~~~ 371 (394) T PRK10213 323 PVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS 371 (394) T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH T ss_conf 9999999998786867699999999999999999999999997657137 |
|
| >PRK03699 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=258.24 Aligned_cols=350 Identities=12% Similarity=0.120 Sum_probs=264.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 89999999999886576699999999998199988999999999999999999999999865082899999999999999 Q gi|254780967|r 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST 82 (398) Q Consensus 3 ~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 82 (398) T Consensus 8 l~~~~fl~ff~~G~~~~~~G~~iP~i~~~f~ls~~~~g-~i~s~~~iG~li~~~~~g~L~~k~G~k~~l~~g~~l~~i~~ 86 (394) T PRK03699 8 LTWISFLSYALTAALVIVTGMVMGPIAEYFNLPVSSMS-NTFTFLNAGILISIFLNAWLMEIIPLKRQLRFGFILMVLAV 86 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 99999999999998998699858999999495999999-99999999999999999999999595099999999999999 Q ss_pred HHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHH Q ss_conf 98510011011100223210011111110001233210001111221223310001111111111222211111101456 Q gi|254780967|r 83 FIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFV 162 (398) Q Consensus 83 ~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~ 162 (398) T Consensus 87 l~~~~~~s~~~l~v~~fl~Glg~G~~~~~~~~~i~~~~~~~~r~~~l~~~~~~f~vGa~i~Pli~~~ll~~~~~W~~~y~ 166 (394) T PRK03699 87 AGLMFSHSLALFSIAMFVLGLVSGITMSIGTFLITHVYEGRQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYL 166 (394) T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH T ss_conf 99998152999999999998678999988999999970600788999999999988999999999999856998899999 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC Q ss_conf 78888877778887616788640221011111123331000000000256777887631001468887654554315311 Q gi|254780967|r 163 CMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN 242 (398) Q Consensus 163 ~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (398) T Consensus 167 ~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~-~---~-~~~~~~~~~~i~~f~yv~~e~~~~~W~ptyl~~~~g~~~ 240 (394) T PRK03699 167 CIGLVAVAIFILTLF-SEFPALGKHAPKTEAPVV-K---S-KWNFGVIFLAIAALLYILAQLTFISWVPEYAQKKFGMSL 240 (394) T ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHH-H---H-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH T ss_conf 999999999999998-258732224553323203-4---3-026089999999999999999999999999998279998 Q ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 0-158899886576778899999850015651246887788899999999873257776403799899899999999999 Q gi|254780967|r 243 L-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS 321 (398) Q Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398) T Consensus 241 ~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~l~~~~~~a~----~~~~~~~~~~---~~~~~~~~~~~~Gff~a~iyp 313 (394) T PRK03699 241 EDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRILTVLAGLAL----VLMYLFVTTD---NPAHMAYLILGLGFFSSAIYT 313 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHH T ss_conf 899999999999999999999999988437999999999999----9999999758---689999999999999977889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999853466769999999999999999999999999831179 Q gi|254780967|r 322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTY 366 (398) Q Consensus 322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 366 (398) T Consensus 314 ~~~s~~~~~~~~~~~~~vs~il~~g~~G~~~~P~i~G~i~~~~G~ 358 (394) T PRK03699 314 TIITLGSQQTKVASPKLVNFILTCGTIGTMLSFVVTGPIVAHFGL 358 (394) T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999875555318799999999989999999999999998628 |
|
| >pfam07690 MFS_1 Major Facilitator Superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=261.60 Aligned_cols=337 Identities=21% Similarity=0.344 Sum_probs=250.5 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 999988657669999999-9998199988999999999999999999999999865082899999999999999985100 Q gi|254780967|r 10 LMAINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI 88 (398) Q Consensus 10 ~~~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a 88 (398) T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ig-~~~s~~~~~~~i~~~~~G~l~Dr~g~k~~~i~~~~~~~i~~~~~~~~ 82 (345) T pfam07690 4 AAFLAGLGRSLLGPALPLYLAEDLGISPTEIG-LLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFA 82 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999988398999999-99999999999999999999999096999999999999999999997 Q ss_pred CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 11011100223210011111110001233210001111221223310001111111111222211111101456788888 Q gi|254780967|r 89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT 168 (398) Q Consensus 89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~ 168 (398) T Consensus 83 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ig~~i~~~l~~-~~~~~~~f~~~~~~~ 161 (345) T pfam07690 83 SSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLAS-LFGWRAAFLILAILA 161 (345) T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHH T ss_conf 5799999999998702210008999999840899999999999988602454312489999997-014889999999999 Q ss_pred HHHHHHHHHHCCCCCCHHHHCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHH Q ss_conf 7777888761678864022101111--112333100000000025677788763100146888765455431531-1015 Q gi|254780967|r 169 TFITLWYYIRFPETLDPRDVRPLNL--YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFP 245 (398) Q Consensus 169 ~~~~~~~~~~~pet~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 245 (398) T Consensus 162 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (345) T pfam07690 162 LLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPWKL-LLRDPVLWLLLALLLFGFAFFALFTYLPLY-QEVLGLSALLAG 239 (345) T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHH T ss_conf 999999999948885322234302220120235999-875799999999999999999999999999-998099889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 88998865767788999998500156512468877888999999998732577764037998998999999999999999 Q gi|254780967|r 246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS 325 (398) Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (398) T Consensus 240 ~~~~i~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~i~g~~~~~~~~~~~~ 315 (345) T pfam07690 240 LLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLT----ESSLWLLVALLLLGFGAGLVFPALNA 315 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999073799999999999999999999861----21999999999999999999999999 Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9985346-6769999999999999999999 Q gi|254780967|r 326 ISMEPFS-HLAGTASSIFGFINTVISTILG 354 (398) Q Consensus 326 ~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~ 354 (398) T Consensus 316 ~~~~~~p~~~~g~~~g~~~~~~~ig~~igP 345 (345) T pfam07690 316 LASDLAPKEERGTASGLYNTAGSLGGALGP 345 (345) T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 999878998999999999999999888392 |
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=256.33 Aligned_cols=339 Identities=14% Similarity=0.093 Sum_probs=248.2 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-----CCHHHH Q ss_conf 699999999998199988999999999999999999999999865082899999999999999985100-----110111 Q gi|254780967|r 20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-----NSFTGM 94 (398) Q Consensus 20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-----~~~~~l 94 (398) T Consensus 48 nfs~a~p~l~~elgls~~~lG-~I~Saf~i~Yaigkf~~G~l~Dr~~~R~fl~~gl~ls~i~~~~fG~~~~~~~~s~~~~ 126 (463) T PRK09556 48 NFNIAQNDMIETYGLSMTELG-MIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLM 126 (463) T ss_pred HHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 289767999988398988999-9999999999998754524453157415599999999999999999886368899999 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHH Q ss_conf 0022321001111111000123321000111122122331000111111111122221--11111014567888887777 Q gi|254780967|r 95 LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA--LSGGWIGIFVCMGVITTFIT 172 (398) Q Consensus 95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~--~~~gWr~~f~~~~~~~~~~~ 172 (398) T Consensus 127 ~~l~~lnG~fQ~~GwP~~~~~l~~WF~~~eRG~~~giwn~s~nvG~~l~~~ia~~~~~~~~~~~~~~~Fi~pgii~i~~~ 206 (463) T PRK09556 127 IAFYALSGFFQSTGGPCSYSTITKWTPRRKRGTYLGFWNISHNIGGAGAAGVALFGANYFFDGHVIGMFIFPSIIALIIG 206 (463) T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 99999988784454508999999973931121332477420103788999999999999824329999999999999999 Q ss_pred HHHHHHCCCCCCH------HH-----HCCCC--CCC----CCCC-CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH Q ss_conf 8887616788640------22-----10111--111----2333-10000000002567778876310014688876545 Q gi|254780967|r 173 LWYYIRFPETLDP------RD-----VRPLN--LYA----ILHS-FSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY 234 (398) Q Consensus 173 ~~~~~~~pet~~~------~~-----~~~~~--~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398) T Consensus 207 i~~~~~~~d~Pe~~Gl~~~ee~~~~~~~~~~~~~~~~~~s~~~~~~~~vl~np~vw~lala~~f~y~Vryg~~~WlP~YL 286 (463) T PRK09556 207 FIGLRYGSDSPEEYGLGKAEELFGEEISEEDKETESNDMTKWQIFVEYVLKNKVIWLLCFANIFLYIVRIGIDQWSPVYA 286 (463) T ss_pred HHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999817997775999756551454221111112234545789999997272999999999999999999987649999 Q ss_pred HHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 543153110-1588998865767788999998500156512468877888999999998732577764037998998999 Q gi|254780967|r 235 VGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS 313 (398) Q Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398) T Consensus 287 ~~~~g~s~~~a~~~~~lfevggi~G~ll~G~iSD~~~GRR~~~~~-~~l~~-~~~~l~~y~-~~~--~~~~~~~~l~~iG 361 (463) T PRK09556 287 FQELKFSKEDAIQGFTLFEIGALVGTLLWGWLSDLANGRRALVAC-IALAL-IIFTLGVYQ-HAT--SVYMYLASLFALG 361 (463) T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHH-HHHHHHHHH-HCC--CHHHHHHHHHHHH T ss_conf 971499977876999999999998999898998741586089999-99999-999999998-178--5899999999999 Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH Q ss_conf 9999999999999985346-6769999999999999-9999999999998311 Q gi|254780967|r 314 FQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTV-ISTILGIIIGQSFNGT 364 (398) Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~ 364 (398) T Consensus 362 f~I~GP~~Lig~~a~~~~pk~a~gta~G~~G~f~yl~G~~~a~~~~g~i~d~~ 414 (463) T PRK09556 362 FLVFGPQLLIGVAAVGFVPKKAIGVADGIKGTFAYLIGDSFAKLGLGMIADGT 414 (463) T ss_pred HHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99802999999999985045355454412105898875887877799886145 |
|
| >TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=248.76 Aligned_cols=343 Identities=15% Similarity=0.146 Sum_probs=271.4 Q ss_pred HHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCC------CHH Q ss_conf 9999999-999819998899999999999999999999999986508-28999999999999999851001------101 Q gi|254780967|r 21 ILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-RKIVMMFGLVIHIISTFIMVTIN------SFT 92 (398) Q Consensus 21 ~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~~~~~~a~------~~~ 92 (398) T Consensus 13 ~S~Aa~~Gl~~DLg~~~~~~g-~~~saF~~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~~Fs~~~~~~ 91 (427) T TIGR00893 13 LSFAAPTGLQEDLGLSAAQYG-YVFSAFSIGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAGGFSTVTAYV 91 (427) T ss_pred HHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999998666876088776888-9999999999999666898875211589999999999999999997556544676899 Q ss_pred HHCCCCCCCCCC--CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC------CCHHHHHH Q ss_conf 110022321001--1111110001233210001111221223310001111111111222211111------10145678 Q gi|254780967|r 93 GMLCMRLIQGIG--GAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG------WIGIFVCM 164 (398) Q Consensus 93 ~l~~~r~l~G~g--~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g------Wr~~f~~~ 164 (398) T Consensus 92 ~l~~lR~l~G~aGLEa~~~Pg~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl~~~i~~-~~~~~g~~gW~~~F~~~ 170 (427) T TIGR00893 92 SLYILRVLLGAAGLEAPLFPGIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPLVGWILV-HFSSMGMKGWQWVFIIE 170 (427) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHH T ss_conf 99999999856567777513689987300465575779999999999999999899999998-74466520138999999 Q ss_pred HHHHHHHHHHHHHHCCCCCCHHH---------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC Q ss_conf 88887777888761678864022---------------------101111112333100000000025677788763100 Q gi|254780967|r 165 GVITTFITLWYYIRFPETLDPRD---------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAI 223 (398) Q Consensus 165 ~~~~~~~~~~~~~~~pet~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (398) T Consensus 171 G~~~~~~gv~~~~~~~d~p~~a~~~~~e~~~~~~~~~~~~~~~~~~k~~~~~k~~~~~~~L~~r~~~~~~~~~~~~~~~~ 250 (427) T TIGR00893 171 GILGIILGVLWLKFIKDKPQKAKWLTEEEKYIVVGGLLAEQDDSKGKGPSEPKKYQIKELLKDRRVWGLALGQFLVNILL 250 (427) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH T ss_conf 79999999999986079754766454899987640342000033456787760899999981559989999999999988 Q ss_pred HHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------HHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 1468887654554315311-0158899886576778899999850015651------24688778889999999987325 Q gi|254780967|r 224 LGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRR------VSHYSLLIFFMITGSWLLVQITS 296 (398) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 296 (398) T Consensus 251 ~~f~~W~P~yl~~~~g~~~l~~g~~~~~P~~~g~~G~~L~g~~SD~~~~r~~~fW~~l~~a~~~~~~~~~~~s~~~~~~~ 330 (427) T TIGR00893 251 YFFLTWFPTYLKQERGLSILEAGFLASLPGIVGFVGMVLGGILSDLLLRRGARFWKSLVFARKTAIIAGLVLSLLMFATN 330 (427) T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999998653145899999999999999999999999867887623541356678999999999999999999861 Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH Q ss_conf 7776--40379989989999999999999999985346-67699999999999-9999999999999983117 Q gi|254780967|r 297 NHPI--HLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFIN-TVISTILGIIIGQSFNGTT 365 (398) Q Consensus 297 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~-~~~~~~~~~~~g~~~~~~~ 365 (398) T Consensus 331 ~~~~Gm~~~~~~~~~~l~~fg~~~l~~~~w~~~s~~~~~~~~g~~~G~i~~~GY~~~~i~~P~~~G~~~~~~G 403 (427) T TIGR00893 331 SLVNGMPPWAALALVALAFFGAGLLGAILWAVISDVLPGNIAGLTGGLINSLGYNLGGIVGPIVIGYIAATTG 403 (427) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 0310179999999999999999998876655403105751245688999999998999999999977632666 |
; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849 Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=241.12 Aligned_cols=342 Identities=17% Similarity=0.230 Sum_probs=266.5 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----CHHHHCC Q ss_conf 999999999981999889999999999999999999999998650828999999999999999851001----1011100 Q gi|254780967|r 21 ILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN----SFTGMLC 96 (398) Q Consensus 21 ~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~----~~~~l~~ 96 (398) T Consensus 14 f~~a~P~l~E~~~L~~~dlG-~~~s~~~i~Yg~sK~~~G~~sDr~~~r~fl~~GL~l~a~v~~~~gfs~watS~l~~~~~ 92 (404) T TIGR00881 14 FALAMPYLVEEIGLSKTDLG-LLLSSFSIAYGISKFVMGMVSDRSNPRVFLAIGLILCAIVNIFFGFSTWATSSLWVMAA 92 (404) T ss_pred HHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH T ss_conf 99888998862288875788-99999999998746775665326764899999999999999998852235789999999 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHH Q ss_conf 2232100111111100012332100011112212233100011111111112222111111014--56788888777788 Q gi|254780967|r 97 MRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI--FVCMGVITTFITLW 174 (398) Q Consensus 97 ~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~--f~~~~~~~~~~~~~ 174 (398) T Consensus 93 l~~l~G~fQG~G~P~~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~~~~~w~~~~~~~~~g~~aii~s~~ 172 (404) T TIGR00881 93 LMALNGLFQGMGWPPCGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIALLYSWHVVSSFIVPGIIAIIVSLI 172 (404) T ss_pred HHHHHHHHHHHCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999887750675212402321576531126677888988757899999999999881655688999999999999889 Q ss_pred HHHHCCCCCCH-----------HH----------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH Q ss_conf 87616788640-----------22----------1011111123331000000000256777887631001468887654 Q gi|254780967|r 175 YYIRFPETLDP-----------RD----------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQI 233 (398) Q Consensus 175 ~~~~~pet~~~-----------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398) T Consensus 173 ~~~~~~~~p~~~GL~~~e~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~vl~n~~lW~is~~~~fVy~vr~~~~~W~~~Y 252 (404) T TIGR00881 173 CLLLLRDSPQSVGLPKLEEMPNEEGGGLPEEDKEKKEEELTKKEIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWGPLY 252 (404) T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH T ss_conf 54411577777886975567688886336503344353031577656777416135689999999999999997030566 Q ss_pred HHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCHHH Q ss_conf 5543153110-1588998865767788999998500-----15651246887788899999999873--25777640379 Q gi|254780967|r 234 YVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEK-----FGIRRVSHYSLLIFFMITGSWLLVQI--TSNHPIHLLIF 305 (398) Q Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 305 (398) T Consensus 253 L~~~kg~s~~~~~~~~~~~E~gglvGtll~GW~SDkA~~~~~~~~~R~~~~~~~~ali~~~~~~~~~~~~~~~~n~~~~~ 332 (404) T TIGR00881 253 LTQEKGFSKEKASAAFTLFELGGLVGTLLAGWLSDKATRKFLFKGRRAPLAVIFMALIIVSLLVYWLIPAANYTNKLMDL 332 (404) T ss_pred HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH T ss_conf 56530655102314457888878899999999999999988515885356899999999999999874226887358999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH Q ss_conf 9899899999999999999999853-46676999999999999999-99999999998311 Q gi|254780967|r 306 IAFFFLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVIS-TILGIIIGQSFNGT 364 (398) Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~ 364 (398) T Consensus 333 ~~~~~~Gf~~yGp~~L~g-~~A~~~aP~~a~G~a~G~~Gf~ay~gGs~~A~~~~g~~~~~t 392 (404) T TIGR00881 333 ICLFALGFLVYGPQMLIG-VIASELAPKKAAGTAAGFVGFFAYLGGSILAGLPLGYLADGT 392 (404) T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC T ss_conf 999999988889999999-999720158899998999998888799888624462343144 |
In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , : E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase . These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=229.75 Aligned_cols=328 Identities=20% Similarity=0.366 Sum_probs=254.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999886576699999999998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 3 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~i~~~~~g~l~D~~grk~~~~~~~~~~~i~~i~~ 81 (352) T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAG-LIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999793999999-99999999999999999999998096999999999999999999 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111101456788 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG 165 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~ 165 (398) T Consensus 82 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~ig~~i~~~l~-~~~~~~~~~~~~~ 160 (352) T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA-ESLGWRWLFLILA 160 (352) T ss_pred HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHH T ss_conf 976329999999999862210010799999860489999999999989887567899999999999-8644899999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCH Q ss_conf 8887777888761678864022101111112333100000000025677788763100146888765455431531-101 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLF 244 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (398) T Consensus 161 ~~~~~~~i~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (352) T cd06174 161 ILGLLLALLLLFLL---------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEA 213 (352) T ss_pred HHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH T ss_conf 99999999999999---------------------------999999999999999999999999999998248987777 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 58899886576778899999850015651246887788899999999873257776403799899899999999999999 Q gi|254780967|r 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS 324 (398) Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (398) T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352) T cd06174 214 GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLL--LAALGLLLLALAP----SLALLLVALLLLGFGLGFAFPALL 287 (352) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7888999999999999999999982738999999999--9999999999886----599999999999999999999999 Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99985346-676999999999999999999999999983117999 Q gi|254780967|r 325 SISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI 368 (398) Q Consensus 325 ~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 368 (398) T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~i~g~i~~~~g~~~ 332 (352) T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGG 332 (352) T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH T ss_conf 999998796079999999999999999999999999999878999 |
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=228.13 Aligned_cols=345 Identities=16% Similarity=0.193 Sum_probs=224.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999886576699999999998199988999999999999999999999999865082899999999999999985100 Q gi|254780967|r 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI 88 (398) Q Consensus 9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a 88 (398) T Consensus 51 l~~~~~~ld~tivatAlP~I~~dl~~~-~~~~-W~~taylLast~~~pl~GkLsDifGRK~~~l~~~~lf~vGsiic~~A 128 (598) T pfam06609 51 LNVCATYFVLQASASALPNILQDIGQS-ENQG-LFSTLWTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTA 128 (598) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEE-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC T ss_conf 999999950027663471699870898-7735-49999999999999737689878367999999999999999999546 Q ss_pred CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 11011100223210011111110001233210001111221223310001111111111222211111101456788888 Q gi|254780967|r 89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT 168 (398) Q Consensus 89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~ 168 (398) T Consensus 129 ~s~~~lI~grai~G~gaG~~~~-~~~ii~~~~~~r~r~~g~~~~~~~~~~~s~~GPllGg~~~-~~~sWRW~Fyinlpi~ 206 (598) T pfam06609 129 NKFNTLLAAMTLLGVAAGPAGA-SPLFIGELMSNKTKFLGLLIVSAPTIAMNGAGPYFGQRLA-IQGNWRWIFYIYIIMS 206 (598) T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEHHHHHH T ss_conf 6699999999999984788888-8876125516541132305999999999766788788842-4788428862215789 Q ss_pred HHHHHHHHH-HCCCCCCHHHHCCCCCCCC--------------------------------CCC---------------- Q ss_conf 777788876-1678864022101111112--------------------------------333---------------- Q gi|254780967|r 169 TFITLWYYI-RFPETLDPRDVRPLNLYAI--------------------------------LHS---------------- 199 (398) Q Consensus 169 ~~~~~~~~~-~~pet~~~~~~~~~~~~~~--------------------------------~~~---------------- 199 (398) T Consensus 207 ~va~~~~~~~~~pP~~~~~~~~~~~~~~~l~~iD~~G~~L~~~gl~~lLl~lswGG~~~~pW~S~~VI~~lv~G~v~lv~ 286 (598) T pfam06609 207 AIAVLLIIIWYHPPSFAQLHGKKARKRDELAKLDWIGIFLVIAGTSLFLLGVSWGGKPNNPWNSAKIIGLISSGAGSLVI 286 (598) T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 99999999981586200026665436766410484439999999999999996358777775448999999999999999 Q ss_pred ---------------CCCCCCCCHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHH Q ss_conf ---------------1000000000-256777887631001468887654554315311----01588998865767788 Q gi|254780967|r 200 ---------------FSLIFKHRAS-TLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN----LFPIAFAVGGFAMSIAS 259 (398) Q Consensus 200 ---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 259 (398) T Consensus 287 F~~~E~~~~~~~PmiP~rLFk~~r~~~~~~~~~~~~g~~~~~~~~~~P~~~~~v~g~s~~~~~~~~~~~~~~~~~~~~g~ 366 (598) T pfam06609 287 FALYEVFGKPEQPIIPPALFKDTRGFVCILIISSIMGAMHLCLTIIYPQQVINIFGSSLKNWEETAWMSATASFGTGAGV 366 (598) T ss_pred HHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 88886440278886888998176199999999999999999999999999986024443324676999999999999999 Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH Q ss_conf 99999850015651246887788899999999873257776403799899899999999999999999853-46676999 Q gi|254780967|r 260 FINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP-FSHLAGTA 338 (398) Q Consensus 260 ~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a 338 (398) T Consensus 367 ~i~g~~~~~~~~~r~~~i~g~~~-~t~~~glls~l~~~t~-~~~--i~~~il~G~GiG~~~q~~~iavQ~~~p~~digva 442 (598) T pfam06609 367 MILGNLFHLIRHIRWQILVGALW-LTAFLGAMSSINRDNK-NAA--IALSFFSGFVVAWAQDITMLLVQFITTDEDLGVA 442 (598) T ss_pred HHHHCEEECCCCCHHHHHHHHHH-HHHHHHHHHHCCCCCC-HHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH T ss_conf 98701331034311699999999-9999999983289993-489--9999999997998765778652225998998999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999999998 Q gi|254780967|r 339 SSIFGFINTVISTILGIIIGQSF 361 (398) Q Consensus 339 ~~l~~~~~~~~~~~~~~~~g~~~ 361 (398) T Consensus 443 ts~~~f~RslGGaIGvAI~~sIf 465 (598) T pfam06609 443 FAVVAAARPFAGSIFTAAFISLY 465 (598) T ss_pred HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999998699999999999 |
This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes. |
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=202.99 Aligned_cols=353 Identities=15% Similarity=0.159 Sum_probs=204.4 Q ss_pred HHHHHHHHHHHHHH--HHHH--HHHHHHHHHHHHH----CCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH Q ss_conf 38999999999988--6576--6999999999981----99988---999999999999999999999999865082899 Q gi|254780967|r 2 EFVIVIAMLMAINS--LGID--IILPCLPKISDSL----HLSNE---NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIV 70 (398) Q Consensus 2 ~~i~~l~~~~~~~~--~~~~--~~~p~lp~i~~~l----~~s~~---~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~ 70 (398) T Consensus 8 ~~~~~~~~~a~lg~~~fGYd~~~is~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iGal~~g~l~Dr~GRk~~ 87 (486) T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSSRFGRRDS 87 (486) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 99999999999999999983716846899899984366678853057899999999999999999999999877455999 Q ss_pred HHHHHHHHHHHHHHHH------------------CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC Q ss_conf 9999999999999851------------------0011011100223210011111110001233210001111221223 Q gi|254780967|r 71 MMFGLVIHIISTFIMV------------------TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA 132 (398) Q Consensus 71 l~~g~~~~~i~~~~~~------------------~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~ 132 (398) T Consensus 88 l~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~R~i~G~g~G~~~~~~p~yisE~ap~~~RG~~~~~~ 167 (486) T PRK10077 88 LKIAAVLFFISAVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFN 167 (486) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 99999999999999876655555303125788888757999999999998559878889999999848786741475699 Q ss_pred CCEECCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH-----HHCC---------- Q ss_conf 31000111111111122221-------1111101456788888777788876167886402-----2101---------- Q gi|254780967|r 133 MMIFMIMPILAPSIGQATVA-------LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR-----DVRP---------- 190 (398) Q Consensus 133 ~~~~~~g~~igp~ig~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~-----~~~~---------- 190 (398) T Consensus 168 ~~~~~~G~l~~~~v~~~~~~~~~~~~~~~~~WR~~~~~~~ipa~~~~~-~~~~lPESPrwL~~kgr~eeA~~~l~~l~~~ 246 (486) T PRK10077 168 QFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASECIPALLFLM-LLYFVPESPRWLMSRGKQEQAESILRKIMGN 246 (486) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHCCCHHHHHHHHHHHHCC T ss_conf 999999999999999998607872125773389999989999999999-9996786709999869999999999998398 Q ss_pred CCCCCCC-----------CCCCCCCCCCH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH-HHHHHHHHH Q ss_conf 1111123-----------33100000000---02567778876310014688876545543153110158-899886576 Q gi|254780967|r 191 LNLYAIL-----------HSFSLIFKHRA---STLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPI-AFAVGGFAM 255 (398) Q Consensus 191 ~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 255 (398) T Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~q~~Gi~~i~~y~~~i~~~~g-~~~~~~~~~~~~~~~~~ 325 (486) T PRK10077 247 TLATQALQEIKHSLDHGRKTGGRLLMFGVGVIVIGVLLSVFQQFVGINVVLYYAPEIFKTLG-ASTDIALLQTIIVGVIN 325 (486) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHH T ss_conf 30789999999999998875447775142999999999999999815459963999999839-98746999999999988 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH Q ss_conf 77889999985001565124688778889999999987325777640379989989999999999999999985346-67 Q gi|254780967|r 256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HL 334 (398) Q Consensus 256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 334 (398) T Consensus 326 ~~~~~~~~~lvdr~GRR~lli~g~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~-~gp~~~~~~sEifPt~i 403 (486) T PRK10077 326 LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAMS-WGPVCWVLLSEIFPNAI 403 (486) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHH T ss_conf 7799999998725387799999999999999999999885-314189999999999999987-98998842384166607 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 699999999999999999999999 Q gi|254780967|r 335 AGTASSIFGFINTVISTILGIIIG 358 (398) Q Consensus 335 ~G~a~~l~~~~~~~~~~~~~~~~g 358 (398) T Consensus 404 R~~g~~i~~~~~~~~~~iv~~~~p 427 (486) T PRK10077 404 RGKALAIAVAAQWIANYFVSWTFP 427 (486) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999 |
|
| >KOG2532 consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=211.11 Aligned_cols=345 Identities=17% Similarity=0.202 Sum_probs=249.8 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC--CHHHHCCCCCCCCCCCC Q ss_conf 9981999889999999999999999999999998650828999999999999999851001--10111002232100111 Q gi|254780967|r 29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN--SFTGMLCMRLIQGIGGA 106 (398) Q Consensus 29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~--~~~~l~~~r~l~G~g~~ 106 (398) T Consensus 65 ~~~~~ws~~~k~-~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466) T KOG2532 65 AGEYDWSSTEKG-LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466) T ss_pred CCEECCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH T ss_conf 641135855434-7648999999999823799998918538899999999999999999998262287899997104676 Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH Q ss_conf 11110001233210001111221223310001111111111222211111101456788888777788876167886402 Q gi|254780967|r 107 APRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR 186 (398) Q Consensus 107 ~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~ 186 (398) T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466) T KOG2532 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466) T ss_pred HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHC T ss_conf 66440310201058888899999999999899899988648998625769877999987998988776555314883427 Q ss_pred H------HC---CC-CCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHH Q ss_conf 2------10---11-1111----2333100000000025677788763100146888765455431531-1015889988 Q gi|254780967|r 187 D------VR---PL-NLYA----ILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVG 251 (398) Q Consensus 187 ~------~~---~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 251 (398) T Consensus 224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466) T KOG2532 224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466) T ss_pred CCCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHH T ss_conf 97689999999827440003788999989997084999999999998899999999771999973287854546998769 Q ss_pred HHHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 657677889999985001565------12468877888999999998732577764037998998999999999999999 Q gi|254780967|r 252 GFAMSIASFINSRLVEKFGIR------RVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS 325 (398) Q Consensus 252 ~~~~~~~~~~~~~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (398) T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~--~~a~~~l~~~~~~~g~~~~Gf~~ 381 (466) T KOG2532 304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR--LLAVILLTIAIGLSGFNISGFYK 381 (466) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHHHHHHHHCCHHHHH T ss_conf 9999999999999988987536865799999998889999998765300588751--58999999999986401110344 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH Q ss_conf 998534667699999999999999999999999998-311799999999999 Q gi|254780967|r 326 ISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF-NGTTYPITIGFFGIA 376 (398) Q Consensus 326 ~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 376 (398) T Consensus 382 ~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a 433 (466) T KOG2532 382 NHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAA 433 (466) T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH T ss_conf 2021026679999999999999999888782013507999799999999999 |
|
| >KOG1330 consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=221.69 Aligned_cols=354 Identities=18% Similarity=0.204 Sum_probs=226.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999886576699999999998199988999999999999999999999999865082899999999999999985 Q gi|254780967|r 6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398) Q Consensus 6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398) T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~G-ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~ 115 (493) T KOG1330 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELG-LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS 115 (493) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH T ss_conf 99999999874341200156778876088902056-01489999999999889988764274158755889999999998 Q ss_pred HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 10011011100223210011111110001233210001111221223310001111111111222211111101456788 Q gi|254780967|r 86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG 165 (398) Q Consensus 86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~ 165 (398) T Consensus 116 ~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~a 195 (493) T KOG1330 116 GFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSA 195 (493) T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEH T ss_conf 88999999999998842405441102026766407602566778875421013564147740154157663689887400 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC Q ss_conf 888777788876167886402210111-------1112333100000000025677788763100146888765455431 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVRPLN-------LYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY 238 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (398) T Consensus 196 vl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~ 275 (493) T KOG1330 196 VLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSY 275 (493) T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH T ss_conf 89999999987503574223210123677677885226788999870670130058999998830643234566788899 Q ss_pred ---CCCCCHHHHH-HHHHHHHH----HHHHHHHHHHHCCCCCCHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCHHHHH Q ss_conf ---5311015889-98865767----788999998500156512468877---888999999998732577764037998 Q gi|254780967|r 239 ---QLGNLFPIAF-AVGGFAMS----IASFINSRLVEKFGIRRVSHYSLL---IFFMITGSWLLVQITSNHPIHLLIFIA 307 (398) Q Consensus 239 ---~~~~~~~~~~-~~~~~~~~----~~~~~~~~l~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (398) T Consensus 276 ~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~--~~~~s~~~~~ 353 (493) T KOG1330 276 ELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA--FTSSSMIFGL 353 (493) T ss_pred HHHCCCCCCCHHHHHHHHHHCHHHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH T ss_conf 87077644222555689860524402127888888874266430547789876114589999999986--1148899999 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH Q ss_conf 99899999999999999-99985-34667699999999999999999999-9999983 Q gi|254780967|r 308 FFFLASFQFGLINSNFS-SISME-PFSHLAGTASSIFGFINTVISTILGI-IIGQSFN 362 (398) Q Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~-~~g~~~~ 362 (398) T Consensus 354 il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493) T KOG1330 354 ILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493) T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHH T ss_conf 9999999998616556643136862755320899999999998324888614046788 |
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=199.84 Aligned_cols=350 Identities=15% Similarity=0.133 Sum_probs=256.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999999988657669999999999819998899999999999999999999999986508289999999999999998 Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 29 ~lv~~LFF~wGf~t~l~~~Li~~fk~~f~Ls~~qa~-lv~~aff~aY~v~siPag~li~r~GyK~~ii~GL~l~a~G~ll 107 (438) T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAG-LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAAL 107 (438) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999987677899999999096899998-9999999999999988999999975399999999999999999 Q ss_pred H---HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC------- Q ss_conf 5---100110111002232100111111100012332100011112212233100011111111112222111------- Q gi|254780967|r 85 M---VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS------- 154 (398) Q Consensus 85 ~---~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~------- 154 (398) T Consensus 108 F~paa~~~sy~~fL~alFvig~Gla~LQtaaNPyi~~lG~~e~a~~RLnlaq~fN~lGt~i~pll~~~li~~~~~~~~~~ 187 (438) T PRK10133 108 FWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQD 187 (438) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH T ss_conf 99998872699999999999971999998088999997895239999999999787899999999999995577510167 Q ss_pred ------------------CCCCHHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf ------------------1110145678888877778-887616788640221011111123331000000000256777 Q gi|254780967|r 155 ------------------GGWIGIFVCMGVITTFITL-WYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIA 215 (398) Q Consensus 155 ------------------~gWr~~f~~~~~~~~~~~~-~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (398) T Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~~pYl~ia~~~~~lal~~~~~~lP~i~~~~~-~~~~~~~~~~~~~~l~~~~~~~lgv~a 266 (438) T PRK10133 188 VLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-SDAKQGSFSASLSRLARIRHWRWAVLA 266 (438) T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCHHHHHHHHHCHHHHHHHHH T ss_conf 7863489889888777899999999999999999999999934998887642-100023302447887404299999999 Q ss_pred HHHHHHCCHHHHHHHHHHHHH-HCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 887631001468887654554-3153110-15889988657677889999985001565124688778889999999987 Q gi|254780967|r 216 NSLTMGAILGFVNSSQQIYVG-IYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ 293 (398) Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398) T Consensus 267 iF~YVGaEV~i~s~~i~y~~~~~~g~~~~~a~~~~s~~~~~~~vGRfig~~ll~~~~~~~~L~~~a~~----~iil~l~a 342 (438) T PRK10133 267 QFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI----AMALCLIS 342 (438) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH----HHHHHHHH T ss_conf 99999999999999999998724898677899999999999999999999998257899999999999----99999999 Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 325777640379989989999999999999999985346676999999999999999999999999983117 Q gi|254780967|r 294 ITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398) Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398) T Consensus 343 ~~~~g----~~~~~al~lvg~f~Sim~PtIFsLal~gLG~~t~~~S~iL-vm~IvGGAilP~l~G~laD~~G 409 (438) T PRK10133 343 AFAGG----HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFI-VMTIIGGGIVTPVMGFVSDAAG 409 (438) T ss_pred HHCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC T ss_conf 98288----6999999999999888899999999673421121279999-9999732889999999998528 |
|
| >TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=200.01 Aligned_cols=326 Identities=14% Similarity=0.121 Sum_probs=213.0 Q ss_pred CHHHHH-HHHHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH--------HCCCCCCCC Q ss_conf 988999-99999999999---999999999986508289999999999999998510011011--------100223210 Q gi|254780967|r 35 SNENYG-QHLISFYLIGY---GIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTG--------MLCMRLIQG 102 (398) Q Consensus 35 s~~~~~-~~~~s~~~~~~---~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~--------l~~~r~l~G 102 (398) T Consensus 28 ~dp~~~~~~~~atFa~gFl~RP~Gg~~FG~~GDr~GRk~~L~~tl~~Mg~~T~~IGLlPsY~~IG~~APiLL~~~Rl~QG 107 (413) T TIGR00883 28 GDPLVALLATFATFAVGFLARPLGGIVFGHFGDRIGRKKTLVITLLMMGIGTVLIGLLPSYATIGIWAPILLLLARLIQG 107 (413) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 88278999999999999999889999998863235469999999999857665312247601177899999999999843 Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCC--------CCC-CCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 011111110001233210001111221223310001111111111--------222-21111110145678888877778 Q gi|254780967|r 103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIG--------QAT-VALSGGWIGIFVCMGVITTFITL 173 (398) Q Consensus 103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig--------~~l-~~~~~gWr~~f~~~~~~~~~~~~ 173 (398) T Consensus 108 fs~GGE~gGaa~~~~E~A~~gkRG~~gSf~~~g~~~G~llA~l~~~~~s~~~~~~~P~-~~WGWRiPFl~s~~l-~~~gL 185 (413) T TIGR00883 108 FSLGGEWGGAALYLVESAPPGKRGFYGSFQQVGAPVGLLLAALVVLLLSYLLGDEAPL-LEWGWRIPFLVSAVL-VLIGL 185 (413) T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHCCCHHHHHHHHHH-HHHHH T ss_conf 5678999999999997500220378888999867899999999999999972665203-310314589999999-99999 Q ss_pred HHHHHCCCCCCHHHHCCCCCC---CCCCCCCCCCCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC--------- Q ss_conf 887616788640221011111---12333100000000--0256777887631001468887654554315--------- Q gi|254780967|r 174 WYYIRFPETLDPRDVRPLNLY---AILHSFSLIFKHRA--STLYNIANSLTMGAILGFVNSSQQIYVGIYQ--------- 239 (398) Q Consensus 174 ~~~~~~pet~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 239 (398) T Consensus 186 ~lR~~L~Et~~f~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~fY~~t~y~~~Y~~~~~~vsEAGYA~G 265 (413) T TIGR00883 186 YLRRNLEETPVFEKAQEKHKTRTGKKRIPLAELLTKHRKAFLLVLGLVIATTTTFYLITTYLPTYLTTTLGVSEAGYALG 265 (413) T ss_pred HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH T ss_conf 98165645779999885212530376740999987222999999999999899999999999998865167514568773 Q ss_pred --CCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH Q ss_conf --3110-1588998865767788999998500156512468877888999999998732577764037998998999999 Q gi|254780967|r 240 --LGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQF 316 (398) Q Consensus 240 --~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (398) T Consensus 266 Lg~~~~~~~~~~~~~~i~~~~~~P~~G~LsDriGRR~~~i~~~~~~~~~-~~p~l~~l~~~~y~~~~~~~~~~~~~~~i~ 344 (413) T TIGR00883 266 LGLSANSALLVLMLSLILFFVVIPLSGALSDRIGRRRVLIIFTVLAALL-AVPLLMALLDSGYSPFTLVFFLLLGLALIG 344 (413) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHH T ss_conf 2687668999999999999999999999975536539999999999999-999999874178768999999999999999 Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 9999999999985346-67699999999999-99999999999999831 Q gi|254780967|r 317 GLINSNFSSISMEPFS-HLAGTASSIFGFIN-TVISTILGIIIGQSFNG 363 (398) Q Consensus 317 ~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~-~~~~~~~~~~~g~~~~~ 363 (398) T Consensus 345 ~~~~g~~~~~~~ElFPt~vR~~G~~l~y~~A~~~~GG~aP~iA~~L~~~ 393 (413) T TIGR00883 345 GMYTGPMGSLLPELFPTEVRYTGASLAYNLAGAIGGGLAPYIAAALVAI 393 (413) T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9878769998772334407899887999999998656899999999972 |
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated . The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified . Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 prove to be a characteristic of virtually all of the more than 300 MFS proteins identified. This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=192.08 Aligned_cols=346 Identities=13% Similarity=0.143 Sum_probs=259.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 99999998865766999999999981999889999999999999999999999998650828999999999999999851 Q gi|254780967|r 7 IAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV 86 (398) Q Consensus 7 l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~ 86 (398) T Consensus 18 ~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~-liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~ 96 (422) T COG0738 18 LTSLFFLWGFITCLNDILIPHLKEVFDLTYFEAS-LIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW 96 (422) T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999962211407999999386599999-999999998999861499999884248899999999999999986 Q ss_pred ---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC---------- Q ss_conf ---0011011100223210011111110001233210001111221223310001111111111222211---------- Q gi|254780967|r 87 ---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVAL---------- 153 (398) Q Consensus 87 ---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~---------- 153 (398) T Consensus 97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422) T COG0738 97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH T ss_conf 66651129999999999984068888514416987277156889989999864169899999999999732251048889 Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH Q ss_conf --------1111014567888887777888-7616788640221011111123331000000000256777887631001 Q gi|254780967|r 154 --------SGGWIGIFVCMGVITTFITLWY-YIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAIL 224 (398) Q Consensus 154 --------~~gWr~~f~~~~~~~~~~~~~~-~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (398) T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~---~~~~~l~~~~~~~~gvl~~FlYVG~Ev 253 (422) T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGS---AGLSSLFQNKHLRLGVLAIFLYVGAEV 253 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CHHHHHHHCHHHHHHHHHHHHHHHHHH T ss_conf 99999998875650899999999999999984359767856511256564---138899757489999999999984999 Q ss_pred HHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH Q ss_conf 4688876545543153110-158899886576778899999850015651246887788899999999873257776403 Q gi|254780967|r 225 GFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLL 303 (398) Q Consensus 225 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (398) T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~---~~~l~~g-----~ 325 (422) T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL---AVALIGG-----V 325 (422) T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHHCC-----H T ss_conf 9999999999865996389999999999999999999999999971888999999999999999---9999647-----4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 79989989999999999999999985346676999999999999999999999999983117 Q gi|254780967|r 304 IFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398) Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398) T Consensus 326 v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l-~maivGGAiiP~l~G~i~d~~g 386 (422) T COG0738 326 VALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLL-VMAIVGGAIIPPLQGVIADMFG 386 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE-EEHEECCHHHHHHHHHHHHHHH T ss_conf 999999999998677788999999831476556541133-3110230388899999997540 |
|
| >KOG0255 consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-28 Score=172.10 Aligned_cols=352 Identities=17% Similarity=0.213 Sum_probs=198.3 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCC Q ss_conf 99819998899999999999999999999999986508289999999999999998510011011100223210011111 Q gi|254780967|r 29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAP 108 (398) Q Consensus 29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~ 108 (398) T Consensus 110 ~~~~c~~~~~~~-~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521) T KOG0255 110 WNLVCDSSTLVA-LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521) T ss_pred HHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH T ss_conf 657415399999-9999999999999999998877437606999999999998899997330999999999999863108 Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH Q ss_conf 11000123321000111122122331000111111111122221111110145678888877778887616788640221 Q gi|254780967|r 109 RIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDV 188 (398) Q Consensus 109 ~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~ 188 (398) T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521) T KOG0255 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521) T ss_pred HHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHH T ss_conf 99999999852265576688999-87877999999999999987---2899999999999999999-9987658779998 Q ss_pred C-----------C--------CCCCCCC-----------------CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH Q ss_conf 0-----------1--------1111123-----------------33100000000025677788763100146888765 Q gi|254780967|r 189 R-----------P--------LNLYAIL-----------------HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ 232 (398) Q Consensus 189 ~-----------~--------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (398) T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~~y~g-- 340 (521) T KOG0255 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF-VFSLVYYG-- 340 (521) T ss_pred HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHH-- T ss_conf 387777999999987543555665888999988877665215663229999805899999999999999-98888977-- Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH Q ss_conf 45543153110158899886576778899999850015651246887788899999999873257776403799899899 Q gi|254780967|r 233 IYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA 312 (398) Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (398) T Consensus 341 l~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 416 (521) T KOG0255 341 LSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGL---LLFGWLPDDLGG-WLHWILPLLG 416 (521) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCCC-HHHHHHHHHH T ss_conf 864243036308899999999999998841213421418999999999999999---999998444420-6999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCH Q ss_conf 999999999999999853466-76999999999999999999999999983-1179999999999999999999994220 Q gi|254780967|r 313 SFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIGQSFN-GTTYPITIGFFGIAVSSFICILIVEKNQ 390 (398) Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (398) T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521) T KOG0255 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521) T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999999999999987725089989999999999999999999999999865546799999999999999999632215 Q ss_pred HHH Q ss_conf 003 Q gi|254780967|r 391 MFR 393 (398) Q Consensus 391 ~~r 393 (398) T Consensus 497 ~~~ 499 (521) T KOG0255 497 GKP 499 (521) T ss_pred CCC T ss_conf 885 |
|
| >TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug antiporters which use the proton motive force for the active efflux of the drug | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=176.36 Aligned_cols=350 Identities=16% Similarity=0.141 Sum_probs=253.3 Q ss_pred HHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HH Q ss_conf 9988657669999999--999819998899999999999999999999999986508289999999999999998---51 Q gi|254780967|r 12 AINSLGIDIILPCLPK--ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI---MV 86 (398) Q Consensus 12 ~~~~~~~~~~~p~lp~--i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~---~~ 86 (398) T Consensus 9 ~~s~~G~ai~~vAl~llA~vl~~~g~~~~l~-la~~~~~~p~~~~~piaG~~~DR~~Rk~~~~~~Dlirav~~~~l~~~~ 87 (387) T TIGR00900 9 LISLLGSAITQVALPLLAYVLAGTGSASVLS-LAALAGLLPYVVLSPIAGVLVDRYDRKKVMIGADLIRAVLVAVLPFVA 87 (387) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999985047666899-999998876414303300231157711667888899999999999999 Q ss_pred CCC-----CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCC Q ss_conf 001-----1011100223210011111110001233210001--11122122331000111-111111122221111110 Q gi|254780967|r 87 TIN-----SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMP-ILAPSIGQATVALSGGWI 158 (398) Q Consensus 87 ~a~-----~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~-~igp~ig~~l~~~~~gWr 158 (398) T Consensus 88 ~~~Gvd~l~~~~~~v~~~i~~~~~~Ff~pa~~a~~P~~vp~e~W~l~~Ans~~~~~~~~~~r~vgPgigg~~~~-~~g~~ 166 (387) T TIGR00900 88 LLGGVDVLEIWMVYVVAFILAIAQAFFTPAYQAMLPDLVPEEKWQLTRANSLSQLVRSLFYRIVGPGIGGLLYA-TLGIK 166 (387) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH T ss_conf 84650123499999999999977642130222002000211234799998799999999887567999999999-99999 Q ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHC-C-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH-H Q ss_conf 145678888877778-8876167886402210-1-------1111123331000000000256777887631001468-8 Q gi|254780967|r 159 GIFVCMGVITTFITL-WYYIRFPETLDPRDVR-P-------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV-N 228 (398) Q Consensus 159 ~~f~~~~~~~~~~~~-~~~~~~pet~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 228 (398) T Consensus 167 ~~~~~~a~~F~~s~~l~~~~r~p~~~~~~~~~~~~rkts~~~~~rd~~eG~~~~~~~~~L~~l~~~~~~~~~~~~p~~~~ 246 (387) T TIGR00900 167 WAILVDAVGFLISALLIVSVRIPEKAASEIEPLSERKTSLKAVLRDILEGLKFVLKNKVLRTLLLLALLFNLVFAPIIVV 246 (387) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999998650576667888888752565899999999999999970768999999999999985127887 Q ss_pred HHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH--HHHHHHHCCCCCCCCHHH Q ss_conf 8765455431531-1015889988657677889999985001565124688778889999--999987325777640379 Q gi|254780967|r 229 SSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITG--SWLLVQITSNHPIHLLIF 305 (398) Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 305 (398) T Consensus 247 l~P~~~~~~~~~~~~~~G~~~~af~~G~l~G~L~~~~~L~~~~~~~~~r~~l~~~a~~~~g~~~~~~~~~~~~~~~~~~~ 326 (387) T TIGR00900 247 LFPYVTSKYLNRTSVHVGWVLAAFGLGALLGALLLGSILRRLLGRYFKRIALITGAVLVIGLAILVVGLLPPRNSGFLLL 326 (387) T ss_pred HHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH T ss_conf 63032144407862256799999999999999999999988761134348999999999999989876238961489999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 98998999999999999999998534-66769999999999999999999999999831 Q gi|254780967|r 306 IAFFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNG 363 (398) Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~ 363 (398) T Consensus 327 l~~~~~~G~~~~~~~~~~~~~~q~~v~~~~~GRV~~~~~~~~~~a~Plgl~l~G~L~~~ 385 (387) T TIGR00900 327 LVLAFAIGVGVGLINVPIGTLLQRSVPAELLGRVFGLQFSLSSAAGPLGLILAGPLADK 385 (387) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999864203455877887888750078515899999999999999889999988863 |
; GO: 0016021 integral to membrane. |
| >KOG0254 consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-28 Score=171.08 Aligned_cols=332 Identities=17% Similarity=0.183 Sum_probs=205.4 Q ss_pred HHHHHHHHHHHHHC-----CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH Q ss_conf 69999999999819-----998--89999999999999999999999998650828999999999999999851001101 Q gi|254780967|r 20 IILPCLPKISDSLH-----LSN--ENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT 92 (398) Q Consensus 20 ~~~p~lp~i~~~l~-----~s~--~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~ 92 (398) T Consensus 65 ~~s~~~~~~~~~~~~~~~~~~~~~~~~s-~i~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~i~~~iG~ii~~~a~~~~ 143 (513) T KOG0254 65 GISGALDFLQRFASLYDLSTGEYSVRQG-LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY 143 (513) T ss_pred CHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 0378899998404323444304677767-999999999999999999999784339999999999999999999970499 Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHH Q ss_conf 11002232100111111100012332100011112212233100011111111112222111-11101456788888777 Q gi|254780967|r 93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFI 171 (398) Q Consensus 93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~ 171 (398) T Consensus 144 ~l~~GR~l~G~g~G~~~~~~piyisEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~-~~~~~~~Wr~~~~~~~i~~~~~ 222 (513) T KOG0254 144 QLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG-TSKVYAGWRIPLGLALIPAVIL 222 (513) T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHH T ss_conf 999999998545278766336776303765268899999999999999999998662-0245655899999999999999 Q ss_pred HHHHHHHCCCCCCHHHHC--------------C---CCCCCCC----------------C-CCCCCCC----CCHHHHHH Q ss_conf 788876167886402210--------------1---1111123----------------3-3100000----00002567 Q gi|254780967|r 172 TLWYYIRFPETLDPRDVR--------------P---LNLYAIL----------------H-SFSLIFK----HRASTLYN 213 (398) Q Consensus 172 ~~~~~~~~pet~~~~~~~--------------~---~~~~~~~----------------~-~~~~~~~----~~~~~~~~ 213 (398) T Consensus 223 ~~~-~~~~pesP~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~ 301 (513) T KOG0254 223 ALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLL 301 (513) T ss_pred HHH-HHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH T ss_conf 999-9946788799998394999999999980998430577899999998898887520024765223477778999999 Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 77887631001468887654554315311015889988657677889999985001565124688778889999999987 Q gi|254780967|r 214 IANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ 293 (398) Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398) T Consensus 302 l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~~~~~~~lvd~~GRr~lll~s~~~m~~~~~~~~~~~ 380 (513) T KOG0254 302 LQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVG 380 (513) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999985889999999999995468722-8999999999999999999999873541489987999999999999986 Q ss_pred HCCCCC-----CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 325777-----64037998998999999999999-9999985346-67699999999999999999999 Q gi|254780967|r 294 ITSNHP-----IHLLIFIAFFFLASFQFGLINSN-FSSISMEPFS-HLAGTASSIFGFINTVISTILGI 355 (398) Q Consensus 294 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~ 355 (398) T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513) T KOG0254 381 VFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513) T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 211036541137799999999999999998732478888860241778989999999998899999999 |
|
| >TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-27 Score=166.57 Aligned_cols=341 Identities=13% Similarity=0.118 Sum_probs=261.9 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC Q ss_conf 65766999999999981999889999999999999999999999998650828999999999999999851001101110 Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML 95 (398) Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~ 95 (398) T Consensus 14 PalTSvgPLL~~~R~~lgmS~~~AG-LLT~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i~aG~l~R~~~~~~~~Lf 92 (372) T TIGR00896 14 PALTSVGPLLEEVRSALGMSASVAG-LLTALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLIAAGILIRESAPGTALLF 92 (372) T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH T ss_conf 9997488789999877351588899-987578999998887545887662527999999999999999830477305999 Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHH Q ss_conf 0223210011111110001233210001111221223310001111111111222211111-101456788888777788 Q gi|254780967|r 96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-WIGIFVCMGVITTFITLW 174 (398) Q Consensus 96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-Wr~~f~~~~~~~~~~~~~ 174 (398) T Consensus 93 ~gtal~G~GIai~nVLlP~lIKR~Fp-~~~g~m~GlYs~al~~gaaLaaa~tVPL~~~~~g~W~~~L~~W~~~allAll~ 171 (372) T TIGR00896 93 AGTALAGVGIAIINVLLPSLIKRDFP-ERVGLMTGLYSMALALGAALAAAATVPLAQALGGRWQQALALWALLALLALLL 171 (372) T ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 99999998999977570301002145-54304678999999988766613324556246784189999999999999982 Q ss_pred HHHHCCCCCC----------HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH Q ss_conf 8761678864----------022101111112333100000000025677788763100146888765455431531101 Q gi|254780967|r 175 YYIRFPETLD----------PRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF 244 (398) Q Consensus 175 ~~~~~pet~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (398) T Consensus 172 W~PQ~r~~~a~~~~~~~APrPedGrs-aekrael~~~~i~rsp~AW~vt~f~GL~s~~~Y~~igWlP~Ili~~G~sa~~A 250 (372) T TIGR00896 172 WLPQVRRRKAANQTAKRAPRPEDGRS-AEKRAELTPKRIWRSPLAWQVTVFFGLQSLLYYIVIGWLPAILISHGVSAATA 250 (372) T ss_pred CCHHHCCCCCHHHCCCCCCCCCCCCC-HHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH T ss_conf 02020142151102677978877640-33330157652131505899999998999999999999999998638877568 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 58899886576778899999850015651246887788899999999873257776403799899899999999999999 Q gi|254780967|r 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS 324 (398) Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (398) T Consensus 251 G~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G-~~Gl~~~P-~~~---~~~-iW~~~~G~G~G~~f~LaL 324 (372) T TIGR00896 251 GLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVG-LCGLLFAP-LHG---LWA-IWALVLGLGQGGAFSLAL 324 (372) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HHHHHHHH-HHH---HHH-HHHHHHHHCCCHHHHHHH T ss_conf 999999999987689998899704885699999999999999-99999850-459---999-999998301203699999 Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99985--346676999999999999999999999999983117 Q gi|254780967|r 325 SISME--PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398) Q Consensus 325 ~~~~~--~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398) T Consensus 325 tli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g 367 (372) T TIGR00896 325 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISG 367 (372) T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 9999962168899999888788999998645888888872156 |
The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >KOG3764 consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=181.45 Aligned_cols=326 Identities=16% Similarity=0.137 Sum_probs=215.2 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC Q ss_conf 99981999889999999999999999999999998650828999999999999999851001101110022321001111 Q gi|254780967|r 28 ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAA 107 (398) Q Consensus 28 i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~ 107 (398) T Consensus 97 ~~~~~~~e~~~iG-~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~ 175 (464) T KOG3764 97 EAISLDRENTQIG-LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAF 175 (464) T ss_pred HCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 1037554320023-789999999997454421567773564279999999999999998705107899999986443888 Q ss_pred CCCCCHHHHHHHHCCCC-CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH Q ss_conf 11100012332100011-11221223310001111111111222211111101456788888777788876167886402 Q gi|254780967|r 108 PRIITISIIRDIYDGRD-MAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR 186 (398) Q Consensus 108 ~~~~~~a~i~~~~~~~~-~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~ 186 (398) T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-e~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464) T KOG3764 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-EFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464) T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHH-HHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCC T ss_conf 875338999987155304447899999987503321587440057-6448757489999999999999986558334686 Q ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2101111112333100000000025677788763100146888765455431531-101588998865767788999998 Q gi|254780967|r 187 DVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRL 265 (398) Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 265 (398) T Consensus 255 ~-----~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~l 329 (464) T KOG3764 255 D-----STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKL 329 (464) T ss_pred C-----CCCCCCCHHHHHHCCHHHHHHCCHHHCCCHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCHHHHH T ss_conf 4-----46667328998847247555330221121088757510889997616887501246110253131067307999 Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH Q ss_conf 5001565124688778889999999987325777640379989-9899999999999999999853466---76999999 Q gi|254780967|r 266 VEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFSH---LAGTASSI 341 (398) Q Consensus 266 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~a~~l 341 (398) T Consensus 330 a~k~~~~~wl~~-~~gl~~~G~~~~~iP~~~~~~-~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaI 407 (464) T KOG3764 330 ADKYPHLRWLLS-LGGLATVGVSSGPIPFATSIA-QLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAI 407 (464) T ss_pred HHHCCCHHHHHH-HHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHH T ss_conf 876673358999-877999988843147555289-886635788898888788776466776034222665311118999 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHH Q ss_conf 99999999999999999-99831 Q gi|254780967|r 342 FGFINTVISTILGIIIG-QSFNG 363 (398) Q Consensus 342 ~~~~~~~~~~~~~~~~g-~~~~~ 363 (398) T Consensus 408 ad~-a~sla~a~GP~~gg~iv~~ 429 (464) T KOG3764 408 ADA-AFSLAYAIGPTFGGSLVEA 429 (464) T ss_pred HHH-HHHHHHHCCCCCCCHHEEE T ss_conf 987-8787421156443011000 |
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663 The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=172.80 Aligned_cols=345 Identities=17% Similarity=0.162 Sum_probs=221.2 Q ss_pred HHHHHHHHHHHHHHHHHCCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH Q ss_conf 65766999999999981999--------------------------8899999999999999999999999986508289 Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLS--------------------------NENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKI 69 (398) Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s--------------------------~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~ 69 (398) T Consensus 87 yDt~~i~~~~~~~~~~~~~~~~~~EVCW~~~~~~~~vn~c~~~~~~~~~~~-~~v~~~~~G~~~g~l~~g~~~~~~GRk~ 165 (572) T TIGR00879 87 YDTGVISGALALPAFEFKFTSAISEVCWLLSDGSQEVNECTGSYYSSSLWG-LVVSIFLVGGFIGALFAGWLSDRFGRKK 165 (572) T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCH T ss_conf 347899999733354313666411032205888420126521588998899-9999999999999987556777533626 Q ss_pred HHHHHHHHHHHHHHHHHCC---CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC Q ss_conf 9999999999999985100---1101110022321001111111000123321000111122122331000111111111 Q gi|254780967|r 70 VMMFGLVIHIISTFIMVTI---NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI 146 (398) Q Consensus 70 ~l~~g~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i 146 (398) T Consensus 166 ~l~~~~~~~v~g~~~~~~~~~~~~~~~~~~gR~l~G~g~G~~s~~~P~Y~sE~AP~~lRG~~~~~~ql~~t~G~l~a~~~ 245 (572) T TIGR00879 166 SLLIVALLFVIGAILMGAAATALSVEMLIVGRVLLGIGVGIASALVPMYISEIAPKALRGALVSLYQLAITIGILVAYGF 245 (572) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH T ss_conf 88999999999999999753102058899999999985318999899989733856557401257899999999999999 Q ss_pred CC-------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-------HHH-H----------------------- Q ss_conf 12-------222111111014567888887777888761678864-------022-1----------------------- Q gi|254780967|r 147 GQ-------ATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLD-------PRD-V----------------------- 188 (398) Q Consensus 147 g~-------~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~-------~~~-~----------------------- 188 (398) T Consensus 246 ~~~~A~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~-~~~~PeSPrwLv~k~~~~~~A~~~L~~~~~~~~~~~~~~~~~~~ 324 (572) T TIGR00879 246 GYGLANSGTVSLNNTLGWRIPLGLQLIPAALLFLG-LFFLPESPRWLVEKGKVEEFARKSLARLRGTSSEDKEILDELEL 324 (572) T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH T ss_conf 99998766552123222215667778999999999-98731214667516765888899999754897424789999998 Q ss_pred ----CCCCC---CCCCCCCCCCCCCCH-HHHHHHHHH----HHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHH Q ss_conf ----01111---112333100000000-025677788----763100146888765455431531-10158899886576 Q gi|254780967|r 189 ----RPLNL---YAILHSFSLIFKHRA-STLYNIANS----LTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAM 255 (398) Q Consensus 189 ----~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 255 (398) T Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~l~~~qQ~~GiN~~~YY~~~if~~~G~~~~~~~~~~si~~g~~n 404 (572) T TIGR00879 325 IDIARSIEKEQVNQSWGELFSLKRRKVERRRLFLGVVLQAFQQFTGINAIMYYSPTIFENAGVSTTDTAFLVSIIVGAVN 404 (572) T ss_pred HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 87654565653254314666217852468899999999998764314514510679999717740235776678999999 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHH---HHHHHHHHHHHHHHHHCCCCC--------C-C-CHHHHHHHHHHHHHHHHHHHH Q ss_conf 77889999985001565124688---778889999999987325777--------6-4-037998998999999999999 Q gi|254780967|r 256 SIASFINSRLVEKFGIRRVSHYS---LLIFFMITGSWLLVQITSNHP--------I-H-LLIFIAFFFLASFQFGLINSN 322 (398) Q Consensus 256 ~~~~~~~~~l~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~-~-~~~~~~~~~~~~~~~~~~~~~ 322 (398) T Consensus 405 ~~~T~~a~~~vd~~GRr~~l~~G~~~~~~~~~~~~~~g~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~f~a~f~~g~gp 484 (572) T TIGR00879 405 FIFTFVAIFLVDRFGRRPLLLIGGIEAAGMAICLFVLGILGASFVTGKGKAQDSSKSAAGNVAIVFILLFIAFFAMGWGP 484 (572) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 99999999998443057889888899999999999986400100045665332156788889999999999997325235 Q ss_pred -HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -9999985346-676999999999999999999999999983 Q gi|254780967|r 323 -FSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 323 -~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 485 ~~wv~~sE~Fp~~~R~~~~~~a~~~~w~~nf~~~~~fp~~~~ 526 (572) T TIGR00879 485 VPWVIVSEIFPLSVRPKAIAIAVAANWLANFLVGFLFPTMLE 526 (572) T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 888773126786551568999999999999999999887633 |
These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane. |
| >TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=177.26 Aligned_cols=332 Identities=14% Similarity=0.189 Sum_probs=216.7 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC Q ss_conf 99999999819998899999999999999999999999986508289999999999999998510011011100223210 Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG 102 (398) Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G 102 (398) T Consensus 33 lv~a~~a~~f~~t~~d~a-~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~~~lfs~~~l~c~fap~y~~~~i~Rl~~G 111 (453) T TIGR00891 33 LVLAEVAEEFDRTTKDVA-FLLSAVLIVRSVGALLFGLWADRVGRRLPLVTSVVLFSVATLLCAFAPTYEKLLIVRLVIG 111 (453) T ss_pred EEEECCHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH T ss_conf 565010420068447899-9999999997588999988742255603788887999999975055760788999999996 Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 0111111100012332100011112212233100011111111112222111-111014567888887777888761678 Q gi|254780967|r 103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFITLWYYIRFPE 181 (398) Q Consensus 103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~~~~~~~~~pe 181 (398) T Consensus 112 igMgG~yG~~aa~~iE~~P~~~R~~~SGll~sgya~G~~~A~~~y~~v~~~~g~~Wr~LF~~-sI~p~i~~l~~R~~~pE 190 (453) T TIGR00891 112 IGMGGEYGLAAALAIEKVPAKLRSVLSGLLISGYAVGYVLAAVVYRVVVNFLGLSWRILFFL-SILPAILALFLRLRVPE 190 (453) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHCCCCC T ss_conf 44100466799899984038762233258888999999999999998887623258999999-99999999998503862 Q ss_pred CCCHHHHCCCCCCCCCCCCCCCCCCCHH--------------------------------------------------HH Q ss_conf 8640221011111123331000000000--------------------------------------------------25 Q gi|254780967|r 182 TLDPRDVRPLNLYAILHSFSLIFKHRAS--------------------------------------------------TL 211 (398) Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~ 211 (398) T Consensus 191 ~e~w~~~~~~~-~l~~t~~~~~~gge~~~~~~~~~~~~~talWfCfaGnlqnaaivavlGllCaaifisfM~~~~~KrW~ 269 (453) T TIGR00891 191 AEVWKKALKAK-KLVKTRVDKVLGGEALVKAIVKTKAVATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMKRSVQKRWL 269 (453) T ss_pred CHHHHHHHHCC-CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 06799998403-64166899862786027999999999999999884101368999999999999999998774031247 Q ss_pred HH----HHHHHHHHCCHHHHHHHHHHHHHH--CC--CCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH Q ss_conf 67----778876310014688876545543--15--3110-158899886576778899999850015651246887788 Q gi|254780967|r 212 YN----IANSLTMGAILGFVNSSQQIYVGI--YQ--LGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIF 282 (398) Q Consensus 212 ~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 282 (398) T Consensus 270 ~fvyLvvl~~~~n~~sh~~QdllPT~L~a~tdhGlgls~~tv~~ivv~~niGAi~Gg~~fG~l~~~~grR~~~v~~~~~- 348 (453) T TIGR00891 270 LFVYLVVLLVAANYLSHAIQDLLPTYLKADTDHGLGLSKDTVAVIVVVSNIGAIVGGLVFGTLSEVLGRRLALVIALLL- 348 (453) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH- T ss_conf 8999999999988752104553220121354201345731416877872624687755302155666689999999986- Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89999999987325777640379989-989999999999999999985346-6769999999999999999999999999 Q gi|254780967|r 283 FMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQS 360 (398) Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~ 360 (398) T Consensus 349 ----g~l~i~P~Fa~~G~~~a~Lglg~F~~q~~vqG-~wGilP~hl~e~~p~d~Ra~~~G~tYqlGnL~~A~a~~I~~~l 423 (453) T TIGR00891 349 ----GQLLIVPVFALSGAEAAVLGLGLFLLQVLVQG-VWGILPKHLAELAPADARAVVAGLTYQLGNLAAALASIIEERL 423 (453) T ss_pred ----CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH T ss_conf ----01233025652141799999999999998415-7655798860459033246443631457778987623788875 Q ss_pred HHH Q ss_conf 831 Q gi|254780967|r 361 FNG 363 (398) Q Consensus 361 ~~~ 363 (398) T Consensus 424 A~r 426 (453) T TIGR00891 424 AER 426 (453) T ss_pred HHH T ss_conf 631 |
These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >KOG0569 consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-26 Score=160.05 Aligned_cols=362 Identities=16% Similarity=0.148 Sum_probs=213.2 Q ss_pred HHHC--CCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCCCCHHHHCCCCCCC Q ss_conf 9819--99889999---99999999999999999999865082899999999999999985---1001101110022321 Q gi|254780967|r 30 DSLH--LSNENYGQ---HLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTINSFTGMLCMRLIQ 101 (398) Q Consensus 30 ~~l~--~s~~~~~~---~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~---~~a~~~~~l~~~r~l~ 101 (398) T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485) T KOG0569 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485) T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 84599998679999999999999999999999899998731626789999999999999999998851589999999999 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 001111111000123321000111122122331000111111111122-2211111101456788888777788876167 Q gi|254780967|r 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQA-TVALSGGWIGIFVCMGVITTFITLWYYIRFP 180 (398) Q Consensus 102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~-l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~p 180 (398) T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~P 205 (485) T KOG0569 127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLP 205 (485) T ss_pred HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH-HHHCCC T ss_conf 9986898868889985059053012788999999999999999973387559975259999989999999999-995379 Q ss_pred CCCCH-------HH--------------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----HHHC Q ss_conf 88640-------22--------------------------1011111123331000000000256777887-----6310 Q gi|254780967|r 181 ETLDP-------RD--------------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSL-----TMGA 222 (398) Q Consensus 181 et~~~-------~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 222 (398) T Consensus 206 ESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sG 285 (485) T KOG0569 206 ESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSG 285 (485) T ss_pred CCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC T ss_conf 99606989759799999999998299862467999999999851255467859999668014679999999999998447 Q ss_pred CHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-C Q ss_conf 01468887654554315311-015889988657677889999985001565124688778889999999987325777-6 Q gi|254780967|r 223 ILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP-I 300 (398) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 300 (398) T Consensus 286 i~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~ 364 (485) T KOG0569 286 INAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGS 364 (485) T ss_pred CCEEHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 201077999999986-9987888999999999999999999999971498689999999999999999999999998666 Q ss_pred CCH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH Q ss_conf 403-7998998999999999-9999999985346-676999999999999999999999999983117-99999999999 Q gi|254780967|r 301 HLL-IFIAFFFLASFQFGLI-NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIGFFGIA 376 (398) Q Consensus 301 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~ 376 (398) T Consensus 365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~ 444 (485) T KOG0569 365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLA 444 (485) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 99999999999999753147776117888974795406899999999999999999998999998734365389899999 Q ss_pred HHHHHHHHHHHCCHHHH Q ss_conf 99999999994220003 Q gi|254780967|r 377 VSSFICILIVEKNQMFR 393 (398) Q Consensus 377 ~~~~~~~~~~~~~~~~r 393 (398) T Consensus 445 ~~~i~~y~~lPETkgr~ 461 (485) T KOG0569 445 IFLIYLYRYLPETKGRT 461 (485) T ss_pred HHHHHHHHHCCCCCCCC T ss_conf 99999999596769999 |
|
| >TIGR00892 2A0113 monocarboxylate transporter; InterPro: IPR004743 Proton-linked monocarboxylate transporters catalyse the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-27 Score=166.11 Aligned_cols=352 Identities=14% Similarity=0.149 Sum_probs=241.6 Q ss_pred HHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 8999999999988-6576-6999999999981999889999999999999999999999998650828999999999999 Q gi|254780967|r 3 FVIVIAMLMAINS-LGID-IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398) Q Consensus 3 ~i~~l~~~~~~~~-~~~~-~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398) T Consensus 25 WvVl~a~fv~~GfsYaFPkav~VFF~El~~~F~a~~Se~a-WiSSImLAvlY~~GP~sSiLVn~fG~RPv~~~GGlLas~ 103 (475) T TIGR00892 25 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETA-WISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 103 (475) T ss_pred HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCH-HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH T ss_conf 8998899998765202365451124888886178976202-576899999866698334556787845999987999866 Q ss_pred HHHHHHCCCCHHHHCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH Q ss_conf 99985100110111002-23210011111110001233210001111221223310001111111111222211111101 Q gi|254780967|r 81 STFIMVTINSFTGMLCM-RLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG 159 (398) Q Consensus 81 ~~~~~~~a~~~~~l~~~-r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~ 159 (398) T Consensus 104 GmilASFs~~~~eLYlT~G~itGLGlAfnlqPsLt~lG~YF~-rrRPLANGLA~aGsPvFLS~L~Pl~q~L-~~~fGWrG 181 (475) T TIGR00892 104 GMILASFSSNVLELYLTAGFITGLGLAFNLQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYL-FESFGWRG 181 (475) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHCCCCHHHHHHHHHHHHH-HHHCCCCH T ss_conf 899999864799999998888878898732046877323245-4453578888617623787656788998-76158504 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC--HHH-HCCCCCCC---------------------CCCC-----CCCCCCC-CHH Q ss_conf 4567888887777888761678864--022-10111111---------------------2333-----1000000-000 Q gi|254780967|r 160 IFVCMGVITTFITLWYYIRFPETLD--PRD-VRPLNLYA---------------------ILHS-----FSLIFKH-RAS 209 (398) Q Consensus 160 ~f~~~~~~~~~~~~~~~~~~pet~~--~~~-~~~~~~~~---------------------~~~~-----~~~~~~~-~~~ 209 (398) T Consensus 182 ~FLilGGllLhcC~aGa~mRP~~~~~~~~k~~~K~~~~~~~~S~~~~~~~~g~~~~~k~~~~~~~~~~LDf~~f~hnrGF 261 (475) T TIGR00892 182 SFLILGGLLLHCCVAGALMRPVGPSQRQSKSKSKEGLPEDGKSDENIDLIDGTKKLSKKSTAEKINKFLDFSLFTHNRGF 261 (475) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE T ss_conf 78999999998776142106787887664322578888778640122114785102323568998887757764178723 Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHC----CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH Q ss_conf 25677788763100146888765455431----53-11015889988657677889999985001565124688778889 Q gi|254780967|r 210 TLYNIANSLTMGAILGFVNSSQQIYVGIY----QL-GNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFM 284 (398) Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 284 (398) T Consensus 262 ~vY~~g~~~~~LGlF~-----P~ifL~pYAkd~gv~~~~AAfLLSi~gF~DifaRP~~Gl~Ag~~~~rP~~~YlFS~A~l 336 (475) T TIGR00892 262 LVYLSGNVIMFLGLFV-----PIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSVGLIAGLKLIRPRVQYLFSLALL 336 (475) T ss_pred EEHHHHHHHHHHHCCC-----HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH T ss_conf 6227889999972011-----03334752125689767789999999998888866668761752201146789999999 Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999987325777640379989989999999999999999985346-6769999999999999999999999999831 Q gi|254780967|r 285 ITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNG 363 (398) Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~ 363 (398) T Consensus 337 ~nGlt~L~---ca~a~~Y~~LV~y~~~FG~sfG~vgal~Fe~LMd~VG~~rFssA~GLvt~ve~~avL~GPPlAG~L~D~ 413 (475) T TIGR00892 337 FNGLTHLL---CALASDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 413 (475) T ss_pred HHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH T ss_conf 85178886---130137401125777897688889999999987305874451578899999534653286236788566 Q ss_pred HH Q ss_conf 17 Q gi|254780967|r 364 TT 365 (398) Q Consensus 364 ~~ 365 (398) T Consensus 414 ~~ 415 (475) T TIGR00892 414 TK 415 (475) T ss_pred HC T ss_conf 44 |
; GO: 0015355 secondary active monocarboxylate transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane. |
| >pfam01306 LacY_symp LacY proton/sugar symporter | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-23 Score=147.15 Aligned_cols=352 Identities=13% Similarity=0.077 Sum_probs=212.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHH-H Q ss_conf 9999999886576699999999998-1999889999999999999999999999998650828999999999--9999-9 Q gi|254780967|r 7 IAMLMAINSLGIDIILPCLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI--HIIS-T 82 (398) Q Consensus 7 l~~~~~~~~~~~~~~~p~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~--~~i~-~ 82 (398) T Consensus 12 ls~~yf~yF~~~g~~~pf~~lwL~~~~Gls~~~IG-il~s~~~~~~il~qp~~G~lsDk~g~rk~ll~~i~~~l~l~~~f 90 (413) T pfam01306 12 FGLFFFFYFFIMSAYFPFFPIWLHDVNHLSKTDTG-IVFSCISLFSILFQPLFGLISDKLGLRKHLLWCITGLLVLFAPF 90 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 99999999999999998999997775798999999-99999999999982789986034455018999999999999999 Q ss_pred HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC Q ss_conf 9851001----1011-1002232100111111100012332100011112212233100011111111112222111111 Q gi|254780967|r 83 FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW 157 (398) Q Consensus 83 ~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW 157 (398) T Consensus 91 fi~~~~pll~~~~~l~~lv~~i~~~~~~~~~~pl~ea~~~~~sr--~~~~~YGriRlwGSiGfai~a~~~G~l~~~~--p 166 (413) T pfam01306 91 FIYVFGPLLQSNILVGAIVGGVYLGFVFSAGAGAIEAYIEKVSR--RSNFEYGKARMFGCVGWALCASIAGILFSID--P 166 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--C T ss_conf 99999789899999999999999999985542799999999987--6377421368899999999999867887528--5 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH----HHHH Q ss_conf 014567888887777888761678864022101----11111233310000000002567778876310014----6888 Q gi|254780967|r 158 IGIFVCMGVITTFITLWYYIRFPETLDPRDVRP----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILG----FVNS 229 (398) Q Consensus 158 r~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 229 (398) T Consensus 167 ~~~f~~~s~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d~~f~~f 246 (413) T pfam01306 167 QIVFWLGSGFALILALLLMFAKPDKSSSAIVADALGANKSAFSLRLALELFRMPKFWVFVLYVVGVACVYDVFDQQFANF 246 (413) T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 28999999999999999998078764102331010124577647779999615479999999999999988777778999 Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH Q ss_conf 76545543153110158899886576778899999850015651246887788899999999873257776403799899 Q gi|254780967|r 230 SQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF 309 (398) Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (398) T Consensus 247 ~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m~~~~~l~~R~G~k~~Llla~~i~~iR~~---~~~----~~~~~~~ii~~q 319 (413) T pfam01306 247 FTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIL---GSS----FATTALEVVILK 319 (413) T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHH----CCCCHHHHHHHH T ss_conf 9999634276843121999999999999999989999870839899999999999999---974----323069999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89999999999999999985346-6769999999999-9999999999999998311799999 Q gi|254780967|r 310 FLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFI-NTVISTILGIIIGQSFNGTTYPITI 370 (398) Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 370 (398) T Consensus 320 lLH~~t~~l~~va~~kyI~~~f~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~ty 382 (413) T pfam01306 320 MLHMFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQGAY 382 (413) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999989999999999999986793022149999999999888998611288899970378999 |
This family is closely related to the sugar transporter family. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-22 Score=136.68 Aligned_cols=339 Identities=12% Similarity=0.047 Sum_probs=211.3 Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--- Q ss_conf 9999886576699999-----99999819998899999999999999999999999986508289999999999999--- Q gi|254780967|r 10 LMAINSLGIDIILPCL-----PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS--- 81 (398) Q Consensus 10 ~~~~~~~~~~~~~p~l-----p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~--- 81 (398) T Consensus 20 tQflgAfNDN~~K~alv~li~~~~~~~~~~~~~~l~~la~alFiLPF~Lfsa~aG~LADk~~K~~iir~~K~~Ei~im~l 99 (1139) T PRK06814 20 TQFFGAFNDNFLKNALVILILYGLSGALSKYGALLVTLANAVFILPFFILSGLAGQLADKYDKAKLIKILKFAEIGIAAL 99 (1139) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 99980888899999999999987512567654699999999999999998621656545164889999999999999999 Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 99851001101110022321001111111000123321000111122122331000111111111122221111110145 Q gi|254780967|r 82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161 (398) Q Consensus 82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f 161 (398) T Consensus 100 ~~~~~~~~~~~~l~~~lflmg~qSa~FgP~KYgiLpe~l~~~eL~~gNglve~~Tf~AIL~Gti~gg~l~~-~~~~~~~~ 178 (1139) T PRK06814 100 AIYGFHLNSVPLLFAALGLFGIHSAFFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLYTI-SGNFVILG 178 (1139) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHH T ss_conf 99999986599999999999999986608999887986591215144339999999999999999999996-58638999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC Q ss_conf 67888887777888761678864022101111---112333100000000025677788763100146888765455431 Q gi|254780967|r 162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNL---YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY 238 (398) Q Consensus 162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (398) T Consensus 179 ~~~~~-~Av~g~~~s~~ip~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~ailgiSwFW~~ga~~l~~~p~~~k~~l 257 (1139) T PRK06814 179 YSLMG-IAVLGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRLWLAILGISWFWLIGAVVLSQLPLLAKDTL 257 (1139) T ss_pred HHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999-99999999950889998899885343468999999999873917999999999999999999997099999981 Q ss_pred CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-C------------CCCHH Q ss_conf 5311-01588998865767788999998500156512468877888999999998732577-7------------64037 Q gi|254780967|r 239 QLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-P------------IHLLI 304 (398) Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~ 304 (398) T Consensus 258 ~~~~~~~~~lla~fsiGI~~GS~la~~ls~~~ie~glvp~Ga~g~~~~~~~L~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 337 (1139) T PRK06814 258 GGDENVVTLFLAVFSIGIAVGSFLCSKLLEGEITLLYVPIGALGMGIFGLDLAFASSSVPAEPTQLKSILVFLSKRHGWR 337 (1139) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH T ss_conf 89788999999999999999999999994798013300788999999999999871247788503657999971623499 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH Q ss_conf 9989989999999999999999985-346676999999999999999 Q gi|254780967|r 305 FIAFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVIS 350 (398) Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~ 350 (398) T Consensus 338 ~~~~l~~~g~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNiln~~~M 384 (1139) T PRK06814 338 ILIDLFFLAIIGGLYIVPLFAALQAWANPAHRARVIAANNVINAIFM 384 (1139) T ss_pred HHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999999974500452258998852887666787799999999999 |
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-20 Score=126.64 Aligned_cols=350 Identities=14% Similarity=0.082 Sum_probs=195.2 Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH Q ss_conf 9999999886576699999-9999981999889999999999999999999999998650-8289999999999999998 Q gi|254780967|r 7 IAMLMAINSLGIDIILPCL-PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFI 84 (398) Q Consensus 7 l~~~~~~~~~~~~~~~p~l-p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~ 84 (398) T Consensus 26 lf~tE~wERFsyYGmralL~lyl~~~Lg~s~~~A~~-i~g~f~alvYl~pi~GG~lADr~LG~r~ti~~G~il~~~G~~~ 104 (500) T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT-LFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999884998889999-9999999999999869999896104099999999999998999 Q ss_pred HHCCCC-HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 510011-011100223210011111110001233210001--11122122331000111111111122221111110145 Q gi|254780967|r 85 MVTINS-FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161 (398) Q Consensus 85 ~~~a~~-~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f 161 (398) T Consensus 105 La~~~~~~~~~~~gL~lI~vG~G~~KpnisslvG~lY~~~d~rrD~~FtiFYmgINiGafla~ll~g-~l~~~~G~~~gF 183 (500) T PRK09584 105 VAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP-WLAAKYGWSVAF 183 (500) T ss_pred HHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHH T ss_conf 9723563789999999999555346765778887605899633224422899999899999999999-999873616789 Q ss_pred HHHHHHHHHHHHHHHH---HCCCCCCHHHHCCCCCCCCCC---------------------------------------- Q ss_conf 6788888777788876---167886402210111111233---------------------------------------- Q gi|254780967|r 162 VCMGVITTFITLWYYI---RFPETLDPRDVRPLNLYAILH---------------------------------------- 198 (398) Q Consensus 162 ~~~~~~~~~~~~~~~~---~~pet~~~~~~~~~~~~~~~~---------------------------------------- 198 (398) T Consensus 184 ~~a~igM~igli~f~~~~k~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (500) T PRK09584 184 ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE 263 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98999999999999997887425788867453015689999999999999999997304899999999999999999999 Q ss_pred --CCCCCCCCCHHHHHHHHHHHHHHCCHH-HHH--HHHHHHHHH------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf --310000000002567778876310014-688--876545543------153110158899886576778899999850 Q gi|254780967|r 199 --SFSLIFKHRASTLYNIANSLTMGAILG-FVN--SSQQIYVGI------YQLGNLFPIAFAVGGFAMSIASFINSRLVE 267 (398) Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (398) T Consensus 264 ~~~~~~~er~r~-~~~-~il~~~~ivFw~~y~Q~~ssl~lfa~~~vd~~l~g~~ip~~~fqslNpl~IiilaPl~a~lw~ 341 (500) T PRK09584 264 AFAMKGAARRKM-IVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN 341 (500) T ss_pred HCCCCHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 704788998358-999-999999999999999834899999998334212773217899988727999998999999999 Q ss_pred CCCCCCHH--HHHHHHHHHHHH--HHHHHH--HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH Q ss_conf 01565124--688778889999--999987--325777640379989989999999999999999985346-67699999 Q gi|254780967|r 268 KFGIRRVS--HYSLLIFFMITG--SWLLVQ--ITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASS 340 (398) Q Consensus 268 r~~~~~~~--~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~ 340 (398) T Consensus 342 ~lg~~~~~p~KfaiG~~l~gl~F~vl~~~~~~~~~~g~vs~~Wlv~~Y~l~tigEL~lSPvGLS~vtklAP~~~~s~mMG 421 (500) T PRK09584 342 KMGDTLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMG 421 (500) T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH T ss_conf 81777883699999999999999999999986267884068999999999999999975899999998785999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999999 Q gi|254780967|r 341 IFGFINTVISTILGIIIGQS 360 (398) Q Consensus 341 l~~~~~~~~~~~~~~~~g~~ 360 (398) T Consensus 422 ~wfls~a~gn~lag~ia~~~ 441 (500) T PRK09584 422 SWFLTTAGAALIAGYVAGLM 441 (500) T ss_pred HHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999986 |
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-21 Score=132.01 Aligned_cols=334 Identities=14% Similarity=0.105 Sum_probs=188.2 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCC------HHH Q ss_conf 999999819998899999999999999999999999986----5082899-99999999999998510011------011 Q gi|254780967|r 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINS------FTG 93 (398) Q Consensus 25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~------~~~ 93 (398) T Consensus 30 ~~fyTdv~Gl~~~~~g-~i~~i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~g~i~~~i~~~llf~~~~~~~~~~~~~ 108 (473) T PRK10429 30 MYYYTDVVGLSVGLVG-TLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSIVLFLLFSAHLFEGTAQIVF 108 (473) T ss_pred HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH T ss_conf 9999986198899999-999999999993433332501068998888458998898999999999974878650699999 Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCC-----CCCCCCCC--CCCCCCCHHHHHHH Q ss_conf 100223210011111110001233210-00111122122331000111111-----11112222--11111101456788 Q gi|254780967|r 94 MLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILA-----PSIGQATV--ALSGGWIGIFVCMG 165 (398) Q Consensus 94 l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~ig-----p~ig~~l~--~~~~gWr~~f~~~~ 165 (398) T Consensus 109 ~~~~yil~~~~yT~~~vPy~aL~~elT~D~~ERt~l~~~R~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~g~~~~~~i~~ 187 (473) T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVN-YVGGGDRGFGFQMFTLVLI 187 (473) T ss_pred HHHHHHHHHHHHHHEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHH T ss_conf 999999999999841563000003430688889999999999999999999999999996-6069856589999999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC Q ss_conf 888777788876167886402210--111111233310000000002567778876310014688876545543153110 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVR--PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL 243 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (398) T Consensus 188 ~i~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~l~~N~~~~~l~~~~l~~~~~~~i~~~~~~Yy~~y~lg~~~~ 267 (473) T PRK10429 188 AFFIVSTIVTLRNVHEVYSSDNGVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL 267 (473) T ss_pred HHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH T ss_conf 99999999999702012455445555556878999999997265999999999999999999999999999999078889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 15889988657677889999985001565124688778889999999987325777640379989989999999999999 Q gi|254780967|r 244 FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF 323 (398) Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398) T Consensus 268 ~~~~~~~~~i~~ii~~~~~~~l~kk~gKk~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~i~~~~~~~g~~~~~~l~ 345 (473) T PRK10429 268 FPYYLSYAGAANLVTLILFPRLVKLLSRRILWAGASIFPVLSCGVLLLMALAA--PHNALLIVLAGILLNIGTALFWVLQ 345 (473) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999997289999999999999999999999805--0049999999999999888999999 Q ss_pred HHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999985-------346-676999999999999999999999999983 Q gi|254780967|r 324 SSISME-------PFS-HLAGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 324 ~~~~~~-------~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 346 ~sm~aDvvDy~E~ktG~R~eG~~~s~~sf~~K~~~al~~~i~g~~L~ 392 (473) T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIAVVLG 392 (473) T ss_pred HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99831500388988288418799999999999999999999999999 |
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-20 Score=128.51 Aligned_cols=328 Identities=13% Similarity=0.142 Sum_probs=187.3 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHH-HHHHHHHHHHHHHHHHCCCCH------HH Q ss_conf 9999998199988999999999999999999999999865----082899-999999999999985100110------11 Q gi|254780967|r 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR----FGRKIV-MMFGLVIHIISTFIMVTINSF------TG 93 (398) Q Consensus 25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr----~Grr~~-l~~g~~~~~i~~~~~~~a~~~------~~ 93 (398) T Consensus 31 ~~fyt~v~Gl~~~~vg-~i~~i~ri~Dai~DPliG~lsDrt~tr~Grrrp~il~~~ip~~l~~~llf~~p~~~~~~~~~~ 109 (442) T PRK09669 31 AYFYTDVFGLSAAIMG-TMFLLVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCMLTFYTPDFSETGKIIY 109 (442) T ss_pred HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH T ss_conf 9999986097899999-999999999993522341134268998766139999999999999999995788883089999 Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCCCCCCCCCC---C---CCCCCCHHHHHHHH Q ss_conf 100223210011111110001233210-0011112212233100011111111112222---1---11111014567888 Q gi|254780967|r 94 MLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILAPSIGQATV---A---LSGGWIGIFVCMGV 166 (398) Q Consensus 94 l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~---~---~~~gWr~~f~~~~~ 166 (398) T Consensus 110 ~~~~~~l~~~~~T~~~iPy~aL~~elt~d~~eRt~l~~~r~~~~~~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 189 (442) T PRK09669 110 ACVTYILLTLVYTAINVPYCAMPGVITNDPKERHSLQSWRFALSTAGGLIVSGIALPLVDWIGKGDEQKGYFGAMCVMGL 189 (442) T ss_pred HHHHHHHHHHHHHHEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH T ss_conf 99999999999887001335402110688889999999999999999999999999999871786243499999999999 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH Q ss_conf 88777788876167886402210111111233310000000002567778876310014688876545543153110158 Q gi|254780967|r 167 ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPI 246 (398) Q Consensus 167 ~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398) T Consensus 190 i~~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~~~~~ 266 (442) T PRK09669 190 LGVVLFFVCFFTTKERYTFEVQ---PQSSVLKDLKLLLANSQWRILFAFNVVLLTAVVVRGGATLYYVKYVMGRPDLATL 266 (442) T ss_pred HHHHHHHHHHCCCCCCCCCCCC---CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH T ss_conf 9999999996044356687666---7744999999998561999999999999999999976899999999077779999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89988657677889999985001565124688778889999999987325777640379989989999999999999999 Q gi|254780967|r 247 AFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI 326 (398) Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (398) T Consensus 267 ~~~~~~~~~i~~~~~~~~l~~k~gk~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~l~g~~~~~~~~l~~sm 341 (442) T PRK09669 267 FLVYGMIANMFGALLSSRLLGRFDRVKAFKWIIIAYSVLSALIF---FIPAE--NIALIFALNILFLFVQNTTTPLQWSM 341 (442) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999996589999999999999999999---95752--39999999999999999999989998 Q ss_pred H---HHH----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9---853----46-67699999999999999999999999998 Q gi|254780967|r 327 S---MEP----FS-HLAGTASSIFGFINTVISTILGIIIGQSF 361 (398) Q Consensus 327 ~---~~~----~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~ 361 (398) T Consensus 342 ~aDviD~~e~~tG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L 384 (442) T PRK09669 342 ASDVVDYEESRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 384 (442) T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7758887786039985029999999999999999999999999 |
|
| >TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-20 Score=129.18 Aligned_cols=330 Identities=11% Similarity=0.111 Sum_probs=228.1 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCC-CCHHHHCCCCCC Q ss_conf 9999998199988999999999999999999999999865082899999999999999985---100-110111002232 Q gi|254780967|r 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTI-NSFTGMLCMRLI 100 (398) Q Consensus 25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~---~~a-~~~~~l~~~r~l 100 (398) T Consensus 41 LSpfl~~~Gls~~~sa-s~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~g~aaFivfg~~h~nyp~~l~~Y~~ 119 (411) T TIGR00897 41 LSPFLVELGLSVQQSA-SLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVVGSAAFIVFGLEHLNYPLLLLFYAI 119 (411) T ss_pred HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 3289996188887899-999999999999988888999864221678999999999999999986888889999998888 Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC Q ss_conf 1001111111000123321000111122122331000111-111111122221111110145678888877778887616 Q gi|254780967|r 101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMP-ILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRF 179 (398) Q Consensus 101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~-~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~ 179 (398) T Consensus 120 rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaip-afGe~nTLWsal~fv~~Gg~~AL~~~ 198 (411) T TIGR00897 120 RGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIP-AFGELNTLWSALLFVLTGGVLALFIN 198 (411) T ss_pred HHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 84021788887672220212411003317899999997465430122012555-30323468999999999899999987 Q ss_pred CCCCCHHHHC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHH Q ss_conf 7886402210----1111112333100000000025677788763100146888765455431531101-5889988657 Q gi|254780967|r 180 PETLDPRDVR----PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF-PIAFAVGGFA 254 (398) Q Consensus 180 pet~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 254 (398) T Consensus 199 kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN~ig~fGFavflPmm~~a~~G~StseWLQiWg~~Ff~ 278 (411) T TIGR00897 199 KDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIINTIGLFGFAVFLPMMFLAELGFSTSEWLQIWGTLFFT 278 (411) T ss_pred HHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 52058066524666700677740000201078400002788776132213467635899976387402589999999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 67788999998500156512468-87788899999999873257776403799899899999999999999999853466 Q gi|254780967|r 255 MSIASFINSRLVEKFGIRRVSHY-SLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSH 333 (398) Q Consensus 255 ~~~~~~~~~~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398) T Consensus 279 nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P--~~~Ghs~av~~iia~~~G~~lAgy-VPl~A~~Ptlapk 355 (411) T TIGR00897 279 NIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIP--QFIGHSFAVVLIIAIIYGILLAGY-VPLAAVLPTLAPK 355 (411) T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCC T ss_conf 9999999975414468731667637645899999998656--652258999999999999999866-3488742234899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 769999999999999999999999999 Q gi|254780967|r 334 LAGTASSIFGFINTVISTILGIIIGQS 360 (398) Q Consensus 334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~ 360 (398) T Consensus 356 ~KGAA~SVlNL~a-GlsaF~aPaia~l 381 (411) T TIGR00897 356 DKGAAMSVLNLSA-GLSAFVAPAIAVL 381 (411) T ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHH T ss_conf 8731564888886-2887888999999 |
The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane. |
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease; InterPro: IPR012707 Among the different families of transporter only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-22 Score=136.57 Aligned_cols=332 Identities=16% Similarity=0.169 Sum_probs=237.5 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC Q ss_conf 99999819998899999999999999999999999986508289999999999999998510011011100223210011 Q gi|254780967|r 26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG 105 (398) Q Consensus 26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~ 105 (398) T Consensus 32 ltmG~dlGl~~tmfG-la~tlfy~~yv~~GiPsn~ml~~~GarrWia~imv~WGiast~tmfat~P~~ly~lr~lvGi~e 110 (412) T TIGR02332 32 LTMGKDLGLSATMFG-LAATLFYVAYVIFGIPSNIMLAKVGARRWIATIMVLWGIASTATMFATSPESLYLLRILVGIAE 110 (412) T ss_pred HHHCCHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 221001003688999-9999999999986262789998863578988999987567665543057417888999987642 Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 1111100012332100011112212233100011111111112222111-----11101456788888777788876167 Q gi|254780967|r 106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-----GGWIGIFVCMGVITTFITLWYYIRFP 180 (398) Q Consensus 106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-----~gWr~~f~~~~~~~~~~~~~~~~~~p 180 (398) T Consensus 111 aGflPGil~ylt~WfPay~raranalfm~amPvt~~lG~i~sGyil~ldG~~~lkGWqWlflleG~Psv~lGv~~Wf~l~ 190 (412) T TIGR02332 111 AGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGLILSGYILALDGLMALKGWQWLFLLEGLPSVLLGVVVWFYLD 190 (412) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC T ss_conf 00225799999986346777677788788878999988898779999877876201467777722168998988876404 Q ss_pred CCCCHHHHCCCCCCCC--------------------------CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH Q ss_conf 8864022101111112--------------------------33310000000002567778876310014688876545 Q gi|254780967|r 181 ETLDPRDVRPLNLYAI--------------------------LHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY 234 (398) Q Consensus 181 et~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398) T Consensus 191 d~Pd~a~Wl~~~~k~~l~~m~~~~~l~l~~p~ga~~h~~~~~rs~~re~~-tP~~m~ytlayfCltntlsai~iWtPqil 269 (412) T TIGR02332 191 DSPDKAKWLDKEEKKALKEMIDRERLTLVSPEGAIAHAAVQQRSTLREVL-TPVVMLYTLAYFCLTNTLSAISIWTPQIL 269 (412) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 88503354105678999999742022121430245565566556788987-78999999999998766766643124788 Q ss_pred HHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH Q ss_conf 54315311--0158899886576778899999850015651246887788899999999873257776403799899899 Q gi|254780967|r 235 VGIYQLGN--LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA 312 (398) Q Consensus 235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (398) T Consensus 270 qsfn~Gssni~iGllaa~Pq~Cti~Gm~~Wsr~sdr~~er~~ht--~lPylfaaaGWllasatdh~~iq~-~~iimas~G 346 (412) T TIGR02332 270 QSFNTGSSNITIGLLAAVPQICTILGMVYWSRRSDRLKERKKHT--ILPYLFAAAGWLLASATDHSLIQL-LSIIMASTG 346 (412) T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC T ss_conf 87404632678889976778999987787410034566544310--136899888888875300469999-999986200 Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999999998534-6676999999999999999999999999983117 Q gi|254780967|r 313 SFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398) Q Consensus 313 ~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398) T Consensus 347 sf~am~if---WttPdq~isl~~ra~~~avina~Gn~Gsa~sP~~iG~lkd~tG 397 (412) T TIGR02332 347 SFSAMAIF---WTTPDQVISLRARAVAIAVINAVGNVGSALSPLLIGILKDLTG 397 (412) T ss_pred HHHHHHHE---ECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC T ss_conf 24443210---2077621211244545444341032124677999999874024 |
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients , . This entry represents a group of MFS proteins encoded in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterised as 4-HPA permease in Escherichia coli, where 3-HPA and 3,4-dihydroxyphenylacetate, but not other substrate analogues, were shown to competitively inhibit 4-HPA transport, indicating a narrow substrate specificity .. |
| >TIGR00885 fucP L-fucose:H+ symporter permease; InterPro: IPR005275 This family describes the L-fucose permease in bacteria | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-19 Score=120.99 Aligned_cols=350 Identities=15% Similarity=0.170 Sum_probs=241.3 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 93899999999998865766999999999981999889999999999999999999999998650828999999999999 Q gi|254780967|r 1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398) Q Consensus 1 ~~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398) T Consensus 3 iPF~LitSl-FaLWg~ANditnpmv~~Fq~~f~~~a~~aa-LvQ~AFYgGYf~~aiPAa~f~~k~SYKAGillGL~LYA~ 80 (427) T TIGR00885 3 IPFVLITSL-FALWGFANDITNPMVKAFQKVFELTAFEAA-LVQVAFYGGYFIMAIPAALFIKKLSYKAGILLGLALYAL 80 (427) T ss_pred CHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 316999989-999988750021579999988406554202-666667620123565589999873468889998999999 Q ss_pred HHHHHH---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-- Q ss_conf 999851---001101110022321001111111000123321000111122122331000111111111122221111-- Q gi|254780967|r 81 STFIMV---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG-- 155 (398) Q Consensus 81 ~~~~~~---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~-- 155 (398) T Consensus 81 GAfLFwPAa~~~~y~~FLv~lfIlt~GL~fLET~aNPyil~mG~e~tatrRLNlAQsFNp~Gsi~g~~va~~lil~nl~~ 160 (427) T TIGR00885 81 GAFLFWPAAEIEEYTLFLVGLFILTAGLGFLETAANPYILVMGDEETATRRLNLAQSFNPLGSIIGMVVAQQLILSNLES 160 (427) T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 88863137752351279999999996266664242863761278884210222563021578999999998988632887 Q ss_pred ----------------------------CCCHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC Q ss_conf ----------------------------11014567888887777888-7616788640221011111123331000000 Q gi|254780967|r 156 ----------------------------GWIGIFVCMGVITTFITLWY-YIRFPETLDPRDVRPLNLYAILHSFSLIFKH 206 (398) Q Consensus 156 ----------------------------gWr~~f~~~~~~~~~~~~~~-~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~ 206 (398) T Consensus 161 ~~~D~~Gnlif~~ls~~e~~aik~sdla~~~~PY~iig~vvlav~llI~l~K~Pa~-qsDn~~~a~qisF~~~lsRla~~ 239 (427) T TIGR00885 161 QSQDVLGNLIFDKLSEEELSAIKESDLASVRTPYLIIGLVVLAVLLLIRLTKMPAL-QSDNHEDAKQISFSASLSRLARK 239 (427) T ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHH T ss_conf 66425787898842978888864655766612389999999999999854137742-25772003465505899999864 Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHH-----HHCCCCCC----HHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHH Q ss_conf 00025677788763100146888765455-----43153110----15889-9886576778899999850015651246 Q gi|254780967|r 207 RASTLYNIANSLTMGAILGFVNSSQQIYV-----GIYQLGNL----FPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSH 276 (398) Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 276 (398) T Consensus 240 ~~yRegViAQffYVGvQi~CWtfii~Ya~rl~~~~~~G~~~~saevlsqqy~i~aMviF~isRFi~T~l~~yl~a~k~L~ 319 (427) T TIGR00885 240 RKYREGVIAQFFYVGVQIMCWTFIIQYAVRLIFGKTAGFAAKSAEVLSQQYNIVAMVIFIISRFIGTFLLKYLAAEKLLM 319 (427) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH T ss_conf 24689999999998789999999999765614784320013457888753456678777667889999998628658999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH Q ss_conf 88778889999999987325777640379989989999999999999999985346676--9999999999999999999 Q gi|254780967|r 277 YSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLA--GTASSIFGFINTVISTILG 354 (398) Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~a~~l~~~~~~~~~~~~~ 354 (398) T Consensus 320 ~~----Ai~g~~~~Lg~iF~~g----~~GLycL~l~SafMsl~fPTIygialkglg~d~k~Gaa-glv--MaI~GG~~~p 388 (427) T TIGR00885 320 LY----AIIGMLLILGSIFLDG----VVGLYCLVLVSAFMSLMFPTIYGIALKGLGEDTKYGAA-GLV--MAIIGGGILP 388 (427) T ss_pred HH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH-HHH--HHHHHHHHCC T ss_conf 99----9999999999999802----48999999997321032246899985146400001057-899--9886103201 Q ss_pred HHHHHHHHHH Q ss_conf 9999998311 Q gi|254780967|r 355 IIIGQSFNGT 364 (398) Q Consensus 355 ~~~g~~~~~~ 364 (398) T Consensus 389 Pl~g~iiD~~ 398 (427) T TIGR00885 389 PLQGFIIDQK 398 (427) T ss_pred CHHHEEECHH T ss_conf 0140422337 |
L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by at least four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. . |
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-19 Score=121.41 Aligned_cols=329 Identities=12% Similarity=0.080 Sum_probs=177.3 Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCC------HH Q ss_conf 9999999819998899999999999999999999999986----5082899-99999999999998510011------01 Q gi|254780967|r 24 CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINS------FT 92 (398) Q Consensus 24 ~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~------~~ 92 (398) T Consensus 32 l~~fytdv~Gl~~~~~g~-i~~i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~gaip~~l~~~llf~~P~~s~~~~~~ 110 (460) T PRK11462 32 MMFFYTDIFGIPAGFVGT-MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460) T ss_pred HHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH T ss_conf 999999960978999999-9999999999243500463016899988836678688899999999996288878118999 Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCCCCCCCCCC------CCCCCCCHHHHHHH Q ss_conf 1100223210011111110001233210-0011112212233100011111111112222------11111101456788 Q gi|254780967|r 93 GMLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILAPSIGQATV------ALSGGWIGIFVCMG 165 (398) Q Consensus 93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~------~~~~gWr~~f~~~~ 165 (398) T Consensus 111 y~~v~y~l~~~~yT~~~iPy~aL~~elT~d~~ERt~l~~~R~~~~~~g~~~~~~~~~~lv~~~g~~~~~~g~~~~~~v~~ 190 (460) T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH T ss_conf 99999999999988645368752478648999999999999999999999999999999999669843789999999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH Q ss_conf 88877778887616788640221011111123331000000000256777887631001468887654554315311015 Q gi|254780967|r 166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFP 245 (398) Q Consensus 166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (398) T Consensus 191 vi~~i~~~~~~~~~ke~~~~~----~~~~s~~~~l~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~yy~~y~lg~~~~~~ 266 (460) T PRK11462 191 VVAFMMLAFCFFTTKERVEAP----PTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFV 266 (460) T ss_pred HHHHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH T ss_conf 999999999995220366688----6642399999999738389999999999999999999998888863168789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 88998865767788999998500156512468877888999999998732577764037998998999999999999999 Q gi|254780967|r 246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS 325 (398) Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (398) T Consensus 267 ~~~~~~~i~~li~~~l~~~l~~~~~k~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~g~~~~~~~~l~~a 341 (460) T PRK11462 267 AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMF---FVPMQA--SITMFVFIFVIGVLHQLVTPIQWV 341 (460) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCH--HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999999999999999999999999---965332--999999999999999999999999 Q ss_pred HHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99853-------46-676999999999999999999999999983 Q gi|254780967|r 326 ISMEP-------FS-HLAGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 326 ~~~~~-------~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 342 m~aDvvDy~e~ktG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~ 386 (460) T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 866587777887198618999999999999999999999999999 |
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.5e-19 Score=119.87 Aligned_cols=330 Identities=19% Similarity=0.216 Sum_probs=202.1 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCCH------HHH Q ss_conf 99999819998899999999999999999999999986----5082899-999999999999985100110------111 Q gi|254780967|r 26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINSF------TGM 94 (398) Q Consensus 26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~~------~~l 94 (398) T Consensus 37 ~fYTdv~Gis~~~aG~iflv~R-iiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467) T COG2211 37 FFYTDVFGLSAALAGTIFLVAR-IIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467) T ss_pred HHHHCCCCCCHHHHHHHHHHHH-HHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH T ss_conf 9996115875899999999999-999974441126530455656461189998867999999999808884556424899 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCC-----CCCCCCCCCCC--CCCCCHHHHHHHH Q ss_conf 00223210011111110001233210-0011112212233100011111-----11111222211--1111014567888 Q gi|254780967|r 95 LCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPIL-----APSIGQATVAL--SGGWIGIFVCMGV 166 (398) Q Consensus 95 ~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~i-----gp~ig~~l~~~--~~gWr~~f~~~~~ 166 (398) T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv-~~~g~~~~~~g~~~~~~~~~v 194 (467) T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV-KLFGGGDKALGYQGTALVLGV 194 (467) T ss_pred HHHHHHHHHHHHHEECCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHH T ss_conf 9999999999983117253146443399888788998999999899999999999999-880898510409999999999 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH Q ss_conf 8877778887616788640221011-111123331000000000256777887631001468887654554315311015 Q gi|254780967|r 167 ITTFITLWYYIRFPETLDPRDVRPL-NLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFP 245 (398) Q Consensus 167 ~~~~~~~~~~~~~pet~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (398) T Consensus 195 i~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~ 274 (467) T COG2211 195 IGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFA 274 (467) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHH T ss_conf 99999999998750566766667653344388899999726469999999999999999985652215888758718899 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -8899886576778899999850015651246887788899999999873257776403799899899999999999999 Q gi|254780967|r 246 -IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS 324 (398) Q Consensus 246 -~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (398) T Consensus 275 ~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~---~--~~~~~l~~~~~~i~~~g~~~~~~l~w 349 (467) T COG2211 275 YLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT---P--AGSVVLIVVALIIAGVGTGIANPLPW 349 (467) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---C--CCCHHHHHHHHHHHHHHHHCCCCCCH T ss_conf 999999999999999868999999562999999999999999899851---6--76168999999999986632244328 Q ss_pred HHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99985-------346-676999999999999999999999999983 Q gi|254780967|r 325 SISME-------PFS-HLAGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 325 ~~~~~-------~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 350 am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467) T COG2211 350 AMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467) T ss_pred HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8722414488887278702467899999999999999999999999 |
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-17 Score=112.05 Aligned_cols=325 Identities=14% Similarity=0.128 Sum_probs=163.2 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHHH-HHHHHHHHHHHHHHHCCC-----C--HH Q ss_conf 999999819998899999999999999999999999986----50828999-999999999999851001-----1--01 Q gi|254780967|r 25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIVM-MFGLVIHIISTFIMVTIN-----S--FT 92 (398) Q Consensus 25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~l-~~g~~~~~i~~~~~~~a~-----~--~~ 92 (398) T Consensus 32 ~~fyTdv~Gl~~~~vG~-i~~i~ri~DAvtDPl~G~lsDrt~tr~GrrrP~il~g~ip~~i~~~llf~~P~~~~~~~~~~ 110 (457) T PRK09848 32 LSYYTDVAGVGAAAAGT-MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (457) T ss_pred HHHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH T ss_conf 99999861988999999-99999999993345005741069999888249999999999999999995775546308999 Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCC-----CCCCCCCCCCCCCCCCCHHHH---- Q ss_conf 1100223210011111110001233210-001111221223310001111-----111111222211111101456---- Q gi|254780967|r 93 GMLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPI-----LAPSIGQATVALSGGWIGIFV---- 162 (398) Q Consensus 93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~-----igp~ig~~l~~~~~gWr~~f~---- 162 (398) T Consensus 111 ~~~~~yi~~~~~~T~~~iPy~aL~~elT~d~~eRt~l~~~r~i~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 187 (457) T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS---PEEMVSVYHFWTI 187 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHH T ss_conf 9999999999999999846976371307999999999999999999999999999999862568---6007899999999 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC Q ss_conf 78888877778887616788640221011111123331000000000256777887631001468887654554315311 Q gi|254780967|r 163 CMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN 242 (398) Q Consensus 163 ~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (398) T Consensus 188 i~~i~~~~~~~~~~~~~~e~~~~~~----~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~ 263 (457) T PRK09848 188 VLAIAGMVLYFICFKSTRENVVRIV----AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTG 263 (457) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC----CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH T ss_conf 9999999999998535335644435----686589999999837689999999999999999999999999999937866 Q ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 01588998-86576778899999850015651246887788899999999873257776403799899899999999999 Q gi|254780967|r 243 LFPIAFAV-GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS 321 (398) Q Consensus 243 ~~~~~~~~-~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398) T Consensus 264 ~~~~~~~~~~~v~~i~~~p~~~~l~~r~gKk~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~i~~~g~~~~~~ 338 (457) T PRK09848 264 LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYL---LFFWVSVW--SLPVALVALAIASIGQGVTMT 338 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH--HHHHHHHHHHHHHHHHHHHHH T ss_conf 8999999999999999999999999996679999999999999999---99996343--599999999999999989999 Q ss_pred HHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999853-------46-676999999999999999999999999983 Q gi|254780967|r 322 NFSSISMEP-------FS-HLAGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 322 ~~~~~~~~~-------~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 339 ~~~sm~aDv~Dy~e~~tG~r~eG~~~s~~sf~~K~~~a~~~~i~g~~L~ 387 (457) T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (457) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999962266789996099704599999999999999999999999999 |
|
| >pfam03209 PUCC PUCC protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-17 Score=112.10 Aligned_cols=352 Identities=14% Similarity=0.091 Sum_probs=192.9 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHH-HHHHHHHHHHHHHHHHCC-----CC------ Q ss_conf 999819998899999999999999999999999986508-----2899-999999999999985100-----11------ Q gi|254780967|r 28 ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-----RKIV-MMFGLVIHIISTFIMVTI-----NS------ 90 (398) Q Consensus 28 i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-----rr~~-l~~g~~~~~i~~~~~~~a-----~~------ 90 (398) T Consensus 6 MIvEL~~pA~lv~-~lval~~lv-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~a~~a~~~l~~~~~~~~~ 83 (402) T pfam03209 6 MIVELAVPASLVG-IMIALPLLV-APFRALIGFRSDTHRSALGWKRTPYIWLGTLLQAGGLAIMPFALIVLSGQGEAVGA 83 (402) T ss_pred HHHHHCHHHHHHH-HHHHHHHHH-HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 7997122789999-999999999-99999975452577666878862678998999999999999999998567422333 Q ss_pred -HH----HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH- Q ss_conf -01----110022321001111111000123321000111122122331000111111111122221111110145678- Q gi|254780967|r 91 -FT----GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM- 164 (398) Q Consensus 91 -~~----~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~- 164 (398) T Consensus 84 ~~~~g~~~a~laF~l~Glgv~a~~T~~lALlad~t~e~~R~~~v~i~w~Mli~G~ivtA~i~g~lL~~fs~~rLi~v~~~ 163 (402) T pfam03209 84 PTWAGLILAALAFLLVGLGVHMSQTVGLALATDLADEEDRPKVVGLMYVMLLVGIIVSAITVGWLLADFSPARLIQVIQG 163 (402) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH T ss_conf 15999999999999996566275578999998538865669999999999999999999999997564699999999999 Q ss_pred -HHHHHHHHHHHHHHCCCCCCHHHH--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC Q ss_conf -888877778887616788640221--01111112333100000000025677788763100146888765455431531 Q gi|254780967|r 165 -GVITTFITLWYYIRFPETLDPRDV--RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241 (398) Q Consensus 165 -~~~~~~~~~~~~~~~pet~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398) T Consensus 164 ~a~i~~~l~~~A~wg~-E~r~~~~~~~~~~~~~~f~~a~~~~~~~p~ar~F~~fv~l~~la~~mQD~iLEPygg~VFGms 242 (402) T pfam03209 164 VALATMVLNVIALWKQ-EARRPSRPREEPRPEPSFLEAWLLFVAEPQARRFLFFLGLGTLAFFMQDVLLEPYGGEVFGLT 242 (402) T ss_pred HHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC T ss_conf 9999999999998356-667755456777789659999999983987300277999999999842012476402560778 Q ss_pred C-CHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 1-01588998865767788999998-500156512468877888999999998732577764037998998999999999 Q gi|254780967|r 242 N-LFPIAFAVGGFAMSIASFINSRL-VEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI 319 (398) Q Consensus 242 ~-~~~~~~~~~~~~~~~~~~~~~~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (398) T Consensus 243 v~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~~li~a~~~----~~~~~l~~~v~l~G~g~G~f 318 (402) T pfam03209 243 VGETTKLTAFFAGGTLVGFGLAGRVLSRGLDPFRMAGWGCAVGLPAFLALIFSALL----GNVALFVAGTLLIGFGAGLF 318 (402) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHCCHHH T ss_conf 65769999999889999999999998657775889999999999999999998743----65138999999999702188 Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999998534-6676999999999999999999999999983-------117999999999999999999999 Q gi|254780967|r 320 NSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFN-------GTTYPITIGFFGIAVSSFICILIV 386 (398) Q Consensus 320 ~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 386 (398) T Consensus 319 ~v~al~~mM~la~~~~aG~~mG~WGaaQA~A~Glg~~~Gg~~~Dl~~~l~~~~~~aY~~VF~lEa~l~~~a~~ll 393 (402) T pfam03209 319 GHATLTAMMDLAPEERAGTALGAWGAAQATAAGLAILLGGVLRDLVRALAGNPATAYGLVFALEALLLIITIFVL 393 (402) T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999998168876415898797999999979999999999999998616975278999999999999999997 |
This protein is required for high-level transcription of the PUC operon. |
| >KOG2816 consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-17 Score=109.40 Aligned_cols=335 Identities=16% Similarity=0.189 Sum_probs=186.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH Q ss_conf 65766999999999981999889999999999----99999999999999865082899999999999999985100110 Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFY----LIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF 91 (398) Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~----~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~ 91 (398) T Consensus 36 l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-- 113 (463) T KOG2816 36 LSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-- 113 (463) T ss_pred HCCCHHHHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- T ss_conf 377203445555431136555421201321102231367899889988887787778988999999987668867878-- Q ss_pred HHHCCCCCCCCCCCC--CCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 111002232100111--111100012332100011112212233100011111111112222111111014567888887 Q gi|254780967|r 92 TGMLCMRLIQGIGGA--APRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT 169 (398) Q Consensus 92 ~~l~~~r~l~G~g~~--~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~ 169 (398) T Consensus 114 ~~~~~---~~~l~G~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-~~~~a~~f~ia~~~~~ 189 (463) T KOG2816 114 YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-FLGIALVFLIAAASGI 189 (463) T ss_pred HHHHH---HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HCCHHHHHHHHHHHHH T ss_conf 76554---1035540578767676675202117899999999999999999899987210566-4471245589999999 Q ss_pred HHHHHHHHHCCCCCCHHHHCCCCC----------CCC---CCCCCCCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHHHH Q ss_conf 777888761678864022101111----------112---3331000000000256777887631001-46888765455 Q gi|254780967|r 170 FITLWYYIRFPETLDPRDVRPLNL----------YAI---LHSFSLIFKHRASTLYNIANSLTMGAIL-GFVNSSQQIYV 235 (398) Q Consensus 170 ~~~~~~~~~~pet~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 235 (398) T Consensus 190 ~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~ 269 (463) T KOG2816 190 LSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLK 269 (463) T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE T ss_conf 99999874155434641014443344577765507777778765126877304899999999987874365203899996 Q ss_pred HHCCCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 4315311-015889988657677889999-98500156512468877888999999998732577764037998998999 Q gi|254780967|r 236 GIYQLGN-LFPIAFAVGGFAMSIASFINS-RLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS 313 (398) Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398) T Consensus 270 ~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~---~~~af-~~~~w~~~~~~v---~~~ 342 (463) T KOG2816 270 AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQL---LLFAF-ATETWMMFAAGV---VVA 342 (463) T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HHHHH-HHCCHHHHHHHH---HHH T ss_conf 10576888899999999899999999999999999743203345777999999---99998-403046689889---887 Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999-8534667699999999999999999999999998311 Q gi|254780967|r 314 FQFGLINSNFSSIS-MEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT 364 (398) Q Consensus 314 ~~~~~~~~~~~~~~-~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~ 364 (398) T Consensus 343 ~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463) T KOG2816 343 L-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463) T ss_pred H-CCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 2-04307778767875316454633124999999875365799988999998 |
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927 It has been shown that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-15 Score=103.15 Aligned_cols=334 Identities=17% Similarity=0.231 Sum_probs=210.1 Q ss_pred HHHHHHHHCCCHHHHH----HHHHHHHHH---HHHHHHHHHHHHHH------HCCC-HHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9999998199988999----999999999---99999999999986------5082-89999999999999998510011 Q gi|254780967|r 25 LPKISDSLHLSNENYG----QHLISFYLI---GYGIAQIFYGPLSD------RFGR-KIVMMFGLVIHIISTFIMVTINS 90 (398) Q Consensus 25 lp~i~~~l~~s~~~~~----~~~~s~~~~---~~~i~~~~~G~l~D------r~Gr-r~~l~~g~~~~~i~~~~~~~a~~ 90 (398) T Consensus 23 ~~fyTDv~G~~a~~~G~n~~iLiTtlflV~Ri~dAi~DP~~G~~vD~T~~I~rwGKFRPw~L~Ga~p~~~~~vL~F~~~~ 102 (470) T TIGR00792 23 LFFYTDVLGLSAAIVGANKLILITTLFLVARILDAITDPIMGLIVDRTRNITRWGKFRPWLLIGAIPFAIVLVLLFTTPD 102 (470) T ss_pred HHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCC T ss_conf 99886215684311234532678999999999999833467567524458887964330002017899999999982457 Q ss_pred HH----------HHCCCCCCCCCCCCCCCCCCHHHHHHH-HCCCCCCCCCCCCCCEECCCC-----CCCCCC---CCCC- Q ss_conf 01----------110022321001111111000123321-000111122122331000111-----111111---1222- Q gi|254780967|r 91 FT----------GMLCMRLIQGIGGAAPRIITISIIRDI-YDGRDMAKVLSIAMMIFMIMP-----ILAPSI---GQAT- 150 (398) Q Consensus 91 ~~----------~l~~~r~l~G~g~~~~~~~~~a~i~~~-~~~~~~~~~~~~~~~~~~~g~-----~igp~i---g~~l- 150 (398) T Consensus 103 ~~~~~n~~~~~v~a~~tYi~~g~~Ys~~niPy~sl~p~~T~d~~ER~~l~~~r~~~a~~G~~~~~~~~~P~~~~~~~~~~ 182 (470) T TIGR00792 103 FSATGNPIGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGISA 182 (470) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 55431177899999999999846622101362103543257831002120187899999999999999999986066546 Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH Q ss_conf -211111101456788888777788876167886--40221011111123331000000000256777887631001468 Q gi|254780967|r 151 -VALSGGWIGIFVCMGVITTFITLWYYIRFPETL--DPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV 227 (398) Q Consensus 151 -~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (398) T Consensus 183 ~~~~~~G~~~~~~i~~~~g~~~~~~c~~~tkE~~~~~~~~~~~~~~~~~~~~~~~l~~N~qL~~l~~~~l~~~~a~~i~~ 262 (470) T TIGR00792 183 GEDDKLGWFMFALILALIGVVLLIICFFGTKERVSVSEIPKKSEKKLSLKKIFKALFKNDQLLILCLAYLFYLLAFNIKN 262 (470) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 88885058999999999999999987167732131033211356778689999998528889999999999999999876 Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH Q ss_conf 887654554315311015889988-6576778899999850015651246887788899999999873257776403799 Q gi|254780967|r 228 NSSQQIYVGIYQLGNLFPIAFAVG-GFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI 306 (398) Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (398) T Consensus 263 ~~~~YYf~Yvlg~~~lf~~~~~~~~~~~~l~~~~l~P~l~k~~grk~~~~~~~~~~~~g~l~~~~~~~A----~~~~~~~ 338 (470) T TIGR00792 263 GVQVYYFTYVLGDPELFSILGLIAFIGAGLIGVLLFPRLVKKFGRKRLFLIGILLMVLGLLILFFVGKA----SNLPLIL 338 (470) T ss_pred HHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH T ss_conf 563023457746678999999999999999999878778876125999999999999999999873167----7999999 Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHHH--HHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89989999999999999999----9853--4667------6999999999999999999999999983 Q gi|254780967|r 307 AFFFLASFQFGLINSNFSSI----SMEP--FSHL------AGTASSIFGFINTVISTILGIIIGQSFN 362 (398) Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~------~G~a~~l~~~~~~~~~~~~~~~~g~~~~ 362 (398) T Consensus 339 ~~~~~~~~~~~~~~~~~w~~~vi~~~D~VdYGE~k~G~R~Eg~~~S~~~f~~K~G~A~~g~~~G~~L~ 406 (470) T TIGR00792 339 VLIIIAGFGQNFVTGLVWALQVIMVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 406 (470) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999988776778987888864420232210201485507999999999999988998999999999 |
This collection of sequences represents the sodium: galactoside symporter family (SGF). Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane. |
| >pfam03092 BT1 BT1 family | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.6e-15 Score=99.08 Aligned_cols=333 Identities=11% Similarity=0.030 Sum_probs=177.8 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHCC----CCHHH Q ss_conf 9999999981999889999999999999999999999998650-----82899999999999999985100----11011 Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIVMMFGLVIHIISTFIMVTI----NSFTG 93 (398) Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~l~~g~~~~~i~~~~~~~a----~~~~~ 93 (398) T Consensus 11 a~~~~~kd~~~~spa~~q-~~~~i~~lPW~i-Kpl~G~lSD~~Pi~GyrRr~Yl~l~~~l~~~~~l~la~~~~~~~s~~~ 88 (425) T pfam03092 11 STQFMLKDRLGIDPARYQ-RLSGLATLPWVI-KPFTGVLSDGFALFGYRRRPYLALSGLLGGAFALSYGLLPAKESSAAV 88 (425) T ss_pred HHHHHHHHHCCCCHHHHH-HHHHHHHCCHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH T ss_conf 888998853198999999-999999662899-888999761320157754499999999999999999982377542999 Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH |