peg_804

peg_804

GeneID in NCBI database:Locus tag:
Protein GI in NCBI database:not defined in NCBI databaseProtein Accession:
Gene range:-(864181, 864300)Protein Length:39aa
Gene description:
COG prediction:none
KEGG prediction:not defined in KEGG
SEED prediction:hypothetical protein
Pathway involved in KEGG:not defined
Subsystem involved in SEED:- none -
sequencesequence profile

Prediction of Local Sequence Properties

SourceSummaryResult
scaler
NCBI Databasesequence
PSIPREDsecondary structure
SSPROsecondary structure
DISEMBLcoil and loop
DISEMBLflexible loop
SEGlow complexity
DISOPREDdisordered
DISEMBLmissing residues
DISPROdisordered
TMHMM1 TM-Helix
TOPPRED1 TM-Helix
HMMTOP1 TM-Helix
MEMSAT1 TM-Helix
MEMSAT_SVMnone TM-Helix
PHOBIUS1 TM-Helix
SignalP_HMMyes
SignalP_NNyes
COILScoiled coil
  
--------10--------20--------30--------4
MFRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHGCKNV
cHHHHHHHHHHHHHHHcccccEEEccccccccccccccc
ccHHHHHHHHHHHHHHccccEEEcccccccccccccccc
MFRNFFLGLSIILMIAGypafayktntchgygthgcknv
MFRNFFLGLSIILMIAGYPAFAYKTNtchgygthgcknv
MFRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHGCKNV
*FRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHG****
MFRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHGCKNV
MFRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHGC*N*
iiiiHHHHHHHHHHHHHHHHHHooooooooooooooooo
xxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxx
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
iiHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooo
MFRNFFLGLSIILMIAGYPAFAYKTNTCHGYGTHGCKNV

Close Homologs Detected by BLAST or PSI-BLAST

Homolog within the Genome Detected by BLAST

No hits with e-value below 0.05

Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations

No hits with e-value below 0.005 within the first 2 iteration


Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch

Conserved Domains in CDD Database Detected by RPS-BLAST

No hit with e-value below 0.005

Conserved Domains in CDD Database Detected by HHsearch

No hit with probability above 90.00


Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch

Homologous Structures Detected by PSI-BLAST against Nonredundant Database

No homologous structure with e-value below 0.005

Homologous Structures in PDB70 Database Detected by RPS-BLAST

No hit with e-value below 0.005

Homologous Structures in PDB70 Database Detected by HHsearch

No hit with probability above 90.00


Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch

Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST

No hit with e-value below 0.005

Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch

No hit with probability above 90.00

Homologous Domains in MMDB70 Database Detected by RPS-BLAST

No hit with e-value below 0.005

Homologous Domains in MMDB70 Database Detected by HHsearch

No hit with probability higher than 90.00