Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
Refs: Structure 14, 1489-1498; Current opinion in structural biology 18, 358-365
Representatives:
e1dfuP1[P:1-94] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RIBOSOMAL PROTEIN L25 ; X-RAY DIFFRACTION 1.8Å
e1feuA1[A:1-93] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S RIBOSOMAL PROTEIN L25 ; ligands: CD ; X-RAY DIFFRACTION 2.3Å
e4w29DZ2[DZ:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.8Å
e4w2fDZ2[DZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.400Å
e4w2gDZ2[DZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; X-RAY DIFFRACTION 2.550Å
e4w2hDZ2[DZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; X-RAY DIFFRACTION 2.700Å
e4w2iDZ2[DZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; X-RAY DIFFRACTION 2.700Å
e4xejBL252[BL25:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; X-RAY DIFFRACTION 3.8Å
e4y4o1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.300Å
e4y4o2Z1[2Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.300Å
e4y4p1Z1[1Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å
e4y4p2Z1[2Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å
e4tuaRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.400Å
e4tuaYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.400Å
e4tubRZ2[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tubYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tucRZ2[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tucYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tudRZ2[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tudYZ1[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.600Å
e4tueRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.500Å
e4tueYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.500Å
e4z8c1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e4z8c2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e4zer2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4zer1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: ARG,MG ; X-RAY DIFFRACTION 3.100Å
e4z3q1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: MG
e4z3q2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: MG
e4z3s1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.650Å
e4z3s2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.650Å
e4z3r2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
e4z3r1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
e4wq1D52[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4wqrD52[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e4wr6D52[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wsdD51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e4wt1D51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wu1D51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e4wzdD51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4wzoD51[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4wsmD52[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4wq1H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4wqrH81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e4wr6H82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wraH82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wroH81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wsdH82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e4wsmH81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4wt1H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wu1H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e4wzdH82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4wzoH81[H8:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4u67S2[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.65Å
e5a9zAW2[AW:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5aa0AW1[AW:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5d8bPB1[PB:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.63Å
e4w4gRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4w4gYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e4ypbRZ2[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.400Å
e4ypbYZ1[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.400Å
e4yzvRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e4yzvYZ1[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e5d8bT2[T:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.63Å
e5dm6S1[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.90Å
e5dm7S2[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.00Å
e4wfnS1[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.54Å
e5dox2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e5doy1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e5dox1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e5doy2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S Ribosomal Protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e5e7kD52[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e5el6D52[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e5el7D51[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e5e7kH82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e5el4H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e5el6H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.100Å
e5el7H82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e5fdu2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.900Å
e5fdv2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e5e81H81[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e5el5H81[H8:2-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e5fdu1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.900Å
e5fdv1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e5e81D51[D5:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e5el4D51[D5:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e5el5D52[D5:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.150Å
e5f8k2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e5f8k1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e4wraD52[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.050Å
e4wceS1[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.510Å
e4wf9S1[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: SPD ; X-RAY DIFFRACTION 3.400Å
e4wfaS1[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG,SPD ; X-RAY DIFFRACTION 3.400Å
e4wfbS2[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.430Å
e5iznA1[A:-1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznB1[B:-1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznC1[C:0-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznD1[D:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznE1[E:0-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznF1[F:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznG1[G:0-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5iznH1[H:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; ligands: PO4 ; X-RAY DIFFRACTION 2.35Å
e5hau1X1[1X:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.000Å
e5hau2X2[2X:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.000Å
e5hcp1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.890Å
e5hcp2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.890Å
e5hcq1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e5hcq2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e5hcr1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e5hcr2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.800Å
e5hd11Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å
e5hd12Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.700Å
e5j4dBC1[BC:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.1Å
e5imqr2[r:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5imrr1[r:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5ib7D51[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.990Å
e5ib8D51[D5:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.130Å
e5j4dW1[W:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.1Å
e4wt8CZ2[CZ:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; X-RAY DIFFRACTION 3.400Å
e4wt8DZ2[DZ:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; X-RAY DIFFRACTION 3.400Å
e4zsnRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.6Å
e4zsnYZ2[YZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.6Å
e5dm8S2[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH
e5czpRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e5dfeRZ1[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.09997551079Å
e5j3cRZ2[RZ:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.040Å
e5czpYZ2[YZ:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.300Å
e5dfeYZ1[YZ:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.09997551079Å
e5j30RZ1[RZ:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e5j30YZ2[YZ:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e5j3cYZ2[YZ:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.040Å
e5jvgS2[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.350Å
e5jvhS2[S:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.580Å
e5li0Y1[Y:3-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5hl7S2[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: EOH,MPD ; X-RAY DIFFRACTION 3.550Å
e5hkvS2[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG,MN,MPD ; X-RAY DIFFRACTION 3.64Å
e5tcuL81[L8:3-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5t7vL81[L8:2-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5vp22Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e5vp21Z1[1Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e5nd8Y1[Y:3-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5nd9Y1[Y:3-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5o60W2[W:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5o61W2[W:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5nrgS1[S:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.442Å
e5w4k1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å
e5w4k2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å
e5v7qV1[V:6-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5v93V1[V:6-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5ng8AT1[AT:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH
e5ng8BT1[BT:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH
e5ngmAT1[AT:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5xymV1[V:7-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6cae2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e5wdtV1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG,PHE ; ELECTRON MICROSCOPY
e6cae1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e5we4V1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG,PHE ; ELECTRON MICROSCOPY
e5we6V1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5ndjH82[H8:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e5wf0V1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5ndjD51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.150Å
e5wfkV1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5wfsV1[V:2-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6bohW1[W:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.4Å
e5ndkH82[H8:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e6bu8241[24:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5ndkD51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.950Å
e6b4vW2[W:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.4Å
e5ot762[6:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6b4vAC2[AC:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.4Å
e5wis2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å
e5wit2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e6c5lBZ1[BZ:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.2Å
e6c5lDZ2[DZ:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.2Å
e5wis1Z2[1Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å
e5wit1Z2[1Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å
e6c4iW1[W:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6cfk1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.700Å
e5uq7Z2[Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5uq8Z1[Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6cfj1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e6cfk2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.700Å
e6cfl2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.600Å
e6cfj2Z2[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å
e6cfl1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 2.600Å
e6fxcAT1[AT:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e5v8i1Z2[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.250Å
e6fxcBT1[BT:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6fkr1Z1[1Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e6fkr2Z1[2Z:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.200Å
e5v8i2Z1[2Z:1-93] Image Pymol Jmol Links: PDB, SCOP, CATH
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.250Å
e6bohBC2[BC:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.4Å
e6bokW1[W:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.55Å
e6bokZB1[ZB:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ligands: MG ; X-RAY DIFFRACTION 3.55Å
e6dziW2[W:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6dzpW2[W:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6gbzV1[V:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6dncZ1[Z:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6gwtV1[V:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6gxmV1[V:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6h4nV1[V:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
e6gslD51[D5:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; X-RAY DIFFRACTION 3.160Å
e5zlus2[s:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
50S ribosomal protein L25 ; ELECTRON MICROSCOPY
Previous NextPseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes