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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: Ribosomal protein L5
H: Ribosomal protein L5
T: Ribosomal protein L5
F: Ribosomal_L5,Ribosomal_L5_C

PF00281 PF00673

Representatives:

e1iq4A1[A:1-179] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 1.8Å

e5xymF1[F:9-184] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5myjBG1[BG:3-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6cae1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e6eriAF1[AF:14-193] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5, chloroplastic ; ELECTRON MICROSCOPY

e5wdtF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5we4F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5we6F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6cae2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e5wf0F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5ndj411[41:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.150Å

e5wfkF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5wfsF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5ndj491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.150Å

e6bohH1[H:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.4Å

e6enfF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6enjF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6enuF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6az3D1[D:8-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 (L5, L16) ; ELECTRON MICROSCOPY

e5ndgM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; X-RAY DIFFRACTION 3.700Å

e6bu8071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5ndk411[41:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.950Å

e5ns4A1[A:4-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.4Å

e6ek0LJ1[LJ:3-107,LJ:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH

e5ns3A1[A:5-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 1.987Å

e5ns3B1[B:5-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 1.987Å

e5ns4B1[B:5-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.4Å

e5ndgm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; X-RAY DIFFRACTION 3.700Å

e5ndvM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e5ndvm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.300Å

e5ndwm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.700Å

e5ndwM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.700Å

e5obmM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.400Å

e5obmm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG ; X-RAY DIFFRACTION 3.400Å

e5ndk491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.950Å

e6b4vH1[H:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.4Å

e5wis1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e6b4vLB1[LB:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.4Å

e5ot7j1[j:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5wis2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e5wit1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e5wit2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e6c5lBG1[BG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e6c5lDG1[DG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e6c4iF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uq7G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5on6s1[s:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.1Å

e5uq8G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5on6CM1[CM:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.1Å

e6cfj1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e6cfj2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e6cfk1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 2.700Å

e6cfk2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 2.700Å

e6cfl1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e6cfl2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e5v8i1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 3.250Å

e6ft6J1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6frkJ1[J:9-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein uL5 ; ELECTRON MICROSCOPY

e6ftgJ1[J:9-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6fxcAF1[AF:2-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6ftiJ1[J:9-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6ftjJ1[J:9-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6fxcBF1[BF:2-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5v8i2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 3.250Å

e6fkr1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.200Å

e6fkr2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.200Å

e6bohMB1[MB:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.4Å

e6bokH1[H:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.55Å

e6bokKB1[KB:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.55Å

e6d90J1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL11 ; ELECTRON MICROSCOPY

e6d9jJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL11 ; ELECTRON MICROSCOPY

e6gsj491[49:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.960Å

e6ha1F1[F:2-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gq1J1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e5zluc1[c:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5vpoRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e6gbzF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6dncI1[I:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gwtF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gxmF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6h4nF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6dziF1[F:6-187] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6dzpF1[F:6-187] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gsj411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.960Å

e6gsk411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.360Å

e6gsl411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.160Å

e6gsl491[49:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.160Å

e6ha8F1[F:2-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gc0F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gc4F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gc8F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gxnF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gxoF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gxpF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6h58F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6h58FF1[FF:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gqbJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6gqvJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6gsk491[49:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.360Å

e5vpoYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e5vppRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.7Å

e5vppYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.7Å

e5zebF1[F:6-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5zepF1[F:6-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5zetF1[F:6-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gzqF11[F1:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6buwRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.500Å

e6hcfJ31[J3:8-107,J3:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ligands: MG ; ELECTRON MICROSCOPY

e6hmaF1[F:19-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6buwYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.500Å

e6bz6RG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.180Å

e6bz6YG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.180Å

e6bz7RG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.640Å

e6bz7YG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.640Å

e6bz8RG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.610Å

e6bz8YG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.610Å

e6gzxF11[F1:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gzxF21[F2:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gzzF11[F1:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gzzF21[F2:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6hcjJ31[J3:8-107,J3:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6hcmJ31[J3:8-107,J3:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ligands: MG ; ELECTRON MICROSCOPY

e6hcqJ31[J3:8-107,J3:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6mtbJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6mtcJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6mtdJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e6mteJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e6gz3AJ1[AJ:9-107,AJ:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L11 ; ELECTRON MICROSCOPY

e6i0yF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6gz4AJ1[AJ:9-107,AJ:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ribosomal protein uL5 ; ELECTRON MICROSCOPY

e6gz5AJ1[AJ:9-107,AJ:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ribosomal protein uL5 ; ELECTRON MICROSCOPY

e6i7vCF1[CF:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.800Å

e6i7vDF1[DF:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.800Å

e6hd7M1[M:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6hrmE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6n9e1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; X-RAY DIFFRACTION 3.700Å

e6n9e2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; X-RAY DIFFRACTION 3.700Å

e6n9f1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.700Å

e6n9f2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; X-RAY DIFFRACTION 3.700Å

e6i7oAG1[AG:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6i7oXG1[XG:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6nd61G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.850Å

e6hhqs1[s:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.1Å

e6q98E1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: ZN ; ELECTRON MICROSCOPY

e6nd62G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.850Å

e6q95E1[E:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6hhqCM1[CM:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.1Å

e6by1CF1[CF:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.940Å

e6ndkRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.640Å

e6ndkYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.640Å

e6by1DF1[DF:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.940Å

e6q97E1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6n8jJ1[J:7-171] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6n8kJ1[J:10-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6n8lJ1[J:10-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6n8mM1[M:6-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6n8nM1[M:6-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6n8oM1[M:6-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6q8yAG1[AG:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6nd51G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e6nd52G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e6n1dAL051[AL05:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e6n1dBL051[BL05:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2Å

e6qulF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6czr1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 3.1400Å

e6q9aE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6czr2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L5 ; ligands: ARG,MG ; X-RAY DIFFRACTION 3.1400Å

e6o971G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.750Å

e6qzpLJ1[LJ:3-107,LJ:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6o972G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.750Å

e6of11G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e6of12G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e6o9kF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6o9jF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6ip52E1[2E:3-107,2E:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6ip62E1[2E:3-107,2E:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6ip82E1[2E:3-107,2E:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6oreE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6orlE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6ostE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6ot3E1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6ouoE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6oleL1[L:9-107,L:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6olfL1[L:9-107,L:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6olgAJ1[AJ:9-107,AJ:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6oliL1[L:9-107,L:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6olzAJ1[AJ:9-107,AJ:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ligands: MG ; ELECTRON MICROSCOPY

e6om0L1[L:9-107,L:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6om7L1[L:9-107,L:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e6qnq411[41:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: K ; X-RAY DIFFRACTION 4.85Å

e6qnq491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 4.85Å

e6qnr411[41:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: K,MG ; X-RAY DIFFRACTION 4.00Å

e6qnr491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: K,MG ; X-RAY DIFFRACTION 4.00Å

e6oskE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6osqE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e6qikE1[E:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6qt0E1[E:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6qtzE1[E:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e6r84M1[M:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6r87M1[M:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ELECTRON MICROSCOPY

e6ri5E1[E:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

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e1vqoD1[D:10-107,D:128-174] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5P ; ligands: CL,NA ; X-RAY DIFFRACTION 2.2Å

e1vw4E1[E:19-292] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes