F-group (family)
5084.5.1.1 Porin_1
Ligands and drugs
362
Member domains
171
with ligand contacts (≤ 4 Å)
47.2% of members
158
with DrugDomain annotations
43.6% of members
98
with a DrugBank compound
27.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5084.5.1.1 belongs to X-group 5084 Outer membrane meander beta-barrels, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02767 | FTT | (R)-3-hydroxytetradecanoic acid | 9 |
| DB08231 | MYR | Myristic acid | 8 |
| DB02415 | OES | N-Octyl-2-Hydroxyethyl Sulfoxide | 6 |
| DB03548 | KDO | 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid | 6 |
| DB00171 | ATP | ATP | 3 |
| DB00415 | AIC | Ampicillin | 3 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 2 |
| DB09459 | TLA | L-tartaric acid | 2 |
| DB00537 | CPF | Ciprofloxacin | 1 |
| DB00694 | DM1 | Daunorubicin | 1 |
| DB03017 | DAO | Lauric acid | 1 |
| DB07084 | 451 | N-(6,7,9,10,17,18,20,21-octahydrodibenzo[b,k][1,4,7,10,13,16]hexaoxacyclooctadecin-2-yl)acetamide | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 24 |
| LImetal | LITHIUM ION | 11 |
| BR | BROMIDE ION | 10 |
| FTT | 3-HYDROXY-TETRADECANOIC ACID | 9 |
| MYR | MYRISTIC ACID | 8 |
| OLC | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | 8 |
| CL | CHLORIDE ION | 7 |
| Kmetal | POTASSIUM ION | 7 |
| ZNmetal | ZINC ION | 7 |
| C14 | TETRADECANE | 6 |
| CAmetal | CALCIUM ION | 6 |
| D10 | DECANE | 6 |
| D12 | DODECANE | 6 |
| HEX | HEXANE | 6 |
| KDL | (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid | 6 |
| OCT | N-OCTANE | 6 |
| OES | N-OCTYL-2-HYDROXYETHYL SULFOXIDE | 6 |
| SCN | THIOCYANATE ION | 6 |
| CSmetal | CESIUM ION | 4 |
| HP6 | HEPTANE | 4 |