ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5g4aA1 - ECOD Domain | ECOD

ECOD/Domains/e5g4aA1

e5g4aA1

UID: 002138940

PDB

Range: A:2-157
PDB: 5G4A chain A(all domains)
UniProt: Q8ZPX9 (all domains)
Gene: aadA

Molecule: Aminoglycoside (3'') (9) adenylyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Polbeta →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyPolbeta(316.1.1.27)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Chloride ionCL
Magnesium ionMG

Pfam Families

PF18765Polbeta

Polymerase beta, Nucleotidyltransferase

ClanCL0260NTP_transf

External Links

ECOD PDB View: 5G4A RCSB PDB: 5G4A PDBe: 5G4A UniProt: Q8ZPX9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Unknown atom or ionUNX

within 5 Å only

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.