F-group (family)
10.12.1.1 cNMP_binding
Ligands and drugs
2,018
Member domains
656
with ligand contacts (≤ 4 Å)
32.5% of members
555
with DrugDomain annotations
27.5% of members
484
with a DrugBank compound
24.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 10.12.1.1 belongs to X-group 10 jelly-roll, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02527 | CMP | Cyclic adenosine monophosphate | 273 |
| DB02315 | PCG | Cyclic GMP | 129 |
| DB08845 | AKG | Oxogluric acid | 14 |
| DB02175 | MLA | Malonic acid | 6 |
| DB18267 | HEM | Ferroheme | 6 |
| DB00171 | ATP | ATP | 5 |
| DB04335 | NOS | Inosine | 5 |
| DB02857 | GMP | Guanosine | 4 |
| DB01790 | — | (Rp)-cAMPS | 3 |
| DB02210 | HEZ | Hexane-1,6-Diol | 3 |
| DB00145 | GLY | Glycine | 2 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 2 |
| DB11588 | CMO | Carbon monoxide | 2 |
| DB12010 | — | Fostamatinib | 2 |
| DB00139 | SIN | Succinic acid | 1 |
| DB00172 | PRO | Proline | 1 |
| DB00458 | — | Imipramine | 1 |
| DB00637 | — | Astemizole | 1 |
| DB03175 | POL | Propyl alcohol | 1 |
| DB03350 | NCO | Cobalt hexammine ion | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CMP | ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | 340 |
| PCG | CYCLIC GUANOSINE MONOPHOSPHATE | 131 |
| AKG | 2-OXOGLUTARIC ACID | 24 |
| NAmetal | SODIUM ION | 22 |
| CL | CHLORIDE ION | 19 |
| 3C4 | (3-CHLORO-4-HYDROXYPHENYL)ACETIC ACID | 13 |
| UNX | UNKNOWN ATOM OR ION | 12 |
| CAmetal | CALCIUM ION | 11 |
| AUmetal | GOLD ION | 10 |
| GMP | GUANOSINE | 8 |
| NOS | INOSINE | 8 |
| PGW | (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl(9Z)-octadec-9-enoate | 8 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 6 |
| IOD | IODIDE ION | 6 |
| MLA | MALONIC ACID | 6 |
| SF4 | IRON/SULFUR CLUSTER | 6 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 5 |
| Kmetal | POTASSIUM ION | 5 |
| SP1 | 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL | 5 |
| 1OR | (2R,4aR,6R,7R,7aS)-6-[6-(dipropylamino)-9H-purin-9-yl]tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide | 4 |