F-group (family)
10.12.1.29 CDO_I
Ligands and drugs
152
Member domains
121
with ligand contacts (≤ 4 Å)
79.6% of members
105
with DrugDomain annotations
69.1% of members
56
with a DrugBank compound
36.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 10.12.1.29 belongs to X-group 10 jelly-roll, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00151 | CYS | Cysteine | 22 |
| DB03688 | 3OH | Hydracrylic acid | 12 |
| DB04422 | HCS | Homocysteine | 6 |
| DB03201 | DCY | D-Cysteine | 2 |
| DB00139 | SIN | Succinic acid | 1 |
| DB00157 | — | NADH | 1 |
| DB02761 | CSS | S-Mercaptocysteine | 1 |
| DB09140 | OXY | Oxygen | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| FEmetal | FE (III) ION | 57 |
| FE2metal | FE (II) ION | 49 |
| CL | CHLORIDE ION | 28 |
| CYS | CYSTEINE | 22 |
| MGmetal | MAGNESIUM ION | 14 |
| 3OH | 3-HYDROXY-PROPANOIC ACID | 12 |
| MNmetal | MANGANESE (II) ION | 10 |
| 2CO | S-HYDROPEROXYCYSTEINE | 6 |
| HCS | 2-AMINO-4-MERCAPTO-BUTYRIC ACID | 6 |
| NAmetal | SODIUM ION | 5 |
| THJ | THIOSULFATE | 5 |
| NImetal | NICKEL (II) ION | 4 |
| SCN | THIOCYANATE ION | 4 |
| CAmetal | CALCIUM ION | 2 |
| DCY | D-CYSTEINE | 2 |
| NO | NITRIC OXIDE | 2 |
| PEO | HYDROGEN PEROXIDE | 2 |
| 3JF | N-acetyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide | 1 |
| 3SS | 3-disulfanylpropanoic acid | 1 |
| A1ACI | N-acetyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-{[(4P)-4-(1H-pyrazol-3-yl)naphthalen-1-yl]methyl}-L-prolinamide | 1 |