ECOD
F-group (family)

150.1.2.1 Ribonuc_red_sm

Open in classification tree →Pfam PF00268 →

Ligands and drugs

594
Member domains
437
with ligand contacts (≤ 4 Å)
73.6% of members
338
with DrugDomain annotations
56.9% of members
143
with a DrugBank compound
24.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 150.1.2.1 belongs to X-group 150 Ferritin/Heme oxygenase/4-helical cytokines, which binds 8.0 ligand superclasses per 20 proteins, broader than 55% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03796PLMPalmitic Acid34
DB03247FMNFlavin mononucleotide21
DB08231MYRMyristic acid5
DB03222DTPdATP4
DB04519OCACaprylic acid4
DB09140OXYOxygen3
DB00242—Cladribine2
DB03017DAOLauric acid2
DB11091PEOHydrogen peroxide2
DB14522OHHydroxide ion2
DB04315GDPGuanosine-5'-Diphosphate1
DB05003——1
DB05260——1
DB05428——1

Most frequently bound compounds

PDB ligandNameDomains in contact
MNmetalMANGANESE (II) ION205
FEmetalFE (III) ION116
FE2metalFE (II) ION52
HGmetalMERCURY (II) ION41
CAmetalCALCIUM ION34
PLMPALMITIC ACID34
FMNFLAVIN MONONUCLEOTIDE25
MN3metalMANGANESE (III) ION22
MGmetalMAGNESIUM ION16
CU1metalCOPPER (I) ION13
CLCHLORIDE ION12
OHHYDROXIDE ION12
FNR1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL5
MYRMYRISTIC ACID5
NAmetalSODIUM ION5
DTP2'-DEOXYADENOSINE 5'-TRIPHOSPHATE4
OCAOCTANOIC ACID (CAPRYLIC ACID)4
SCNTHIOCYANATE ION4
UNXUNKNOWN ATOM OR ION4
OXYOXYGEN MOLECULE3