F-group (family)

2002.1.1.18 Glyco_hydro_10

Open in classification tree →Pfam PF00331 →

Ligands and drugs

517

Member domains

288

with ligand contacts (≤ 4 Å)

55.7% of members

254

with DrugDomain annotations

49.1% of members

151

with a DrugBank compound

29.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2002.1.1.18 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB00141	NAG	N-Acetylglucosamine	25
DB01862	IPT	Isopropyl beta-D-thiogalactopyranoside	4
DB03389	XYS	alpha-D-Xylopyranose	4
DB04349	PGO	(S)-propane-1,2-diol	2
DB04417	NPO	P-Nitrophenol	2
DB02374	XIM	Xylose-Derived Imidazole	1
DB03570	144	Tris-Hydroxymethyl-Methyl-Ammonium	1
DB03717	XIL	3-Hydroxy-4-(3,4,5-trihydroxy-tetrahydro-pyran-2-yloxy)-piperidin-2-one	1
DB03911	LXC	L-Xylopyranose	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
6NT	6-NITROBENZOTRIAZOLE	57
MGmetal	MAGNESIUM ION	35
NAmetal	SODIUM ION	35
CAmetal	CALCIUM ION	34
CL	CHLORIDE ION	28
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose	26
XYP	beta-D-xylopyranose	19
ZNmetal	ZINC ION	12
IPT	1-methylethyl 1-thio-beta-D-galactopyranoside	4
Kmetal	POTASSIUM ION	4
UNX	UNKNOWN ATOM OR ION	3
3NY	5-nitro-1H-benzotriazole	2
CDmetal	CADMIUM ION	2
HQ8	(1~{R},2~{S},4~{S},5~{R})-cyclohexane-1,2,3,4,5-pentol	2
NImetal	NICKEL (II) ION	2
NPO	P-NITROPHENOL	2
P6G	HEXAETHYLENE GLYCOL	2
PGO	S-1,2-PROPANEDIOL	2
XYS	alpha-D-xylopyranose	2
144	TRIS-HYDROXYMETHYL-METHYL-AMMONIUM	1