T-group (topology)

2003.2.1 Formate dehydrogenase/DMSO reductase, domains 2 and 3

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Ligands and drugs

2,067

Member domains

587

with ligand contacts (≤ 4 Å)

28.4% of members

439

with DrugDomain annotations

21.2% of members

167

with a DrugBank compound

8.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2003.2.1 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB18509	AST	Arsenite ion	12
DB03317	HEC	Ferroheme C	11
DB02078	PG5	Triglyme	8
DB02453	SBO	Antimonous acid	8
DB04137	GTP	Guanosine-5'-Triphosphate	6
DB00142	GLU	Glutamic acid	4
DB00157	NAI	NADH	4
DB03328	MOS	Dioxo(sulfanyl)molybdenum	4
DB03138	LCP	Perchlorate	3
DB02517	DGL	D-Glutamic Acid	2
DB04315	GDP	Guanosine-5'-Diphosphate	2
DB12529	NO2	Nitrite	2
DB16426	SO2	Sulfur dioxide	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
MGD	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE	404
SF4	IRON/SULFUR CLUSTER	215
4MOmetal	MOLYBDENUM(IV) ION	120
MOmetal	MOLYBDENUM ATOM	120
H2S	HYDROSULFURIC ACID	94
O	OXYGEN ATOM	84
CAmetal	CALCIUM ION	72
MD1	PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER	64
Wmetal	TUNGSTEN ION	51
F3S	FE3-S4 CLUSTER	40
6MOmetal	MOLYBDENUM(VI) ION	32
PGD	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE	32
BTT	BENZENE-1,2,4,5-TETROL	24
PYG	BENZENE-1,2,3-TRIOL	24
UNX	UNKNOWN ATOM OR ION	20
Kmetal	POTASSIUM ION	16
2MO	MOLYBDENUM (IV)OXIDE	14
MGmetal	MAGNESIUM ION	14
ART	ARSENATE	12
AST	ARSENITE	12