F-group (family)
2004.1.1.29 DEAD
Ligands and drugs
4,050
Member domains
521
with ligand contacts (≤ 4 Å)
12.9% of members
369
with DrugDomain annotations
9.1% of members
289
with a DrugBank compound
7.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2004.1.1.29 belongs to X-group 2004 P-loop domains-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 163 |
| DB00131 | AMP | Adenosine phosphate | 20 |
| DB00171 | ATP | ATP | 9 |
| DB04444 | ALF | Tetrafluoroaluminate Ion | 8 |
| DB02930 | AGS | Adenosine 5'-[gamma-thio]triphosphate | 4 |
| DB03226 | ETF | Trifluoroethanol | 3 |
| DB04555 | CDP | Cytidine-5'-Diphosphate | 3 |
| DB09459 | TLA | L-tartaric acid | 2 |
| DB11638 | — | — | 2 |
| DB00259 | SAN | Sulfanilamide | 1 |
| DB01694 | — | D-tartaric acid | 1 |
| DB02210 | HEZ | Hexane-1,6-Diol | 1 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 1 |
| DB03345 | BME | Mercaptoethanol | 1 |
| DB03434 | MPO | 3-(N-morpholino)propanesulfonic acid | 1 |
| DB03435 | UDP | Uridine-5'-Diphosphate | 1 |
| DB03556 | PE5 | 2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400 | 1 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 1 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 1 |
| DB09130 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 240 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 239 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 59 |
| BEF | BERYLLIUM TRIFLUORIDE ION | 39 |
| CL | CHLORIDE ION | 24 |
| AMP | ADENOSINE MONOPHOSPHATE | 20 |
| ALF | TETRAFLUOROALUMINATE ION | 15 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 15 |
| AGS | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | 12 |
| MNmetal | MANGANESE (II) ION | 8 |
| CAmetal | CALCIUM ION | 7 |
| AF3 | ALUMINUM FLUORIDE | 6 |
| RY8 | N-(2,3-dimethyl-5-sulfamoylphenyl)-4-(2-methylthiazol-4-yl)benzamide | 6 |
| WCN | (4P)-N-{5-[(4-chlorophenyl)methoxy]-1,3,4-thiadiazol-2-yl}-4-(2-methoxyphenyl)pyridine-3-carboxamide | 6 |
| 8OD | [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate | 4 |
| A1BB1 | (3aR,4R,5S,5aR,10bR)-3a-hydroxy-N,8,10-trimethoxy-5a-(4-methoxyphenyl)-N,2-dimethyl-5-phenyl-3a,4,5,5a-tetrahydro-1H-[1]benzofuro[3',2':1,5]cyclopenta[1,2-d]imidazole-4-carboxamide | 4 |
| ZNmetal | ZINC ION | 4 |
| 8OP | [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate | 3 |
| CDP | CYTIDINE-5'-DIPHOSPHATE | 3 |
| ETF | TRIFLUOROETHANOL | 3 |