F-group (family)
2004.1.1.414 GTP_EFTU, MMR_HSR1
Ligands and drugs
946
Member domains
122
with ligand contacts (≤ 4 Å)
12.9% of members
99
with DrugDomain annotations
10.5% of members
94
with a DrugBank compound
9.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2004.1.1.414 belongs to X-group 2004 P-loop domains-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04315 | GDP | Guanosine-5'-Diphosphate | 49 |
| DB03725 | GCP | 5'-Guanylylmethylenebisphosphonate | 13 |
| DB02082 | GNP | Phosphoaminophosphonic acid guanylate ester | 12 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 10 |
| DB03350 | NCO | Cobalt hexammine ion | 6 |
| DB04022 | G4P | Guanosine tetraphosphate | 6 |
| DB02059 | — | Adenosine-5-Diphosphoribose | 1 |
| DB02379 | BGC | Beta-D-Glucose | 1 |
| DB03223 | — | — | 1 |
| DB04444 | ALF | Tetrafluoroaluminate Ion | 1 |
| DB08348 | — | N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE | 1 |
| DB11823 | — | Esketamine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| GDP | GUANOSINE-5'-DIPHOSPHATE | 62 |
| MGmetal | MAGNESIUM ION | 55 |
| GCP | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | 16 |
| GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 10 |
| G4P | GUANOSINE-5',3'-TETRAPHOSPHATE | 7 |
| NCO | COBALT HEXAMMINE(III) | 6 |
| NAmetal | SODIUM ION | 3 |
| CL | CHLORIDE ION | 2 |
| KIR | KIRROMYCIN | 2 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 1 |
| ALF | TETRAFLUOROALUMINATE ION | 1 |
| BGC | beta-D-glucopyranose | 1 |
| Kmetal | POTASSIUM ION | 1 |
| PUL | (1S,2S,3E,5E,7E,10S,11S,12S)-12-[(2R,4E,6E,8Z,10R,12E,14E,16Z,18S,19Z)-10,18-DIHYDROXY-12,16,19-TRIMETHYL-11,22-DIOXOOXACYCLODOCOSA-4,6,8,12,14,16,19-HEPTAEN-2-YL]-2,11-DIHYDROXY-1,10-DIMETHYL-9-OXOTRIDECA-3,5,7-TRIEN-1-YL 6-DEOXY-2,4-DI-O-METHYL-BETA-L-GALACTOPYRANOSIDE | 1 |
| SCN | THIOCYANATE ION | 1 |