F-group (family)
2007.3.1.1 Ligase_CoA
Ligands and drugs
974
Member domains
161
with ligand contacts (≤ 4 Å)
16.5% of members
157
with DrugDomain annotations
16.1% of members
138
with a DrugBank compound
14.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.3.1.1 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01992 | COA | Coenzyme A | 77 |
| DB00139 | SIN | Succinic acid | 6 |
| DB02637 | OAA | Oxaloacetate Ion | 5 |
| DB01829 | DCA | Desulfo-coenzyme A | 4 |
| DB02831 | 2HP | Dihydrogenphosphate | 3 |
| DB09459 | TLA | L-tartaric acid | 3 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 2 |
| DB02082 | GNP | Phosphoaminophosphonic acid guanylate ester | 1 |
| DB03725 | GCP | 5'-Guanylylmethylenebisphosphonate | 1 |
| DB11936 | — | — | 1 |
| DB12695 | — | — | 1 |
| DB16833 | ADP | Adenosine disphosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| COA | COENZYME A | 82 |
| Q5B | (3S)-citryl-Coenzyme A | 19 |
| ACO | ACETYL COENZYME *A | 13 |
| MGmetal | MAGNESIUM ION | 11 |
| OAA | OXALOACETATE ION | 7 |
| SIN | SUCCINIC ACID | 6 |
| Y2A | (2S)-2-hydroxy-2-[2-oxo-2-(phosphonooxy)ethyl]butanedioic acid | 5 |
| 2HP | DIHYDROGENPHOSPHATE ION | 4 |
| DCA | DESULFO-COENZYME A | 4 |
| 7A2 | 3-C-carboxy-2-deoxy-L-threo-pentaric acid | 3 |
| CL | CHLORIDE ION | 3 |
| TLA | L(+)-TARTARIC ACID | 3 |
| 2OP | (2S)-2-HYDROXYPROPANOIC ACID | 2 |
| 7A3 | 3-C-carboxy-2-deoxy-D-erythro-pentaric acid | 2 |
| GDP | GUANOSINE-5'-DIPHOSPHATE | 2 |
| TUY | (3S,5S,9R,20R,21R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,20,21-pentahydroxy-8,8-dimethyl-10,14,19-trioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphadocosan-22-oic acid 3,5-dioxide (non-preferred name) | 2 |
| ZNS | 4-oxo-4-(phosphonooxy)butanoic acid | 2 |
| GCP | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | 1 |
| GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 1 |
| ZNmetal | ZINC ION | 1 |