F-group (family)
2484.1.1.7 Ribosomal_S11
Ligands and drugs
3,446
Member domains
871
with ligand contacts (≤ 4 Å)
25.3% of members
288
with DrugDomain annotations
8.4% of members
6
with a DrugBank compound
0.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1.1.7 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00127 | SPM | Spermine | 2 |
| DB00171 | ATP | ATP | 2 |
| DB00919 | SCM | Spectinomycin | 1 |
| DB01972 | G | Guanosine-5'-Monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 797 |
| Kmetal | POTASSIUM ION | 68 |
| OHX | osmium (III) hexammine | 55 |
| UNX | UNKNOWN ATOM OR ION | 12 |
| A1IC4 | (2S,3S)-2-[[(2S)-2-[[(2S,4S)-5-aminocarbonyloxy-4-oxidanyl-2-[[(2S,3R)-3-oxidanylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-3-(2-chloranyl-1H-imidazol-4-yl)-3-oxidanyl-propanoic acid | 7 |
| SPM | SPERMINE | 7 |
| IAS | BETA-L-ASPARTIC ACID | 4 |
| ZNmetal | ZINC ION | 4 |
| 34G | emetine | 3 |
| NAmetal | SODIUM ION | 3 |
| PAR | PAROMOMYCIN | 3 |
| WO2 | OCTADECATUNGSTENYL DIPHOSPHATE | 3 |
| YAT | emetine | 3 |
| 3K8 | (14aR)-2,3,6-trimethoxy-11,12,13,14,14a,15-hexahydro-9H-dibenzo[f,h]pyrido[1,2-b]isoquinoline | 2 |
| PCY | Pactamycin | 2 |
| K16 | Cephaeline | 1 |
| N | ANY 5'-MONOPHOSPHATE NUCLEOTIDE | 1 |
| UAM | Amicoumacin A | 1 |