F-group (family)
2484.1.1.9 rve
Ligands and drugs
1,130
Member domains
632
with ligand contacts (≤ 4 Å)
55.9% of members
619
with DrugDomain annotations
54.8% of members
445
with a DrugBank compound
39.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1.1.9 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB08930 | DLU | Dolutegravir | 29 |
| DB02210 | HEZ | Hexane-1,6-Diol | 14 |
| DB11799 | KLQ | Bictegravir | 7 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 6 |
| DB06817 | RLT | Raltegravir | 4 |
| DB18974 | WBV | Pirmitegravir | 3 |
| DB00123 | LYS | Lysine | 2 |
| DB00156 | THR | Threonine | 2 |
| DB09101 | ELV | Elvitegravir | 2 |
| DB02086 | TTO | (3,4-Dihydroxy-Phenyl)-Triphenyl-Arsonium | 1 |
| DB02184 | DTV | D-1,4-dithiothreitol | 1 |
| DB03118 | 100 | (2Z)-1-(5-Chloro-1H-indol-3-yl)-3-hydroxy-3-(1H-tetrazol-5-yl)-2-propen-1-one | 1 |
| DB04447 | DTT | 1,4-Dithiothreitol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 207 |
| CL | CHLORIDE ION | 125 |
| CDmetal | CADMIUM ION | 55 |
| DLU | (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide | 37 |
| MNmetal | MANGANESE (II) ION | 26 |
| IOD | IODIDE ION | 20 |
| HEZ | HEXANE-1,6-DIOL | 14 |
| L3D | (2S)-tert-butoxy[4-(2,3-dihydropyrano[4,3,2-de]quinolin-7-yl)-2-methylquinolin-3-yl]acetic acid | 10 |
| ZZX | (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide | 10 |
| LF0 | (2S)-tert-butoxy[4-(3,4-dihydro-2H-chromen-6-yl)-2-methylquinolin-3-yl]ethanoic acid | 9 |
| CAmetal | CALCIUM ION | 8 |
| KLQ | Bictegravir | 7 |
| O3N | (2S)-2-(2-carboxyethyl)-6-{[{2-[(cyclohexylmethyl)carbamoyl]benzyl}(prop-2-en-1-yl)amino]methyl}-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid | 6 |
| TAM | TRIS(HYDROXYETHYL)AMINOMETHANE | 6 |
| WBV | (2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid | 5 |
| ZNmetal | ZINC ION | 5 |
| 65P | (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid | 4 |
| ARS | ARSENIC | 4 |
| CBJ | 6-[(5-bromo-2,3-dioxo-2,3-dihydro-1H-indol-1-yl)methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid | 4 |
| IMV | 5-[(2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid | 4 |