F-group (family)
316.1.1.13 RelA_SpoT
Ligands and drugs
170
Member domains
43
with ligand contacts (≤ 4 Å)
25.3% of members
38
with DrugDomain annotations
22.4% of members
24
with a DrugBank compound
14.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 316.1.1.13 belongs to X-group 316 Nucleotidyltransferase-like, which binds 7.3 ligand superclasses per 20 proteins, narrower than 56% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 16 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 2 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 2 |
| DB00131 | AMP | Adenosine phosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 21 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 16 |
| 0O2 | guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) | 10 |
| CL | CHLORIDE ION | 7 |
| FEmetal | FE (III) ION | 2 |
| FE2metal | FE (II) ION | 2 |
| GDP | GUANOSINE-5'-DIPHOSPHATE | 2 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 2 |
| IOD | IODIDE ION | 2 |
| AMP | ADENOSINE MONOPHOSPHATE | 1 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 1 |
| GN3 | [[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-oxidanyl-2-[[oxidanyl(phosphonooxy)phosphoryl]oxymethyl]oxolan-3-yl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid | 1 |
| MNmetal | MANGANESE (II) ION | 1 |
| NAmetal | SODIUM ION | 1 |
| VF5 | [[(3~{a}~{R},4~{R},6~{R},6~{a}~{R})-4-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-2-oxidanyl-2-oxidanylidene-3~{a},4,6,6~{a}-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-6-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate | 1 |