T-group (topology)
3174.1.1 Ribosomal protein L14-related
Ligands and drugs
4,502
Member domains
1,000
with ligand contacts (≤ 4 Å)
22.2% of members
638
with DrugDomain annotations
14.2% of members
38
with a DrugBank compound
0.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 3174.1.1 belongs to X-group 3174 Ribosomal protein L14-like, which binds 5.2 ligand superclasses per 20 proteins, narrower than 80% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03566 | SPD | Spermidine | 4 |
| DB00149 | LEU | Leucine | 2 |
| DB00479 | AKN | Amikacin | 2 |
| DB01421 | PAR | Paromomycin | 2 |
| DB00131 | A | Adenosine phosphate | 1 |
| DB01917 | PUT | Putrescine | 1 |
| DB01972 | G | Guanosine-5'-Monophosphate | 1 |
| DB02494 | — | (S)-3-phenyllactic acid | 1 |
| DB03403 | C | Cytidine-5'-Monophosphate | 1 |
| DB03685 | U | Uridine monophosphate | 1 |
| DB07374 | — | — | 1 |
| DB08437 | — | Puromycin | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 935 |
| OHX | osmium (III) hexammine | 126 |
| CL | CHLORIDE ION | 66 |
| Kmetal | POTASSIUM ION | 31 |
| UNX | UNKNOWN ATOM OR ION | 14 |
| SPD | SPERMIDINE | 13 |
| PUT | 1,4-DIAMINOBUTANE | 10 |
| SPM | SPERMINE | 8 |
| OIY | Streptothricin D | 3 |
| AKN | (2S)-N-[(1R,2S,3S,4R,5S)-4-[(2R,3R,4S,5S,6R)-6-(aminomethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-azanyl-2-[(2S,3R,4S,5S,6R)-4-azanyl-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]-4-azanyl-2-oxidanyl-butanamide | 2 |
| NAmetal | SODIUM ION | 2 |
| PAR | PAROMOMYCIN | 2 |
| NMY | NEOMYCIN | 1 |