F-group (family)

375.1.1.41 Methyltransf_13

Ligands and drugs

29
Member domains
23
with ligand contacts (≤ 4 Å)
79.3% of members
23
with DrugDomain annotations
79.3% of members
5
with a DrugBank compound
17.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 375.1.1.41 belongs to X-group 375 Rubredoxin-like, which binds 5.1 ligand superclasses per 20 proteins, narrower than 81% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03103TYDThymidine-5'- Diphosphate3

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION23
JHZ(2R,4S,6R)-4-amino-4,6-dimethyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)6
CLCHLORIDE ION1
DWN(2R,4S,6R)-4-amino-6-methyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate1
MGmetalMAGNESIUM ION1