H-group (homology)
375.1 Rubredoxin-related
Ligands and drugs
25,586
Member domains
6,352
with ligand contacts (≤ 4 Å)
24.8% of members
5,776
with DrugDomain annotations
22.6% of members
499
with a DrugBank compound
2.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 375.1 belongs to X-group 375 Rubredoxin-like, which binds 5.1 ligand superclasses per 20 proteins, narrower than 81% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01717 | AP5 | Bis(Adenosine)-5'-Pentaphosphate | 80 |
| DB02659 | CHD | Cholic Acid | 56 |
| DB16833 | ADP | Adenosine disphosphate | 33 |
| DB00171 | ATP | ATP | 20 |
| DB00131 | AMP | Adenosine phosphate | 17 |
| DB17057 | SR7 | SRT-1720 | 12 |
| DB03566 | SPD | Spermidine | 9 |
| DB14128 | NAD | Nadide | 7 |
| DB00118 | SAM | Ademetionine | 6 |
| DB00123 | LYS | Lysine | 6 |
| DB00149 | LEU | Leucine | 6 |
| DB00127 | SPM | Spermine | 5 |
| DB03345 | BME | Mercaptoethanol | 5 |
| DB03478 | OAD | 2'-O-Acetyl Adenosine-5-Diphosphoribose | 5 |
| DB04381 | CRD | Crotonaldehyde | 5 |
| DB03103 | TYD | Thymidine-5'- Diphosphate | 3 |
| DB03403 | C | Cytidine-5'-Monophosphate | 3 |
| DB04216 | QUE | Quercetin | 3 |
| DB06819 | CLT | Phenylbutyric acid | 3 |
| DB00142 | GLU | Glutamic acid | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 5,429 |
| MGmetal | MAGNESIUM ION | 1,247 |
| CDmetal | CADMIUM ION | 209 |
| OHX | osmium (III) hexammine | 148 |
| FEmetal | FE (III) ION | 121 |
| CL | CHLORIDE ION | 86 |
| AP5 | BIS(ADENOSINE)-5'-PENTAPHOSPHATE | 80 |
| PEK | (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE | 78 |
| NAmetal | SODIUM ION | 64 |
| SRmetal | STRONTIUM ION | 60 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 35 |
| Kmetal | POTASSIUM ION | 34 |
| FE2metal | FE (II) ION | 24 |
| SPD | SPERMIDINE | 19 |
| UNX | UNKNOWN ATOM OR ION | 15 |
| AMP | ADENOSINE MONOPHOSPHATE | 14 |
| 3HE | 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione | 12 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 12 |
| CAmetal | CALCIUM ION | 12 |
| 8L9 | 5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acid | 9 |