T-group (topology)
377.1.1 LIM domain-like
Ligands and drugs
12,529
Member domains
3,034
with ligand contacts (≤ 4 Å)
24.2% of members
2,002
with DrugDomain annotations
16.0% of members
191
with a DrugBank compound
1.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 377.1.1 belongs to X-group 377 Glucocorticoid receptor-like, which binds 3.2 ligand superclasses per 20 proteins, narrower than 94% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02452 | TTP | Thymidine 5'-triphosphate | 40 |
| DB04485 | THM | Thymidine | 13 |
| DB02746 | — | Phthalic Acid | 7 |
| DB00210 | — | — | 6 |
| DB00459 | — | — | 6 |
| DB00926 | — | — | 6 |
| DB00132 | — | alpha-Linolenic acid | 5 |
| DB00197 | — | — | 5 |
| DB00412 | — | Rosiglitazone | 5 |
| DB01393 | — | Bezafibrate | 5 |
| DB00799 | — | — | 4 |
| DB01395 | — | — | 4 |
| DB03566 | SPD | Spermidine | 4 |
| DB04224 | — | Oleic Acid | 4 |
| DB11638 | — | — | 4 |
| DB14128 | NAD | Nadide | 4 |
| DB00313 | — | — | 3 |
| DB00588 | — | — | 3 |
| DB00675 | — | Tamoxifen | 3 |
| DB01708 | — | Prasterone | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 2,506 |
| MGmetal | MAGNESIUM ION | 1,236 |
| OHX | osmium (III) hexammine | 129 |
| Kmetal | POTASSIUM ION | 70 |
| CDmetal | CADMIUM ION | 66 |
| TTP | THYMIDINE-5'-TRIPHOSPHATE | 41 |
| UNX | UNKNOWN ATOM OR ION | 27 |
| CL | CHLORIDE ION | 16 |
| SPD | SPERMIDINE | 16 |
| MNmetal | MANGANESE (II) ION | 14 |
| THM | THYMIDINE | 13 |
| QBT | [(2R,3S,5R)-3-HYDROXY-5-[(5S)-5-METHYL-2,4-DIOXO-1,3-DIAZINAN-1-YL]OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE | 9 |
| 1N7 | CHAPSO | 7 |
| NAmetal | SODIUM ION | 6 |
| 4TA | P1-(5'-ADENOSYL)P4-(5'-(2'-DEOXY-THYMIDYL))TETRAPHOSPHATE | 4 |
| IOD | IODIDE ION | 4 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 3 |
| G4P | GUANOSINE-5',3'-TETRAPHOSPHATE | 3 |
| AF3 | ALUMINUM FLUORIDE | 2 |
| ASP | ASPARTIC ACID | 2 |