F-group (family)
4.1.1.38 Ribosomal_L2_C
Ligands and drugs
3,558
Member domains
1,514
with ligand contacts (≤ 4 Å)
42.6% of members
709
with DrugDomain annotations
19.9% of members
2
with a DrugBank compound
<0.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4.1.1.38 belongs to X-group 4 SH3, which binds 8.3 ligand superclasses per 20 proteins, broader than 62% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02494 | — | (S)-3-phenyllactic acid | 1 |
| DB03566 | SPD | Spermidine | 1 |
| DB07374 | — | — | 1 |
| DB08437 | — | Puromycin | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 1,503 |
| Kmetal | POTASSIUM ION | 133 |
| OHX | osmium (III) hexammine | 75 |
| CL | CHLORIDE ION | 66 |
| NAmetal | SODIUM ION | 50 |
| SRmetal | STRONTIUM ION | 30 |
| SPD | SPERMIDINE | 22 |
| UNX | UNKNOWN ATOM OR ION | 12 |
| PAR | PAROMOMYCIN | 8 |
| MNmetal | MANGANESE (II) ION | 7 |
| YMZ | (11R,12S)- Mefloquine | 3 |
| 8UZ | TC007 | 1 |
| LLL | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL | 1 |