ECODEvolutionary Classification of Protein Domains

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PDB 5VVL

X-RAY DIFFRACTION2.96 Å10 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACRISPR-associated endonuclease Cas1view chain

1 domain

e5vvlA1(A:16-281)

Chain BCRISPR-associated endonuclease Cas1view chain

1 domain

e5vvlB1(B:4-276)

Chain CCRISPR-associated endonuclease Cas1view chain

1 domain

e5vvlC1(C:15-281)

Chain DCRISPR-associated endonuclease Cas1view chain

1 domain

e5vvlD1(D:4-276)

Chain ECRISPR-associated endoribonuclease Cas2view chain

1 domain

e5vvlE1(E:1-94)

Chain FCRISPR-associated endoribonuclease Cas2view chain

1 domain

e5vvlF1(F:1-94)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vvlA1	A:16-281	Cas_Cas1	3239 → 3239.1 → 3239.1.1
2	B	e5vvlB1	B:4-276	Cas_Cas1	3239 → 3239.1 → 3239.1.1
3	C	e5vvlC1	C:15-281	Cas_Cas1	3239 → 3239.1 → 3239.1.1
4	D	e5vvlD1	D:4-276	Cas_Cas1	3239 → 3239.1 → 3239.1.1
5	E	e5vvlE1	E:1-94	Cas_Cas2CT1978	304 → 304.56 → 304.56.1
6	F	e5vvlF1	F:1-94	Cas_Cas2CT1978	304 → 304.56 → 304.56.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors