ECODEvolutionary Classification of Protein Domains

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PDB 1VQQ

X-RAY DIFFRACTION1.80 Å0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e1vqqA1(A:400-525)e1vqqA3(A:27-138)e1vqqA4(A:328-399,A:526-668)e1vqqA5(A:139-167,A:239-327)e1vqqA6(A:168-238)

Chain Bview chain

5 domains

e1vqqB1(B:400-525)e1vqqB2(B:328-399,B:526-668)e1vqqB3(B:139-167,B:239-327)e1vqqB4(B:168-238)e1vqqB5(B:27-138)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1vqqA1	A:400-525	Transpeptidase	4019 → 4019.1 → 4019.1.1
2	A	e1vqqA3	A:27-138	MecA_N	243 → 243.1 → 243.1.1
3	A	e1vqqA4	A:328-399,A:526-668	Transpeptidase	223 → 223.3 → 223.3.1
4	A	e1vqqA5	A:139-167,A:239-327	PBP_dimer	3702 → 3702.1 → 3702.1.1
5	A	e1vqqA6	A:168-238	308.2.1.0	308 → 308.2 → 308.2.1
6	B	e1vqqB1	B:400-525	Transpeptidase	4019 → 4019.1 → 4019.1.1
7	B	e1vqqB2	B:328-399,B:526-668	Transpeptidase	223 → 223.3 → 223.3.1
8	B	e1vqqB3	B:139-167,B:239-327	PBP_dimer	3702 → 3702.1 → 3702.1.1
9	B	e1vqqB4	B:168-238	308.2.1.0	308 → 308.2 → 308.2.1
10	B	e1vqqB5	B:27-138	MecA_N	243 → 243.1 → 243.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors