ECODEvolutionary Classification of Protein Domains

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PDB 9LE8

50 chains50 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0Chlorophyll a-b binding protein 3, chloroplasticview chain

1 domain

e9le801(0:23-227)

Chain 9Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le891(9:47-248)

Chain AAChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le8AA1(AA:47-248)

Chain ABChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le8AB1(AB:8-211)

Chain ACChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le8AC1(AC:47-248)

Chain ADChlorophyll a-b binding protein 3, chloroplasticview chain

1 domain

e9le8AD1(AD:23-227)

Chain AEChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le8AE1(AE:47-248)

Chain AFChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e9le8AF1(AF:8-211)

Chain AGPhotosystem II reaction center protein Tview chain

1 domain

e9le8AG1(AG:1-30)

Chain AHChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8AH1(AH:12-217)

Chain AIPhotosystem II reaction center protein Zview chain

1 domain

e9le8AI1(AI:1-61)

Chain AJPhotosystem II protein D1view chain

1 domain

e9le8AJ1(AJ:10-335)

Chain AKPhotosystem II CP47 reaction center proteinview chain

2 domains

e9le8AK1(AK:1-328,AK:445-487)e9le8AK2(AK:329-444)

Chain ALPhotosystem II CP43 reaction center proteinview chain

1 domain

e9le8AL1(AL:10-458)

Chain AMPhotosystem II D2 proteinview chain

1 domain

e9le8AM1(AM:15-350)

Chain ANChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8AN1(AN:12-217)

Chain AOPhotosystem II reaction center protein Hview chain

1 domain

e9le8AO1(AO:13-64)

Chain APPhotosystem II reaction center protein Lview chain

1 domain

e9le8AP1(AP:3-38)

Chain AQChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8AQ1(AQ:12-217)

Chain ARChlorophyll a-b binding protein CP29.1, chloroplasticview chain

1 domain

e9le8AR1(AR:16-46,AR:92-248)

Chain ASChlorophyll a-b binding protein CP26, chloroplasticview chain

1 domain

e9le8AS1(AS:11-224)

Chain ATPhotosystem II reaction center protein Tview chain

1 domain

e9le8AT1(AT:1-30)

Chain AUChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8AU1(AU:12-217)

Chain AVPhotosystem II reaction center protein Zview chain

1 domain

e9le8AV1(AV:1-61)

Chain eCytochrome b559 subunit alphaview chain

1 domain

e9le8e1(e:4-82)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e9le8E1(E:4-82)

Chain fCytochrome b559 subunit betaview chain

1 domain

e9le8f1(f:11-39)

Chain FCytochrome b559 subunit betaview chain

1 domain

e9le8F1(F:11-39)

Chain iPhotosystem II reaction center protein Iview chain

1 domain

e9le8i1(i:1-35)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e9le8I1(I:1-35)

Chain jPhotosystem II reaction center protein Hview chain

1 domain

e9le8j1(j:13-64)

Chain JPhotosystem II protein D1view chain

1 domain

e9le8J1(J:10-335)

Chain kPhotosystem II reaction center protein Kview chain

1 domain

e9le8k1(k:1-36)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e9le8K1(K:1-36)

Chain mPhotosystem II reaction center protein Mview chain

1 domain

e9le8m1(m:2-34)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e9le8M1(M:2-34)

Chain oPhotosystem II reaction center protein Lview chain

1 domain

e9le8o1(o:3-38)

Chain OPhotosystem II CP47 reaction center proteinview chain

2 domains

e9le8O1(O:1-328,O:445-487)e9le8O2(O:329-444)

Chain pChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8p1(p:12-217)

Chain PPhotosystem II CP43 reaction center proteinview chain

1 domain

e9le8P1(P:10-458)

Chain qChlorophyll a-b binding protein CP29.1, chloroplasticview chain

1 domain

e9le8q1(q:16-46,q:92-248)

Chain QPhotosystem II D2 proteinview chain

1 domain

e9le8Q1(Q:15-350)

Chain vChlorophyll a-b binding protein CP26, chloroplasticview chain

1 domain

e9le8v1(v:11-224)

Chain VChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e9le8V1(V:12-217)

Chain wPhotosystem II reaction center W protein, chloroplasticview chain

1 domain

e9le8w1(w:4-49)

Chain WPhotosystem II reaction center W protein, chloroplasticview chain

1 domain

e9le8W1(W:4-49)

Chain x(thale cress) hypothetical proteinview chain

1 domain

e9le8x1(x:2-37)

Chain X(thale cress) hypothetical proteinview chain

1 domain

e9le8X1(X:2-37)

All Domains (50)

#	Chain	Domain ID	Range	Family	Classification
1	0	e9le801	0:23-227	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	9	e9le891	9:47-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	AA	e9le8AA1	AA:47-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	AB	e9le8AB1	AB:8-211	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	AC	e9le8AC1	AC:47-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
6	AD	e9le8AD1	AD:23-227	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
7	AE	e9le8AE1	AE:47-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
8	AF	e9le8AF1	AF:8-211	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
9	AG	e9le8AG1	AG:1-30	PsbT	3390 → 3390.1 → 3390.1.1
10	AH	e9le8AH1	AH:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
11	AI	e9le8AI1	AI:1-61	Ycf9	5044 → 5044.1 → 5044.1.1
12	AJ	e9le8AJ1	AJ:10-335	Photo_RC	5037 → 5037.1 → 5037.1.1
13	AK	e9le8AK1	AK:1-328,AK:445-487	PSII	5075 → 5075.1 → 5075.1.1
14	AK	e9le8AK2	AK:329-444	PSII	3744 → 3744.1 → 3744.1.1
15	AL	e9le8AL1	AL:10-458	PSII	5075 → 5075.1 → 5075.1.1
16	AM	e9le8AM1	AM:15-350	Photo_RC	5037 → 5037.1 → 5037.1.1
17	AN	e9le8AN1	AN:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
18	AO	e9le8AO1	AO:13-64	PsbH	5032 → 5032.1 → 5032.1.1
19	AP	e9le8AP1	AP:3-38	PsbL	5030 → 5030.1 → 5030.1.1
20	AQ	e9le8AQ1	AQ:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
21	AR	e9le8AR1	AR:16-46,AR:92-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
22	AS	e9le8AS1	AS:11-224	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
23	AT	e9le8AT1	AT:1-30	PsbT	3390 → 3390.1 → 3390.1.1
24	AU	e9le8AU1	AU:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
25	AV	e9le8AV1	AV:1-61	Ycf9	5044 → 5044.1 → 5044.1.1
26	e	e9le8e1	e:4-82	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
27	E	e9le8E1	E:4-82	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
28	f	e9le8f1	f:11-39	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
29	F	e9le8F1	F:11-39	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
30	i	e9le8i1	i:1-35	PsbI	5035 → 5035.1 → 5035.1.1
31	I	e9le8I1	I:1-35	PsbI	5035 → 5035.1 → 5035.1.1
32	j	e9le8j1	j:13-64	PsbH	5032 → 5032.1 → 5032.1.1
33	J	e9le8J1	J:10-335	Photo_RC	5037 → 5037.1 → 5037.1.1
34	k	e9le8k1	k:1-36	PsbK	5034 → 5034.1 → 5034.1.1
35	K	e9le8K1	K:1-36	PsbK	5034 → 5034.1 → 5034.1.1
36	m	e9le8m1	m:2-34	PsbM	5033 → 5033.1 → 5033.1.1
37	M	e9le8M1	M:2-34	PsbM	5033 → 5033.1 → 5033.1.1
38	o	e9le8o1	o:3-38	PsbL	5030 → 5030.1 → 5030.1.1
39	O	e9le8O1	O:1-328,O:445-487	PSII	5075 → 5075.1 → 5075.1.1
40	O	e9le8O2	O:329-444	PSII	3744 → 3744.1 → 3744.1.1
41	p	e9le8p1	p:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
42	P	e9le8P1	P:10-458	PSII	5075 → 5075.1 → 5075.1.1
43	q	e9le8q1	q:16-46,q:92-248	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
44	Q	e9le8Q1	Q:15-350	Photo_RC	5037 → 5037.1 → 5037.1.1
45	v	e9le8v1	v:11-224	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
46	V	e9le8V1	V:12-217	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
47	w	e9le8w1	w:4-49	PsbW	1084 → 1084.1 → 1084.1.1
48	W	e9le8W1	W:4-49	PsbW	1084 → 1084.1 → 1084.1.1
49	x	e9le8x1	x:2-37	PsbX	3493 → 3493.1 → 3493.1.1
50	X	e9le8X1	X:2-37	PsbX	3493 → 3493.1 → 3493.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors