Download Files

humanPPI_MSA.zip
Size: 17 GB

omicsMSA for each protein

PDBs.zip
Size: 1.8 GB

Models and contacts probability for final confident predictions from Alphafold2

GoodPairs.txt
Size: 16 MB

List and detail information for final confident predictions.

AF_scores.zip
Size: 27 MB

Contact probability of the interactions from Alphafold 2

RF2-PPI_scores.zip
Size: 399 MB

Contact probability of the interactions from RF2-PPI

DCA_scores.zip
Size: 741 MB

Coevolutionary scores of pairs from direct coupling analysis (DCA).

Protein_clusters.txt
Size: 24 KB

A list of 379 protein clusters likely to form higher-order protein complexes. Each line represents a protein cluster, with its members separated by a space. Homologs of the members that are also detected to interact with other members in the cluster are separated by comma.

DDI_training.tar.gz
Size: 330 GB

Domain domain interaction training set

PPI_training.tar.gz
Size: 226 GB

Protein-protein interfaces training set

SE3nv.sif
Size: 14 GB

Singularity image for running RoseTTAFold2-PPI

RF2-PPI.pt
Size: 296 MB

Weights for RoseTTAFold2-PPI