254780476
two component response regulator
GeneID in NCBI database: | 8209465 | Locus tag: | CLIBASIA_01805 |
Protein GI in NCBI database: | 254780476 | Protein Accession: | YP_003064889.1 |
Gene range: | -(398455, 398826) | Protein Length: | 123aa |
Gene description: | two component response regulator | ||
COG prediction: | [T] FOG: CheY-like receiver | ||
KEGG prediction: | two component response regulator; K11443 two-component system, cell cycle response regulator DivK | ||
SEED prediction: | PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN | ||
Pathway involved in KEGG: | Two-component system [PATH:las02020] | ||
Subsystem involved in SEED: | - none - | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 123 | two component response regulator [Candidatus Liberibact | |||
254780450 | 803 | two-component sensor histidine kinase/response reg | 4e-06 | ||
254780893 | 236 | two component response regulator [Candidatus Liber | 5e-06 | ||
254780312 | 122 | response regulator receiver protein [Candidatus Li | 9e-06 |
>gi|254780450|ref|YP_003064863.1| two-component sensor histidine kinase/response regulator hybrid protein [Candidatus Liberibacter asiaticus str. psy62] Length = 803 | Back alignment |
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Score = 41.6 bits (96), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Query: 5 VMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELAR--QHKPDVIIMDIQLQEISGL 62 V++VED + + + ++ET GY + +G +AL++ Q + D++I D+ + E+ G Sbjct: 684 VLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGP 743 Query: 63 EITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISL 109 + +++++ + I ++ +A + + K +++SKP SL Sbjct: 744 TLLRELRK--TYPSLKFIFISGYAEDAFSKNLPKDAKFSFLSKPFSL 788 |
>gi|254780893|ref|YP_003065306.1| two component response regulator [Candidatus Liberibacter asiaticus str. psy62] Length = 236 | Back alignment |
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Score = 41.2 bits (95), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 4 KVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLE 63 +++++ED++ ++++ + T G + +EL + ++ D II+D+ L +I G E Sbjct: 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61 Query: 64 ITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPIS 108 + + ++ PV ++ + D+ R + G + YISKP + Sbjct: 62 VLRALRVAK--ISTPVCILSGMSSIEDKVRGLQSGADDYISKPFN 104 |
>gi|254780312|ref|YP_003064725.1| response regulator receiver protein [Candidatus Liberibacter asiaticus str. psy62] Length = 122 | Back alignment |
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Score = 40.4 bits (93), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Query: 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEIS 60 M +K+++ ED++ + + +GY + NG A + R+ +++ DI + E+ Sbjct: 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMD 60 Query: 61 GLEITKQIKE-DSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKY 119 G+E+ ++ E D +L+ + + A A+ D + +SKP L + + + Sbjct: 61 GIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKV---LSKPFHLRDLVNEVNRL 117 Query: 120 I 120 + Sbjct: 118 L 118 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 123 | two component response regulator [Candidatus Liberibact | |||
315122068 | 123 | two component response regulator [Candidatus Liberibact | 1 | 5e-59 | |
222148303 | 123 | two component response regulator [Agrobacterium vitis S | 1 | 3e-52 | |
15965046 | 123 | putative 2-component receiver domain protein [Sinorhizo | 1 | 1e-51 | |
227821648 | 149 | putative response regulator in two-component regulatory | 1 | 3e-51 | |
86357266 | 123 | two-component response regulator protein [Rhizobium etl | 1 | 3e-51 | |
319783843 | 123 | response regulator receiver [Mesorhizobium ciceri biova | 1 | 5e-51 | |
222085607 | 133 | two-component response regulator protein [Agrobacterium | 1 | 6e-51 | |
260463924 | 138 | response regulator receiver protein [Mesorhizobium oppo | 1 | 1e-50 | |
218678690 | 123 | response regulator receiver protein [Rhizobium etli CIA | 1 | 2e-50 | |
159184699 | 123 | two component response regulator [Agrobacterium tumefac | 1 | 2e-50 |
>gi|315122068|ref|YP_004062557.1| two component response regulator [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 123 | Back alignment and organism information |
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Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 112/123 (91%), Positives = 121/123 (98%) Query: 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEIS 60 M KKVMIVEDNELNMKLFRDLIETSGY+++QTR+G+EALE+ARQHKPD+IIMDIQL EIS Sbjct: 1 MPKKVMIVEDNELNMKLFRDLIETSGYMSIQTRSGLEALEIARQHKPDIIIMDIQLPEIS 60 Query: 61 GLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120 GLEITKQIKED+ELQ+IPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI Sbjct: 61 GLEITKQIKEDNELQDIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120 Query: 121 GEA 123 GEA Sbjct: 121 GEA 123 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|222148303|ref|YP_002549260.1| two component response regulator [Agrobacterium vitis S4] Length = 123 | Back alignment and organism information |
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>gi|15965046|ref|NP_385399.1| putative 2-component receiver domain protein [Sinorhizobium meliloti 1021] Length = 123 | Back alignment and organism information |
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>gi|227821648|ref|YP_002825618.1| putative response regulator in two-component regulatory system [Sinorhizobium fredii NGR234] Length = 149 | Back alignment and organism information |
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>gi|86357266|ref|YP_469158.1| two-component response regulator protein [Rhizobium etli CFN 42] Length = 123 | Back alignment and organism information |
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>gi|319783843|ref|YP_004143319.1| response regulator receiver [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 123 | Back alignment and organism information |
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>gi|222085607|ref|YP_002544137.1| two-component response regulator protein [Agrobacterium radiobacter K84] Length = 133 | Back alignment and organism information |
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>gi|260463924|ref|ZP_05812120.1| response regulator receiver protein [Mesorhizobium opportunistum WSM2075] Length = 138 | Back alignment and organism information |
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>gi|218678690|ref|ZP_03526587.1| response regulator receiver protein [Rhizobium etli CIAT 894] Length = 123 | Back alignment and organism information |
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>gi|159184699|ref|NP_354304.2| two component response regulator [Agrobacterium tumefaciens str. C58] Length = 123 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 123 | two component response regulator [Candidatus Liberibact | ||
PRK11107 | 919 | PRK11107, PRK11107, hybrid sensory histidine kinase Bar | 7e-21 | |
pfam00072 | 111 | pfam00072, Response_reg, Response regulator receiver do | 4e-20 | |
COG0784 | 130 | COG0784, CheY, FOG: CheY-like receiver [Signal transduc | 2e-16 | |
TIGR02154 | 226 | TIGR02154, PhoB, phosphate regulon transcriptional regu | 2e-16 | |
COG3437 | 360 | COG3437, COG3437, Response regulator containing a CheY- | 3e-15 | |
KOG0519 | 786 | KOG0519, KOG0519, KOG0519, Sensory transduction histidi | 2e-14 | |
PRK15347 | 921 | PRK15347, PRK15347, two component system sensor kinase | 3e-14 | |
PRK11091 | 779 | PRK11091, PRK11091, aerobic respiration control sensor | 4e-14 | |
PRK09581 | 457 | PRK09581, pleD, response regulator PleD; Reviewed | 1e-13 | |
COG0745 | 229 | COG0745, OmpR, Response regulators consisting of a CheY | 7e-13 | |
COG2204 | 464 | COG2204, AtoC, Response regulator containing CheY-like | 7e-13 | |
COG2197 | 211 | COG2197, CitB, Response regulator containing a CheY-lik | 3e-12 | |
COG4753 | 475 | COG4753, COG4753, Response regulator containing CheY-li | 2e-11 | |
TIGR02956 | 968 | TIGR02956, TMAO_torS, TMAO reductase sytem sensor TorS | 2e-11 | |
COG2201 | 350 | COG2201, CheB, Chemotaxis response regulator containing | 3e-11 | |
COG3706 | 435 | COG3706, PleD, Response regulator containing a CheY-lik | 2e-10 | |
PRK11361 | 457 | PRK11361, PRK11361, acetoacetate metabolism regulatory | 5e-10 | |
PRK09191 | 261 | PRK09191, PRK09191, two-component response regulator; P | 1e-09 | |
PRK10365 | 441 | PRK10365, PRK10365, transcriptional regulatory protein | 5e-09 | |
PRK00742 | 354 | PRK00742, PRK00742, chemotaxis-specific methylesterase; | 5e-09 | |
TIGR01387 | 218 | TIGR01387, cztR_silR_copR, heavy metal response regulat | 7e-09 | |
PRK10841 | 924 | PRK10841, PRK10841, hybrid sensory kinase in two-compon | 7e-09 | |
PRK10161 | 229 | PRK10161, PRK10161, transcriptional regulator PhoB; Pro | 7e-09 | |
CHL00148 | 240 | CHL00148, orf27, Ycf27; Reviewed | 2e-08 | |
PRK10710 | 240 | PRK10710, PRK10710, DNA-binding transcriptional regulat | 2e-08 | |
TIGR02875 | 262 | TIGR02875, spore_0_A, sporulation transcription factor | 3e-08 | |
PRK10610 | 129 | PRK10610, PRK10610, chemotaxis regulatory protein CheY; | 3e-08 | |
COG3947 | 361 | COG3947, COG3947, Response regulator containing CheY-li | 5e-08 | |
COG4566 | 202 | COG4566, TtrR, Response regulator [Signal transduction | 7e-08 | |
COG3707 | 194 | COG3707, AmiR, Response regulator with putative antiter | 1e-07 | |
PRK11517 | 223 | PRK11517, PRK11517, transcriptional regulatory protein | 1e-07 | |
COG4565 | 224 | COG4565, CitB, Response regulator of citrate/malate met | 4e-07 | |
PRK11697 | 238 | PRK11697, PRK11697, putative two-component response-reg | 6e-07 | |
PRK15369 | 211 | PRK15369, PRK15369, two component system sensor kinase | 8e-07 | |
PRK10529 | 225 | PRK10529, PRK10529, DNA-binding transcriptional activat | 1e-06 | |
PRK12555 | 337 | PRK12555, PRK12555, chemotaxis-specific methylesterase; | 1e-06 | |
PRK10403 | 215 | PRK10403, PRK10403, transcriptional regulator NarP; Pro | 1e-06 | |
PRK10766 | 221 | PRK10766, PRK10766, DNA-binding transcriptional regulat | 2e-06 | |
PRK10651 | 216 | PRK10651, PRK10651, transcriptional regulator NarL; Pro | 4e-06 | |
PLN03029 | 222 | PLN03029, PLN03029, type-a response regulator protein; | 6e-06 | |
COG4567 | 182 | COG4567, COG4567, Response regulator consisting of a Ch | 7e-06 | |
PRK13435 | 145 | PRK13435, PRK13435, response regulator; Provisional | 8e-06 | |
PRK09836 | 227 | PRK09836, PRK09836, DNA-binding transcriptional activat | 9e-06 | |
COG3706 | 435 | COG3706, PleD, Response regulator containing a CheY-lik | 1e-05 | |
PRK15115 | 444 | PRK15115, PRK15115, response regulator GlrR; Provisiona | 3e-05 | |
COG3279 | 244 | COG3279, LytT, Response regulator of the LytR/AlgR fami | 4e-05 | |
TIGR03787 | 227 | TIGR03787, marine_sort_RR, proteobacterial dedicated so | 4e-05 | |
PRK10693 | 303 | PRK10693, PRK10693, response regulator of RpoS; Provisi | 1e-04 | |
PRK09483 | 217 | PRK09483, PRK09483, response regulator; Provisional | 1e-04 | |
PRK10923 | 469 | PRK10923, glnG, nitrogen regulation protein NR(I); Prov | 1e-04 | |
PRK10955 | 232 | PRK10955, PRK10955, DNA-binding transcriptional regulat | 2e-04 | |
TIGR01818 | 463 | TIGR01818, ntrC, nitrogen regulation protein NR(I) | 3e-04 | |
PRK09958 | 204 | PRK09958, PRK09958, DNA-binding transcriptional activat | 6e-04 | |
PRK15479 | 221 | PRK15479, PRK15479, transcriptional regulatory protein | 0.001 | |
cd00156 | 113 | cd00156, REC, Signal receiver domain; originally though | 3e-20 | |
smart00448 | 55 | smart00448, REC, cheY-homologous receiver domain | 6e-11 | |
PRK11173 | 237 | PRK11173, PRK11173, two-component response regulator; P | 0.001 | |
PRK11083 | 228 | PRK11083, PRK11083, DNA-binding response regulator CreB | 6e-08 |
>gnl|CDD|182968 PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
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>gnl|CDD|143854 pfam00072, Response_reg, Response regulator receiver domain | Back alignment and domain information |
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>gnl|CDD|31127 COG0784, CheY, FOG: CheY-like receiver [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|131209 TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB | Back alignment and domain information |
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>gnl|CDD|33243 COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|35739 KOG0519, KOG0519, KOG0519, Sensory transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|185245 PRK15347, PRK15347, two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
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>gnl|CDD|182956 PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
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>gnl|CDD|181966 PRK09581, pleD, response regulator PleD; Reviewed | Back alignment and domain information |
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>gnl|CDD|31088 COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
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>gnl|CDD|32386 COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|32379 COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
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>gnl|CDD|34367 COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|163083 TIGR02956, TMAO_torS, TMAO reductase sytem sensor TorS | Back alignment and domain information |
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>gnl|CDD|32383 COG2201, CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|33501 COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|183099 PRK11361, PRK11361, acetoacetate metabolism regulatory protein AtoC; Provisional | Back alignment and domain information |
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>gnl|CDD|181686 PRK09191, PRK09191, two-component response regulator; Provisional | Back alignment and domain information |
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>gnl|CDD|182412 PRK10365, PRK10365, transcriptional regulatory protein ZraR; Provisional | Back alignment and domain information |
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>gnl|CDD|179106 PRK00742, PRK00742, chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
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>gnl|CDD|130454 TIGR01387, cztR_silR_copR, heavy metal response regulator | Back alignment and domain information |
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>gnl|CDD|182772 PRK10841, PRK10841, hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
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>gnl|CDD|182277 PRK10161, PRK10161, transcriptional regulator PhoB; Provisional | Back alignment and domain information |
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>gnl|CDD|164540 CHL00148, orf27, Ycf27; Reviewed | Back alignment and domain information |
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>gnl|CDD|182665 PRK10710, PRK10710, DNA-binding transcriptional regulator BaeR; Provisional | Back alignment and domain information |
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>gnl|CDD|131922 TIGR02875, spore_0_A, sporulation transcription factor Spo0A | Back alignment and domain information |
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>gnl|CDD|170568 PRK10610, PRK10610, chemotaxis regulatory protein CheY; Provisional | Back alignment and domain information |
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>gnl|CDD|33728 COG3947, COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|34204 COG4566, TtrR, Response regulator [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|33502 COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|183172 PRK11517, PRK11517, transcriptional regulatory protein YedW; Provisional | Back alignment and domain information |
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>gnl|CDD|34203 COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|183278 PRK11697, PRK11697, putative two-component response-regulatory protein YehT; Provisional | Back alignment and domain information |
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>gnl|CDD|185267 PRK15369, PRK15369, two component system sensor kinase SsrB; Provisional | Back alignment and domain information |
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>gnl|CDD|182522 PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional | Back alignment and domain information |
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>gnl|CDD|183591 PRK12555, PRK12555, chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
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>gnl|CDD|182431 PRK10403, PRK10403, transcriptional regulator NarP; Provisional | Back alignment and domain information |
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>gnl|CDD|182711 PRK10766, PRK10766, DNA-binding transcriptional regulator TorR; Provisional | Back alignment and domain information |
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>gnl|CDD|182619 PRK10651, PRK10651, transcriptional regulator NarL; Provisional | Back alignment and domain information |
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>gnl|CDD|178599 PLN03029, PLN03029, type-a response regulator protein; Provisional | Back alignment and domain information |
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>gnl|CDD|34205 COG4567, COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
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>gnl|CDD|184052 PRK13435, PRK13435, response regulator; Provisional | Back alignment and domain information |
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>gnl|CDD|182102 PRK09836, PRK09836, DNA-binding transcriptional activator CusR; Provisional | Back alignment and domain information |
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>gnl|CDD|33501 COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|185070 PRK15115, PRK15115, response regulator GlrR; Provisional | Back alignment and domain information |
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>gnl|CDD|33090 COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
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>gnl|CDD|163499 TIGR03787, marine_sort_RR, proteobacterial dedicated sortase system response regulator | Back alignment and domain information |
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>gnl|CDD|182652 PRK10693, PRK10693, response regulator of RpoS; Provisional | Back alignment and domain information |
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>gnl|CDD|181897 PRK09483, PRK09483, response regulator; Provisional | Back alignment and domain information |
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>gnl|CDD|182842 PRK10923, glnG, nitrogen regulation protein NR(I); Provisional | Back alignment and domain information |
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>gnl|CDD|182864 PRK10955, PRK10955, DNA-binding transcriptional regulator CpxR; Provisional | Back alignment and domain information |
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>gnl|CDD|162545 TIGR01818, ntrC, nitrogen regulation protein NR(I) | Back alignment and domain information |
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>gnl|CDD|182168 PRK09958, PRK09958, DNA-binding transcriptional activator EvgA; Provisional | Back alignment and domain information |
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>gnl|CDD|185376 PRK15479, PRK15479, transcriptional regulatory protein TctD; Provisional | Back alignment and domain information |
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>gnl|CDD|29071 cd00156, REC, Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers | Back alignment and domain information |
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>gnl|CDD|128724 smart00448, REC, cheY-homologous receiver domain | Back alignment and domain information |
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>gnl|CDD|183013 PRK11173, PRK11173, two-component response regulator; Provisional | Back alignment and domain information |
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>gnl|CDD|182950 PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 123 | two component response regulator [Candidatus Liberibact | ||
TIGR02154 | 226 | PhoB phosphate regulon transcriptional regulatory prote | 100.0 | |
PRK11107 | 920 | hybrid sensory histidine kinase BarA; Provisional | 100.0 | |
PRK09581 | 457 | pleD response regulator PleD; Reviewed | 100.0 | |
PRK10841 | 947 | hybrid sensory kinase in two-component regulatory syste | 100.0 | |
PRK10161 | 229 | transcriptional regulator PhoB; Provisional | 100.0 | |
PRK11091 | 779 | aerobic respiration control sensor protein ArcB; Provis | 100.0 | |
PRK09959 | 1197 | hybrid sensory histidine kinase in two-component regula | 99.97 | |
PRK10610 | 129 | chemotaxis regulatory protein CheY; Provisional | 99.97 | |
PRK10693 | 337 | response regulator of RpoS; Provisional | 99.97 | |
PRK10923 | 469 | glnG nitrogen regulation protein NR(I); Provisional | 99.97 | |
TIGR01387 | 219 | cztR_silR_copR heavy metal response regulator; InterPro | 99.97 | |
CHL00148 | 240 | orf27 Ycf27; Reviewed | 99.97 | |
PRK11466 | 912 | hybrid sensory histidine kinase TorS; Provisional | 99.97 | |
PRK11083 | 229 | DNA-binding response regulator CreB; Provisional | 99.97 | |
PRK09836 | 226 | DNA-binding transcriptional activator CusR; Provisional | 99.97 | |
PRK10336 | 219 | DNA-binding transcriptional regulator QseB; Provisional | 99.97 | |
PRK10701 | 240 | DNA-binding transcriptional regulator RstA; Provisional | 99.97 | |
pfam00072 | 111 | Response_reg Response regulator receiver domain. This d | 99.97 | |
PRK11517 | 223 | transcriptional regulatory protein YedW; Provisional | 99.96 | |
PRK11361 | 457 | acetoacetate metabolism regulatory protein AtoC; Provis | 99.96 | |
PRK09468 | 239 | ompR osmolarity response regulator; Provisional | 99.96 | |
PRK10955 | 232 | DNA-binding transcriptional regulator CpxR; Provisional | 99.96 | |
PRK10529 | 225 | DNA-binding transcriptional activator KdpE; Provisional | 99.96 | |
PRK10766 | 224 | DNA-binding transcriptional regulator TorR; Provisional | 99.96 | |
cd00156 | 113 | REC Signal receiver domain; originally thought to be un | 99.96 | |
PRK11173 | 237 | two-component response regulator; Provisional | 99.96 | |
COG0745 | 229 | OmpR Response regulators consisting of a CheY-like rece | 99.96 | |
PRK10365 | 441 | transcriptional regulatory protein ZraR; Provisional | 99.96 | |
PRK13557 | 538 | histidine kinase; Provisional | 99.96 | |
PRK10046 | 225 | dpiA two-component response regulator DpiA; Provisional | 99.96 | |
PRK13856 | 241 | two-component response regulator VirG; Provisional | 99.96 | |
PRK10710 | 240 | DNA-binding transcriptional regulator BaeR; Provisional | 99.95 | |
PRK10643 | 222 | DNA-binding transcriptional regulator BasR; Provisional | 99.95 | |
KOG0519 | 786 | consensus | 99.95 | |
PRK10816 | 223 | DNA-binding transcriptional regulator PhoP; Provisional | 99.95 | |
PRK09390 | 202 | fixJ response regulator FixJ; Provisional | 99.95 | |
PRK10430 | 239 | DNA-binding transcriptional activator DcuR; Provisional | 99.94 | |
TIGR02875 | 270 | spore_0_A sporulation transcription factor Spo0A; Inter | 99.94 | |
COG2204 | 464 | AtoC Response regulator containing CheY-like receiver, | 99.94 | |
COG4753 | 475 | Response regulator containing CheY-like receiver domain | 99.94 | |
TIGR02956 | 1052 | TMAO_torS TMAO reductase sytem sensor TorS; InterPro: I | 99.94 | |
PRK13435 | 141 | response regulator; Provisional | 99.93 | |
COG3437 | 360 | Response regulator containing a CheY-like receiver doma | 99.92 | |
PRK00742 | 345 | chemotaxis-specific methylesterase; Provisional | 99.92 | |
TIGR01818 | 471 | ntrC nitrogen regulation protein NR(I); InterPro: IPR01 | 99.92 | |
COG3706 | 435 | PleD Response regulator containing a CheY-like receiver | 99.92 | |
PRK12555 | 340 | chemotaxis-specific methylesterase; Provisional | 99.9 | |
PRK09958 | 204 | DNA-binding transcriptional activator EvgA; Provisional | 99.89 | |
PRK09483 | 216 | response regulator; Provisional | 99.89 | |
PRK10651 | 216 | transcriptional regulator NarL; Provisional | 99.88 | |
PRK10403 | 215 | transcriptional regulator NarP; Provisional | 99.88 | |
COG4565 | 224 | CitB Response regulator of citrate/malate metabolism [T | 99.86 | |
COG4566 | 202 | TtrR Response regulator [Signal transduction mechanisms | 99.86 | |
PRK09935 | 210 | transcriptional regulator FimZ; Provisional | 99.86 | |
PRK10360 | 196 | DNA-binding transcriptional activator UhpA; Provisional | 99.86 | |
COG2197 | 211 | CitB Response regulator containing a CheY-like receiver | 99.85 | |
COG0784 | 130 | CheY FOG: CheY-like receiver [Signal transduction mecha | 99.84 | |
PRK13837 | 831 | two-component VirA-like sensor kinase; Provisional | 99.84 | |
PRK10840 | 216 | transcriptional regulator RcsB; Provisional | 99.83 | |
PRK11697 | 239 | putative two-component response-regulatory protein YehT | 99.83 | |
COG3947 | 361 | Response regulator containing CheY-like receiver and SA | 99.8 | |
PRK09191 | 261 | two-component response regulator; Provisional | 99.8 | |
COG2201 | 350 | CheB Chemotaxis response regulator containing a CheY-li | 99.74 | |
TIGR02915 | 451 | PEP_resp_reg putative PEP-CTERM system response regulat | 99.73 | |
COG4567 | 182 | Response regulator consisting of a CheY-like receiver d | 99.69 | |
PRK10100 | 216 | DNA-binding transcriptional regulator CsgD; Provisional | 99.67 | |
PRK13558 | 674 | bacterio-opsin activator; Provisional | 99.62 | |
COG3707 | 194 | AmiR Response regulator with putative antiterminator ou | 99.61 | |
PRK11475 | 205 | DNA-binding transcriptional activator BglJ; Provisional | 99.47 | |
COG3279 | 244 | LytT Response regulator of the LytR/AlgR family [Transc | 99.37 | |
PRK09581 | 457 | pleD response regulator PleD; Reviewed | 99.31 | |
PRK11107 | 920 | hybrid sensory histidine kinase BarA; Provisional | 99.28 | |
COG3706 | 435 | PleD Response regulator containing a CheY-like receiver | 99.22 | |
pfam06490 | 109 | FleQ Flagellar regulatory protein FleQ. This domain is | 98.6 | |
cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This domain bi | 97.24 | |
TIGR01815 | 726 | TrpE-clade3 anthranilate synthase; InterPro: IPR010112 | 97.03 | |
cd02072 | 128 | Glm_B12_BD B12 binding domain of glutamate mutase (Glm) | 96.35 | |
COG4999 | 140 | Uncharacterized domain of BarA-like signal transduction | 96.25 | |
PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 96.2 | |
cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of corrinoi | 95.82 | |
COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit | 95.82 | |
cd02071 | 122 | MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding | 95.25 | |
PRK07206 | 415 | hypothetical protein; Provisional | 94.54 | |
pfam00563 | 233 | EAL EAL domain. This domain is found in diverse bacteri | 94.41 | |
PRK09426 | 715 | methylmalonyl-CoA mutase; Reviewed | 94.11 | |
PRK10551 | 518 | hypothetical protein; Provisional | 92.33 | |
cd01948 | 240 | EAL EAL domain. This domain is found in diverse bacteri | 91.51 | |
smart00052 | 241 | EAL Putative diguanylate phosphodiesterase. Putative di | 91.29 | |
pfam05582 | 287 | Peptidase_U57 YabG peptidase U57. YabG is a protease in | 91.21 | |
PRK09776 | 1116 | putative sensor protein; Provisional | 91.11 | |
pfam02310 | 121 | B12-binding B12 binding domain. This domain binds to B1 | 91.03 | |
cd02068 | 127 | radical_SAM_B12_BD B12 binding domain_like associated w | 90.87 | |
TIGR02855 | 292 | spore_yabG sporulation peptidase YabG; InterPro: IPR008 | 90.86 | |
PRK05928 | 252 | hemD uroporphyrinogen-III synthase; Reviewed | 90.65 | |
COG2200 | 256 | Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Si | 90.16 | |
PRK10060 | 663 | RNase II stability modulator; Provisional | 90.01 | |
smart00448 | 55 | REC cheY-homologous receiver domain. CheY regulates the | 99.14 | |
PRK13566 | 724 | anthranilate synthase; Provisional | 96.97 | |
pfam03709 | 111 | OKR_DC_1_N Orn/Lys/Arg decarboxylase, N-terminal domain | 96.61 | |
PRK09522 | 531 | bifunctional anthranilate synthase/anthranilate phospho | 95.38 | |
PRK05637 | 208 | anthranilate synthase component II; Provisional | 95.28 | |
COG0512 | 191 | PabA Anthranilate/para-aminobenzoate synthases componen | 94.38 | |
PRK06895 | 191 | para-aminobenzoate synthase component II; Provisional | 92.92 | |
PRK00758 | 184 | GMP synthase subunit A; Validated | 92.31 |
>TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB; InterPro: IPR011879 PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion | Back alignment and domain information |
---|
>PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
---|
>PRK09581 pleD response regulator PleD; Reviewed | Back alignment and domain information |
---|
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
---|
>PRK10161 transcriptional regulator PhoB; Provisional | Back alignment and domain information |
---|
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
---|
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
---|
>PRK10610 chemotaxis regulatory protein CheY; Provisional | Back alignment and domain information |
---|
>PRK10693 response regulator of RpoS; Provisional | Back alignment and domain information |
---|
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional | Back alignment and domain information |
---|
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region | Back alignment and domain information |
---|
>CHL00148 orf27 Ycf27; Reviewed | Back alignment and domain information |
---|
>PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
---|
>PRK11083 DNA-binding response regulator CreB; Provisional | Back alignment and domain information |
---|
>PRK09836 DNA-binding transcriptional activator CusR; Provisional | Back alignment and domain information |
---|
>PRK10336 DNA-binding transcriptional regulator QseB; Provisional | Back alignment and domain information |
---|
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional | Back alignment and domain information |
---|
>pfam00072 Response_reg Response regulator receiver domain | Back alignment and domain information |
---|
>PRK11517 transcriptional regulatory protein YedW; Provisional | Back alignment and domain information |
---|
>PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional | Back alignment and domain information |
---|
>PRK09468 ompR osmolarity response regulator; Provisional | Back alignment and domain information |
---|
>PRK10955 DNA-binding transcriptional regulator CpxR; Provisional | Back alignment and domain information |
---|
>PRK10529 DNA-binding transcriptional activator KdpE; Provisional | Back alignment and domain information |
---|
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional | Back alignment and domain information |
---|
>cd00156 REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers | Back alignment and domain information |
---|
>PRK11173 two-component response regulator; Provisional | Back alignment and domain information |
---|
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
---|
>PRK10365 transcriptional regulatory protein ZraR; Provisional | Back alignment and domain information |
---|
>PRK13557 histidine kinase; Provisional | Back alignment and domain information |
---|
>PRK10046 dpiA two-component response regulator DpiA; Provisional | Back alignment and domain information |
---|
>PRK13856 two-component response regulator VirG; Provisional | Back alignment and domain information |
---|
>PRK10710 DNA-binding transcriptional regulator BaeR; Provisional | Back alignment and domain information |
---|
>PRK10643 DNA-binding transcriptional regulator BasR; Provisional | Back alignment and domain information |
---|
>KOG0519 consensus | Back alignment and domain information |
---|
>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional | Back alignment and domain information |
---|
>PRK09390 fixJ response regulator FixJ; Provisional | Back alignment and domain information |
---|
>PRK10430 DNA-binding transcriptional activator DcuR; Provisional | Back alignment and domain information |
---|
>TIGR02875 spore_0_A sporulation transcription factor Spo0A; InterPro: IPR012052 Members of this group are response regulators/transcription factors that contain CheY-like receiver (phosphoacceptor) domain and a unique DNA-binding domain | Back alignment and domain information |
---|
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
---|
>COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] | Back alignment and domain information |
---|
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS; InterPro: IPR014302 This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC) | Back alignment and domain information |
---|
>PRK13435 response regulator; Provisional | Back alignment and domain information |
---|
>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK00742 chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
---|
>TIGR01818 ntrC nitrogen regulation protein NR(I); InterPro: IPR010114 This entry represents Nitrogen regulatory protein C (NtrC), which is a bacterial enhancer-binding protein that activates the transcription of genes encoding enzymes required for nitrogen metabolism | Back alignment and domain information |
---|
>COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK12555 chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
---|
>PRK09958 DNA-binding transcriptional activator EvgA; Provisional | Back alignment and domain information |
---|
>PRK09483 response regulator; Provisional | Back alignment and domain information |
---|
>PRK10651 transcriptional regulator NarL; Provisional | Back alignment and domain information |
---|
>PRK10403 transcriptional regulator NarP; Provisional | Back alignment and domain information |
---|
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
---|
>COG4566 TtrR Response regulator [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK09935 transcriptional regulator FimZ; Provisional | Back alignment and domain information |
---|
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional | Back alignment and domain information |
---|
>COG2197 CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
---|
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
---|
>PRK10840 transcriptional regulator RcsB; Provisional | Back alignment and domain information |
---|
>PRK11697 putative two-component response-regulatory protein YehT; Provisional | Back alignment and domain information |
---|
>COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK09191 two-component response regulator; Provisional | Back alignment and domain information |
---|
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
---|
>TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator; InterPro: IPR014264 Members of this protein family share full-length homology with (but do not include) the acetoacetate metabolism regulatory protein AtoC (see Q06065 from SWISSPROT) | Back alignment and domain information |
---|
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
---|
>PRK10100 DNA-binding transcriptional regulator CsgD; Provisional | Back alignment and domain information |
---|
>PRK13558 bacterio-opsin activator; Provisional | Back alignment and domain information |
---|
>COG3707 AmiR Response regulator with putative antiterminator output domain [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK11475 DNA-binding transcriptional activator BglJ; Provisional | Back alignment and domain information |
---|
>COG3279 LytT Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK09581 pleD response regulator PleD; Reviewed | Back alignment and domain information |
---|
>PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
---|
>COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
---|
>pfam06490 FleQ Flagellar regulatory protein FleQ | Back alignment and domain information |
---|
>cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
---|
>TIGR01815 TrpE-clade3 anthranilate synthase; InterPro: IPR010112 This entry represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium) | Back alignment and domain information |
---|
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm) | Back alignment and domain information |
---|
>COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
---|
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
---|
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
---|
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain | Back alignment and domain information |
---|
>PRK07206 hypothetical protein; Provisional | Back alignment and domain information |
---|
>pfam00563 EAL EAL domain | Back alignment and domain information |
---|
>PRK09426 methylmalonyl-CoA mutase; Reviewed | Back alignment and domain information |
---|
>PRK10551 hypothetical protein; Provisional | Back alignment and domain information |
---|
>cd01948 EAL EAL domain | Back alignment and domain information |
---|
>smart00052 EAL Putative diguanylate phosphodiesterase | Back alignment and domain information |
---|
>pfam05582 Peptidase_U57 YabG peptidase U57 | Back alignment and domain information |
---|
>PRK09776 putative sensor protein; Provisional | Back alignment and domain information |
---|
>pfam02310 B12-binding B12 binding domain | Back alignment and domain information |
---|
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain | Back alignment and domain information |
---|
>TIGR02855 spore_yabG sporulation peptidase YabG; InterPro: IPR008764 Peptidases are grouped into clans and families | Back alignment and domain information |
---|
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed | Back alignment and domain information |
---|
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms] | Back alignment and domain information |
---|
>PRK10060 RNase II stability modulator; Provisional | Back alignment and domain information |
---|
>smart00448 REC cheY-homologous receiver domain | Back alignment and domain information |
---|
>PRK13566 anthranilate synthase; Provisional | Back alignment and domain information |
---|
>pfam03709 OKR_DC_1_N Orn/Lys/Arg decarboxylase, N-terminal domain | Back alignment and domain information |
---|
>PRK09522 bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
---|
>PRK05637 anthranilate synthase component II; Provisional | Back alignment and domain information |
---|
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
---|
>PRK06895 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
---|
>PRK00758 GMP synthase subunit A; Validated | Back alignment and domain information |
---|
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 123 | two component response regulator [Candidatus Liberibact | ||
1zes_A | 125 | Bef3- Activated Phob Receiver Domain Length = 125 | 2e-40 | |
2iyn_A | 124 | The Co-Factor-Induced Pre-Active Conformation In Ph | 3e-40 | |
1b00_A | 127 | Phob Receiver Domain From Escherichia Coli Length = | 4e-40 | |
1mvo_A | 136 | Crystal Structure Of The Phop Receiver Domain From | 5e-40 | |
1nxo_A | 120 | Micarec Ph7.0 Length = 120 | 2e-39 | |
2jba_A | 127 | Phob Response Regulator Receiver Domain Constitutiv | 3e-39 | |
1nxt_A | 120 | Micarec Ph 4.0 Length = 120 | 3e-39 | |
2jba_B | 127 | Phob Response Regulator Receiver Domain Constitutiv | 4e-39 | |
3f6p_A | 120 | Crystal Structure Of Unphosphorelated Receiver Doma | 3e-38 | |
2jb9_A | 127 | Phob Response Regulator Receiver Domain Constitutiv | 3e-38 | |
2zwm_A | 130 | Crystal Structure Of Yycf Receiver Domain From Baci | 3e-38 | |
2wb4_A | 459 | Activated Diguanylate Cyclase Pled In Complex With | 2e-36 | |
2wb4_A | 459 | Activated Diguanylate Cyclase Pled In Complex With | 2e-12 | |
3dge_C | 122 | Structure Of A Histidine Kinase-Response Regulator | 9e-36 | |
3gl9_A | 122 | The Structure Of A Histidine Kinase-Response Regula | 1e-35 | |
1m5t_A | 124 | Crystal Structure Of The Response Regulator Divk Le | 2e-35 | |
1w25_A | 459 | Response Regulator Pled In Complex With C-Digmp Len | 5e-35 | |
1w25_A | 459 | Response Regulator Pled In Complex With C-Digmp Len | 3e-12 | |
2oqr_A | 230 | The Structure Of The Response Regulator Regx3 From | 9e-35 |
>gi|78101053|pdb|1ZES|A Chain A, Bef3- Activated Phob Receiver Domain Length = 125 | Back alignment and structure |
Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 65/122 (53%) Query: 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEIS 60 M +++++VED ++ ++E +G+ ++ + A+ + PD+I++D L S Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS 60 Query: 61 GLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120 G++ K +K +S ++IPV+ +TA + D R + G + YI+KP S + IK + Sbjct: 61 GIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM 120 Query: 121 GE 122 Sbjct: 121 RR 122 |
>gi|114794859|pdb|2IYN|A Chain A, The Co-Factor-Induced Pre-Active Conformation In Phob Length = 124 | Back alignment and structure |
gi|6573458|pdb|1B00|A Chain A, Phob Receiver Domain From Escherichia Coli Length = 127 | Back alignment and structure |
>gi|24987831|pdb|1MVO|A Chain A, Crystal Structure Of The Phop Receiver Domain From Bacillus Subtilis Length = 136 | Back alignment and structure |
>gi|46014953|pdb|1NXO|A Chain A, Micarec Ph7.0 Length = 120 | Back alignment and structure |
>gi|126031095|pdb|2JBA|A Chain A, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D53a And Y102c Length = 127 | Back alignment and structure |
>gi|46014956|pdb|1NXT|A Chain A, Micarec Ph 4.0 Length = 120 | Back alignment and structure |
>gi|126031096|pdb|2JBA|B Chain B, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D53a And Y102c Length = 127 | Back alignment and structure |
>gi|290560102|pdb|3F6P|A Chain A, Crystal Structure Of Unphosphorelated Receiver Domain Of Yycf Length = 120 | Back alignment and structure |
>gi|126031093|pdb|2JB9|A Chain A, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D10a And D53e. Length = 127 | Back alignment and structure |
>gi|254220896|pdb|2ZWM|A Chain A, Crystal Structure Of Yycf Receiver Domain From Bacillus Subtilis Length = 130 | Back alignment and structure |
>gi|294979306|pdb|2WB4|A Chain A, Activated Diguanylate Cyclase Pled In Complex With C-Di-Gmp Length = 459 | Back alignment and structure |
>gi|294979306|pdb|2WB4|A Chain A, Activated Diguanylate Cyclase Pled In Complex With C-Di-Gmp Length = 459 | Back alignment and structure |
gi|251836870|pdb|3DGE|C Chain C, Structure Of A Histidine Kinase-Response Regulator Complex Reveals Insights Into Two-Component Signaling And A Novel Cis-Autophosphorylation Mechanism Length = 122 | Back alignment and structure |
>gi|262118598|pdb|3GL9|A Chain A, The Structure Of A Histidine Kinase-Response Regulator Complex Sheds Light Into Two-Component Signaling And Reveals A Novel Cis Autophosphorylation Mechanism Length = 122 | Back alignment and structure |
>gi|27065585|pdb|1M5T|A Chain A, Crystal Structure Of The Response Regulator Divk Length = 124 | Back alignment and structure |
>gi|56966618|pdb|1W25|A Chain A, Response Regulator Pled In Complex With C-Digmp Length = 459 | Back alignment and structure |
>gi|56966618|pdb|1W25|A Chain A, Response Regulator Pled In Complex With C-Digmp Length = 459 | Back alignment and structure |
>gi|158429258|pdb|2OQR|A Chain A, The Structure Of The Response Regulator Regx3 From Mycobacterium Tuberculosis Length = 230 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 123 | two component response regulator [Candidatus Liberibact | ||
1mb3_A | 124 | Cell division response regulator DIVK; signal transduct | 8e-29 | |
1w25_A | 459 | Stalked-cell differentiation controlling protein; two-c | 4e-26 | |
1w25_A | 459 | Stalked-cell differentiation controlling protein; two-c | 2e-09 | |
3m6m_D | 143 | Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA h | 3e-24 | |
3nhm_A | 133 | Response regulator; protein structure initiative II(PSI | 3e-24 | |
3lte_A | 132 | Response regulator; structural genomics, PSI, protein s | 2e-23 | |
3f6p_A | 120 | Transcriptional regulatory protein YYCF; unphosphorelat | 2e-23 | |
3eq2_A | 394 | Probable two-component response regulator; adaptor sigm | 8e-23 | |
3i42_A | 127 | Response regulator receiver domain protein (CHEY- like) | 8e-23 | |
1jbe_A | 128 | Chemotaxis protein CHEY; signaling protein; 1.08A {Esch | 9e-23 | |
3h1g_A | 129 | Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cy | 2e-22 | |
3kht_A | 144 | Response regulator; PSI-II, structural genomics, protei | 1e-21 | |
3bre_A | 358 | Probable two-component response regulator; protein-nucl | 1e-21 | |
2ayx_A | 254 | Sensor kinase protein RCSC; two independent structural | 1e-21 | |
2zwm_A | 130 | Transcriptional regulatory protein YYCF; two-component | 2e-21 | |
1k66_A | 149 | Phytochrome response regulator RCPB; CHEY homologue, ho | 2e-21 | |
1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylated asp | 3e-21 | |
3b2n_A | 133 | Uncharacterized protein Q99UF4; structural genomics, PS | 6e-21 | |
3lua_A | 140 | Response regulator receiver protein; two-component sign | 1e-20 | |
1srr_A | 124 | SPO0F, sporulation response regulatory protein; asparta | 1e-20 | |
1p6q_A | 129 | CHEY2; chemotaxis, signal transduction, response regula | 1e-20 | |
1i3c_A | 149 | Response regulator RCP1; phytochrome, signaling protein | 2e-20 | |
3f6c_A | 134 | Positive transcription regulator EVGA; structural genom | 3e-20 | |
3hdg_A | 137 | Uncharacterized protein; two-component sensor activity, | 3e-20 | |
1mvo_A | 136 | PHOP response regulator; phosphate regulon, transcripti | 3e-20 | |
1dz3_A | 130 | Stage 0 sporulation protein A; response regulator, doma | 5e-20 | |
3gl9_A | 122 | Response regulator; beta-sheet, surrounded by alpha hel | 1e-19 | |
3cnb_A | 143 | DNA-binding response regulator, MERR family; signal rec | 4e-19 | |
3kyj_B | 145 | CHEY6 protein, putative histidine protein kinase; prote | 4e-19 | |
3eul_A | 152 | Possible nitrate/nitrite response transcriptional regul | 7e-19 | |
3c97_A | 140 | Signal transduction histidine kinase; structural genomi | 7e-19 | |
3hv2_A | 153 | Response regulator/HD domain protein; PSI-2, NYSGXRC, s | 8e-19 | |
1tmy_A | 120 | CHEY protein, TMY; chemotaxis, phosphoryl transfer, sig | 1e-18 | |
3grc_A | 140 | Sensor protein, kinase; protein structure initiative II | 2e-18 | |
1s8n_A | 205 | Putative antiterminator; structural genomics, transcrip | 2e-18 | |
1dcf_A | 136 | ETR1 protein; beta-alpha five sandwich; 2.50A {Arabidop | 2e-18 | |
1qkk_A | 155 | DCTD, C4-dicarboxylate transport transcriptional regula | 3e-18 | |
2jba_A | 127 | Phosphate regulon transcriptional regulatory protein PH | 3e-18 | |
1dc7_A | 124 | NTRC, nitrogen regulation protein; receiver domain, pho | 3e-18 | |
3n0r_A | 286 | Response regulator; sigma factor, receiver, two-compone | 4e-18 | |
3cu5_A | 141 | Two component transcriptional regulator, ARAC family; s | 4e-18 | |
2j48_A | 119 | Two-component sensor kinase; pseudo-receiver, circadian | 4e-18 | |
3heb_A | 152 | Response regulator receiver domain protein (CHEY); NYSG | 6e-18 | |
3hdv_A | 136 | Response regulator; PSI-II, structural genomics, protei | 7e-18 | |
3dzd_A | 368 | Transcriptional regulator (NTRC family); sigma43 activa | 7e-18 | |
2qsj_A | 154 | DNA-binding response regulator, LUXR family; structural | 9e-18 | |
2zay_A | 147 | Response regulator receiver protein; structural genomic | 2e-17 | |
3cz5_A | 153 | Two-component response regulator, LUXR family; structur | 2e-17 | |
3cg4_A | 142 | Response regulator receiver domain protein (CHEY- like) | 3e-17 | |
2gkg_A | 127 | Response regulator homolog; social motility, receiver d | 3e-17 | |
3luf_A | 259 | Two-component system response regulator/ggdef domain pr | 3e-17 | |
3kto_A | 136 | Response regulator receiver protein; PSI-II,structural | 3e-17 | |
3hzh_A | 157 | Chemotaxis response regulator (CHEY-3); phosphatase, co | 4e-17 | |
2qv0_A | 143 | Protein MRKE; structural genomics, transcription, PSI-2 | 5e-17 | |
2b4a_A | 138 | BH3024; 10175646, structural genomics, joint center for | 6e-17 | |
1a2o_A | 349 | CHEB methylesterase; bacterial chemotaxis, adaptation, | 6e-17 | |
3eqz_A | 135 | Response regulator; structural genomics, unknown functi | 8e-17 | |
2qvg_A | 143 | Two component response regulator; NYSGXRC, PSI-2, struc | 9e-17 | |
3a10_A | 116 | Response regulator; phosphoacceptor, signaling protein; | 1e-16 | |
3c3m_A | 138 | Response regulator receiver protein; structural genomic | 1e-16 | |
1ny5_A | 387 | Transcriptional regulator (NTRC family); AAA+ ATPase, s | 1e-16 | |
2a9o_A | 120 | Response regulator; essential protein, YYCF/YYCG homolo | 3e-16 | |
3eod_A | 130 | Protein HNR; response regulator, phosphoprotein, two-co | 4e-16 | |
3cg0_A | 140 | Response regulator receiver modulated diguanylate cycla | 6e-16 | |
3cfy_A | 137 | Putative LUXO repressor protein; structural genomics, u | 1e-15 | |
3gt7_A | 154 | Sensor protein; structural genomics, signal receiver do | 9e-15 | |
2r25_B | 133 | Osmosensing histidine protein kinase SLN1; alpha5-BETA5 | 1e-14 | |
2qxy_A | 142 | Response regulator; regulation of transcription, NYSGXR | 1e-14 | |
1zh2_A | 121 | KDP operon transcriptional regulatory protein KDPE; two | 2e-14 | |
2jk1_A | 139 | HUPR, hydrogenase transcriptional regulatory protein HU | 2e-14 | |
2qr3_A | 140 | Two-component system response regulator; structural gen | 3e-14 | |
3h5i_A | 140 | Response regulator/sensory box protein/ggdef domain pro | 4e-14 | |
2rjn_A | 154 | Response regulator receiver:metal-dependent phosphohydr | 7e-14 | |
3ilh_A | 146 | Two component response regulator; NYSGXRC, PSI-II, prot | 1e-13 | |
3crn_A | 132 | Response regulator receiver domain protein, CHEY- like; | 1e-13 | |
3kcn_A | 151 | Adenylate cyclase homolog; SGX, PSI 2, structural genom | 2e-13 | |
1zgz_A | 122 | Torcad operon transcriptional regulatory protein TORR; | 4e-13 | |
3cwo_X | 237 | Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, | 7e-13 | |
1xhf_A | 123 | DYE resistance, aerobic respiration control protein ARC | 7e-13 | |
2qzj_A | 136 | Two-component response regulator; 11017X, PSI-II, struc | 8e-13 | |
1dbw_A | 126 | Transcriptional regulatory protein FIXJ; doubly wound f | 9e-13 | |
2rdm_A | 132 | Response regulator receiver protein; structural genomic | 1e-12 | |
2pl1_A | 121 | Transcriptional regulatory protein PHOP; CHEY-like fold | 1e-12 | |
1qo0_D | 196 | AMIR; binding protein, gene regulator, receptor; 2.25A | 2e-11 | |
3klo_A | 225 | Transcriptional regulator VPST; REC domain, HTH domain, | 2e-11 | |
2gwr_A | 238 | DNA-binding response regulator MTRA; two-component regu | 4e-11 | |
1kgs_A | 225 | DRRD, DNA binding response regulator D; DNA-binding pro | 3e-10 | |
2oqr_A | 230 | Sensory transduction protein REGX3; response regulator, | 3e-10 | |
1p2f_A | 220 | Response regulator; DRRB, OMPR/PHOB, transcription; HET | 4e-10 | |
1yio_A | 208 | Response regulatory protein; transcription regulation, | 9e-10 | |
3jte_A | 143 | Response regulator receiver protein; structural genomic | 1e-09 | |
2pln_A | 137 | HP1043, response regulator; signaling protein; 1.80A {H | 6e-08 | |
1ys7_A | 233 | Transcriptional regulatory protein PRRA; response regul | 1e-07 | |
1a04_A | 215 | Nitrate/nitrite response regulator protein NARL; signal | 1e-05 | |
3luf_A | 259 | Two-component system response regulator/ggdef domain pr | 1e-10 | |
3c3w_A | 225 | Two component transcriptional regulatory protein DEVR; | 6e-08 | |
2hqr_A | 223 | Putative transcriptional regulator; phosporylation-inde | 5e-06 |
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A Length = 124 | Back alignment and structure |
---|
Score = 120 bits (303), Expect = 8e-29 Identities = 85/118 (72%), Positives = 102/118 (86%) Query: 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGL 62 KKV+IVEDNELNMKLF DL+E GY LQTR G+ AL +AR++KPD+I+MDIQL EISGL Sbjct: 2 KKVLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQLPEISGL 61 Query: 63 EITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120 E+TK +KED +L IPV+AVTAFAMKGDEERIR+GGCEAYISKPIS+ F+ETIK+ + Sbjct: 62 EVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLL 119 |
>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* Length = 459 | Back alignment and structure |
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>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* Length = 459 | Back alignment and structure |
---|
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV} Length = 143 | Back alignment and structure |
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>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus} Length = 133 | Back alignment and structure |
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>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, nysgrc, NEW YORK structural genomix research consortium; 2.00A {Bermanella marisrubri} Length = 132 | Back alignment and structure |
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>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A Length = 120 | Back alignment and structure |
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>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} Length = 394 | Back alignment and structure |
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>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} Length = 127 | Back alignment and structure |
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>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 1cye_A 2che_A 2chf_A 2pl9_A* 2pmc_A ... Length = 128 | Back alignment and structure |
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>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} PDB: 3gwg_A 3h1e_A 3h1f_A Length = 129 | Back alignment and structure |
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>3kht_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.10A {Hahella chejuensis kctc 2396} Length = 144 | Back alignment and structure |
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>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa PAO1} PDB: 3i5a_A* Length = 358 | Back alignment and structure |
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>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A Length = 254 | Back alignment and structure |
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>2zwm_A Transcriptional regulatory protein YYCF; two-component system, response regulator, dimerization domain, phosphorylation site, cytoplasm; 2.04A {Bacillus subtilis} Length = 130 | Back alignment and structure |
---|
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 Length = 149 | Back alignment and structure |
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>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 Length = 140 | Back alignment and structure |
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>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus} Length = 133 | Back alignment and structure |
---|
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} Length = 140 | Back alignment and structure |
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>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E Length = 124 | Back alignment and structure |
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>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A Length = 129 | Back alignment and structure |
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>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A Length = 149 | Back alignment and structure |
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>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12} Length = 134 | Back alignment and structure |
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>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} Length = 137 | Back alignment and structure |
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>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1 Length = 136 | Back alignment and structure |
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>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A* Length = 130 | Back alignment and structure |
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>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} PDB: 3dgf_C 3dge_C Length = 122 | Back alignment and structure |
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>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structure initiative, PSI-2; 2.00A {Colwellia psychrerythraea 34H} Length = 143 | Back alignment and structure |
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>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B* Length = 145 | Back alignment and structure |
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>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} Length = 152 | Back alignment and structure |
---|
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} Length = 140 | Back alignment and structure |
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>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} Length = 153 | Back alignment and structure |
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>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y Length = 120 | Back alignment and structure |
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>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} Length = 140 | Back alignment and structure |
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>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A Length = 205 | Back alignment and structure |
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>1dcf_A ETR1 protein; beta-alpha five sandwich; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2 Length = 136 | Back alignment and structure |
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>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A Length = 155 | Back alignment and structure |
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>2jba_A Phosphate regulon transcriptional regulatory protein PHOB; transcription factor, sensory transduction, phosphate regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A Length = 127 | Back alignment and structure |
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>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A* Length = 124 | Back alignment and structure |
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>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} Length = 286 | Back alignment and structure |
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>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141 | Back alignment and structure |
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>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} Length = 119 | Back alignment and structure |
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>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, protein structure initiative; 2.40A {Rhodospirillum rubrum atcc 11170} Length = 152 | Back alignment and structure |
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>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136 | Back alignment and structure |
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>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368 | Back alignment and structure |
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>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} Length = 154 | Back alignment and structure |
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>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, PSI-2, protein structure initiative; 2.00A {Desulfuromonas acetoxidans dsm 684} Length = 147 | Back alignment and structure |
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>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} Length = 153 | Back alignment and structure |
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>3cg4_A Response regulator receiver domain protein (CHEY- like); structural genomics, unknown function, uncharacterized protein; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} Length = 142 | Back alignment and structure |
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>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolution, signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A Length = 127 | Back alignment and structure |
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>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* Length = 259 | Back alignment and structure |
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>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} Length = 136 | Back alignment and structure |
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>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi} Length = 157 | Back alignment and structure |
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>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae} Length = 143 | Back alignment and structure |
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>2b4a_A BH3024; 10175646, structural genomics, joint center for structural genomics, JCSG, protein structure initiative PSI, unknown function; 2.42A {Bacillus halodurans c-125} SCOP: c.23.1.1 Length = 138 | Back alignment and structure |
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>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1 Length = 349 | Back alignment and structure |
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>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.15A {Colwellia psychrerythraea 34H} Length = 135 | Back alignment and structure |
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>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp} Length = 143 | Back alignment and structure |
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>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A* Length = 116 | Back alignment and structure |
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>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1} Length = 138 | Back alignment and structure |
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>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, dimer; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 1zy2_A* Length = 387 | Back alignment and structure |
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>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A* Length = 120 | Back alignment and structure |
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>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Length = 130 | Back alignment and structure |
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>3cg0_A Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; signal receiver domain; 2.15A {Desulfovibrio desulfuricans subsp} Length = 140 | Back alignment and structure |
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>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Length = 137 | Back alignment and structure |
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>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB} Length = 154 | Back alignment and structure |
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>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B Length = 133 | Back alignment and structure |
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>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} Length = 142 | Back alignment and structure |
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>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A Length = 121 | Back alignment and structure |
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>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HUPR1; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B Length = 139 | Back alignment and structure |
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>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46} Length = 140 | Back alignment and structure |
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>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Length = 140 | Back alignment and structure |
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>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92, PSI-2; 2.10A {Neptuniibacter caesariensis} Length = 154 | Back alignment and structure |
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>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein structure initiative, structural genomics; 2.59A {Cytophaga hutchinsonii atcc 33406} Length = 146 | Back alignment and structure |
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>3crn_A Response regulator receiver domain protein, CHEY- like; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1} Length = 132 | Back alignment and structure |
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>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica} Length = 151 | Back alignment and structure |
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>1zgz_A Torcad operon transcriptional regulatory protein TORR; two-component system, gene regulation, transcription factor, TMAO respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1 Length = 122 | Back alignment and structure |
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>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} Length = 237 | Back alignment and structure |
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