254780477
DSBA oxidoreductase
GeneID in NCBI database: | 8209466 | Locus tag: | CLIBASIA_01810 |
Protein GI in NCBI database: | 254780477 | Protein Accession: | YP_003064890.1 |
Gene range: | -(399166, 399864) | Protein Length: | 232aa |
Gene description: | DSBA oxidoreductase | ||
COG prediction: | [O] Protein-disulfide isomerase | ||
KEGG prediction: | DsbA oxidoreductase | ||
SEED prediction: | Periplasmic thiol:disulfide interchange protein DsbA | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | |||
315122067 | 228 | DSBA oxidoreductase [Candidatus Liberibacter solanacear | 1 | 2e-84 | |
227821137 | 268 | putative disulfide bond formation protein D [Sinorhizob | 1 | 1e-51 | |
150395769 | 269 | DSBA oxidoreductase [Sinorhizobium medicae WSM419] Leng | 1 | 3e-51 | |
15888143 | 226 | hypothetical protein Atu0800 [Agrobacterium tumefaciens | 1 | 3e-51 | |
15964683 | 269 | hypothetical protein SMc00023 [Sinorhizobium meliloti 1 | 1 | 1e-50 | |
325292182 | 226 | disulfide bond formation protein D [Agrobacterium sp. H | 1 | 2e-48 | |
110633124 | 229 | DSBA oxidoreductase [Mesorhizobium sp. BNC1] Length = 2 | 1 | 7e-47 | |
260460275 | 247 | DSBA oxidoreductase [Mesorhizobium opportunistum WSM207 | 1 | 1e-46 | |
163760360 | 251 | hypothetical protein HPDFL43_03616 [Hoeflea phototrophi | 1 | 1e-46 | |
86356645 | 259 | putative thiol-disulfide oxidoreductase protein [Rhizob | 1 | 5e-46 |
>gi|315122067|ref|YP_004062556.1| DSBA oxidoreductase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 228 | Back alignment and organism information |
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Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 152/225 (67%), Positives = 184/225 (81%) Query: 3 MSTTRIGVLGGIVLLFIASYFFYTRKGSALNELPIPDGVVDFRALLAASPSTMKDVSIGQ 62 M T +IG L V+ + S FFYT+ ++ N LP+P ++D LLAASP M+++SIG+ Sbjct: 1 MKTAKIGALCIAVVFVVGSVFFYTKSRNSSNALPLPYSMIDVDILLAASPHAMEEISIGR 60 Query: 63 KDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLAR 122 +DAP+T+VEYASMTCFHCAEFHNKTFK +EDKYIKTGK+R+I REFPLDSVST A MLAR Sbjct: 61 QDAPLTIVEYASMTCFHCAEFHNKTFKKIEDKYIKTGKVRFIFREFPLDSVSTAASMLAR 120 Query: 123 CAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDD 182 CAE R+ GGY+GFVS+LF KQ+DWI SKNYR+++ NMAK AGFS+NDFD+CL +Q+ILDD Sbjct: 121 CAENRVKGGYFGFVSMLFKKQNDWIESKNYRESMFNMAKIAGFSRNDFDSCLGNQSILDD 180 Query: 183 IKAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSMIQ 227 IK G K A E I+STP FFIGGNLYLGDMSE VFSKIIDSMI+ Sbjct: 181 IKTGNKIAVEKLLINSTPSFFIGGNLYLGDMSEEVFSKIIDSMIE 225 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|227821137|ref|YP_002825107.1| putative disulfide bond formation protein D [Sinorhizobium fredii NGR234] Length = 268 | Back alignment and organism information |
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>gi|150395769|ref|YP_001326236.1| DSBA oxidoreductase [Sinorhizobium medicae WSM419] Length = 269 | Back alignment and organism information |
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>gi|15888143|ref|NP_353824.1| hypothetical protein Atu0800 [Agrobacterium tumefaciens str. C58] Length = 226 | Back alignment and organism information |
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>gi|15964683|ref|NP_385036.1| hypothetical protein SMc00023 [Sinorhizobium meliloti 1021] Length = 269 | Back alignment and organism information |
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>gi|325292182|ref|YP_004278046.1| disulfide bond formation protein D [Agrobacterium sp. H13-3] Length = 226 | Back alignment and organism information |
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>gi|110633124|ref|YP_673332.1| DSBA oxidoreductase [Mesorhizobium sp. BNC1] Length = 229 | Back alignment and organism information |
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>gi|260460275|ref|ZP_05808527.1| DSBA oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 247 | Back alignment and organism information |
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>gi|163760360|ref|ZP_02167442.1| hypothetical protein HPDFL43_03616 [Hoeflea phototrophica DFL-43] Length = 251 | Back alignment and organism information |
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>gi|86356645|ref|YP_468537.1| putative thiol-disulfide oxidoreductase protein [Rhizobium etli CFN 42] Length = 259 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | ||
cd03023 | 154 | cd03023, DsbA_Com1_like, DsbA family, Com1-like subfami | 6e-09 | |
COG1651 | 244 | COG1651, DsbG, Protein-disulfide isomerase [Posttransla | 7e-21 | |
cd02972 | 98 | cd02972, DsbA_family, DsbA family; consists of DsbA and | 6e-04 |
>gnl|CDD|48572 cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti | Back alignment and domain information |
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>gnl|CDD|31837 COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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>gnl|CDD|73335 cd02972, DsbA_family, DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | ||
cd03023 | 154 | DsbA_Com1_like DsbA family, Com1-like subfamily; compos | 99.97 | |
cd03019 | 178 | DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monome | 99.96 | |
PRK10954 | 207 | periplasmic protein disulfide isomerase I; Provisional | 99.89 | |
COG1651 | 244 | DsbG Protein-disulfide isomerase [Posttranslational mod | 99.89 | |
pfam01323 | 191 | DSBA DSBA-like thioredoxin domain. This family contains | 99.75 | |
COG2761 | 225 | FrnE Predicted dithiol-disulfide isomerase involved in | 99.72 | |
cd03024 | 201 | DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-l | 99.72 | |
cd03020 | 197 | DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V- | 99.59 | |
PRK10877 | 232 | thiol:disulfide interchange protein DsbC; Provisional | 99.5 | |
PRK11657 | 253 | dsbG disulfide isomerase/thiol-disulfide oxidase; Provi | 99.46 | |
cd03025 | 193 | DsbA_FrnE_like DsbA family, FrnE-like subfamily; compos | 99.44 | |
cd03022 | 192 | DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxyl | 99.4 | |
cd02972 | 98 | DsbA_family DsbA family; consists of DsbA and DsbA-like | 99.36 | |
COG3917 | 203 | NahD 2-hydroxychromene-2-carboxylate isomerase [Seconda | 98.84 | |
cd03021 | 209 | DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase | 98.58 | |
PRK03147 | 176 | thiol-disulfide oxidoreductase; Provisional | 98.49 | |
cd02956 | 96 | ybbN ybbN protein family; ybbN is a hypothetical protei | 98.04 | |
cd02950 | 142 | TxlA TRX-like protein A (TxlA) family; TxlA was origina | 98.0 | |
cd02949 | 97 | TRX_NTR TRX domain, novel NADPH thioredoxin reductase ( | 97.91 | |
KOG0910 | 150 | consensus | 97.08 | |
KOG3160 | 220 | consensus | 96.57 | |
COG3531 | 212 | Predicted protein-disulfide isomerase [Posttranslationa | 98.4 | |
cd02951 | 125 | SoxW SoxW family; SoxW is a bacterial periplasmic TRX, | 98.02 | |
PRK10996 | 139 | thioredoxin 2; Provisional | 97.95 | |
PRK09381 | 109 | trxA thioredoxin; Provisional | 97.87 | |
pfam00085 | 104 | Thioredoxin Thioredoxin. Thioredoxins are small enzymes | 97.69 | |
COG2143 | 182 | Thioredoxin-related protein [Posttranslational modifica | 97.68 | |
cd03000 | 104 | PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of euk | 97.52 | |
cd02947 | 93 | TRX_family TRX family; composed of two groups: Group I, | 97.39 | |
cd02994 | 101 | PDI_a_TMX PDIa family, TMX subfamily; composed of prote | 97.33 | |
cd02997 | 104 | PDI_a_PDIR PDIa family, PDIR subfamily; composed of pro | 97.18 | |
cd02953 | 104 | DsbDgamma DsbD gamma family; DsbD gamma is the C-termin | 97.12 | |
TIGR00411 | 82 | redox_disulf_1 redox-active disulfide protein 1; InterP | 97.03 | |
cd02996 | 108 | PDI_a_ERp44 PDIa family, endoplasmic reticulum protein | 96.82 | |
cd02961 | 101 | PDI_a_family Protein Disulfide Isomerase (PDIa) family, | 96.79 | |
cd03001 | 103 | PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryo | 96.64 | |
cd02998 | 105 | PDI_a_ERp38 PDIa family, endoplasmic reticulum protein | 96.53 | |
cd02963 | 111 | TRX_DnaJ TRX domain, DnaJ domain containing protein fam | 96.47 | |
TIGR01126 | 107 | pdi_dom protein disulfide-isomerase domain; InterPro: I | 96.37 | |
cd02995 | 104 | PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') | 96.16 | |
COG0695 | 80 | GrxC Glutaredoxin and related proteins [Posttranslation | 94.93 | |
TIGR01068 | 101 | thioredoxin thioredoxin; InterPro: IPR005746 Thioredoxi | 93.71 | |
cd03004 | 104 | PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; | 93.61 | |
cd03003 | 101 | PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; | 93.48 | |
cd03005 | 102 | PDI_a_ERp46 PDIa family, endoplasmic reticulum protein | 93.37 | |
cd02999 | 100 | PDI_a_ERp44_like PDIa family, endoplasmic reticulum pro | 93.34 | |
cd03002 | 109 | PDI_a_MPD1_like PDI family, MPD1-like subfamily; compos | 93.0 | |
cd03026 | 89 | AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide red | 92.44 | |
TIGR02187 | 237 | GlrX_arch Glutaredoxin-like domain protein; InterPro: I | 92.4 | |
cd02984 | 97 | TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin | 92.32 | |
cd02948 | 102 | TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion p | 92.05 | |
TIGR03140 | 515 | AhpF alkyl hydroperoxide reductase, F subunit. This enz | 90.46 | |
cd02973 | 67 | TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like | 90.38 | |
cd02976 | 73 | NrdH NrdH-redoxin (NrdH) family; NrdH is a small monome | 90.32 | |
cd02969 | 171 | PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetic | 97.03 | |
PTZ00102 | 479 | disulphide isomerase; Provisional | 96.92 | |
PTZ00051 | 98 | thioredoxin; Provisional | 96.45 | |
cd03009 | 131 | TryX_like_TryX_NRX Tryparedoxin (TryX)-like family, Try | 95.99 | |
cd03012 | 126 | TlpA_like_DipZ_like TlpA-like family, DipZ-like subfami | 95.94 | |
cd02966 | 116 | TlpA_like_family TlpA-like family; composed of TlpA, Re | 95.85 | |
cd02964 | 132 | TryX_like_family Tryparedoxin (TryX)-like family; compo | 95.81 | |
TIGR01130 | 522 | ER_PDI_fam protein disulfide isomerases; InterPro: IPR0 | 95.72 | |
cd02993 | 109 | PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (AP | 95.57 | |
COG3118 | 304 | Thioredoxin domain-containing protein [Posttranslationa | 95.51 | |
PRK13728 | 181 | conjugal transfer protein TrbB; Provisional | 95.48 | |
TIGR01130 | 522 | ER_PDI_fam protein disulfide isomerases; InterPro: IPR0 | 95.1 | |
KOG1731 | 606 | consensus | 94.91 | |
cd03011 | 123 | TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for | 94.87 | |
cd02992 | 114 | PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QS | 94.85 | |
cd03008 | 146 | TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-de | 94.77 | |
cd03010 | 127 | TlpA_like_DsbE TlpA-like family, DsbE (also known as Cc | 93.84 | |
KOG0190 | 493 | consensus | 92.44 | |
cd02967 | 114 | mauD Methylamine utilization (mau) D family; mauD prote | 92.06 | |
TIGR02738 | 176 | TrbB type-F conjugative transfer system pilin assembly | 91.86 | |
cd02985 | 103 | TRX_CDSP32 TRX family, chloroplastic drought-induced st | 91.05 | |
TIGR00411 | 82 | redox_disulf_1 redox-active disulfide protein 1; InterP | 90.12 | |
PTZ00102 | 479 | disulphide isomerase; Provisional | 92.9 |
>cd03023 DsbA_Com1_like DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti | Back alignment and domain information |
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>cd03019 DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold | Back alignment and domain information |
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>PRK10954 periplasmic protein disulfide isomerase I; Provisional | Back alignment and domain information |
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>COG1651 DsbG Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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>pfam01323 DSBA DSBA-like thioredoxin domain | Back alignment and domain information |
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>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
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>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif | Back alignment and domain information |
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>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold | Back alignment and domain information |
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>PRK10877 thiol:disulfide interchange protein DsbC; Provisional | Back alignment and domain information |
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>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional | Back alignment and domain information |
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>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE | Back alignment and domain information |
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>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway | Back alignment and domain information |
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>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins | Back alignment and domain information |
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>COG3917 NahD 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
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>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates | Back alignment and domain information |
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>PRK03147 thiol-disulfide oxidoreductase; Provisional | Back alignment and domain information |
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>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain | Back alignment and domain information |
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>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus | Back alignment and domain information |
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>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains | Back alignment and domain information |
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>KOG0910 consensus | Back alignment and domain information |
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>KOG3160 consensus | Back alignment and domain information |
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>COG3531 Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation | Back alignment and domain information |
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>PRK10996 thioredoxin 2; Provisional | Back alignment and domain information |
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>PRK09381 trxA thioredoxin; Provisional | Back alignment and domain information |
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>pfam00085 Thioredoxin Thioredoxin | Back alignment and domain information |
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>COG2143 Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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>cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus | Back alignment and domain information |
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>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains | Back alignment and domain information |
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>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX | Back alignment and domain information |
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>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related) | Back alignment and domain information |
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>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD | Back alignment and domain information |
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>TIGR00411 redox_disulf_1 redox-active disulfide protein 1; InterPro: IPR004502 This group of proteins includes thioredoxins, glutaredoxins, protein-disulphide isomerases, and others, some of which have several such domains | Back alignment and domain information |
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>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention | Back alignment and domain information |
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>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants | Back alignment and domain information |
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>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain) | Back alignment and domain information |
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>cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5 | Back alignment and domain information |
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>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain | Back alignment and domain information |
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>TIGR01126 pdi_dom protein disulfide-isomerase domain; InterPro: IPR005788 This is a domain of eukaryotic protein disulphide isomerases, generally found in two copies | Back alignment and domain information |
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>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1 | Back alignment and domain information |
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>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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>TIGR01068 thioredoxin thioredoxin; InterPro: IPR005746 Thioredoxins , , , are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms | Back alignment and domain information |
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>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
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>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
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>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains | Back alignment and domain information |
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>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44 | Back alignment and domain information |
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>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein | Back alignment and domain information |
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>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides | Back alignment and domain information |
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>TIGR02187 GlrX_arch Glutaredoxin-like domain protein; InterPro: IPR011903 Glutaredoxins , , , also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors | Back alignment and domain information |
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>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes | Back alignment and domain information |
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>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein | Back alignment and domain information |
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>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit | Back alignment and domain information |
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>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO) | Back alignment and domain information |
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>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile | Back alignment and domain information |
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>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs | Back alignment and domain information |
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>PTZ00102 disulphide isomerase; Provisional | Back alignment and domain information |
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>PTZ00051 thioredoxin; Provisional | Back alignment and domain information |
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>cd03009 TryX_like_TryX_NRX Tryparedoxin (TryX)-like family, TryX and nucleoredoxin (NRX) subfamily; TryX and NRX are thioredoxin (TRX)-like protein disulfide oxidoreductases that alter the redox state of target proteins via the reversible oxidation of an active center CXXC motif | Back alignment and domain information |
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>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain | Back alignment and domain information |
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>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins | Back alignment and domain information |
---|
>cd02964 TryX_like_family Tryparedoxin (TryX)-like family; composed of TryX and related proteins including nucleoredoxin (NRX), rod-derived cone viability factor (RdCVF) and the nematode homolog described as a 16-kD class of TRX | Back alignment and domain information |
---|
>TIGR01130 ER_PDI_fam protein disulfide isomerases; InterPro: IPR005792 This family represents eukaryotic protein disulphide isomerases retained in the endoplasmic reticulum (ER) and other closely related forms | Back alignment and domain information |
---|
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases | Back alignment and domain information |
---|
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
---|
>PRK13728 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
---|
>TIGR01130 ER_PDI_fam protein disulfide isomerases; InterPro: IPR005792 This family represents eukaryotic protein disulphide isomerases retained in the endoplasmic reticulum (ER) and other closely related forms | Back alignment and domain information |
---|
>KOG1731 consensus | Back alignment and domain information |
---|
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif | Back alignment and domain information |
---|
>cd02992 PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QSOX) subfamily; QSOX is a eukaryotic protein containing an N-terminal redox active TRX domain, similar to that of PDI, and a small C-terminal flavin adenine dinucleotide (FAD)-binding domain homologous to the yeast ERV1p protein | Back alignment and domain information |
---|
>cd03008 TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-derived cone viability factor (RdCVF) subfamily; RdCVF is a thioredoxin (TRX)-like protein specifically expressed in photoreceptors | Back alignment and domain information |
---|
>cd03010 TlpA_like_DsbE TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif | Back alignment and domain information |
---|
>KOG0190 consensus | Back alignment and domain information |
---|
>cd02967 mauD Methylamine utilization (mau) D family; mauD protein is the translation product of the mauD gene found in methylotrophic bacteria, which are able to use methylamine as a sole carbon source and a nitrogen source | Back alignment and domain information |
---|
>TIGR02738 TrbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB; InterPro: IPR014109 This entry includes thiol-disulphide isomerase (TrbB), a protein that is involved in conjugative transfer of plasmid DNA, specifically in the F-type system | Back alignment and domain information |
---|
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif | Back alignment and domain information |
---|
>TIGR00411 redox_disulf_1 redox-active disulfide protein 1; InterPro: IPR004502 This group of proteins includes thioredoxins, glutaredoxins, protein-disulphide isomerases, and others, some of which have several such domains | Back alignment and domain information |
---|
>PTZ00102 disulphide isomerase; Provisional | Back alignment and domain information |
---|
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | ||
3eu3_A | 202 | Crystal Structure Of Bdbd From Bacillus Subtilis (R | 6e-20 | |
3f4r_A | 226 | Crystal Structure Of Wolbachia Pipientis Alpha-Dsba | 8e-15 | |
3f4s_A | 226 | Crystal Structure Of Wolbachia Pipientis Alpha-Dsba | 4e-14 | |
3gyk_A | 175 | The Crystal Structure Of A Thioredoxin-Like Oxidore | 6e-14 | |
3f4t_A | 226 | Crystal Structure Of Wolbachia Pipientis Alpha-Dsba | 2e-13 | |
3bd2_A | 186 | Crystal Structure Of Staphylococcus Aureus Dsba E96 | 2e-11 | |
3bci_A | 186 | Crystal Structure Of Staphylococcus Aureus Dsba Len | 2e-11 | |
3gmf_A | 205 | Crystal Structure Of Protein-Disulfide Isomerase Fr | 7e-11 | |
3bck_A | 186 | Crystal Structure Of Staphylococcus Aureus Dsba T15 | 1e-10 | |
3h93_A | 192 | Crystal Structure Of Pseudomonas Aeruginosa Dsba Le | 8e-09 | |
3dvw_A | 193 | Crystal Structure Of Reduced Dsba1 From Neisseria M | 2e-08 | |
3a3t_A | 210 | The Oxidoreductase Nmdsba1 From N. Meningitidis Len | 2e-08 | |
2rem_A | 193 | Crystal Structure Of Oxidoreductase Dsba From Xylel | 4e-08 | |
3hz8_A | 193 | Crystal Structure Of The Oxidized T176v Dsba1 Mutan | 8e-08 | |
1z6m_A | 175 | Structure Of Conserved Protein Of Unknown Function | 3e-07 | |
3hd5_A | 195 | Crystal Structure Of A Thiol:disulfide Interchange | 4e-07 | |
2ijy_A | 181 | Nmr Structure Ensemble For The Reduced Dsba Disulph | 1e-06 | |
1bed_A | 181 | Structure Of Disulfide Oxidoreductase Length = 181 | 1e-06 | |
3feu_A | 185 | Crystal Structure Of Dsba-Like Thioredoxin Domain V | 4e-06 | |
3l9u_A | 201 | Crystal Structure Of Salmonella Enterica Serovar Ty | 4e-05 | |
3l9v_A | 189 | Crystal Structure Of Salmonella Enterica Serovar Ty | 4e-05 | |
3dks_A | 189 | Dsba Substrate Complex Length = 189 | 5e-05 | |
1dsb_A | 189 | Crystal Structure Of The Dsba Protein Required For | 5e-05 | |
1fvj_A | 189 | The 2.06 Angstrom Structure Of The H32y Mutant Of T | 6e-05 | |
3l9s_A | 191 | Crystal Structure Of Salmonella Enterica Serovar Ty | 1e-04 | |
2znm_A | 195 | Oxidoreductase Nmdsba3 From Neisseria Meningitidis | 1e-04 | |
3c7m_A | 195 | Crystal Structure Of Reduced Dsbl Length = 195 | 1e-04 | |
3dvx_A | 196 | Crystal Structure Of Reduced Dsba3 From Neisseria M | 1e-04 | |
1ti1_A | 189 | Crystal Structure Of A Mutant Dsba Length = 189 | 2e-04 | |
1acv_A | 189 | Dsba Mutant H32s Length = 189 | 3e-04 | |
1ac1_A | 189 | Dsba Mutant H32l Length = 189 | 3e-04 | |
2b3s_A | 189 | Structure Of The Dsba Mutant (P31g-C33a) Length = 1 | 6e-04 | |
2b6m_A | 189 | Structure Of The Dsba Mutant (P31a-C33a) Length = 1 | 0.002 |
>gi|240104401|pdb|3EU3|A Chain A, Crystal Structure Of Bdbd From Bacillus Subtilis (Reduced) Length = 202 | Back alignment and structure |
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 1/188 (0%) Query: 41 VVDFRALLAASPSTMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGK 100 ++ PS +G+ DAPVT+VE+ C C F++ F ++ +I G Sbjct: 5 TEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGD 64 Query: 101 LRYILREFPLDSVSTVAVM-LARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNM 159 +++ + + K +W F LF KQ D L ++ Sbjct: 65 VKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDL 124 Query: 160 AKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGVFS 219 AK K + D+ ++ I +TP ++ + Sbjct: 125 AKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIK 184 Query: 220 KIIDSMIQ 227 + I+ ++ Sbjct: 185 ETIEKELK 192 |
>gi|225734104|pdb|3F4R|A Chain A, Crystal Structure Of Wolbachia Pipientis Alpha-Dsba1 Length = 226 | Back alignment and structure |
>gi|225734105|pdb|3F4S|A Chain A, Crystal Structure Of Wolbachia Pipientis Alpha-Dsba1 T172v Length = 226 | Back alignment and structure |
>gi|239782029|pdb|3GYK|A Chain A, The Crystal Structure Of A Thioredoxin-Like Oxidoreductase From Silicibacter Pomeroyi Dss-3 Length = 175 | Back alignment and structure |
>gi|225734106|pdb|3F4T|A Chain A, Crystal Structure Of Wolbachia Pipientis Alpha-Dsba1 C97aC146A Length = 226 | Back alignment and structure |
>gi|162330238|pdb|3BD2|A Chain A, Crystal Structure Of Staphylococcus Aureus Dsba E96q Length = 186 | Back alignment and structure |
>gi|162330236|pdb|3BCI|A Chain A, Crystal Structure Of Staphylococcus Aureus Dsba Length = 186 | Back alignment and structure |
>gi|225734328|pdb|3GMF|A Chain A, Crystal Structure Of Protein-Disulfide Isomerase From Novosphingobium Aromaticivorans Length = 205 | Back alignment and structure |
>gi|162330237|pdb|3BCK|A Chain A, Crystal Structure Of Staphylococcus Aureus Dsba T153v Length = 186 | Back alignment and structure |
>gi|270346535|pdb|3H93|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Dsba Length = 192 | Back alignment and structure |
>gi|255311760|pdb|3DVW|A Chain A, Crystal Structure Of Reduced Dsba1 From Neisseria Meningitidis Length = 193 | Back alignment and structure |
>gi|261824770|pdb|3A3T|A Chain A, The Oxidoreductase Nmdsba1 From N. Meningitidis Length = 210 | Back alignment and structure |
>gi|209156363|pdb|2REM|A Chain A, Crystal Structure Of Oxidoreductase Dsba From Xylella Fastidiosa Length = 193 | Back alignment and structure |
>gi|256599851|pdb|3HZ8|A Chain A, Crystal Structure Of The Oxidized T176v Dsba1 Mutant Length = 193 | Back alignment and structure |
>gi|66361337|pdb|1Z6M|A Chain A, Structure Of Conserved Protein Of Unknown Function From Enterococcus Faecalis V583 Length = 175 | Back alignment and structure |
>gi|237824100|pdb|3HD5|A Chain A, Crystal Structure Of A Thiol:disulfide Interchange Protein Dsba From Bordetella Parapertussis Length = 195 | Back alignment and structure |
>gi|152149114|pdb|2IJY|A Chain A, Nmr Structure Ensemble For The Reduced Dsba Disulphide Oxidoreductase From Vibrio Cholerae Length = 181 | Back alignment and structure |
>gi|157830252|pdb|1BED|A Chain A, Structure Of Disulfide Oxidoreductase Length = 181 | Back alignment and structure |
>gi|221046835|pdb|3FEU|A Chain A, Crystal Structure Of Dsba-Like Thioredoxin Domain Vf_a0457 From Vibrio Fischeri Length = 185 | Back alignment and structure |
>gi|290790202|pdb|3L9U|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Dsbl Length = 201 | Back alignment and structure |
>gi|290790203|pdb|3L9V|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Srga Length = 189 | Back alignment and structure |
>gi|237640481|pdb|3DKS|A Chain A, Dsba Substrate Complex Length = 189 | Back alignment and structure |
>gi|493982|pdb|1DSB|A Chain A, Crystal Structure Of The Dsba Protein Required For Disulphide Bond Formation In Vivo Length = 189 | Back alignment and structure |
>gi|2194076|pdb|1FVJ|A Chain A, The 2.06 Angstrom Structure Of The H32y Mutant Of The Disulfide Bond Formation Protein (Dsba) Length = 189 | Back alignment and structure |
>gi|290790201|pdb|3L9S|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Dsba Length = 191 | Back alignment and structure |
>gi|197107213|pdb|2ZNM|A Chain A, Oxidoreductase Nmdsba3 From Neisseria Meningitidis Length = 195 | Back alignment and structure |
>gi|194320016|pdb|3C7M|A Chain A, Crystal Structure Of Reduced Dsbl Length = 195 | Back alignment and structure |
>gi|255311761|pdb|3DVX|A Chain A, Crystal Structure Of Reduced Dsba3 From Neisseria Meningitidis Length = 196 | Back alignment and structure |
>gi|66360168|pdb|1TI1|A Chain A, Crystal Structure Of A Mutant Dsba Length = 189 | Back alignment and structure |
>gi|2624857|pdb|1ACV|A Chain A, Dsba Mutant H32s Length = 189 | Back alignment and structure |
>gi|2624855|pdb|1AC1|A Chain A, Dsba Mutant H32l Length = 189 | Back alignment and structure |
>gi|114793506|pdb|2B3S|A Chain A, Structure Of The Dsba Mutant (P31g-C33a) Length = 189 | Back alignment and structure |
>gi|118137311|pdb|2B6M|A Chain A, Structure Of The Dsba Mutant (P31a-C33a) Length = 189 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | ||
3gha_A | 202 | Disulfide bond formation protein D; BDBD, DSBA-like, TR | 6e-27 | |
3f4s_A | 226 | Alpha-DSBA1, putative uncharacterized protein; thioredo | 1e-24 | |
3bci_A | 186 | Disulfide bond protein A; thiol-disulfide oxidoreductas | 6e-24 | |
3h93_A | 192 | Thiol:disulfide interchange protein DSBA; disulfide bon | 2e-21 | |
1z6m_A | 175 | Conserved hypothetical protein; structural genomics, MC | 6e-21 | |
3gmf_A | 205 | Protein-disulfide isomerase; oxidoreductase, PSI-2, NYS | 9e-20 | |
3gyk_A | 175 | 27KDA outer membrane protein; APC61738.2, thioredoxin-l | 1e-19 | |
3gn3_A | 182 | Putative protein-disulfide isomerase; MCSG, PSI, struct | 2e-19 | |
2rem_A | 193 | Disulfide oxidoreductase; disulfide oxidoreductase, DSB | 1e-17 | |
3hd5_A | 195 | Thiol:disulfide interchange protein DSBA; protein struc | 4e-17 | |
3l9v_A | 189 | Putative thiol-disulfide isomerase or thioredoxin; thio | 2e-16 | |
3c7m_A | 195 | Thiol:disulfide interchange protein DSBA-like; redox pr | 4e-16 | |
3hz8_A | 193 | Thiol:disulfide interchange protein DSBA; thiol-oxidore | 5e-16 | |
3feu_A | 185 | Putative lipoprotein; alpha-beta structure, structural | 2e-15 | |
3l9s_A | 191 | Thiol:disulfide interchange protein DSBA; thioredoxin-f | 5e-15 | |
1bed_A | 181 | DSBA oxidoreductase; TCPG, protein disulfide isomerase, | 2e-14 | |
2znm_A | 195 | Thiol:disulfide interchange protein DSBA; thioredoxin f | 4e-14 | |
1acv_A | 189 | DSBA; disulfide oxidoreductase, thioredoxin fold, redox | 3e-13 | |
1v58_A | 241 | Thiol:disulfide interchange protein DSBG; reduced DSBG, | 1e-08 | |
1eej_A | 216 | Thiol:disulfide interchange protein; oxidoreductase, pr | 2e-08 | |
3gv1_A | 147 | Disulfide interchange protein; neisseria gonorrhoeae (s | 4e-05 | |
1un2_A | 197 | DSBA, thiol-disulfide interchange protein; disulfide ox | 4e-04 |
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A Length = 202 | Back alignment and structure |
---|
Score = 116 bits (290), Expect = 6e-27 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 3/182 (1%) Query: 48 LAASPSTMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILRE 107 ++ PS +G+ DAPVT+VE+ C C F++ F ++ +I G +++ Sbjct: 12 VSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVN 71 Query: 108 FPLD-SVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMA-KFAGF 165 S +A + + K +W F LF KQ D L ++A Sbjct: 72 VMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKI 131 Query: 166 SKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIIDSM 225 L+ + ++ + I +TP ++ + + I+ Sbjct: 132 KPETLKENLDKETFASQVEKDSDLN-QKMNIQATPTIYVNDKVIKNFADYDEIKETIEKE 190 Query: 226 IQ 227 ++ Sbjct: 191 LK 192 |
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis wmel} PDB: 3f4r_A* 3f4t_A* Length = 226 | Back alignment and structure |
---|
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A Length = 186 | Back alignment and structure |
---|
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, periplasm, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} Length = 192 | Back alignment and structure |
---|
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis V583} SCOP: c.47.1.13 Length = 175 | Back alignment and structure |
---|
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans DSM12444} Length = 205 | Back alignment and structure |
---|
>3gyk_A 27KDA outer membrane protein; APC61738.2, thioredoxin-like, oxidoreductase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Silicibacter pomeroyi dss-3} Length = 175 | Back alignment and structure |
---|
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural genomics, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 182 | Back alignment and structure |
---|
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa} Length = 193 | Back alignment and structure |
---|
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis} Length = 195 | Back alignment and structure |
---|
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, plasmid, oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} Length = 189 | Back alignment and structure |
---|
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} Length = 195 | Back alignment and structure |
---|
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A Length = 193 | Back alignment and structure |
---|
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio fischeri ES114} Length = 185 | Back alignment and structure |
---|
>3l9s_A Thiol:disulfide interchange protein DSBA; thioredoxin-fold, thiol-disulfide oxidoreductase, disulfide bond, periplasm; 1.58A {Salmonella enterica subsp} PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A Length = 191 | Back alignment and structure |
---|
>1bed_A DSBA oxidoreductase; TCPG, protein disulfide isomerase, disulfide oxidoreductase; 2.00A {Vibrio cholerae} SCOP: c.47.1.13 PDB: 2ijy_A Length = 181 | Back alignment and structure |
---|
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A Length = 195 | Back alignment and structure |
---|
>1acv_A DSBA; disulfide oxidoreductase, thioredoxin fold, redox-active center; 1.90A {Escherichia coli} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 1ac1_A 1fvj_A 3dks_A 1bq7_A 1u3a_A* 1ti1_A* 2hi7_A* 2zup_A* 3e9j_B* 2b6m_A 2b3s_A Length = 189 | Back alignment and structure |
---|
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A Length = 241 | Back alignment and structure |
---|
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A Length = 216 | Back alignment and structure |
---|
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090} Length = 147 | Back alignment and structure |
---|
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13 Length = 197 | Back alignment and structure |
---|
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 232 | DSBA oxidoreductase [Candidatus Liberibacter asiaticus | ||
3f4s_A | 226 | Alpha-DSBA1, putative uncharacterized protein; thioredo | 100.0 | |
3gha_A | 202 | Disulfide bond formation protein D; BDBD, DSBA-like, TR | 100.0 | |
3bci_A | 186 | Disulfide bond protein A; thiol-disulfide oxidoreductas | 99.97 | |
3gmf_A | 205 | Protein-disulfide isomerase; oxidoreductase, PSI-2, NYS | 99.97 | |
3hd5_A | 195 | Thiol:disulfide interchange protein DSBA; protein struc | 99.97 | |
3h93_A | 192 | Thiol:disulfide interchange protein DSBA; disulfide bon | 99.96 | |
3gyk_A | 175 | 27KDA outer membrane protein; APC61738.2, thioredoxin-l | 99.96 | |
2rem_A | 193 | Disulfide oxidoreductase; disulfide oxidoreductase, DSB | 99.96 | |
3hz8_A | 193 | Thiol:disulfide interchange protein DSBA; thiol-oxidore | 99.96 | |
2znm_A | 195 | Thiol:disulfide interchange protein DSBA; thioredoxin f | 99.95 | |
1z6m_A | 175 | Conserved hypothetical protein; structural genomics, MC | 99.94 | |
1bed_A | 181 | DSBA oxidoreductase; TCPG, protein disulfide isomerase, | 99.94 | |
3c7m_A | 195 | Thiol:disulfide interchange protein DSBA-like; redox pr | 99.94 | |
3feu_A | 185 | Putative lipoprotein; alpha-beta structure, structural | 99.93 | |
3l9v_A | 189 | Putative thiol-disulfide isomerase or thioredoxin; thio | 99.93 | |
3l9s_A | 191 | Thiol:disulfide interchange protein DSBA; thioredoxin-f | 99.92 | |
3gn3_A | 182 | Putative protein-disulfide isomerase; MCSG, PSI, struct | 99.9 | |
1v58_A | 241 | Thiol:disulfide interchange protein DSBG; reduced DSBG, | 99.81 | |
1eej_A | 216 | Thiol:disulfide interchange protein; oxidoreductase, pr | 99.8 | |
2in3_A | 216 | Hypothetical protein; DSBA family, FRNE-like subfamily, | 99.77 | |
1t3b_A | 211 | Thiol:disulfide interchange protein DSBC; oxidoreductas | 99.76 | |
3gl5_A | 239 | Putative DSBA oxidoreductase SCO1869; probable DSBA oxi | 99.75 | |
3kzq_A | 208 | Putative uncharacterized protein VP2116; protein with u | 99.75 | |
3gv1_A | 147 | Disulfide interchange protein; neisseria gonorrhoeae (s | 99.74 | |
2imf_A | 203 | HCCA isomerase, 2-hydroxychromene-2-carboxylate isomera | 99.57 | |
3fz5_A | 202 | Possible 2-hydroxychromene-2-carboxylate isomerase; str | 99.51 | |
1r4w_A | 226 | Glutathione S-transferase, mitochondrial; glutathione t | 99.37 | |
1yzx_A | 226 | Glutathione S-transferase kappa 1; glutathione sulfinat | 99.37 | |
3dml_A | 116 | Putative uncharacterized protein; thioredoxin, oxidored | 98.62 | |
2hyx_A | 352 | Protein DIPZ; thioredoxin fold, jelly-roll, structural | 98.33 | |
1fo5_A | 85 | Thioredoxin; disulfide oxidoreductase, structural genom | 98.21 | |
1v98_A | 140 | Thioredoxin; oxidoreductase, structural genomics, riken | 98.04 | |
2b5x_A | 148 | YKUV protein, TRXY; thioredoxin-like, oxidoreductase; N | 98.03 | |
2ppt_A | 155 | Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; | 97.95 | |
1nsw_A | 105 | Thioredoxin, TRX; thermostability, electron transport; | 97.83 | |
3or5_A | 165 | Thiol:disulfide interchange protein, thioredoxin protei | 97.68 | |
3gl3_A | 152 | Putative thiol:disulfide interchange protein DSBE; oxid | 97.53 | |
3fkf_A | 148 | Thiol-disulfide oxidoreductase; structural genomics, PS | 97.47 | |
3lwa_A | 183 | Secreted thiol-disulfide isomerase; thioredoxin, PSI, M | 97.45 | |
3kcm_A | 154 | Thioredoxin family protein; SGX, thioredoxin protein, P | 97.33 | |
2h30_A | 164 | Thioredoxin, peptide methionine sulfoxide reductase MSR | 97.31 | |
2f9s_A | 151 | Thiol-disulfide oxidoreductase RESA; thioredoxin-like p | 97.21 | |
2vup_A | 190 | Glutathione peroxidase-like protein; oxidoreductase, tr | 97.17 | |
3dwv_A | 187 | Glutathione peroxidase-like protein; alpha beta, 3-laye | 97.03 | |
1hyu_A | 521 | AHPF, alkyl hydroperoxide reductase subunit F; thiol-th | 96.39 | |
1un2_A | 197 | DSBA, thiol-disulfide interchange protein; disulfide ox | 99.1 | |
1un2_A | 197 | DSBA, thiol-disulfide interchange protein; disulfide ox | 99.07 | |
1nho_A | 85 | Probable thioredoxin; beta sheet, alpha helix, oxidored | 98.3 | |
3kp9_A | 291 | Vkorc1/thioredoxin domain protein; warfarin, disulfide | 98.19 | |
3hz4_A | 140 | Thioredoxin; NYSGXRC, PSI-II, reduced form, protein str | 98.17 | |
2e0q_A | 104 | Thioredoxin; electron transport; 1.49A {Sulfolobus toko | 98.09 | |
2hls_A | 243 | Protein disulfide oxidoreductase; thioredoxin fold; 1.9 | 98.06 | |
3p2a_A | 148 | Thioredoxin 2, putative thioredoxin-like protein; struc | 98.06 | |
2trx_A | 108 | Thioredoxin; electron transport; 1.68A {Escherichia col | 98.05 | |
3gnj_A | 111 | Thioredoxin domain protein; APC92103, structural genomi | 98.04 | |
3hxs_A | 141 | Thioredoxin, TRXP; electron transport; 2.00A {Bacteroid | 98.03 | |
2l57_A | 126 | Uncharacterized protein; structural genomics, unknown f | 98.0 | |
1w4v_A | 119 | Thioredoxin, mitochondrial; antioxidant enzyme, mitocho | 97.96 | |
3emx_A | 135 | Thioredoxin; structural genomics, oxidoreductase, PSI-2 | 97.94 | |
3die_A | 106 | Thioredoxin, TRX; electron transport, SWAP domain, redo | 97.9 | |
2o8v_B | 128 | Thioredoxin 1; disulfide crosslinked complex, oxidoredu | 97.9 | |
1t00_A | 112 | Thioredoxin, TRX; structure, redox regulation, multifun | 97.87 | |
3dxb_A | 222 | Thioredoxin N-terminally fused to PUF60(UHM); splicing, | 97.86 | |
2ywm_A | 229 | Glutaredoxin-like protein; redox protein, structural ge | 97.85 | |
1zma_A | 118 | Bacterocin transport accessory protein; alpha-beta-alph | 97.84 | |
3lor_A | 160 | Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, | 97.84 | |
1kng_A | 156 | Thiol:disulfide interchange protein CYCY; thioredoxin f | 97.83 | |
2yzu_A | 109 | Thioredoxin; redox protein, electron transport, structu | 97.83 | |
2i4a_A | 107 | Thioredoxin; acidophIle, disulfide exchange, oxidoreduc | 97.82 | |
2dj1_A | 140 | Protein disulfide-isomerase A4; protein ERP-72, ERP72, | 97.82 | |
2voc_A | 112 | Thioredoxin; electron transport, homodimer, disulfide, | 97.81 | |
1fb6_A | 105 | Thioredoxin M; electron transport; 2.10A {Spinacia oler | 97.81 | |
2qgv_A | 140 | Hydrogenase-1 operon protein HYAE; alpha-beta protein, | 97.8 | |
1gh2_A | 107 | Thioredoxin-like protein; redox-active center, electron | 97.76 | |
1dby_A | 107 | Chloroplast thioredoxin M CH2; thioredoxin CH2, chlorop | 97.75 | |
2es7_A | 142 | Q8ZP25_salty, putative thiol-disulfide isomerase and th | 97.75 | |
1thx_A | 115 | Thioredoxin, thioredoxin 2; oxido-reductase, electron t | 97.74 | |
2kuc_A | 130 | Putative disulphide-isomerase; structural genomics, thi | 97.71 | |
3d6i_A | 112 | Monothiol glutaredoxin-3; thioredoxin-like, electron tr | 97.66 | |
2diz_A | 117 | Thioredoxin domain-containing protein 5; thioredoxin-li | 97.66 | |
2fwh_A | 134 | Thiol:disulfide interchange protein DSBD; thioredoxin-l | 97.66 | |
1zzo_A | 136 | RV1677; thioredoxin fold, structural genomics, PSI, pro | 97.64 | |
1r26_A | 125 | Thioredoxin; redox-active disulfide, electron transport | 97.62 | |
2i1u_A | 121 | Thioredoxin, TRX, MPT46; redox protein, electron transp | 97.6 | |
2vm1_A | 118 | Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, | 97.57 | |
2wz9_A | 153 | Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} P | 97.56 | |
1x5d_A | 133 | Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, th | 97.55 | |
1ep7_A | 112 | Thioredoxin CH1, H-type; electron transport; 2.10A {Chl | 97.54 | |
1xfl_A | 124 | Thioredoxin H1; AT3G51030, structural genomics, protein | 97.5 | |
2j23_A | 121 | Thioredoxin; immune protein, autoreactivity, cross-reac | 97.5 | |
3d22_A | 139 | TRXH4, thioredoxin H-type; electron transport, cytoplas | 97.5 | |
2ju5_A | 154 | Thioredoxin disulfide isomerase; protein, oxidoreductas | 97.48 | |
3fw2_A | 150 | Thiol-disulfide oxidoreductase; structural genomics, AP | 97.47 | |
3m9j_A | 105 | Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} PDB: | 97.45 | |
2b1k_A | 168 | Thiol:disulfide interchange protein DSBE; C-terminal th | 97.45 | |
3eyt_A | 158 | Uncharacterized protein SPOA0173; thioredoxin-like supe | 97.41 | |
2dml_A | 130 | Protein disulfide-isomerase A6; thioredoxin domain-cont | 97.41 | |
2qsi_A | 137 | Putative hydrogenase expression/formation protein HUPG; | 97.4 | |
2vim_A | 104 | Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.3 | 97.4 | |
1a8l_A | 226 | Protein disulfide oxidoreductase; PDI, thioredoxin fold | 97.37 | |
1x5e_A | 126 | Thioredoxin domain containing protein 1; TMX, TXNDC1, s | 97.3 | |
1faa_A | 124 | Thioredoxin F; electron transport; 1.85A {Spinacia oler | 97.3 | |
1ti3_A | 113 | Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tr | 97.29 | |
2vlu_A | 122 | Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, | 97.23 | |
1mek_A | 120 | Protein disulfide isomerase; electron transport, redox- | 97.18 | |
2pu9_C | 111 | TRX-F, thioredoxin F-type, chloroplast; protein-protein | 97.15 | |
1syr_A | 112 | Thioredoxin; SGPP, structural genomics, PSI, protein st | 97.15 | |
3f9u_A | 172 | Putative exported cytochrome C biogenesis- related prot | 97.12 | |
3f3q_A | 109 | Thioredoxin-1; His TAG, electron transport, cytoplasm, | 97.05 | |
2xc2_A | 117 | Thioredoxinn; oxidoreductase, protein disulfide reducta | 96.98 | |
2oe3_A | 114 | Thioredoxin-3; electron transport, alpha/beta sandwich, | 96.97 | |
3idv_A | 241 | Protein disulfide-isomerase A4; thioredoxin-like fold, | 96.95 | |
3ia1_A | 154 | THIO-disulfide isomerase/thioredoxin; oxidoreductase, P | 96.9 | |
1x5c_A | 121 | Protein disulfide-isomerase; DSI, ERBA2L, GIT, PDI, PDI | 96.86 | |
3ewl_A | 142 | Uncharacterized conserved protein BF1870; alpha-beta fo | 96.78 | |
1lu4_A | 136 | Soluble secreted antigen MPT53; thioredoxin-like fold, | 96.76 | |
3kp8_A | 106 | Vkorc1/thioredoxin domain protein; blood coagulation, d | 96.71 | |
2dj3_A | 133 | Protein disulfide-isomerase A4; protein ERP-72, ERP72, | 96.7 | |
1wmj_A | 130 | Thioredoxin H-type; structural genomics, program for RI | 96.44 | |
3cmi_A | 171 | Peroxiredoxin HYR1; thioredoxin-like fold, cytoplasm, o | 96.32 | |
3c1r_A | 118 | Glutaredoxin-1; oxidized form, oxidoreductase, cytoplas | 96.24 | |
3cxg_A | 133 | Putative thioredoxin; malaria, structural genomics, oxi | 96.22 | |
2rli_A | 171 | SCO2 protein homolog, mitochondrial; copper protein, th | 96.02 | |
3l4n_A | 127 | Monothiol glutaredoxin-6; C-terminal domain of GRX6, ox | 95.98 | |
2dlx_A | 153 | UBX domain-containing protein 7; UAS domain, protein KI | 95.29 | |
1oaz_A | 123 | Thioredoxin 1; immune system, antibody/complex, antibod | 94.97 | |
1ego_A | 85 | Glutaredoxin; electron transport; NMR {Escherichia coli | 94.88 | |
3ic4_A | 92 | Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, p | 92.83 | |
3msz_A | 89 | Glutaredoxin 1; alpha-beta sandwich, center for structu | 92.48 | |
2djj_A | 121 | PDI, protein disulfide-isomerase; thioredoxin fold; NMR | 92.45 | |
1ilo_A | 77 | Conserved hypothetical protein MTH895; beta-alpha-beta- | 92.19 | |
2ggt_A | 164 | SCO1 protein homolog, mitochondrial; copper chaperone, | 91.96 | |
3h79_A | 127 | Thioredoxin-like protein; thioredoxin fold, catalytic c | 91.24 | |
3nzn_A | 103 | Glutaredoxin; structural genomics, PSI2, MCSG, protein | 91.15 | |
1wjk_A | 100 | C330018D20RIK protein; glutaredoxin, thioredoxin fold, | 91.0 | |
2e7p_A | 116 | Glutaredoxin; thioredoxin fold, poplar, electron transp | 90.53 | |
3erw_A | 145 | Sporulation thiol-disulfide oxidoreductase A; thioredox | 97.55 | |
2r2j_A | 382 | Thioredoxin domain-containing protein 4; CRFS motif, ch | 97.55 | |
1xwb_A | 106 | Thioredoxin; dimerization, redox regulation, X-RAY elec | 97.53 | |
1jfu_A | 186 | Thiol:disulfide interchange protein TLPA; thioredoxin-l | 97.44 | |
3ed3_A | 298 | Protein disulfide-isomerase MPD1; thioredoxin-like doma | 97.25 | |
3f8u_A | 481 | Protein disulfide-isomerase A3ERP57; alternative splici | 97.24 | |
3hcz_A | 148 | Possible thiol-disulfide isomerase; APC61559.2, structu | 97.19 | |
3kh7_A | 176 | Thiol:disulfide interchange protein DSBE; TRX-like, thi | 97.14 | |
2cvb_A | 188 | Probable thiol-disulfide isomerase/thioredoxin; redox p | 97.03 | |
3ha9_A | 165 | Uncharacterized thioredoxin-like protein; PSI, MCSG, st | 97.02 | |
1wou_A | 123 | Thioredoxin -related protein, 14 kDa; electron transpor | 96.98 | |
3hdc_A | 158 | Thioredoxin family protein; ATCC53774, DSM 7210, , stru | 96.92 | |
2ywi_A | 196 | Hypothetical conserved protein; uncharacterized conserv | 96.92 | |
3idv_A | 241 | Protein disulfide-isomerase A4; thioredoxin-like fold, | 96.9 | |
2f51_A | 118 | Thioredoxin; electron transport; 1.90A {Trichomonas vag | 96.48 | |
3eur_A | 142 | Uncharacterized protein; PSI2,MCSG, conserved protein, | 96.39 | |
3cyn_A | 189 | Probable glutathione peroxidase 8; thioredoxin fold, me | 96.32 | |
1o73_A | 144 | Tryparedoxin; electron transport, trypanosomatid, thior | 96.31 | |
2v1m_A | 169 | Glutathione peroxidase; selenium, selenocysteine, oxido | 95.9 | |
2p5q_A | 170 | Glutathione peroxidase 5; thioredoxin fold, oxidoreduct | 95.88 | |
2p31_A | 181 | CL683, glutathione peroxidase 7; thioredoxin fold, NPGP | 95.19 | |
3fk8_A | 133 | Disulphide isomerase; APC61824.1, structural genomics, | 95.06 | |
1a8l_A | 226 | Protein disulfide oxidoreductase; PDI, thioredoxin fold | 93.92 | |
2b5e_A | 504 | Protein disulfide-isomerase; 2.40A {Saccharomyces cerev | 92.83 | |
1qgv_A | 142 | Spliceosomal protein U5-15KD; snRNP, thioredoxin, trans | 92.08 | |
2hls_A | 243 | Protein disulfide oxidoreductase; thioredoxin fold; 1.9 | 90.9 | |
3me7_A | 170 | Putative uncharacterized protein; electron transfer pro | 90.69 | |
3evi_A | 118 | Phosducin-like protein 2; alpha beta, 3-layer(ABA) sand | 90.03 |
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis wmel} PDB: 3f4r_A* 3f4t_A* | Back alignment and structure |
---|
Probab=100.00 E-value=9.1e-34 Score=232.05 Aligned_cols=175 Identities=33% Similarity=0.608 Sum_probs=151.9 Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 66784116898888999970588820644334211344320000203799843323430245777666666665321245 Q gi|254780477|r 54 TMKDVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYW 133 (232) Q Consensus 54 ~~~~~~~G~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 133 (232) ..+++++||+||||+|+||+||.||||+.|++++.+.+++.+.+.+++.+++++++.+.....++..+ .+...++++| T Consensus 28 ~~~~~~~Gn~dA~i~Ivef~Dy~Cp~C~~f~~~v~~~l~~~~~~~~~~~~~~~~~p~~~~s~~aa~~a--~~a~~~~k~~ 105 (226) T 3f4s_A 28 LPNDKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLS--HCYEKQEDYF 105 (226) T ss_dssp CTTCCEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHG--GGCCSHHHHH T ss_pred CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH--HHHHCCCCHH T ss_conf 99998367999998999988999873798999999999998502652899846887646699999999--9874014258 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC------ Q ss_conf 58888886543321134-56899876431100006889864059899999999999999861885365799898------ Q gi|254780477|r 134 GFVSLLFNKQDDWINSK-NYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFIGG------ 206 (232) Q Consensus 134 ~~~~~~~~~q~~~~~~~-~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~VnG------ 206 (232) .+++.+|..|..+.... ...+.+..++...|++..++.+|+++....+.+.++...+.+++||+||||||||| T Consensus 106 ~~~~~Lf~~q~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~gI~gTPtfiIng~~~~~~ 185 (226) T 3f4s_A 106 NFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSY 185 (226) T ss_dssp HHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCC T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC T ss_conf 99999998566430234530578999988700569999999769999999999999999983986589899937775454 Q ss_pred -----EEECCCCCHHHHHHHHHHHHHHHH Q ss_conf -----996189999999999999999860 Q gi|254780477|r 207 -----NLYLGDMSEGVFSKIIDSMIQDST 230 (232) Q Consensus 207 -----~~~~g~~~~~~~~~~id~ll~~~~ 230 (232) ..+.|+.++++|+++||++|.|+- T Consensus 186 ~~~n~~~~~G~~~~e~~~~~Id~ll~ka~ 214 (226) T 3f4s_A 186 IEHNKVKHGGYKELKYFTNVIDKLYGKAI 214 (226) T ss_dssp CCGGGGEEESCCCHHHHHHHHHHHHHHHH T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHH T ss_conf 56687672288899999999999999867 |
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A | Back alignment and structure |
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>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A | Back alignment and structure |
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>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
---|
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis} | Back alignment and structure |
---|
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, periplasm, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
---|
>3gyk_A 27KDA outer membrane protein; APC61738.2, thioredoxin-like, oxidoreductase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Silicibacter pomeroyi dss-3} | Back alignment and structure |
---|
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa} | Back alignment and structure |
---|
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A | Back alignment and structure |
---|
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A | Back alignment and structure |
---|
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis V583} SCOP: c.47.1.13 | Back alignment and structure |
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>1bed_A DSBA oxidoreductase; TCPG, protein disulfide isomerase, disulfide oxidoreductase; 2.00A {Vibrio cholerae} SCOP: c.47.1.13 PDB: 2ijy_A | Back alignment and structure |
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>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A | Back alignment and structure |
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>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio fischeri ES114} | Back alignment and structure |
---|
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, plasmid, oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} | Back alignment and structure |
---|
>3l9s_A Thiol:disulfide interchange protein DSBA; thioredoxin-fold, thiol-disulfide oxidoreductase, disulfide bond, periplasm; 1.58A {Salmonella enterica subsp} PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A | Back alignment and structure |
---|
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural genomics, protein structure initiative; 2.50A {Pseudomonas syringae PV} | Back alignment and structure |
---|
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A | Back alignment and structure |
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>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A | Back alignment and structure |
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>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, structural genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea} | Back alignment and structure |
---|
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1 | Back alignment and structure |
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>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase SCO1869, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3} | Back alignment and structure |
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>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus} | Back alignment and structure |
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>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090} | Back alignment and structure |
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>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A* | Back alignment and structure |
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>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomerase; structural genomics, PSI-2, protein structure initiative; HET: MSE GTT PGE; 2.40A {Rhodobacter sphaeroides 2} | Back alignment and structure |
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>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13 | Back alignment and structure |
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>1yzx_A Glutathione S-transferase kappa 1; glutathione sulfinate, peroxidase; HET: GSF; 1.93A {Homo sapiens} | Back alignment and structure |
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>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A* | Back alignment and structure |
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>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB structural genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis H37RV} | Back alignment and structure |
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>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1 | Back alignment and structure |
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