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ECOD


Homologous cluster 'P-loop domains-related' representative domains

Cluster description:

P-loop domains-related homologous cluster includes domains with following signature motifs: phosphate binding Walker A or P-loop motif (G-x(4)-GK-[TS]), Walker B, essential for ATP hydrolysis (G-x(3)-LhhhD[E]) (Neuwald et al., Genome Res., 1999; PMID: 9927482), DEAD/DEAH motif in helicases (Aubourg et al., Nucleic Acids Res., 1999; PMID: 9862990), beta-CASP domains (PMID: 17128255), as well as domains whose signature motifs were degraded, but they have high structure similarity with other P-loop domains

ECOD repr domain ID Domain range ECOD T-group ECOD F-group ID Protein name Homology sign logo Pfam seed alignment depth Pfam Comments
e1z3iX2 X:92-389 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.154 nucleosome-remodeling Rad54 GxGKT; DEAH 19 PF00176
e1z3iX1 X:390-735 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1429 nucleosome-remodeling Rad54 n/a 421 PF00271 observed as duplication, next to of different Walker A containing domains (PF00176, 2004.1.1.154; PF00270, 2004.1.1.73)
e2zpaB5 B:160-326 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.107 tRNA(Met) Cytidine Acetyltransferase GxGK; LhhhDE 100 PF05127
e3qq5A2 A:173-275 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.243 [FeFe]-hydrogenase maturation protein HydF n/a 10 PF18128 duplication, next to another Walker A containing domain
e3qq5A3 A:276-398 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.244 [FeFe]-hydrogenase maturation protein HydF n/a 23 PF18133 duplication, next to another Walker A containing domain
e1bifA1 A:37-249 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.3 6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase GxxxxGKT 11 PF01591
e2fnaA4 A:1-206 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.225 aaa+ atpase GxxGxGKT; hhhhDE 29 PF01637
e4mrnA2 A:343-607 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1405 ABC TRANSPORTER RELATED PROTEIN GxxGxGKS; LhhhDE 55 PF00005
e5dgkA1 A:157-438 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1430 Active helicase GxxxxGKT 23 PF06048
e2ze5A1 A:1-227 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.112 adenosine phosphate-isopentenyltransferase GxxxxGKT 7 PF01745
e1d6jA2 A:8-143,A:170-210 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.209 ADENOSINE-5'PHOSPHOSULFATE KINASE GxxGxGKS 18 PF01583
e1c9kA1 A:1-180 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.65 ADENOSYLCOBINAMIDE KINASE GxxxxGKS 129 PF02283
e3gmtA1 A:1-204 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1260 adenylate kinase GxxGxGKGT 21 PF00406
e1e4yA2 A:1-121,A:157-214 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1276 Adenylate kinase GxxGxGKGT 21 PF00406
e3tlxB1 B:3-242 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1254 Adenylate kinase 2 GxxGxGKGT 21 PF00406
e1qf5A1 A:1-431 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.44 adenylosuccinate synthetase GxxxGxxGK 755 PF00709
e1m7gA1 A:2-209 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.48 ADENYLYLSULFATE KINASE GxxGxGK 18 PF01583
e4a4zA2 A:506-541,A:607-800 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.490 ANTIVIRAL HELICASE SKI2 n/a 421 PF00271 duplication, next to another Walker A containing domain
e2a5yB5 B:109-291 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.233 Apoptosis regulator ced-4 GxxGxGKT; LhhhDD 9 PF00931
e4idnB1 B:31-344 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1421 atlastin-1 GxxxxGKS; LhhhD 12 PF02263
e3u44B1 B:2-308 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.181 ATP-dependent helicase/deoxyribonuclease subunit B GxGKT; DEAD 36 PF00580
e5eanA4 A:570-857 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.585 ATP-dependent helicase/nuclease GxxGxGKT; hhhhDE 45 PF13086
e1t5iA1 A:261-428 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.978 ATP-DEPENDENT RNA HELICASE n/a 421 PF00271 observed as duplication, next to of different Walker A containing domains (PF00176, 2004.1.1.154; PF00270, 2004.1.1.73)
e3v46A1 A:234-393 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.60 CELL DIVISION CONTROL PROTEIN 73 n/a 145 PF05179 Dali Z-score=9.6 and TM-score=0.63 with PF00071 (2004.1.1.144, e2g77B1), similar topology
e2qy9A2 A:285-495 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.156 Cell division protein ftsY GxxGxGKT 49 PF00448
e2bmjA1 A:66-240 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.122 Centaurin Gamma 1 GxxxxGKT; LhhhD 60 PF00071
e4p0tB1 B:15-170 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.61 Centromere protein M n/a 16 PF11111 98 HHS prob with e2bmjA1 Centaurin Gamma 1 (2004.1.1.122, PF00071, contains Walker A and B)
e1qhxA1 A:1-178 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.67 chloramphenicol phosphotransferase GxxxxGKS 7 PF07931
e3eujA1 A:32-1496 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1412 Chromosome partition protein mukB GxxGxGK 9 PF04310
e4dt1A1 A:1-213 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.478 Chromosome segregation in meiosis protein 2 n/a 13 PF16834 Dali Z-score=13.6 and TM-score=0.67 with PF00154 (2004.1.1.237, e4d6pA1), similar topology
e1sxjA3 A:295-478 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.190 clamp loader activator 1 95 kDa subunit GxxGxGKT; hhhhDE 207 PF00004
e1g5tA1 A:27-183 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.64 COB(I)ALAMIN ADENOSYLTRANSFERASE GxGKGKT; LhhhDE 487 PF02572
e1e9rA1 A:74-506 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.169 conjugative coupling protein TrwBdeltaN70 GxxGxGKT 15 PF10412
e4qqxA3 A:547-818 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.979 CRISPR-associated helicase n/a 421 PF00271 duplication, next to another Walker A containing domain
e3qhqA1 A:1-222 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.58 CRISPR-associated protein Csn2 n/a 11 PF09711 Dali Z-score=9.6 with PF00005 (2004.1.1.1404, e6hs3B1), similar topology
e3zthA1 A:1-347 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.476 Csn2 Protein n/a 3 PF16813 Dali Z-score=11.0 with PF00005 (2004.1.1.1404, e2vf7C5), similar topology
e1vcoA1 A:11-282 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.68 CTP SYNTHETASE GGxxxGxGK 471 PF06418
e2zpaB6 B:1-159 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.82 Cytidine Acetyltransferase n/a 32 PF08351 duplication, next to another Walker A containing domain
e1q3tA1 A:14-236 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1406 Cytidylate kinase GxxGxGKS 12 PF02224
e3w90A1 A:3-207 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1409 Cytidylate kinase GxxGxGKS 12 PF02224
e4dieC2 C:-1-218 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1417 Cytidylate kinase GxxGxGKS 12 PF02224
e2h92A1 A:3-218 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.69 CYTIDYLATE KINASE GxxGxGKS 12 PF02224
e2jasA1 A:1-200 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.80 DEOXYGUANOSINE KINASE GxxGxGKS 13 PF01712
e1dekA1 A:1-241 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.184 deoxynucleotide kinase GxxxxGK 47 PF04275
e1zmxF1 F:12-208 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1418 deoxyribonucleoside kinase GxxGxGKS 13 PF01712
e1uf9A1 A:6-196 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.63 Dephosphocoenzyme A kinase GxxGxGKS 11 PF01121
e1byiA1 A:1-224 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.25 dethiobiotin synthetase GGxGKT 79 PF01656
e4a1fA1 A:151-473 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.76 DNA HELICASE GxxxxGKT; LhhhD 549 PF03796
e4bilC4 C:1-278 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.473 DNA MATURASE B GxGK; hhhhDD 1 n/a
e1wb9A3 A:567-800 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.128 DNA Mismatch Repair enzyme MutS GxxxxGK; LhhhDE 30 PF00488
e1c4oA1 A:2-157,A:236-409 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.185 DNA nucleotide excision repair enzyme UvrB GxGKT; DEAH 52 PF04851
e5hd9A1 A:4-197 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.651 DNA packaging ATPase GxxGxGK 4 PF05894
e1em8A1 A:1-147 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1019 DNA polymerase III Chi subunit n/a 253 PF04364 Dali Z-score=13.1 and TM-score=0.78 with PF00271 (2004.1.1.978, e5iy7V2), similar topology
e1a5tA5 A:1-165 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1360 DNA polymerase III delta' subunit GxxGxGK 44 PF13177
e1xxhF3 F:1-142 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.227 DNA polymerase III, delta subunit n/a 21 PF06144 98.2 HHS prob with e1a5tA5 DNA polymerase III delta' subunit (2004.1.1.1360, contains Walker A)
e1cr2A1 A:271-467,A:489-547 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.24 DNA PRIMASE/HELICASE GxxGxGKT; LhhhD 540 PF03796
e4ad8A1 A:32-168,A:387-563 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.21 DNA REPAIR PROTEIN RECN GxxGxGKS; DEAD 28 PF02463
e1u0jA1 A:224-490 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1413 DNA replication protein GxxxxGK 24 PF01057
e2iusA2 A:945-1248 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1411 DNA translocase FtsK GxxGxGKS 16 PF01580
e2kjqA1 A:12-149 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.226 DnaA-related protein NMB1076 GxxGxGKT; LhhhDD 10 PF00308
e4h1uA1 A:1-327 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1410 Dynamin-1-like protein GxxGxGKTS 65 PF00350
e4w7gA1 A:44-345,A:375-394 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.75 Dynein Light Intermediate Chain GxxxxGKT 6 PF05783
e4a8jA2 A:67-165,A:245-416 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.137 ELONGATOR COMPLEX PROTEIN 4 degraded motif 71 PF05625
e4ejsB1 B:7-234 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.89 Elongator complex protein 5 LhhhD 90 PF10483
e4a8jC2 C:5-273 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.347 ELONGATOR COMPLEX PROTEIN 6 LhhhDD 17 PF09807
e1gvnB1 B:2-274 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.177 epsilon(2)zeta(2) protein complex GxxGxGKT 18 PF06414
e1w36D4 D:110-360 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.28 EXODEOXYRIBONUCLEASE V ALPHA CHAIN GxxGxGKT; LhhhDE 119 PF13604
e1w36C1 C:1-347 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.507 EXODEOXYRIBONUCLEASE V GAMMA CHAIN n/a 59 PF04257 Dali Z-score=24.5 with PF00580 (2004.1.1.181, e4ceiB6 contains Walker A and DEAD), similar topology
e2gc6A1 A:1-296 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1465 folylpolyglutamate synthetase GxxGKTS 56 PF08245
e3do6A1 A:0-542 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.977 Formate-tetrahydrofolate ligase GxGKTT 477 PF01268
e4kfrB1 B:1-208 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.20 Genome packaging NTPase B204 GxxxxGKS 1 n/a
e4ai6A14 A:3777-3903 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.230 GLUTATHIONE S-TRANSFERASE n/a 390 PF03028 duplication, next to another Walker A containing domain
e4ai6A6 A:2028-2217 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1403 GLUTATHIONE S-TRANSFERASE GxxxxGK 117 PF12774
e4ai6A8 A:2378-2564 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.35 GLUTATHIONE S-TRANSFERASE GxxGxGKT 431 PF12775
e4ai6A10 A:2693-2922 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.36 GLUTATHIONE S-TRANSFERASE GxxGxGK 32 PF12780
e4ai6A12 A:3372-3523 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1414 GLUTATHIONE S-TRANSFERASE n/a 508 PF12781 duplication, next to another Walker A containing domain
e4ai6A4 A:1761-1927 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.224 GLUTATHIONE S-TRANSFERASE GxxxxGK 117 PF12774
e1t9hA2 A:68-186,A:206-298 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.85 GTPASE ENGC GxxGxGKS 64 PF03193 circular permutation
e2qm8A1 A:5-327 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.51 GTPASE/ATPASE GxxGxGKST 7 PF03308
e1sviA1 A:1-195 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.258 GTP-binding protein YSXC GxxxxGKST; LhhhD 677 PF01926
e1yzuA1 A:17-181 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.144 Guanine nucleotide-binding protein G(i) GxxxxGKT; LhhhD 60 PF00071
e5ca9A1 A:26-313 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1424 guanosine triphosphatase Sey1p GxxxxGKST 8 PF05879
e1gkyA1 A:0-186 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.102 Guanylate kinase GxxGxGK 11 PF00625
e4f91B4 B:402-682 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.961 helicase GxGKT; DEAD 181 PF00270
e1t8tA1 A:136-406 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.159 heparan sulfate D-glucosaminyl 3-O-sulfotransferase GxxKSGT; LhhhhxD 45 PF00685
e1htwA1 A:1-158 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.170 HI0065 GxxGxGKT 801 PF02367
e2w00A3 A:470-731 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.179 HsdR subunit of the EcoR124I restriction enzyme n/a n/a n/a duplication, next to another Walker A containing domain
e2axpA1 A:2-165 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.463 hypothetical protein BSU20280 GxxGxGKT 22 PF02223
e2az4A2 A:225-379 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.210 hypothetical protein EF2904 n/a n/a n/a Beta-CASP domain
e1ofuX1 X:43-161 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.158 HYPOTHETICAL PROTEIN PA3008 n/a 10 PF03846 Unlike RecA, SulA is not an ATPase. SulA lacks a P-loop sequence between S1 and H1, and a tryptophan (Trp-91)side chain occupies the region where a nucleotide base wouldnormally be. The reason for the strong structural similarity to RecA is unknown PMID:12808143
e2ekdA1 A:1-203 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.84 Hypothetical protein PH0250 n/a 6 PF03192 98.16 HHS prob with e4ejsC1 Elongator complex protein 6 (2004.1.1.347, PF09807, contains Walker B)
e1nijA2 A:2-223 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1408 Hypothetical protein yjiA GxxGxGKT 43 PF02492
e1ye8A1 A:1-178 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.133 Hypothetical UPF0334 kinase-like protein AQ_1292 GxxGxGKT; LhhhDE 27 PF03266
e2b8wA1 A:6-308 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.98 Interferon-induced guanylate-binding protein 1 GxxxxGKS; LhhhD 12 PF02263
e1ry6A1 A:1-330 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.116 Internal Kinesin GxxGxGKT 71 PF00225
e3uc9A1 A:2-185 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.43 Irc6p Conserved Clathrin Accessory Protein GxxxxGKT 60 PF00071 degraded motif
e4znkA1 A:3-260 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.240 Large Terminase ATPase GxGxGKT 24 PF03237
e4ieiA3 A:5-234 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.164 large terminase subunit gp2 GxxGxGKT 7 PF04466
e3gd7B1 B:1203-1444 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1347 Maltose/maltodextrin import ATP-binding protein malK GxxGxGKS; LhhhDE 55 PF00005
e4ndzA1 A:1069-1355 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.160 Maltose-binding periplasmic protein n/a 66 PF03567 Dali Z-score=10.9 with PF00685 (2004.1.1.159, e1nstA1 contains Walker A and B), similar topology and phosphate binding site
e2dkfA3 A:195-378 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.57 Metallo-beta-lactamase n/a 748 PF10996 Beta-CASP domain
e3f8tA1 A:182-379 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1422 minichromosome maintenance (MCM) protein GxxGxxKS 58 PF00493
e3ja855 5:336-572 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1307 Minichromosome Maintenance 5 GxxGxxKS 58 PF00493
e3j9mAX1 AX:51-195,AX:220-398 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1278 mitochondrial ribosome unit mS29 GxxGxGKS 25 PF10236
e5aj3g1 g:70-345 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1419 MITORIBOSOMAL PROTEIN MS29 GxxGxGKS 25 PF10236
e1xjcA1 A:1-38,A:59-165 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.125 MobB protein homolog GxxGxGKT 49 PF03205
e1p9nB1 B:1-169 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1434 Molybdopterin-guanine dinucleotide biosynthesis protein B GxxGxGKT 49 PF03205
e4yj1A1 A:226-508 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1423 multiprotein mitochondrial RNA binding complex 1 GxxGxGKST 31 PF09818
e3myhX2 X:2-33,X:81-700, X:733-747 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1426 Myosin II GxxGxGKT 16 PF00063
e1w7jA4 A:63-594,A:634-753 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.2 MYOSIN VA GxxGxGKT 16 PF00063
e4dbpA3 A:51-278,A:306-760 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1425 Myosin VI GxxGxGKT 16 PF00063
e4p7hA2 A:82-787 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1312 Myosin-7,Green fluorescent protein GxxGxGKT 16 PF00063
e5lc5O1 O:5-318 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1416 NADH dehydrogenase [ubiquinone] 1 alpha subunit 10 GxxGxGKS 13 PF01712
e2afhE1 E:1-289 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.59 NITROGENASE IRON PROTEIN 1 GxGGxGKS 8 PF00142
e4kxfK1 K:93-298 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.130 NLR family CARD domain-containing protein 4 GxxGxGKT; LhhhD 25 PF05729
e1lw7A1 A:220-411 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.26 NMN adenylytransferase and ribosylnicotinamide kinase NadR protein GxxGxGKT 71 PF13521
e4n0nA2 A:69-82,A:136-292 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.182 nonstructural protein 10 (helicase) GxxGxGKT; hhhhDE 45 PF13086
e1yksA3 A:325-484 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.196 NS3 helicase n/a 421 PF00271 duplication, next to another DEAD containing domain
e1yksA2 A:185-324 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.93 NS3 helicase GxGKT; DEAH 19 PF07652
e2r2aA1 A:1-191 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.178 N-terminal domain of zonular occludens toxin GxxGxGKT; GxLhhhDE 7 PF05707
e3n70A1 A:146-287 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.151 NTPase domain of the Sigma-54 transport activator GxxGxG 10 PF14532
e1w44A1 A:1-321 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.134 NTPase P4 GxxxxGKS 3 PF11602
e4xgcB1 B:326-495 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1415 Origin recognition complex subunit 2 GxGSK 140 PF04084
e1w5sA4 A:7-212 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.486 ORIGIN RECOGNITION COMPLEX SUBUNIT 2 ORC2 GxxGxGKT; LhhhDE 70 PF13401
e4xgcC1 C:46-269 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1420 Origin recognition complex subunit 3 LhhhhxD 23 PF07034
e3b85A1 A:116-320 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.138 phosphate starvation-induced ATPase PhoH2 GxxGxGKT 127 PF02562
e3ch4B1 B:-1-193 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.135 Phosphomavelonate Kinase GxxxxGK 47 PF04275
e4eq6B1 B:1-129,B:154-237 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.481 Platinum sensitivity protein 3 LhhhD 14 PF16836
e1yj5A1 A:351-522 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.32 polynucleotide kinase GxxGxGKS 69 PF13671
e4ohyA1 A:83-311 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1407 polynucleotide kinase Clp1 GxxxxGKTS 85 PF16575
e3rhfA2 A:4-262 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.140 Polyphosphate Kinase 2 GxxxxGK 10 PF03976
e1rz3A1 A:1-198 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.142 Possible Uridine Kinase GxxGxGKTS 10 PF00485
e5lj5Q3 Q:338-528,Q:712-747 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1295 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 GxGKT; DEAD 181 PF00270
e1tf5A4 A:396-570 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.183 Preprotein translocase secA n/a 421 PF00271 duplication, next to another Walker A containing domain
e1tf5A3 A:1-226,A:349-395 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.148 Preprotein translocase secA GxGKT; DEAD 86 PF07517
e1t6nA1 A:45-251 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.73 Probable ATP-dependent RNA helicase GxGKT; DEAD 181 PF00270
e2l8bA1 A:381-569 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1432 Protein traI n/a n/a n/a fragment of Walker A containing protein
e1sgwA1 A:1-200 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1404 putative ABC transporter GxxGxGKS; LhhhDE 55 PF00005
e2bdtA1 A:1-176 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1255 Putative Gluconate Kinase GxxGxGKT 58 PF13238
e2g0tA2 A:144-338 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.228 putative nucleotide binding protein (tm0796) GxxxxxGK 43 PF07755
e5da9A1 A:2-180,A:1142-1311 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1402 Putative uncharacterized protein GxxGxGKTS 204 PF13476
e5d0nA1 A:126-257 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1427 Pyruvate orthophosphate dikinase n/a 353 PF03618 duplication, next to another Walker A containing domain
e5d0nA2 A:258-426 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1428 Pyruvate orthophosphate dikinase GxxxxGKT 353 PF03618
e4bj6.1 F:36-48,A:60-151, A:188-282 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.186 RAP1-INTERACTING FACTOR 2 n/a n/a n/a Dali Z-score=14.3 with PF13401 (2004.1.1.486, e5zr1D2 contains Walker A and B), similar topology
e3lluA1 A:61-237 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.101 Ras-related GTP-binding protein C GxxxxGKTS 29 PF04670
e1u94A2 A:6-268 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.237 RecA protein GxxxGKT; LhhhD 15 PF00154
e2wjvA3 A:286-322,A:415-699 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1401 REGULATOR OF NONSENSE TRANSCRIPTS 1 GxxGxGKT; hhhhDE 45 PF13086
e1uaaA1 A:2-307 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.171 Rep helicase GxGKT; DEAD 36 PF00580
e1uaaA2 A:308-640 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.173 Rep helicase n/a 24 PF13361 duplication, next to another Walker A containing domain
e3vkwA2 A:818-991 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.509 REPLICASE LARGE SUBUNIT GxxGxGKS; hhhhDE 72 PF01443
e4n0nA4 A:293-401 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.508 REPLICASE POLYPROTEIN 1AB n/a n/a ? duplication, next to another Walker A containing domain
e4a2wA3 A:245-455 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.488 RETINOIC ACID INDUCIBLE PROTEIN I GxGKT; DEAD 181 PF00270
e1xpuA3 A:129-417 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.53 Rho transcription termination factor GxxGxGK 495 PF00006
e5iw7A1 A:67-250 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1431 Ribosome biogenesis protein TSR1 degraded motif n/a n/a
e3zw6A1 A:68-222 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1338 Rubisco activase GxxGxGKT; hhhhDE 207 PF00004
e2c9oC1 C:7-128,C:231-246, C:277-368 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.582 RuvB-like helicase RuvBL1 GxxGxGK; DEAH 15 PF06068
e2r8rA1 A:0-208 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.115 sensor protein KdpD GxxxGxGKT; LhhhDE 257 PF02702
e3ftqA1 A:34-305 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.149 SEPTIN-2 GxxGxGKT 13 PF00735
e4cbiD1 D:206-353 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.976 SERINE PROTEASE NS3 GxGKT; DEAD 181 PF00270
e1viaA1 A:5-165 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.152 shikimate kinase GxGKS 84 PF01202
e1w1wA1 A:2-69,A:89-169, A:1067-1223 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.239 Smc1hd:Scc1-C complex, ATPgS GxxGxGKS; DEAD 28 PF02463
e4etpB1 B:320-638 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.479 Spindle pole body-associated protein VIK1 GxGKT 47 PF16796
e4pj3A3 A:416-492,A:660-706, A:795-1134 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.8 spliceosomal helicase GxxGxGKT; hhhhDE 45 PF13086
e4pj3A4 A:1135-1381 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.10 spliceosomal helicase Aquarius n/a 107 PF13087 duplication, next to another Walker A containing domain
e1texA1 A:3-267 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.162 STF0 SULFOTRANSFERASE n/a 8 PF09037 99.8 HHS prob with e1t8tA1 sulfotransferase (2004.1.1.159, PF00685, contains Walker A)
e1vciA2 A:7-245 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1346 sugar-binding transport ATP-binding protein GxxGxGKS; LhhhDE 55 PF00005
e4mubA1 A:-1-257 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.477 SULFOTRANSFERASE GxxxxGT 275 PF17784
e1svmA1 A:417-547 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.139 SV40 large T antigen helicase domain GxxxxGKT 3 PF06431
e4itmA1 A:1-206,A:298-315 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.119 Tetraacyldisaccharide 4'-kinase LpxK GGxGKT 118 PF02606
e2b8tA2 A:11-149 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.242 Thymidine kinase GxxxxGKS; LhhhDE 11 PF00265
e1e2kA1 A:46-374 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.108 thymidine kinase GxxGxGKTS 5 PF00693
e4tmkA1 A:2-211 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.166 thymidylate kinase (TmpK) GxxGxGKT 22 PF02223
e5j1sA1 A:55-271 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1012 Torsin-1A GxxGxGK 8 PF06309
e4tvsA1 A:360-583 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.118 Torsin-1A-interacting protein 1 n/a 26 PF05609 Dali Z-score=15.7 with PF00004 (2004.1.1.190, e5vy9A1 contains Walker A and B), similar topology
e2eyqA4 A:349-465 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.180 transcription-repair coupling factor n/a n/a n/a duplication, next to another Walker A containing domain
e2eyqA6 A:779-989 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.197 Transcription-repair coupling factor n/a 421 PF00271 duplication, next to another Walker A containing domain
e5ifwB1 B:460-648,B:736-760 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1357 Transitional endoplasmic reticulum ATPase GxxGxGKT; hhhhDE 207 PF00004
e2qgnA1 A:2-314 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1300 tRNA delta(2)-isopentenylpyrophosphate transferase GxxxxGKT 7 PF01745
e4fw9A1 A:1-74,A:260-388 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.223 TTC1975 PEPTIDASE GxxGxGK 208 PF13654
e2oap11 1:5-511 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.163 Type II secretion system protein GxxGxGKT 21 PF00437
e4ag5A1 A:205-588 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1 Type IV secretory pathway VirB4 components-like protein GxGKS; hhhhD 45 PF01935
e3la6A1 A:451-719 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.29 tyrosine kinase Wzc GGxGKTT 57 PF13614
e3fdiA1 A:3-42,A:77-196 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.72 uncharacterized protein GxGG 53 PF13189
e4anjA1 A:53-816 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1400 UNCONVENTIONAL MYOSIN-VI, GREEN FLUORESCENT PROTEIN GxxGxGKT 16 PF00063
e3bh1A1 A:4-339 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.229 UPF0371 protein DIP2346 GxGxGK 127 PF08903 circular permutation
e3zqjF1 F:2-119,F:408-611 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1361 UvrABC endonuclease GxxGxGKS; LhhhDE 55 PF00005
e3jb6B1 B:324-560 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.560 Viral structural protein 4 GxGKTS 1 n/a
e3m4yA2 A:23-445 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1264 V-type ATP synthase alpha chain GxxGxGK 495 PF00006
e1w36D2 D:361-466,D:523-606 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.174 XODEOXYRIBONUCLEASE V ALPHA CHAIN n/a 81 PF13538 duplication, next to another Walker A containing domain
e2vl7A1 A:9-194,A:307-346 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.74 XPD helicase DEAH 21 PF06733
e2vl7A3 A:348-540 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.106 XPD helicase n/a 98 PF13307 duplication, next to another Walker A containing domain
e3hgqA1 A:27-331 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.103 Yeast class II Hda1 histone deacetylase hhhhD 21 PF11496
e1srqA2 A:191-379 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1466 Ras-like guanine-nucleotide-binding protein n/a 249 PF02145 Dali Z-score=8.0 with PF02421 (2004.1.1.258, e3a1wA1 contains Walker A), same topology
e5nkkF1 F:59-122,F:143-151, F:172-284,F:308-364 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1020 Protein smg-9 GxxGxGKS; LhhhDE 55 PF00005
e5o9gW2 W:607-841 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1463 Chromo domain-containing protein 1 n/a 421 PF00271 observed as duplication, next to of different Walker A containing domains (PF00176, 2004.1.1.154)
e6nz5A1 A:19-153,A:289-485 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1480 YcjX Stress Protein GxxxxGK 88 PF04317
e6rd4X1 X:109-574 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1482 ATP synthase subunit beta GxxGxGK 495 PF00006
e3ajeA2 A:238-350 P-loop containing nucleoside triphosphate hydrolases 2004.1.1.1496 Sua5 n/a 656 PF03481
e1ko7A1 A:130-298 PEP carboxykinase catalytic C-terminal domain 2004.1.2.1 Hpr kinase/phosphatase GxxGxGKS 58 PF07475
e1khbA1 A:260-622 PEP carboxykinase catalytic C-terminal domain 2004.1.2.3 Phosphoenolpyruvate carboxykinase GKT 200 PF00821
e2olrA1 A:228-540 PEP carboxykinase catalytic C-terminal domain 2004.1.2.2 Phosphoenolpyruvate carboxykinase GxxGxGKTT 269 PF01293
e2c42A3 A:416-668 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 2004.1.3.1 Pyruvate-Ferredoxin Oxidoreductase GGxG 86 PF01558 Reduced Walker A motif. Does not contain RLM, but is homologous to P-loop (PMID: 29581263)