ECOD: domain e2afhE1

Domain ID e2afhE1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Fer4_NifH

UID:	000009644
Type:	Manual and representative domain
Range:	E:1-289
Ligands:	PG4 SF4
PDB:	2afh
PDB Description:	Nitrogenase iron protein 1
UniProt:	P00459
Species:	Azotobacter vinelandii

Domain
In chain context
In PDB context

Structure of domain e2afhE1

Domains in the same chain:

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e2afhE1	E:1-289	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2afhA2	A:5-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhA1	A:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhA3	A:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhB1	B:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhB3	B:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhB2	B:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhC2	C:4-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhC3	C:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhC1	C:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhD1	D:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhD3	D:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhD2	D:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afhE1	E:1-289	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afhF1	F:1-286	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2afhE1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2afhF1	E:X,Y,Z->F:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:x,y,z->B:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:-X+1,Y-1/2,-Z+1/2->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:x,y,z->D:-X+1/2,-Y+1,Z-1/2	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:x,y,z->C:-X+1/2,-Y+1,Z-1/2	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:-X+1,Y-1/2,-Z+1/2->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:X-1/2,-Y+3/2,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afhF1	E:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol