Domain ID e1yksA3

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Helicase_C
UID: 000009762
Type: Manual and representative domain
Range: A:325-484
PDB: 1yks
PDB Description: GENOME POLYPROTEIN [CONTAINS: FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT]
UniProt: P03314
Species: Yellow fever virus

Structure of domain e1yksA3

Structural contacts of domain e1yksA3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yksA2 A:x,y,z->A:-X+1,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e1yksA2 A:x,y,z->A:X,Y-1,Z P-loop domains-related Interaction Interface Pymol
e1yksA1 A:x,y,z->A:X,Y-1,Z C-terminal helical domain of RNA helicase Interaction Interface Pymol
e1yksA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1 C-terminal helical domain of RNA helicase Interaction Interface Pymol
e1yksA3 A:x,y,z->A:-X+1,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e1yksA3 A:-X+1,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yksA1 A:X-1,Y,Z->A:x,y,z C-terminal helical domain of RNA helicase Interaction Interface Pymol