Nucleic acid-binding proteins (101 domains)

Class (b): All beta proteins [48724]

Fold (b.40): OB-fold [50198]

Superfamily (b.40.4): Nucleic acid-binding proteins [50249]

Family (b.40.4.1): Anticodon-binding domain [50250]

1.d1eova1
|
DALI Alignment & SCR definition (48 / 134 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1b8aa1
|
DALI Alignment & SCR definition (46 / 103 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1n9wa1
|
DALI Alignment & SCR definition (51 / 93 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d1l0wa1
|
DALI Alignment & SCR definition (47 / 104 SCRs)
|
PDB
|
Features & SCI
|
PSSM

5.d1e1oa1
|
DALI Alignment & SCR definition (46 / 143 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.2): DNA helicase RuvA subunit, N-terminal domain [50259]

1.d1cuka3
|
DALI Alignment & SCR definition (49 / 64 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1bvsa3
|
DALI Alignment & SCR definition (49 / 63 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1ixra2
|
DALI Alignment & SCR definition (51 / 62 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.3): Single strand DNA-binding domain, SSB [50263]

1.d3ulla_
|
DALI Alignment & SCR definition (47 / 106 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1qvca_
|
DALI Alignment & SCR definition (46 / 145 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1ue1a_
|
DALI Alignment & SCR definition (48 / 113 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d1se8a_
|
DALI Alignment & SCR definition (0 / 213 SCRs)
|
PDB
|
Features & SCI
|
PSSM

5.d1o7ia_
|
DALI Alignment & SCR definition (47 / 115 SCRs)
|
PDB
|
Features & SCI
|
PSSM

6.d2b3ga1
|
DALI Alignment & SCR definition (47 / 109 SCRs)
|
PDB
|
Features & SCI
|
PSSM

7.d1jmca1
|
DALI Alignment & SCR definition (44 / 116 SCRs)
|
PDB
|
Features & SCI
|
PSSM

8.d1jmca2
|
DALI Alignment & SCR definition (45 / 122 SCRs)
|
PDB
|
Features & SCI
|
PSSM

9.d1l1oc_
|
DALI Alignment & SCR definition (48 / 173 SCRs)
|
PDB
|
Features & SCI
|
PSSM

10.d2pi2a1
|
DALI Alignment & SCR definition (48 / 121 SCRs)
|
PDB
|
Features & SCI
|
PSSM

11.d2pi2e1
|
DALI Alignment & SCR definition (49 / 115 SCRs)
|
PDB
|
Features & SCI
|
PSSM

12.d1kxla_
|
DALI Alignment & SCR definition (42 / 187 SCRs)
|
PDB
|
Features & SCI
|
PSSM

13.d1jb7a1
|
DALI Alignment & SCR definition (39 / 169 SCRs)
|
PDB
|
Features & SCI
|
PSSM

14.d1jb7a2
|
DALI Alignment & SCR definition (45 / 124 SCRs)
|
PDB
|
Features & SCI
|
PSSM

15.d1jb7a3
|
DALI Alignment & SCR definition (39 / 167 SCRs)
|
PDB
|
Features & SCI
|
PSSM

16.d1jb7b_
|
DALI Alignment & SCR definition (40 / 216 SCRs)
|
PDB
|
Features & SCI
|
PSSM

17.d1qzga_
|
DALI Alignment & SCR definition (34 / 170 SCRs)
|
PDB
|
Features & SCI
|
PSSM

18.d1xjva1
|
DALI Alignment & SCR definition (40 / 140 SCRs)
|
PDB
|
Features & SCI
|
PSSM

19.d1xjva2
|
DALI Alignment & SCR definition (46 / 151 SCRs)
|
PDB
|
Features & SCI
|
PSSM

20.d1iyjb3
|
DALI Alignment & SCR definition (44 / 116 SCRs)
|
PDB
|
Features & SCI
|
PSSM

21.d1iyjb4
|
DALI Alignment & SCR definition (42 / 111 SCRs)
|
PDB
|
Features & SCI
|
PSSM

22.d1iyjb5
|
DALI Alignment & SCR definition (39 / 138 SCRs)
|
PDB
|
Features & SCI
|
PSSM

23.d1v1qa_
|
DALI Alignment & SCR definition (47 / 110 SCRs)
|
PDB
|
Features & SCI
|
PSSM

24.d1wjja_
|
DALI Alignment & SCR definition (46 / 145 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.4): Myf domain [50277]

1.d1jjcb3
|
DALI Alignment & SCR definition (41 / 113 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1fl0a_
|
DALI Alignment & SCR definition (43 / 164 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1pxfa_
|
DALI Alignment & SCR definition (44 / 111 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d1pyba_
|
DALI Alignment & SCR definition (44 / 107 SCRs)
|
PDB
|
Features & SCI
|
PSSM

5.d1gd7a_
|
DALI Alignment & SCR definition (42 / 109 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.5): Cold shock DNA-binding domain-like [50282]

1.d1c9oa_
|
DALI Alignment & SCR definition (47 / 66 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1sroa_
|
DALI Alignment & SCR definition (47 / 76 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1hh2p1
|
DALI Alignment & SCR definition (48 / 72 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d2asba1
|
DALI Alignment & SCR definition (45 / 76 SCRs)
|
PDB
|
Features & SCI
|
PSSM

5.d1go3e1
|
DALI Alignment & SCR definition (47 / 99 SCRs)
|
PDB
|
Features & SCI
|
PSSM

6.d1y14b1
|
DALI Alignment & SCR definition (44 / 86 SCRs)
|
PDB
|
Features & SCI
|
PSSM

7.d1hr0w_
|
DALI Alignment & SCR definition (47 / 71 SCRs)
|
PDB
|
Features & SCI
|
PSSM

8.d1jt8a_
|
DALI Alignment & SCR definition (37 / 102 SCRs)
|
PDB
|
Features & SCI
|
PSSM

9.d1d7qa_
|
DALI Alignment & SCR definition (45 / 143 SCRs)
|
PDB
|
Features & SCI
|
PSSM

10.d1kl9a2
|
DALI Alignment & SCR definition (48 / 74 SCRs)
|
PDB
|
Features & SCI
|
PSSM

11.d2ahob2
|
DALI Alignment & SCR definition (47 / 79 SCRs)
|
PDB
|
Features & SCI
|
PSSM

12.d1luza_
|
DALI Alignment & SCR definition (42 / 85 SCRs)
|
PDB
|
Features & SCI
|
PSSM

13.d1jjga_
|
DALI Alignment & SCR definition (42 / 102 SCRs)
|
PDB
|
Features & SCI
|
PSSM

14.d1a62a2
|
DALI Alignment & SCR definition (41 / 78 SCRs)
|
PDB
|
Features & SCI
|
PSSM

15.d1bkba2
|
DALI Alignment & SCR definition (48 / 65 SCRs)
|
PDB
|
Features & SCI
|
PSSM

16.d1x6oa2
|
DALI Alignment & SCR definition (39 / 79 SCRs)
|
PDB
|
Features & SCI
|
PSSM

17.d1khia2
|
DALI Alignment & SCR definition (43 / 71 SCRs)
|
PDB
|
Features & SCI
|
PSSM

18.d1rl2a2
|
DALI Alignment & SCR definition (35 / 66 SCRs)
|
PDB
|
Features & SCI
|
PSSM

19.d1vqoa2
|
DALI Alignment & SCR definition (36 / 90 SCRs)
|
PDB
|
Features & SCI
|
PSSM

20.d2uubl1
|
DALI Alignment & SCR definition (47 / 118 SCRs)
|
PDB
|
Features & SCI
|
PSSM

21.d2gy9q1
|
DALI Alignment & SCR definition (45 / 78 SCRs)
|
PDB
|
Features & SCI
|
PSSM

22.d1ny4a_
|
DALI Alignment & SCR definition (40 / 71 SCRs)
|
PDB
|
Features & SCI
|
PSSM

23.d1ueba2
|
DALI Alignment & SCR definition (45 / 63 SCRs)
|
PDB
|
Features & SCI
|
PSSM

24.d1ueba3
|
DALI Alignment & SCR definition (35 / 58 SCRs)
|
PDB
|
Features & SCI
|
PSSM

25.d1smxa_
|
DALI Alignment & SCR definition (46 / 87 SCRs)
|
PDB
|
Features & SCI
|
PSSM

26.d1u0la1
|
DALI Alignment & SCR definition (48 / 66 SCRs)
|
PDB
|
Features & SCI
|
PSSM
|
Prediction Results

27.d1t9ha1
|
DALI Alignment & SCR definition (48 / 67 SCRs)
|
PDB
|
Features & SCI
|
PSSM

28.d1wfqa_
|
DALI Alignment & SCR definition (48 / 89 SCRs)
|
PDB
|
Features & SCI
|
PSSM

29.d1wi5a_
|
DALI Alignment & SCR definition (44 / 119 SCRs)
|
PDB
|
Features & SCI
|
PSSM

30.d2ix0a1
|
DALI Alignment & SCR definition (45 / 90 SCRs)
|
PDB
|
Features & SCI
|
PSSM

31.d2ix0a2
|
DALI Alignment & SCR definition (42 / 75 SCRs)
|
PDB
|
Features & SCI
|
PSSM

32.d2ix0a3
|
DALI Alignment & SCR definition (45 / 87 SCRs)
|
PDB
|
Features & SCI
|
PSSM

33.d2ja9a1
|
DALI Alignment & SCR definition (49 / 90 SCRs)
|
PDB
|
Features & SCI
|
PSSM

34.d2r7da1
|
DALI Alignment & SCR definition (44 / 58 SCRs)
|
PDB
|
Features & SCI
|
PSSM

35.d2nn6h1
|
DALI Alignment & SCR definition (46 / 82 SCRs)
|
PDB
|
Features & SCI
|
PSSM

36.d2nn6i1
|
DALI Alignment & SCR definition (46 / 125 SCRs)
|
PDB
|
Features & SCI
|
PSSM

37.d2je6i1
|
DALI Alignment & SCR definition (43 / 87 SCRs)
|
PDB
|
Features & SCI
|
PSSM

38.d2ba0a1
|
DALI Alignment & SCR definition (46 / 83 SCRs)
|
PDB
|
Features & SCI
|
PSSM

39.d2vnud1
|
DALI Alignment & SCR definition (42 / 95 SCRs)
|
PDB
|
Features & SCI
|
PSSM

40.d2vnud2
|
DALI Alignment & SCR definition (44 / 80 SCRs)
|
PDB
|
Features & SCI
|
PSSM

41.d2vnud3
|
DALI Alignment & SCR definition (41 / 103 SCRs)
|
PDB
|
Features & SCI
|
PSSM

42.d3bzka4
|
DALI Alignment & SCR definition (45 / 94 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.6): DNA ligase/mRNA capping enzyme postcatalytic domain [50307]

1.d1ckma1
|
DALI Alignment & SCR definition (41 / 89 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1p16a1
|
DALI Alignment & SCR definition (44 / 145 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d1a0ia1
|
DALI Alignment & SCR definition (44 / 101 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d1fvia1
|
DALI Alignment & SCR definition (42 / 80 SCRs)
|
PDB
|
Features & SCI
|
PSSM

5.d1dgsa2
|
DALI Alignment & SCR definition (36 / 86 SCRs)
|
PDB
|
Features & SCI
|
PSSM

6.d1x9na2
|
DALI Alignment & SCR definition (41 / 148 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.7): Phage ssDNA-binding proteins [50315]

1.d1gvpa_
|
DALI Alignment & SCR definition (35 / 87 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1pfsa_
|
DALI Alignment & SCR definition (38 / 78 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d2a1ka1
|
DALI Alignment & SCR definition (32 / 210 SCRs)
|
PDB
|
Features & SCI
|
PSSM

4.d1je5a_
|
DALI Alignment & SCR definition (44 / 181 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.8): RNA polymerase subunit RBP8 [50321]

1.d1twfh_
|
DALI Alignment & SCR definition (44 / 133 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.9): RecG wedge domain [69259]

1.d1gm5a2
|
DALI Alignment & SCR definition (45 / 180 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.10): Hypothetical protein MTH1 (MT0001), insert domain [74955]

1.d1k3ra1
|
DALI Alignment & SCR definition (48 / 71 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.11): DNA replication initiator (cdc21/cdc54) N-terminal domain [89332]

1.d1ltla_
|
DALI Alignment & SCR definition (48 / 239 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.12): TRAM domain [101768]

1.d1uwva1
|
DALI Alignment & SCR definition (43 / 60 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d1yeza1
|
DALI Alignment & SCR definition (46 / 68 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.13): RecO N-terminal domain-like [117204]

1.d1u5ka1
|
DALI Alignment & SCR definition (50 / 78 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.14): TIP49 domain [141315]

1.d2cqaa1
|
DALI Alignment & SCR definition (41 / 82 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.15): SSO2064-like [159109]

1.d2gnra1
|
DALI Alignment & SCR definition (40 / 137 SCRs)
|
PDB
|
Features & SCI
|
PSSM

Family (b.40.4.16): RNB domain-like [159112]

1.d2vnud4
|
DALI Alignment & SCR definition (0 / 416 SCRs)
|
PDB
|
Features & SCI
|
PSSM

2.d2r7da2
|
DALI Alignment & SCR definition (7 / 401 SCRs)
|
PDB
|
Features & SCI
|
PSSM

3.d2ix0a4
|
DALI Alignment & SCR definition (0 / 385 SCRs)
|
PDB
|
Features & SCI
|
PSSM