Q15431 SYCP1_HUMAN
Gene name: SYCP1
Protein name: Synaptonemal complex protein 1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell cycle GO:0007049
- cell differentiation GO:0030154
- cell division GO:0051301
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- chromosome segregation GO:0007059
- DNA metabolic process GO:0006259
- protein-containing complex assembly GO:0065003
- reproduction GO:0000003
- response to stress GO:0006950
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8N370 | SLC43A2 | 0.77472 |
transport
GO:0006810 |
| 2 | Q9UNX3 | RPL26L1 | 0.76996 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 ... |
| 3 | Q9UKF2 | ADAM30 | 0.76238 |
reproduction
GO:0000003 |
| 4 | Q9Y2R4 | DDX52 | 0.73608 |
cellular nitrogen compound metabolic process
GO:0034641 ribosome biogenesis GO:0042254 |
| 5 | O75586 | MED6 | 0.73458 |
biosynthetic process
GO:0009058 cellular component assembly GO:0022607 cellular nitrogen compound metabolic process GO:0034641 ... |
| 6 | Q7Z4N2 | TRPM1 | 0.72847 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
| 7 | P0C7A2 | FAM153B | 0.72424 | |
| 8 | Q5T9S5 | CCDC18 | 0.71172 | |
| 9 | P63313 | TMSB10 | 0.7088 |
cellular component assembly
GO:0022607 cytoskeleton organization GO:0007010 protein-containing complex assembly GO:0065003 |
| 10 | Q9NZH5 | PTTG2 | 0.70708 |
cell cycle
GO:0007049 chromosome organization GO:0051276 chromosome segregation GO:0007059 ... |
20 40 60 80 100
AA: MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGENIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSE
STMI:
DO_DISOPRED3: DDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....DDDDDDDDD.....
DO_IUPRED2A: ...................DDDDD................................D.DDDD.........................DDDDD........
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....DDDDDDDDD.....
CONSENSUS_MOBI: ....................................................................................................
RICH_[F]: FFksFnkcteddFeFpF
RICH_[N]: NlskNgeNidsdpalqkvN
RICH_[V]: VnflpVleqV
RICH_[DF]: DstFFksFnkcteDD
RICH_[FN]: FpFaktNlskNgeN
RICH_fLPS_[F]: dstFFksFnkcteddFeFpF
120 140 160 180 200
AA: GLSRVYSKLYKEAEKIKKWKVSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKY
STMI:
DO_DISOPRED3: ......................................................................DD..D..DD.....................
DO_IUPRED2A: ......................................................................D.........................DDD.
DO_SPOTD: DDDDDDDDDDDDDDDD..D...D...D.........................................................................
CONSENSUS: ......................................................................D.............................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: EYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE
STMI:
DO_DISOPRED3: .............................................DDDDDDDDDDD........................D..D...D............
DO_IUPRED2A: ..................................................................................................DD
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: .....D..............................................................................................
320 340 360 380 400
AA: EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEK
STMI:
DO_DISOPRED3: DDD............D.........D...D..DD..DDDD..................D.DDDDDD..D...............................
DO_IUPRED2A: DDD...DDDDDDD..D.......................................DDDDDDDDDDDDDD...D...........................
DO_SPOTD: ....................................................................................................
CONSENSUS: DDD............D..........................................DDDDDDDDDDD...............................
CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500
AA: NEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVK
STMI:
DO_DISOPRED3: .....................D............DD.........D.DDDDDD..D..........D.................................
DO_IUPRED2A: .................DDDDDDDDDDD.....................................................DD...............DD
DO_SPOTD: ....................................................................................................
CONSENSUS: .....................D..............................................................................
CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600
AA: DLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN
STMI:
DO_DISOPRED3: ...........DD.D...DD........DD..D.......D...........................................................
DO_IUPRED2A: ....DDDDDDDDDDD.DDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDDD.DDDD..........D..........
DO_SPOTD: ....................................................................................................
CONSENSUS: ...........DDDDDDDD.........DDDDD.......D...........................................................
CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700
AA: CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEID
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: .DDDDDD....DD.....DD.DDDDDDDDD......................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: .............................................................DDDDDDDDDDD............................
720 740 760 780 800
AA: KRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFL
STMI:
DO_DISOPRED3: ........................................DDDDDDDDDDD...........D.....................D............DDD
DO_IUPRED2A: ...................................DD..................................DDDDDDDDDDDDDDDDDDD.DDDD.....
DO_SPOTD: ...........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: ...................................DDDDDDDDDDDDDDDD...........D........DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: .....................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[E]: EEkEklkrEakEntatlkE
RICH_[K]: KeKlKreaKentatlKeKKdKKtqtfl
RICH_[T]: TaTlkekkdkkTqTfl
RICH_[EK]: EEKEKlKrEaKEntatlKEKKdK
RICH_[KT]: KenTaTlKeKKdKKTqTfl
RICH_MOBI_[E]: ErEEkEklkrEakEntatlkE
RICH_MOBI_[K]: KeKlKreaKentatlKeKKdKK
RICH_MOBI_[T]: TaTlkekkdkkTqT
RICH_MOBI_[EK]: ErEEKEKlKrEaKEntatlKEKKdK
RICH_MOBI_[KL]: LKeKKdKKtqtfL
RICH_MOBI_[KT]: KenTaTlKeKKdKKTqT
RICH_fLPS_MOBI_[K]: KeKlKreaKentatlKeKKdKK
820 840 860 880 900
AA: LETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLWTSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ..................DDDDDDDDD......................DDDDDDDDDDDDDDDDDDDDDDDDDDDD.....................D.
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: D...................................................................................................
RICH_[PT]: TlsTPlPkayTvkTPTkP
RICH_[K]: letpeiywK KntlstplpKaytvKtptKpK
RICH_[T]: leT TsaknTlsTplpkayTvkTpT TTdl
RICH_[DF]: FeFDinsDssettD
RICH_[TY]: YlwTsaknTlsTplpkaYT
RICH_[EK]: EnlnipiEEsKKKrKmafE
RICH_[EL]: EttdL
RICH_[ET]: ETTdl
RICH_[FK]: KKKrKmaFeF
RICH_[KP]: KntlstPlPKaytvKtPtKPK
RICH_[KT]: leT KnTlsTplpKayTvKTpTKpK
RICH_[LT]: TTdL
RICH_MOBI_[KL]: L
920 940 960
AA: LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIAKMDRKKKLKEAEKLFV
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................D...DD.D.D.
DO_IUPRED2A: DD.......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...............................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DD.................DDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................DDDDDDDDDD.
CONSENSUS_MOBI: ............................................................................
RICH_[K]: KtpKKapsslttpgstlK
RICH_[T]: lsmvseeeTlkT TpkkapsslTTpgsT
RICH_[EL]: LsmvsEEEtLktL
RICH_[ET]: lsmvsEEETlkT
RICH_[KT]: KTpKKapsslTTpgsTlK
RICH_[LT]: LsmvseeeTLkTL