Q15431 SYCP1_HUMAN
Gene name: SYCP1
Protein name: Synaptonemal complex protein 1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell cycle GO:0007049
- cell differentiation GO:0030154
- cell division GO:0051301
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- chromosome segregation GO:0007059
- DNA metabolic process GO:0006259
- protein-containing complex assembly GO:0065003
- reproduction GO:0000003
- response to stress GO:0006950
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8N370 | SLC43A2 | 0.77472 | transport GO:0006810 |
| 2 | Q9UNX3 | RPL26L1 | 0.76996 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 ... |
| 3 | Q9UKF2 | ADAM30 | 0.76238 | reproduction GO:0000003 |
| 4 | Q9Y2R4 | DDX52 | 0.73608 | cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
| 5 | O75586 | MED6 | 0.73458 | biosynthetic process GO:0009058 cellular component assembly GO:0022607 cellular nitrogen compound metabolic process GO:0034641 ... |
| 6 | Q7Z4N2 | TRPM1 | 0.72847 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
| 7 | P0C7A2 | FAM153B | 0.72424 | |
| 8 | Q5T9S5 | CCDC18 | 0.71172 | |
| 9 | P63313 | TMSB10 | 0.7088 | cellular component assembly GO:0022607 cytoskeleton organization GO:0007010 protein-containing complex assembly GO:0065003 |
| 10 | Q9NZH5 | PTTG2 | 0.70708 | cell cycle GO:0007049 chromosome organization GO:0051276 chromosome segregation GO:0007059 ... |
20 40 60 80 100 AA: MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGENIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSE STMI: DO_DISOPRED3: DDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....DDDDDDDDD..... DO_IUPRED2A: ...................DDDDD................................D.DDDD.........................DDDDD........ DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....DDDDDDDDD..... CONSENSUS_MOBI: .................................................................................................... RICH_[F]: FFksFnkcteddFeFpF RICH_[N]: NlskNgeNidsdpalqkvN RICH_[V]: VnflpVleqV RICH_[DF]: DstFFksFnkcteDD RICH_[FN]: FpFaktNlskNgeN RICH_fLPS_[F]: dstFFksFnkcteddFeFpF
120 140 160 180 200 AA: GLSRVYSKLYKEAEKIKKWKVSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKY STMI: DO_DISOPRED3: ......................................................................DD..D..DD..................... DO_IUPRED2A: ......................................................................D.........................DDD. DO_SPOTD: DDDDDDDDDDDDDDDD..D...D...D......................................................................... CONSENSUS: ......................................................................D............................. CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: EYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE STMI: DO_DISOPRED3: .............................................DDDDDDDDDDD........................D..D...D............ DO_IUPRED2A: ..................................................................................................DD DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: .....D..............................................................................................
320 340 360 380 400 AA: EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEK STMI: DO_DISOPRED3: DDD............D.........D...D..DD..DDDD..................D.DDDDDD..D............................... DO_IUPRED2A: DDD...DDDDDDD..D.......................................DDDDDDDDDDDDDD...D........................... DO_SPOTD: .................................................................................................... CONSENSUS: DDD............D..........................................DDDDDDDDDDD............................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: NEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVK STMI: DO_DISOPRED3: .....................D............DD.........D.DDDDDD..D..........D................................. DO_IUPRED2A: .................DDDDDDDDDDD.....................................................DD...............DD DO_SPOTD: .................................................................................................... CONSENSUS: .....................D.............................................................................. CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600 AA: DLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN STMI: DO_DISOPRED3: ...........DD.D...DD........DD..D.......D........................................................... DO_IUPRED2A: ....DDDDDDDDDDD.DDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDDD.DDDD..........D.......... DO_SPOTD: .................................................................................................... CONSENSUS: ...........DDDDDDDD.........DDDDD.......D........................................................... CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700 AA: CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEID STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .DDDDDD....DD.....DD.DDDDDDDDD...................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: .............................................................DDDDDDDDDDD............................
720 740 760 780 800 AA: KRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFL STMI: DO_DISOPRED3: ........................................DDDDDDDDDDD...........D.....................D............DDD DO_IUPRED2A: ...................................DD..................................DDDDDDDDDDDDDDDDDDD.DDDD..... DO_SPOTD: ...........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ...................................DDDDDDDDDDDDDDDD...........D........DDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .....................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[E]: EEkEklkrEakEntatlkE RICH_[K]: KeKlKreaKentatlKeKKdKKtqtfl RICH_[T]: TaTlkekkdkkTqTfl RICH_[EK]: EEKEKlKrEaKEntatlKEKKdK RICH_[KT]: KenTaTlKeKKdKKTqTfl RICH_MOBI_[E]: ErEEkEklkrEakEntatlkE RICH_MOBI_[K]: KeKlKreaKentatlKeKKdKK RICH_MOBI_[T]: TaTlkekkdkkTqT RICH_MOBI_[EK]: ErEEKEKlKrEaKEntatlKEKKdK RICH_MOBI_[KL]: LKeKKdKKtqtfL RICH_MOBI_[KT]: KenTaTlKeKKdKKTqT RICH_fLPS_MOBI_[K]: KeKlKreaKentatlKeKKdKK
820 840 860 880 900 AA: LETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLWTSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..................DDDDDDDDD......................DDDDDDDDDDDDDDDDDDDDDDDDDDDD.....................D. DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: D................................................................................................... RICH_[PT]: TlsTPlPkayTvkTPTkP RICH_[K]: letpeiywK KntlstplpKaytvKtptKpK RICH_[T]: leT TsaknTlsTplpkayTvkTpT TTdl RICH_[DF]: FeFDinsDssettD RICH_[TY]: YlwTsaknTlsTplpkaYT RICH_[EK]: EnlnipiEEsKKKrKmafE RICH_[EL]: EttdL RICH_[ET]: ETTdl RICH_[FK]: KKKrKmaFeF RICH_[KP]: KntlstPlPKaytvKtPtKPK RICH_[KT]: leT KnTlsTplpKayTvKTpTKpK RICH_[LT]: TTdL RICH_MOBI_[KL]: L
920 940 960 AA: LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIAKMDRKKKLKEAEKLFV STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................D...DD.D.D. DO_IUPRED2A: DD.......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DD.................DDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................DDDDDDDDDD. CONSENSUS_MOBI: ............................................................................ RICH_[K]: KtpKKapsslttpgstlK RICH_[T]: lsmvseeeTlkT TpkkapsslTTpgsT RICH_[EL]: LsmvsEEEtLktL RICH_[ET]: lsmvsEEETlkT RICH_[KT]: KTpKKapsslTTpgsTlK RICH_[LT]: LsmvseeeTLkTL