Citrus Sinensis ID: 000056
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 2526 | 2.2.26 [Sep-21-2011] | |||||||
| F4IVL6 | 2554 | DnaJ homolog subfamily C | yes | no | 0.971 | 0.961 | 0.772 | 0.0 | |
| O75165 | 2243 | DnaJ homolog subfamily C | yes | no | 0.376 | 0.423 | 0.350 | 0.0 | |
| Q0K758 | 381 | Chaperone protein DnaJ OS | yes | no | 0.016 | 0.107 | 0.531 | 2e-06 | |
| P63036 | 397 | DnaJ homolog subfamily A | no | no | 0.015 | 0.100 | 0.6 | 2e-06 | |
| Q5NVI9 | 396 | DnaJ homolog subfamily A | no | no | 0.015 | 0.101 | 0.6 | 2e-06 | |
| P63037 | 397 | DnaJ homolog subfamily A | no | no | 0.015 | 0.100 | 0.6 | 2e-06 | |
| P31689 | 397 | DnaJ homolog subfamily A | no | no | 0.015 | 0.100 | 0.6 | 2e-06 | |
| Q5E954 | 397 | DnaJ homolog subfamily A | no | no | 0.015 | 0.100 | 0.6 | 2e-06 | |
| Q95JF4 | 397 | DnaJ homolog subfamily A | N/A | no | 0.015 | 0.100 | 0.6 | 2e-06 | |
| A1KR91 | 373 | Chaperone protein DnaJ OS | yes | no | 0.014 | 0.099 | 0.625 | 4e-06 |
| >sp|F4IVL6|GRV2_ARATH DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GN=GRV2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 3789 bits (9825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1930/2500 (77%), Positives = 2162/2500 (86%), Gaps = 45/2500 (1%)
Query: 17 EETEYLARYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGR 76
EE EYLARYLVVKHSWRGRYKRILCIS+ I+TLDPNTLAVTNSY+ S+F+GA+P++GR
Sbjct: 18 EEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTNSYDTGSNFDGASPLVGR 77
Query: 77 DDN----ANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRIRWVRLNAVAEFPVLHLR 132
D+N EF ++VRTDG+GKFKA KFSSR RASILTEL+R+RW ++ VAEF VLHLR
Sbjct: 78 DENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRLRWNQIRPVAEFQVLHLR 137
Query: 133 RRNSEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAY-GKRSETGGFV 191
RRN+EWVPYKLK+T+VG+EL D +SG+ RW LDFRDM SPAI+LLSDAY K +++ GFV
Sbjct: 138 RRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAIILLSDAYRTKSADSAGFV 197
Query: 192 LCPLYGRKSKAFQAAPGTTNSAIVSSLTKTAKSMVGLSLSVDSSQPLSVAEYIKRRAKEA 251
LCP+YGRKSKAF+AAPGTTNS+IV+SL KTAKSMVG+ LSVD SQ L+V+EY+ RRAKEA
Sbjct: 198 LCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDDSQLLTVSEYMTRRAKEA 257
Query: 252 VGADETPCGGWSVTRLRSAAHGTLNVSGLSLGIGPKGGLGEHGGAVSRQLILTRVSLVER 311
VGA+ETP G WSVTRLRSAAHGTLN+ GLSL IGPKGGLGEHG AV+ QLILT+ SLVER
Sbjct: 258 VGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHGDAVALQLILTKASLVER 317
Query: 312 RPDNYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQT 371
R DNYE VIVRPLS+VSSLVRFAEEPQMFAIEF+DGCP+ VYAS SRD+LLAA+ D LQT
Sbjct: 318 RIDNYEVVIVRPLSSVSSLVRFAEEPQMFAIEFSDGCPVLVYASISRDNLLAAILDTLQT 377
Query: 372 EGHYPVPVLPRLTMPGHRIDPPCGVVHMQVRKQRPVADMESTSMHLKHLAAVAKDAVAES 431
EGH P+PVLPRLTMPGHRIDPPCG V + Q VAD+E+ S+HLKHLAA AKDAVAE
Sbjct: 378 EGHCPIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCSLHLKHLAAAAKDAVAEG 437
Query: 432 GQVSGSRAKLWRRIREFNACIPYSGVPPSVEVPEVTLMALITMLPSTPNLPPESPPLPPP 491
G V G RA+LWRRIREFNACIPY+GVP + EVPEVTLMALITMLPSTPNLP ++PPLPPP
Sbjct: 438 GSVPGCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPSTPNLPVDAPPLPPP 497
Query: 492 SPKAAATVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAIL 551
SPKAAATV+GFV CLRRLL+SR+AASH+MSFPAAV RIMGLLRNGSEGVAAEAAGLIA L
Sbjct: 498 SPKAAATVIGFVTCLRRLLSSRSAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASL 557
Query: 552 IGGGSGDTNMLTDSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVL 611
IGG S D + DS+GE+HAT+MHTKSVLF+QQGY+ +LVNRL+PMSVSPL SMA+VEV
Sbjct: 558 IGGWSADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVF 617
Query: 612 ETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVAVIMRTIAEEDAIA 671
E M+C+PH ETTQYTVFVELLRQ+A LRRRLFALF HPAESVRET+AVIMRTIAEEDAIA
Sbjct: 618 EAMVCDPHGETTQYTVFVELLRQIAALRRRLFALFAHPAESVRETIAVIMRTIAEEDAIA 677
Query: 672 AESMRDAALRDGALLRHLLHAFFLPAGERREVSRQLVALWADSYQPALDLLSRVLPPGLV 731
AESMRDAALRDGALLRHLL+AF LPA ERREVSRQLVALWADSYQPALDLLSRVLPPGLV
Sbjct: 678 AESMRDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLV 737
Query: 732 AYLHTRSDGVLSEDANLEGSLTSRRQRRLLQQRKGRPGRGIASQEHSVPYVNNVEANDPT 791
AYLHTR D V+ +D + EGS T+RRQ+RLLQQR+GR +G+ +Q+ +P NNVEA D
Sbjct: 738 AYLHTRPDDVV-DDTDQEGSSTNRRQKRLLQQRRGRIAKGMGAQDIPLPPGNNVEAGDAA 796
Query: 792 RQKTSAFRGPGSHQTSNLDPSSG----QASAFQSPAARSGENLVSDIPYMGFSQNDHPAV 847
+ ++ P + Q D SS QASAF P D G SQN +PA
Sbjct: 797 KHMSANASVPDNFQRRAADSSSEASNPQASAF--PGV--------DSTIAGVSQNGYPAF 846
Query: 848 VATADSPLRGVHESLDPKATSSVDSDANAVGFQNTDIPAPAQVVVESTPVGSGRLLLNWP 907
A+ + G HE + A+ V SD N G QN+ +PAPAQV+VEST VGSG+LLLNW
Sbjct: 847 -ASVTTNANG-HEQPETNASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWR 904
Query: 908 EFWRAFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIVPGGATLETMTGQD 967
EFWRAF LDHNRADL+WNERTRQEL EAL+AEVH LDVEKERTEDI PG +E TGQ+
Sbjct: 905 EFWRAFGLDHNRADLIWNERTRQELIEALKAEVHNLDVEKERTEDISPG--DVEATTGQE 962
Query: 968 SVPQISWNYPEFSVSYPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAFFRALYHR 1027
+P+ISWNY EFSVSY SLSKEVCVGQYYLRLLLESG++G+AQDFPLRDPVAFFRALYHR
Sbjct: 963 IIPRISWNYSEFSVSYRSLSKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHR 1022
Query: 1028 FLCDADIGLTVDGAIPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQHYTT 1087
F CDAD+GLT+DGA+PDELG+S DWCDM RLDGFGGGGG+SVRELCARAMAIVYEQHY T
Sbjct: 1023 FQCDADMGLTIDGAVPDELGSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNT 1082
Query: 1088 IGPFEGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLANIEACVLVGGCVLAVDLLTVVH 1147
IGPFEGTAHIT L+DRT+DRALRHRLLLLLK L+KVL N+E CV+VGGCVLAVDLLTVVH
Sbjct: 1083 IGPFEGTAHITALIDRTNDRALRHRLLLLLKALVKVLLNVEGCVVVGGCVLAVDLLTVVH 1142
Query: 1148 ETSERTAIPLQSNLLAATAFMEPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDWTTRC 1207
E SERT IPLQSNL+AATAFMEP KEWM+IDK GA+VGPVEKD IR WSKK IDWTT+C
Sbjct: 1143 ENSERTPIPLQSNLIAATAFMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKC 1202
Query: 1208 WASGMLDWKKLRDIRELRWALAVRVPVLTPTQVGEAALAILHNMVSAHSDLDDAGEIVTP 1267
A GM DWKKLRDIRELRWA+AVRVPVLTP+QVG+AAL+ILH+MVSAHSDLDDAGEIVTP
Sbjct: 1203 RALGMSDWKKLRDIRELRWAVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTP 1262
Query: 1268 TPRVKWILSSSRCLPHIAQAMLSGEPSIVEAAAALLKAVVTRNPKAMIRLYSTGAFYFAL 1327
TPRVK ILSS+RCLPHIAQA+LSGEP IVEA AALLK VVTRN KAMIRLYSTGAFYFAL
Sbjct: 1263 TPRVKRILSSTRCLPHIAQALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFAL 1322
Query: 1328 AYPGSNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLERSGP 1387
AYPGSNLYSIAQLFSVTHVHQAFHGGEEA VSSSLPLAKRSVLGGLLPESLLYVLERSGP
Sbjct: 1323 AYPGSNLYSIAQLFSVTHVHQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGP 1382
Query: 1388 AAFSAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEYAPMPPVTY 1447
AAF+A MVSDSDTPEIIWTHKMRAENLI QVLQHLGD+PQKLSQHCHSLY+YAPMPPVTY
Sbjct: 1383 AAFAAGMVSDSDTPEIIWTHKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTY 1442
Query: 1448 PELKDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRRPMDLSEEEACK 1507
PEL+DEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTR+PMDLSE EACK
Sbjct: 1443 PELRDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACK 1502
Query: 1508 ILEISLDDVSSDDSHKSYS---SEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEG 1564
ILEISL++VSSDD +++ S +EE+SNISK+I+N+DEEKLKRQYRKLAM+YHPDKNPEG
Sbjct: 1503 ILEISLNNVSSDDLNRTASVELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEG 1562
Query: 1565 REKFLAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYPMLLN 1624
REKFLAVQKAYE LQATMQGLQGPQPWRLLLLLK QCILYRRYG VL PFKYAGYPMLL+
Sbjct: 1563 REKFLAVQKAYECLQATMQGLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLD 1622
Query: 1625 AVTVDEDDNNFLSSDRAPLLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSRCMCV 1684
AVTVD+DDNNFLS+DR+PLLVAASEL+ LTCA+SSLNGEELVRDGG+QLLSTLLSRCMCV
Sbjct: 1623 AVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCV 1682
Query: 1685 VQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDA 1744
VQ TT EP+A+IVTNVMRT SV+SQFESAR L+ L++DIVHCTELE VP AVDA
Sbjct: 1683 VQPTTSQHEPAAIIVTNVMRTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDA 1742
Query: 1745 ALQTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAKNMH 1804
ALQ+IA VSV ELQ LLKAGALW++LPLLLQYDSTAE+S++ ESHGVG S+QIAKN H
Sbjct: 1743 ALQSIAKVSVFPELQHGLLKAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEH 1802
Query: 1805 AVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLNTNLE 1864
A++A+QALSRL+GLC++ PYN AA L+ALLTPKLASLLKD++ K+LLSKLNTNLE
Sbjct: 1803 ALQASQALSRLTGLCADESLTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLE 1862
Query: 1865 SPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVYND 1924
+PEIIWNS+TR+ELL FVD+QRA Q PDGSYDLK++ F Y+ALSKE++VGNVYL+VYND
Sbjct: 1863 TPEIIWNSATRSELLNFVDEQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYND 1922
Query: 1925 QPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSK 1984
QPD EI+EPE+FC ALIDFIS LVH + + S+ Q +++D+ SS+
Sbjct: 1923 QPDSEISEPESFCNALIDFISSLVHTELPSVSEDQ----------NLIEDR----NSSND 1968
Query: 1985 TFELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNPNLA 2044
T EL S + S+ E + + + E+ +I +LQ GLT+LQN+LT P+LA
Sbjct: 1969 TPELQSSVAEPSLIEEHSDHQ----PSSEGMKNEECFLIDHLQLGLTALQNLLTKYPDLA 2024
Query: 2045 SIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQM 2104
S+FS+KE+LLPLFECFSV A ++IP+LCLNVLS LT A CLE MV+DGSSLLLLLQM
Sbjct: 2025 SVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRLTAYAPCLETMVSDGSSLLLLLQM 2084
Query: 2105 LHYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLL 2164
LH AP+ REG LHVLYALASTPELAWAAAKHGGVVYILELLLP Q+E PLQQRAAAASLL
Sbjct: 2085 LHSAPSFREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQKEIPLQQRAAAASLL 2144
Query: 2165 GKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASL 2224
GKLV QPMHGPRVAITL RFLPDGLVS+IRDGPGEAVV ALE+TTETPELVWTPAMAASL
Sbjct: 2145 GKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELVWTPAMAASL 2204
Query: 2225 SAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNP 2284
SAQI+TMASD+YREQ KG V++WDVPEQ++ QQEMRDEPQVGGIYVR FLKDPKFPLRNP
Sbjct: 2205 SAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLKDPKFPLRNP 2264
Query: 2285 KRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKL 2344
KRFLEGLLDQYLS++AATHY+ +DPELPLLLSAALVSLLRVHPALADH+G+LGYVPKL
Sbjct: 2265 KRFLEGLLDQYLSAMAATHYEQHPVDPELPLLLSAALVSLLRVHPALADHIGHLGYVPKL 2324
Query: 2345 VAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAS 2404
VAAVAYEGRRETMS+ EVK +D ES D S+ P QTPQERVRLSCLRVLHQLAAS
Sbjct: 2325 VAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCLRVLHQLAAS 2384
Query: 2405 TTCAEAMAATSTGTPQVVPILMKAIGWQGGSILALETLKRVVVAGNRARDALVAQGLKVG 2464
TTCAEAMAATS G QVVP+LMKAIGW GGSILALETLKRVVVAGNRARDALVAQGLKVG
Sbjct: 2385 TTCAEAMAATSAGNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDALVAQGLKVG 2444
Query: 2465 LVDVLLGLLDWRAGGRNGLSSQMKWNESEASIGRVLAIEV 2504
L++VLLGLLDWR GGR GLSS MKWNESEASIGRVLA+EV
Sbjct: 2445 LIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAVEV 2484
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Required for endosome formation, vacuolar protein sorting and determination of the embryo growth axis; necessary for the transport of proteins into protein storage vacuoles (PSVs). Participates to vesicle trafficking from the endosome to the central vacuole. Involved in the regulation of shoot phototropism and gravitropism, probably through the positioning of specialized amyloplasts (statoliths) in endodermal cells. Arabidopsis thaliana (taxid: 3702) |
| >sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo sapiens GN=DNAJC13 PE=1 SV=5 | Back alignment and function description |
|---|
| >sp|Q0K758|DNAJ_CUPNH Chaperone protein DnaJ OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1 | Back alignment and function description |
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| >sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops GN=DNAJA1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|A1KR91|DNAJ_NEIMF Chaperone protein DnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2526 | ||||||
| 225445342 | 2609 | PREDICTED: dnaJ homolog subfamily C memb | 0.979 | 0.948 | 0.851 | 0.0 | |
| 255549024 | 2581 | heat shock protein binding protein, puta | 0.973 | 0.952 | 0.845 | 0.0 | |
| 356513910 | 2589 | PREDICTED: dnaJ homolog subfamily C memb | 0.980 | 0.956 | 0.819 | 0.0 | |
| 356563087 | 2583 | PREDICTED: dnaJ homolog subfamily C memb | 0.978 | 0.957 | 0.824 | 0.0 | |
| 449464292 | 2550 | PREDICTED: dnaJ homolog subfamily C memb | 0.973 | 0.964 | 0.818 | 0.0 | |
| 449500231 | 2537 | PREDICTED: LOW QUALITY PROTEIN: dnaJ hom | 0.968 | 0.964 | 0.809 | 0.0 | |
| 297825923 | 2552 | hypothetical protein ARALYDRAFT_481564 [ | 0.979 | 0.969 | 0.770 | 0.0 | |
| 42569365 | 2554 | DNAJ heat shock N-terminal domain-contai | 0.971 | 0.961 | 0.772 | 0.0 | |
| 3426038 | 2535 | unknown protein [Arabidopsis thaliana] | 0.962 | 0.958 | 0.757 | 0.0 | |
| 125533055 | 2632 | hypothetical protein OsI_34763 [Oryza sa | 0.963 | 0.924 | 0.730 | 0.0 |
| >gi|225445342|ref|XP_002281542.1| PREDICTED: dnaJ homolog subfamily C member 13-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 4128 bits (10706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 2133/2505 (85%), Positives = 2300/2505 (91%), Gaps = 31/2505 (1%)
Query: 16 PEETEYLARYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIG 75
PEE EYLARY+VVKHSWRGRYKRILCIS + IITLDP+TL+VTNSY+VA+D+EGATPIIG
Sbjct: 33 PEEPEYLARYMVVKHSWRGRYKRILCISTSAIITLDPSTLSVTNSYDVATDYEGATPIIG 92
Query: 76 RDDNANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRIRWVRLNAVAEFPVLHLRRRN 135
RDDN+ EFNISVRTDGRGKFK KFSSRFRASILTELHR+RW R+ AVAEFPVLHLRRR
Sbjct: 93 RDDNSFEFNISVRTDGRGKFKGMKFSSRFRASILTELHRLRWNRIGAVAEFPVLHLRRRT 152
Query: 136 SEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKR-SETGGFVLCP 194
EWVP+K+KVTYVG+EL +L+SGDLRWCLDFRDM+SPAI+LLSDAYGK+ +E GGFVLCP
Sbjct: 153 GEWVPFKMKVTYVGLELIELKSGDLRWCLDFRDMNSPAIILLSDAYGKKNTEHGGFVLCP 212
Query: 195 LYGRKSKAFQAAPGTTNSAIVSSLTKTAKSMVGLSLSVDSSQPLSVAEYIKRRAKEAVGA 254
LYGRKSKAFQAA GT+ +AI+S+LTKTAKSMVGLSL+VDSSQ LSVAEYIKRRAKEAVGA
Sbjct: 213 LYGRKSKAFQAASGTSTTAIISNLTKTAKSMVGLSLAVDSSQSLSVAEYIKRRAKEAVGA 272
Query: 255 DETPCGGWSVTRLRSAAHGTLNVSGLSLGIGPKGGLGEHGGAVSRQLILTRVSLVERRPD 314
+ETPCGGWSVTRLRSAAHGTLNV GL LG+GPKGGLGE G AVSRQLIL++VSLVERRP
Sbjct: 273 EETPCGGWSVTRLRSAAHGTLNVPGLGLGVGPKGGLGEQGDAVSRQLILSKVSLVERRPA 332
Query: 315 NYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTEGH 374
NYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTEG
Sbjct: 333 NYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTEGQ 392
Query: 375 YPVPVLPRLTMPGHRIDPPCGVVHMQ-----VRKQRPVADMESTSMHLKHLAAVAKDAVA 429
VP+LPRLTMPGHRIDPPCG V +Q + +QRPV+D+ES +MHLKHLAA AKDAVA
Sbjct: 393 CAVPILPRLTMPGHRIDPPCGRVLLQFQQSPIGQQRPVSDVESATMHLKHLAAAAKDAVA 452
Query: 430 ESGQVSGSRAKLWRRIREFNACIPYSGVPPSVEVPEVTLMALITMLPSTPNLPPESPPLP 489
E G V GSRAKLWRRIRE NACIPY+GVPP+ EVPEVTLMALITMLP+TPNLPPESPPLP
Sbjct: 453 EGGSVPGSRAKLWRRIRELNACIPYTGVPPNSEVPEVTLMALITMLPATPNLPPESPPLP 512
Query: 490 PPSPKAAATVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIA 549
PPSPKAAATVMGF+ACLRRLL SR+AASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGL+A
Sbjct: 513 PPSPKAAATVMGFIACLRRLLASRSAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLVA 572
Query: 550 ILIGGGSGDTNMLTDSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVE 609
+LIGGG GDTN L D+KGE+HAT MHTKSVLF+ GY+I+LVNRL+PMSVSPLLSM+VVE
Sbjct: 573 VLIGGGPGDTNALADTKGERHATYMHTKSVLFAHHGYVIILVNRLKPMSVSPLLSMSVVE 632
Query: 610 VLETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVAVIMRTIAEEDA 669
VLE MIC+PH ETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVA+IMRTIAEEDA
Sbjct: 633 VLEAMICDPHGETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVALIMRTIAEEDA 692
Query: 670 IAAESMRDAALRDGALLRHLLHAFFLPAGERREVSRQLVALWADSYQPALDLLSRVLPPG 729
IAAESMRDAALRDGALLRHLLHAF+LPAGERREVSRQLVALWADSYQPAL+LLSRVLPPG
Sbjct: 693 IAAESMRDAALRDGALLRHLLHAFYLPAGERREVSRQLVALWADSYQPALELLSRVLPPG 752
Query: 730 LVAYLHTRSDGVLSEDA----NLEGSLTSRRQRRLLQQRKGRPG--RGIASQEHSVPYVN 783
LVAYLHTRSDGV+ EDA N EGSL SRRQRRLLQQR+GR G +GI SQ+HS+P VN
Sbjct: 753 LVAYLHTRSDGVVPEDAQNIPNQEGSLISRRQRRLLQQRRGRVGVGKGITSQDHSLPSVN 812
Query: 784 NVEANDPTRQKTSAFRGPGSHQTSNLDPSSGQASAFQSPAARSGENLVSDIPYMGFSQND 843
N +A DPTRQ ++AF+ S+ DP+SGQ A A +GENL +++ G Q D
Sbjct: 813 NSDAGDPTRQSSAAFKASDSYYKPAPDPTSGQVPAGHPSVAHTGENLTNELSSTGVPQVD 872
Query: 844 HPAVVATADSPLRGVHESLDPKATSSVDSDANAVGFQNTDIPAPAQVVVESTPVGSGRLL 903
+ A V ++D+ E+L+ A++SVDSD N FQN +PAPAQVVVE+TPVGSGRLL
Sbjct: 873 YSAAVVSSDALAMNTKEALESIASNSVDSDPNVANFQNAGLPAPAQVVVENTPVGSGRLL 932
Query: 904 LNWPEFWRAFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIVPGGATLETM 963
NWPEFWRAFSLDHNRADL+WNERTRQELREALQAEVHKLDVEKERTEDIVPG +T+E M
Sbjct: 933 CNWPEFWRAFSLDHNRADLIWNERTRQELREALQAEVHKLDVEKERTEDIVPGRSTVEIM 992
Query: 964 TGQDSVPQISWNYPEFSVSYPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAFFRA 1023
+GQD+VPQISWNY EFSV YPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAFFRA
Sbjct: 993 SGQDNVPQISWNYTEFSVGYPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAFFRA 1052
Query: 1024 LYHRFLCDADIGLTVDGAIPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQ 1083
LYHRFLCDADIGLTVDGA+PDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQ
Sbjct: 1053 LYHRFLCDADIGLTVDGAVPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQ 1112
Query: 1084 HYTTIGPFEGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLANIEACVLVGGCVLAVDLL 1143
HY IGPF+GTAHITVLLDRTDDRALRHRLLLLLKVLMKVL+N+EACVLVGGCVLAVD+L
Sbjct: 1113 HYKVIGPFDGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLSNVEACVLVGGCVLAVDML 1172
Query: 1144 TVVHETSERTAIPLQSNLLAATAFMEPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDW 1203
TVVHE SERTAIPLQSNL+AA+AFMEP KEWMF+DK+G QVGP+EKDAIRRFWSKK IDW
Sbjct: 1173 TVVHEASERTAIPLQSNLIAASAFMEPLKEWMFVDKEGVQVGPLEKDAIRRFWSKKGIDW 1232
Query: 1204 TTRCWASGMLDWKKLRDIRELRWALAVRVPVLTPTQVGEAALAILHNMVSAHSDLDDAGE 1263
TTRCWASGM DWK+LRDIRELRWALAVRVPVLT TQVGEAAL+ILH+MVSAHSDLDDAGE
Sbjct: 1233 TTRCWASGMSDWKRLRDIRELRWALAVRVPVLTSTQVGEAALSILHSMVSAHSDLDDAGE 1292
Query: 1264 IVTPTPRVKWILSSSRCLPHIAQAMLSGEPSIVEAAAALLKAVVTRNPKAMIRLYSTGAF 1323
IVTPTPRVK ILSS RCLPHIAQAML+GEPSIVE AAALLKAVVTRNPKAMIRLYSTGAF
Sbjct: 1293 IVTPTPRVKRILSSPRCLPHIAQAMLTGEPSIVEGAAALLKAVVTRNPKAMIRLYSTGAF 1352
Query: 1324 YFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLE 1383
YFAL+YPGSNL SIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLE
Sbjct: 1353 YFALSYPGSNLLSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLE 1412
Query: 1384 RSGPAAFSAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEYAPMP 1443
RSGPAAF+AAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLY+YAPMP
Sbjct: 1413 RSGPAAFAAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYDYAPMP 1472
Query: 1444 PVTYPELKDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRRPMDLSEE 1503
PVTYPEL+DEMWCHRYYLRNLCDEI+FPNWPIVEHVEFLQSLLVMWREELTR+PMDLSEE
Sbjct: 1473 PVTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEE 1532
Query: 1504 EACKILEISLDDVSSDDS---HKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDK 1560
EACKILEISL+DVS DD+ H S SE++++ISK+IENIDEEKLKRQYRKLAMKYHPDK
Sbjct: 1533 EACKILEISLEDVSGDDASNKHSSEISEDITSISKQIENIDEEKLKRQYRKLAMKYHPDK 1592
Query: 1561 NPEGREKFLAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYP 1620
NPEGREKFLAVQKAYERLQATMQGLQGPQ WRLLLLLKGQCILYRRYG VLEPFKYAGYP
Sbjct: 1593 NPEGREKFLAVQKAYERLQATMQGLQGPQLWRLLLLLKGQCILYRRYGHVLEPFKYAGYP 1652
Query: 1621 MLLNAVTVDEDDNNFLSSDRAPLLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSR 1680
MLLN VTVD+DDNNFLSSDRAPLLVAASEL+WLTCASSSLNGEELVRDGGIQLL+TLLSR
Sbjct: 1653 MLLNCVTVDKDDNNFLSSDRAPLLVAASELIWLTCASSSLNGEELVRDGGIQLLATLLSR 1712
Query: 1681 CMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPG 1740
CMCVVQ TTP+ EPSA+IVTNVMRTFSVLSQFESAR E+L+FSGLV DIVHCTELEL P
Sbjct: 1713 CMCVVQPTTPSSEPSAIIVTNVMRTFSVLSQFESARFEMLEFSGLVDDIVHCTELELAPA 1772
Query: 1741 AVDAALQTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIA 1800
AVDAALQTIA+VSVSSELQDALLKAG LW+LLPLLLQYDSTA++SD E+HGVGASVQIA
Sbjct: 1773 AVDAALQTIAYVSVSSELQDALLKAGVLWYLLPLLLQYDSTADESDATEAHGVGASVQIA 1832
Query: 1801 KNMHAVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLN 1860
KN+HAVRA+QALSRLSGLC++GIS P+N+AAA AL+ALLTPKLAS+LKDQ+PK+LLSKLN
Sbjct: 1833 KNLHAVRASQALSRLSGLCTDGISTPFNQAAADALKALLTPKLASMLKDQLPKDLLSKLN 1892
Query: 1861 TNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLR 1920
NLESPEIIWNSSTRAELLKFVDQQRASQ PDGSY++KDS+ F Y+ALSKELYVGNVYLR
Sbjct: 1893 ANLESPEIIWNSSTRAELLKFVDQQRASQGPDGSYEVKDSHCFAYKALSKELYVGNVYLR 1952
Query: 1921 VYNDQPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDP 1980
VYNDQPDFEI+EPEAFCVAL+ FIS+LVHNQ A SD QG +LDG
Sbjct: 1953 VYNDQPDFEISEPEAFCVALLGFISFLVHNQGAAVSDDQGTLNLDG-------------- 1998
Query: 1981 SSSKTFELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSN 2040
SS T E+ +D D S+ + V+D+SL VSD KVT E+S ++KNLQFGLTSLQN+L ++
Sbjct: 1999 SSFNTSEVQTDTADGSVTVQNVSDDSLVVSDGKVTTDENSELVKNLQFGLTSLQNLLKNS 2058
Query: 2041 PNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLL 2100
PNLASIFSTKE+LLPLFECFSV A ++NIPQLCL+VLSLLT CA CLEAMVADGSSLLL
Sbjct: 2059 PNLASIFSTKEQLLPLFECFSVSVASETNIPQLCLSVLSLLTMCAPCLEAMVADGSSLLL 2118
Query: 2101 LLQMLHYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAA 2160
LLQMLH AP CREG LHVLYALASTPELAWAAAKHGGVVYILELLLP Q+E PLQQRAAA
Sbjct: 2119 LLQMLHSAPNCREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQEEIPLQQRAAA 2178
Query: 2161 ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAM 2220
ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAM
Sbjct: 2179 ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAM 2238
Query: 2221 AASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFP 2280
AASLSAQI+TMASDLYREQMKGRVVDWDVPEQAS QQEMRDEPQVGGIYVRLFLKDPKFP
Sbjct: 2239 AASLSAQIATMASDLYREQMKGRVVDWDVPEQASGQQEMRDEPQVGGIYVRLFLKDPKFP 2298
Query: 2281 LRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGY 2340
LRNPKRFLEGLLDQYLSSIAATHYD QA+DPELPLLLSAALVSLLRVHPALADHVGYLGY
Sbjct: 2299 LRNPKRFLEGLLDQYLSSIAATHYDMQAVDPELPLLLSAALVSLLRVHPALADHVGYLGY 2358
Query: 2341 VPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQP-VQTPQERVRLSCLRVLH 2399
VPKLVAAVAYEGRRETM+T E+KNGN D YE+++GS QP QTPQERVRLSCLRVLH
Sbjct: 2359 VPKLVAAVAYEGRRETMATGEMKNGNY-TDGAYETEEGSTQPNAQTPQERVRLSCLRVLH 2417
Query: 2400 QLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSILALETLKRVVVAGNRARDALVAQ 2459
QLAASTTCAEAMAATS GTPQVVP+LMKAIGWQGGSILALETLKRVVVAGNRARDALVAQ
Sbjct: 2418 QLAASTTCAEAMAATSVGTPQVVPLLMKAIGWQGGSILALETLKRVVVAGNRARDALVAQ 2477
Query: 2460 GLKVGLVDVLLGLLDWRAGGRNGLSSQMKWNESEASIGRVLAIEV 2504
GLKVGLV+VLLGLLDWRAGGRNGL +QMKWNESEASIGRVLAIEV
Sbjct: 2478 GLKVGLVEVLLGLLDWRAGGRNGLCTQMKWNESEASIGRVLAIEV 2522
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549024|ref|XP_002515568.1| heat shock protein binding protein, putative [Ricinus communis] gi|223545512|gb|EEF47017.1| heat shock protein binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356513910|ref|XP_003525651.1| PREDICTED: dnaJ homolog subfamily C member 13-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356563087|ref|XP_003549797.1| PREDICTED: dnaJ homolog subfamily C member 13-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449464292|ref|XP_004149863.1| PREDICTED: dnaJ homolog subfamily C member 13-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449500231|ref|XP_004161042.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 13-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297825923|ref|XP_002880844.1| hypothetical protein ARALYDRAFT_481564 [Arabidopsis lyrata subsp. lyrata] gi|297326683|gb|EFH57103.1| hypothetical protein ARALYDRAFT_481564 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|42569365|ref|NP_180257.3| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|449061825|sp|F4IVL6.1|GRV2_ARATH RecName: Full=DnaJ homolog subfamily C GRV2; AltName: Full=Protein GRAVITROPISM DEFECTIVE 2; AltName: Full=Protein GREEN FLUORESCENT SEED 2; AltName: Full=Protein KATAMARI2 gi|330252810|gb|AEC07904.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|3426038|gb|AAC32237.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|125533055|gb|EAY79620.1| hypothetical protein OsI_34763 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2526 | ||||||
| TAIR|locus:2039543 | 2554 | GRV2 "GRAVITROPISM DEFECTIVE 2 | 0.973 | 0.962 | 0.696 | 0.0 | |
| FB|FBgn0015477 | 2408 | Rme-8 "Receptor mediated endoc | 0.169 | 0.178 | 0.321 | 9.8e-175 | |
| WB|WBGene00004378 | 2279 | rme-8 [Caenorhabditis elegans | 0.170 | 0.188 | 0.310 | 3.1e-174 | |
| DICTYBASE|DDB_G0286293 | 2592 | dnajc13 "DnaJ (Hsp40) homolog, | 0.236 | 0.230 | 0.307 | 4e-144 | |
| UNIPROTKB|A6QM13 | 250 | DNAJA1 "DnaJ homolog subfamily | 0.015 | 0.16 | 0.6 | 5.7e-05 | |
| UNIPROTKB|C9JDE6 | 211 | DNAJA4 "DnaJ homolog subfamily | 0.014 | 0.170 | 0.611 | 0.00014 | |
| UNIPROTKB|F5H170 | 219 | DNAJA4 "DnaJ homolog subfamily | 0.014 | 0.164 | 0.611 | 0.00017 | |
| UNIPROTKB|Q5E954 | 397 | DNAJA1 "DnaJ homolog subfamily | 0.015 | 0.100 | 0.6 | 0.00017 | |
| UNIPROTKB|E2RM09 | 397 | LOC474739 "Uncharacterized pro | 0.015 | 0.100 | 0.6 | 0.00017 | |
| UNIPROTKB|P31689 | 397 | DNAJA1 "DnaJ homolog subfamily | 0.015 | 0.100 | 0.6 | 0.00017 |
| TAIR|locus:2039543 GRV2 "GRAVITROPISM DEFECTIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 8667 (3056.0 bits), Expect = 0., P = 0.
Identities = 1739/2496 (69%), Positives = 1949/2496 (78%)
Query: 17 EETEYLARYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGR 76
EE EYLARYLVVKHSWRGRYKRILCIS+ I+TLDPNTLAVTNSY+ S+F+GA+P++GR
Sbjct: 18 EEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTNSYDTGSNFDGASPLVGR 77
Query: 77 DDNAN----EFNISVRTDXXXXXXXXXXXXXXXXXILTELHRIRWVRLNAVAEFPVLHLR 132
D+N EF ++VRTD ILTEL+R+RW ++ VAEF VLHLR
Sbjct: 78 DENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRLRWNQIRPVAEFQVLHLR 137
Query: 133 RRNSEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRS-ETGGFV 191
RRN+EWVPYKLK+T+VG+EL D +SG+ RW LDFRDM SPAI+LLSDAY +S ++ GFV
Sbjct: 138 RRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAIILLSDAYRTKSADSAGFV 197
Query: 192 LCPLYGRKSKAFQAAPGTTNSAIVSSLTKTAKSMVGLSLSVDSSQPLSVAEYIKRRAKEA 251
LCP+YGRKSKAF+AAPGTTNS+IV+SL KTAKSMVG+ LSVD SQ L+V+EY+ RRAKEA
Sbjct: 198 LCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDDSQLLTVSEYMTRRAKEA 257
Query: 252 VGADETPCGGWSVTRLRSAAHGTLNVSGLSLGIGPKGGLGEHGGAVSRQLILTRVSLVER 311
VGA+ETP G WSVTRLRSAAHGTLN+ GLSL IGPKGGLGEHG AV+ QLILT+ SLVER
Sbjct: 258 VGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHGDAVALQLILTKASLVER 317
Query: 312 RPDNYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQT 371
R DNYE VIVRPLS+VSSLVRFAEEPQMFAIEF+DGCP+ VYAS SRD+LLAA+ D LQT
Sbjct: 318 RIDNYEVVIVRPLSSVSSLVRFAEEPQMFAIEFSDGCPVLVYASISRDNLLAAILDTLQT 377
Query: 372 EGHYPVPVLPRLTMPGHRIDPPCGVVHMQVRKQRPVADMESTSMHLKHLAAVAKDAVAES 431
EGH P+PVLPRLTMPGHRIDPPCG V + Q VAD+E+ S+HLKHLAA AKDAVAE
Sbjct: 378 EGHCPIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCSLHLKHLAAAAKDAVAEG 437
Query: 432 GQVSGSRAKLWRRIREFNACIXXXXXXXXXXXXXXTLMALITMXXXXXXXXXXXXXXXXX 491
G V G RA+LWRRIREFNACI TLMALITM
Sbjct: 438 GSVPGCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPSTPNLPVDAPPLPPP 497
Query: 492 XXKAAATVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSXXXXXXXXXXXXXX 551
KAAATV+GFV CLRRLL+SR+AASH+MSFPAAV RIMGLLRNGS
Sbjct: 498 SPKAAATVIGFVTCLRRLLSSRSAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASL 557
Query: 552 XXXXSGDTNMLTDSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVL 611
S D + DS+GE+HAT+MHTKSVLF+QQGY+ +LVNRL+PMSVSPL SMA+VEV
Sbjct: 558 IGGWSADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVF 617
Query: 612 ETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVAVIMRTIAEEDAIA 671
E M+C+PH ETTQYTVFVELLRQ+A LRRRLFALF HPAESVRET+AVIMRTIAEEDAIA
Sbjct: 618 EAMVCDPHGETTQYTVFVELLRQIAALRRRLFALFAHPAESVRETIAVIMRTIAEEDAIA 677
Query: 672 AESMRDAALRDGXXXXXXXXXXXXPAGERREVSRQLVALWADSYQPALDLLSRVLPPGLV 731
AESMRDAALRDG PA ERREVSRQLVALWADSYQPALDLLSRVLPPGLV
Sbjct: 678 AESMRDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLV 737
Query: 732 AYLHTRSDGVLSEDANLEGSLTSXXXXXXXXXXXXXXXXXIASQEHSVPYVNNVEANDPT 791
AYLHTR D V+ +D + EGS T+ + +Q+ +P NNVEA D
Sbjct: 738 AYLHTRPDDVV-DDTDQEGSSTNRRQKRLLQQRRGRIAKGMGAQDIPLPPGNNVEAGDAA 796
Query: 792 RQKTSAFRGPGSHQTSNLDPSSGQASAFQSPAARSGENLVSDIPYMGFSQNDHPAVVATA 851
+ ++ P + Q D SS +AS +P A + + S I G SQN +PA A+
Sbjct: 797 KHMSANASVPDNFQRRAAD-SSSEAS---NPQASAFPGVDSTIA--GVSQNGYPAF-ASV 849
Query: 852 DSPLRGVHESLDPKATSSVDSDANAVGFQNTDIPAPAQVVVESTPVGSGRLLLNWPEFWR 911
+ G HE + A+ V SD N G QN+ +PAPAQV+VEST VGSG+LLLNW EFWR
Sbjct: 850 TTNANG-HEQPETNASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWR 908
Query: 912 AFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIVPGGATLETMTGQDSVPQ 971
AF LDHNRADL+WNERTRQEL EAL+AEVH LDVEKERTEDI PG +E TGQ+ +P+
Sbjct: 909 AFGLDHNRADLIWNERTRQELIEALKAEVHNLDVEKERTEDISPGD--VEATTGQEIIPR 966
Query: 972 ISWNYPEFSVSYPSLSKEVCVGQYYXXXXXXXXXXXXAQDFPLRDPVAFFRALYHRFLCD 1031
ISWNY EFSVSY SLSKEVCVGQYY AQDFPLRDPVAFFRALYHRF CD
Sbjct: 967 ISWNYSEFSVSYRSLSKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCD 1026
Query: 1032 ADIGLTVDGAIPDELGASDDWCDMGRLDXXXXXXXSSVRELCARAMAIVYEQHYTTIGPF 1091
AD+GLT+DGA+PDELG+S DWCDM RLD +SVRELCARAMAIVYEQHY TIGPF
Sbjct: 1027 ADMGLTIDGAVPDELGSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNTIGPF 1086
Query: 1092 EGTAHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIEACVLVGGCVLAVDLLTVVHETSE 1151
EGTAHI N+E CV+VGGCVLAVDLLTVVHE SE
Sbjct: 1087 EGTAHITALIDRTNDRALRHRLLLLLKALVKVLLNVEGCVVVGGCVLAVDLLTVVHENSE 1146
Query: 1152 RTAIPLQSNLLAATAFMEPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDWTTRCWASG 1211
RT IPLQSNL+AATAFMEP KEWM+IDK GA+VGPVEKD IR WSKK IDWTT+C A G
Sbjct: 1147 RTPIPLQSNLIAATAFMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALG 1206
Query: 1212 MLDWKKLRDIRELRWALAVRVPVLTPTQVGEAALAILHNMVSAHSDLDDAGEIVTPTPRV 1271
M DWKKLRDIRELRWA+AVRVPVLTP+QVG+AAL+ILH+MVSAHSDLDDAGEIVTPTPRV
Sbjct: 1207 MSDWKKLRDIRELRWAVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRV 1266
Query: 1272 KWILSSSRCLPHIAQAMLSGEPSIVEXXXXXXXXXXTRNPKAMIRLYSTGAFYFALAYPG 1331
K ILSS+RCLPHIAQA+LSGEP IVE TRN KAMIRLYSTGAFYFALAYPG
Sbjct: 1267 KRILSSTRCLPHIAQALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPG 1326
Query: 1332 SNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFS 1391
SNLYSIAQLFSVTHVHQAFHGGEEA VSSSLPLAKRSVLGGLLPESLLYVLERSGPAAF+
Sbjct: 1327 SNLYSIAQLFSVTHVHQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFA 1386
Query: 1392 AAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEYAPMPPVTYPELK 1451
A MVSDSDTPEIIWTHKMRAENLI QVLQHLGD+PQKLSQHCHSLY+YAPMPPVTYPEL+
Sbjct: 1387 AGMVSDSDTPEIIWTHKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELR 1446
Query: 1452 DEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRRPMDLSEEEACKILEI 1511
DEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTR+PMDLSE EACKILEI
Sbjct: 1447 DEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEI 1506
Query: 1512 XXXXXXXXXXXXXXXXE---EMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKF 1568
E E+SNISK+I+N+DEEKLKRQYRKLAM+YHPDKNPEGREKF
Sbjct: 1507 SLNNVSSDDLNRTASVELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKF 1566
Query: 1569 LAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYPMLLNAVTV 1628
LAVQKAYE LQATMQGLQGPQPWRLLLLLK QCILYRRYG VL PFKYAGYPMLL+AVTV
Sbjct: 1567 LAVQKAYECLQATMQGLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTV 1626
Query: 1629 DEDDNNFLSSDRAPLLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSRCMCVVQKT 1688
D+DDNNFLS+DR+PLLVAASEL+ LTCA+SSLNGEELVRDGG+QLLSTLLSRCMCVVQ T
Sbjct: 1627 DKDDNNFLSNDRSPLLVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPT 1686
Query: 1689 TPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDAALQT 1748
T EP+A+IVTNVMRT SV+SQFESAR L+ L++DIVHCTELE VP AVDAALQ+
Sbjct: 1687 TSQHEPAAIIVTNVMRTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQS 1746
Query: 1749 IAHVSVSSELQDXXXXXXXXXXXXXXXXQYDSTAEKSDTNESHGVGASVQIAKNMHAVRA 1808
IA VSV ELQ QYDSTAE+S++ ESHGVG S+QIAKN HA++A
Sbjct: 1747 IAKVSVFPELQHGLLKAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQA 1806
Query: 1809 AQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLNTNLESPEI 1868
+QALSRL+GLC++ PYN AA L+ALLTPKLASLLKD++ K+LLSKLNTNLE+PEI
Sbjct: 1807 SQALSRLTGLCADESLTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEI 1866
Query: 1869 IWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVYNDQPDF 1928
IWNS+TR+ELL FVD+QRA Q PDGSYDLK++ F Y+ALSKE++VGNVYL+VYNDQPD
Sbjct: 1867 IWNSATRSELLNFVDEQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDS 1926
Query: 1929 EITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSKTFEL 1988
EI+EPE+FC ALIDFIS LVH + + S+ Q +++D+ SS+ T EL
Sbjct: 1927 EISEPESFCNALIDFISSLVHTELPSVSEDQN----------LIEDR----NSSNDTPEL 1972
Query: 1989 PSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNPNLASIFS 2048
S + S+ E +D + K E+ +I +LQ GLT+LQN+LT P+LAS+FS
Sbjct: 1973 QSSVAEPSLIEEH-SDHQPSSEGMK---NEECFLIDHLQLGLTALQNLLTKYPDLASVFS 2028
Query: 2049 TKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGXXXXXXXQMLHYA 2108
+KE+LLPLFECFSV A ++IP+LCLNVLS LT A CLE MV+DG QMLH A
Sbjct: 2029 SKERLLPLFECFSVAIASKTDIPKLCLNVLSRLTAYAPCLETMVSDGSSLLLLLQMLHSA 2088
Query: 2109 PACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLV 2168
P+ REG LHVLYALASTPELAWAAAKHGGVVYILELLLP Q+E PLQQRAAAASLLGKLV
Sbjct: 2089 PSFREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQKEIPLQQRAAAASLLGKLV 2148
Query: 2169 GQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQI 2228
QPMHGPRVAITL RFLPDGLVS+IRDGPGEAVV ALE+TTETPELVWTPAMAASLSAQI
Sbjct: 2149 AQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELVWTPAMAASLSAQI 2208
Query: 2229 STMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFL 2288
+TMASD+YREQ KG V++WDVPEQ++ QQEMRDEPQVGGIYVR FLKDPKFPLRNPKRFL
Sbjct: 2209 ATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLKDPKFPLRNPKRFL 2268
Query: 2289 EGLLDQYLSSIAATHYDTQAIDPEXXXXXXXXXXXXXRVHPALADHVGYLGYVPKLVAAV 2348
EGLLDQYLS++AATHY+ +DPE RVHPALADH+G+LGYVPKLVAAV
Sbjct: 2269 EGLLDQYLSAMAATHYEQHPVDPELPLLLSAALVSLLRVHPALADHIGHLGYVPKLVAAV 2328
Query: 2349 AYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLXXXXXXX 2408
AYEGRRETMS+ EVK +D ES D S+ P QTPQERVRLSCLRVLHQL
Sbjct: 2329 AYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCLRVLHQLAASTTCA 2388
Query: 2409 XXXXXXXXGTPQVVPILMKAIGWQGGSILALETLKRVVVAGNRARDALVAQXXXXXXXXX 2468
G QVVP+LMKAIGW GGSILALETLKRVVVAGNRARDALVAQ
Sbjct: 2389 EAMAATSAGNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDALVAQGLKVGLIEV 2448
Query: 2469 XXXXXXWRAGGRNGLSSQMKWNESEASIGRVLAIEV 2504
WR GGR GLSS MKWNESEASIGRVLA+EV
Sbjct: 2449 LLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAVEV 2484
|
|
| FB|FBgn0015477 Rme-8 "Receptor mediated endocytosis 8" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00004378 rme-8 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0286293 dnajc13 "DnaJ (Hsp40) homolog, subfamily C, member 13" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A6QM13 DNAJA1 "DnaJ homolog subfamily A member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|C9JDE6 DNAJA4 "DnaJ homolog subfamily A member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F5H170 DNAJA4 "DnaJ homolog subfamily A member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5E954 DNAJA1 "DnaJ homolog subfamily A member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RM09 LOC474739 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P31689 DNAJA1 "DnaJ homolog subfamily A member 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| F4IVL6 | GRV2_ARATH | No assigned EC number | 0.772 | 0.9718 | 0.9612 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | GRV2 | GRV2 (GRAVITROPISM DEFECTIVE 2); binding / heat shock protein binding; GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. (2554 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | AT4G35870 | • | 0.851 | ||||||||
 | MAG1 | • | 0.786 | ||||||||
 | SGR2 | • | 0.710 | ||||||||
 | VSR1 | • | • | 0.702 | |||||||
 | VAM3 | • | 0.679 | ||||||||
 | SGR4 | • | 0.679 | ||||||||
 | MUR3 | • | 0.679 | ||||||||
 | AT2G30290 | • | 0.641 | ||||||||
 | DELTA-VPE | • | 0.625 | ||||||||
 | AT4G20110 | • | 0.599 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 2526 | |||
| smart00271 | 60 | smart00271, DnaJ, DnaJ molecular chaperone homolog | 2e-12 | |
| pfam00226 | 63 | pfam00226, DnaJ, DnaJ domain | 2e-12 | |
| cd06257 | 55 | cd06257, DnaJ, DnaJ domain or J-domain | 4e-12 | |
| PRK10767 | 371 | PRK10767, PRK10767, chaperone protein DnaJ; Provis | 4e-11 | |
| COG0484 | 371 | COG0484, DnaJ, DnaJ-class molecular chaperone with | 4e-10 | |
| TIGR02349 | 354 | TIGR02349, DnaJ_bact, chaperone protein DnaJ | 4e-10 | |
| PRK14294 | 366 | PRK14294, PRK14294, chaperone protein DnaJ; Provis | 4e-08 | |
| PRK14281 | 397 | PRK14281, PRK14281, chaperone protein DnaJ; Provis | 5e-08 | |
| pfam14237 | 45 | pfam14237, DUF4339, Domain of unknown function (DU | 1e-07 | |
| PRK14297 | 380 | PRK14297, PRK14297, chaperone protein DnaJ; Provis | 7e-07 | |
| PRK14277 | 386 | PRK14277, PRK14277, chaperone protein DnaJ; Provis | 8e-07 | |
| PRK14276 | 380 | PRK14276, PRK14276, chaperone protein DnaJ; Provis | 1e-06 | |
| PRK14291 | 382 | PRK14291, PRK14291, chaperone protein DnaJ; Provis | 1e-06 | |
| PRK14301 | 373 | PRK14301, PRK14301, chaperone protein DnaJ; Provis | 1e-06 | |
| PRK14293 | 374 | PRK14293, PRK14293, chaperone protein DnaJ; Provis | 2e-06 | |
| PRK14284 | 391 | PRK14284, PRK14284, chaperone protein DnaJ; Provis | 3e-06 | |
| PRK14283 | 378 | PRK14283, PRK14283, chaperone protein DnaJ; Provis | 4e-06 | |
| PRK14298 | 377 | PRK14298, PRK14298, chaperone protein DnaJ; Provis | 6e-06 | |
| PRK14280 | 376 | PRK14280, PRK14280, chaperone protein DnaJ; Provis | 2e-05 | |
| PRK14282 | 369 | PRK14282, PRK14282, chaperone protein DnaJ; Provis | 3e-05 | |
| PTZ00037 | 421 | PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov | 3e-05 | |
| COG2214 | 237 | COG2214, CbpA, DnaJ-class molecular chaperone [Pos | 3e-05 | |
| PRK14299 | 291 | PRK14299, PRK14299, chaperone protein DnaJ; Provis | 3e-05 | |
| PRK14289 | 386 | PRK14289, PRK14289, chaperone protein DnaJ; Provis | 4e-05 | |
| PRK14290 | 365 | PRK14290, PRK14290, chaperone protein DnaJ; Provis | 5e-05 | |
| PRK14278 | 378 | PRK14278, PRK14278, chaperone protein DnaJ; Provis | 6e-05 | |
| PRK14286 | 372 | PRK14286, PRK14286, chaperone protein DnaJ; Provis | 7e-05 | |
| PRK14288 | 369 | PRK14288, PRK14288, chaperone protein DnaJ; Provis | 8e-05 | |
| PRK14292 | 371 | PRK14292, PRK14292, chaperone protein DnaJ; Provis | 2e-04 | |
| PRK14287 | 371 | PRK14287, PRK14287, chaperone protein DnaJ; Provis | 2e-04 | |
| PRK14279 | 392 | PRK14279, PRK14279, chaperone protein DnaJ; Provis | 0.001 | |
| PRK14285 | 365 | PRK14285, PRK14285, chaperone protein DnaJ; Provis | 0.002 | |
| PRK14296 | 372 | PRK14296, PRK14296, chaperone protein DnaJ; Provis | 0.002 | |
| TIGR03835 | 871 | TIGR03835, termin_org_DnaJ, terminal organelle ass | 0.003 |
| >gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 2e-12
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 1538 ENIDEEKLKRQYRKLAMKYHPDKNP----EGREKFLAVQKAYERLQ 1579
+ +++K+ YRKLA+KYHPDKNP E EKF + +AYE L
Sbjct: 11 RDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLS 56
|
Length = 60 |
| >gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain | Back alignment and domain information |
|---|
| >gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain | Back alignment and domain information |
|---|
| >gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ | Back alignment and domain information |
|---|
| >gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|206405 pfam14237, DUF4339, Domain of unknown function (DUF4339) | Back alignment and domain information |
|---|
| >gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2526 | |||
| KOG1789 | 2235 | consensus Endocytosis protein RME-8, contains DnaJ | 100.0 | |
| KOG1789 | 2235 | consensus Endocytosis protein RME-8, contains DnaJ | 100.0 | |
| COG0484 | 371 | DnaJ DnaJ-class molecular chaperone with C-termina | 99.59 | |
| KOG0717 | 508 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.57 | |
| KOG0713 | 336 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.47 | |
| KOG0712 | 337 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.39 | |
| PRK14296 | 372 | chaperone protein DnaJ; Provisional | 99.29 | |
| PRK14288 | 369 | chaperone protein DnaJ; Provisional | 99.29 | |
| PTZ00037 | 421 | DnaJ_C chaperone protein; Provisional | 99.26 | |
| PRK14286 | 372 | chaperone protein DnaJ; Provisional | 99.22 | |
| PRK14287 | 371 | chaperone protein DnaJ; Provisional | 99.2 | |
| PRK14279 | 392 | chaperone protein DnaJ; Provisional | 99.2 | |
| PRK14276 | 380 | chaperone protein DnaJ; Provisional | 99.17 | |
| PRK14282 | 369 | chaperone protein DnaJ; Provisional | 99.17 | |
| PF14237 | 45 | DUF4339: Domain of unknown function (DUF4339) | 99.14 | |
| PRK14283 | 378 | chaperone protein DnaJ; Provisional | 99.14 | |
| PRK14280 | 376 | chaperone protein DnaJ; Provisional | 99.14 | |
| PRK14299 | 291 | chaperone protein DnaJ; Provisional | 99.14 | |
| PRK14298 | 377 | chaperone protein DnaJ; Provisional | 99.14 | |
| PRK14294 | 366 | chaperone protein DnaJ; Provisional | 99.13 | |
| PRK14297 | 380 | chaperone protein DnaJ; Provisional | 99.13 | |
| PRK14285 | 365 | chaperone protein DnaJ; Provisional | 99.13 | |
| PRK14301 | 373 | chaperone protein DnaJ; Provisional | 99.13 | |
| PRK14277 | 386 | chaperone protein DnaJ; Provisional | 99.12 | |
| PRK14278 | 378 | chaperone protein DnaJ; Provisional | 99.11 | |
| KOG0716 | 279 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.1 | |
| PRK14284 | 391 | chaperone protein DnaJ; Provisional | 99.09 | |
| PRK14291 | 382 | chaperone protein DnaJ; Provisional | 99.08 | |
| PRK10767 | 371 | chaperone protein DnaJ; Provisional | 99.08 | |
| KOG0718 | 546 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.07 | |
| PRK14281 | 397 | chaperone protein DnaJ; Provisional | 99.06 | |
| PRK14295 | 389 | chaperone protein DnaJ; Provisional | 99.05 | |
| PRK14289 | 386 | chaperone protein DnaJ; Provisional | 99.0 | |
| PRK14290 | 365 | chaperone protein DnaJ; Provisional | 98.99 | |
| PRK10266 | 306 | curved DNA-binding protein CbpA; Provisional | 98.98 | |
| TIGR02349 | 354 | DnaJ_bact chaperone protein DnaJ. This model repre | 98.97 | |
| PRK14292 | 371 | chaperone protein DnaJ; Provisional | 98.97 | |
| PRK14300 | 372 | chaperone protein DnaJ; Provisional | 98.97 | |
| KOG0691 | 296 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.96 | |
| PHA03102 | 153 | Small T antigen; Reviewed | 98.95 | |
| PTZ00341 | 1136 | Ring-infected erythrocyte surface antigen; Provisi | 98.95 | |
| KOG0719 | 264 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.94 | |
| KOG0715 | 288 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.94 | |
| PRK14293 | 374 | chaperone protein DnaJ; Provisional | 98.92 | |
| cd06257 | 55 | DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho | 98.88 | |
| smart00271 | 60 | DnaJ DnaJ molecular chaperone homology domain. | 98.86 | |
| PF00226 | 64 | DnaJ: DnaJ domain; InterPro: IPR001623 The prokary | 98.86 | |
| PTZ00100 | 116 | DnaJ chaperone protein; Provisional | 98.81 | |
| KOG0721 | 230 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.79 | |
| PRK09430 | 267 | djlA Dna-J like membrane chaperone protein; Provis | 98.76 | |
| TIGR03835 | 871 | termin_org_DnaJ terminal organelle assembly protei | 98.66 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.63 | |
| COG2214 | 237 | CbpA DnaJ-class molecular chaperone [Posttranslati | 98.57 | |
| KOG0722 | 329 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.52 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 98.5 | |
| KOG0720 | 490 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.34 | |
| PRK05014 | 171 | hscB co-chaperone HscB; Provisional | 98.32 | |
| PHA02624 | 647 | large T antigen; Provisional | 98.31 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.29 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.27 | |
| PRK01356 | 166 | hscB co-chaperone HscB; Provisional | 98.25 | |
| KOG0714 | 306 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.23 | |
| PRK03578 | 176 | hscB co-chaperone HscB; Provisional | 98.17 | |
| COG5407 | 610 | SEC63 Preprotein translocase subunit Sec63 [Intrac | 98.15 | |
| PRK00294 | 173 | hscB co-chaperone HscB; Provisional | 98.13 | |
| TIGR00714 | 157 | hscB Fe-S protein assembly co-chaperone HscB. This | 97.71 | |
| COG5269 | 379 | ZUO1 Ribosome-associated chaperone zuotin [Transla | 97.63 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 97.62 | |
| KOG1150 | 250 | consensus Predicted molecular chaperone (DnaJ supe | 97.43 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 97.1 | |
| PRK01773 | 173 | hscB co-chaperone HscB; Provisional | 96.93 | |
| KOG0723 | 112 | consensus Molecular chaperone (DnaJ superfamily) [ | 96.55 | |
| KOG0568 | 342 | consensus Molecular chaperone (DnaJ superfamily) [ | 96.12 | |
| PF02213 | 57 | GYF: GYF domain; InterPro: IPR003169 The glycine-t | 96.12 | |
| cd00072 | 57 | GYF GYF domain: contains conserved Gly-Tyr-Phe res | 95.61 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 94.65 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 93.56 | |
| smart00444 | 56 | GYF Contains conserved Gly-Tyr-Phe residues. Proli | 92.41 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 92.32 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 91.64 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 91.43 | |
| COG1076 | 174 | DjlA DnaJ-domain-containing proteins 1 [Posttransl | 90.87 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 90.38 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 88.71 | |
| PF03656 | 127 | Pam16: Pam16; InterPro: IPR005341 The Pam16 protei | 87.38 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 85.27 | |
| KOG0431 | 453 | consensus Auxilin-like protein and related protein | 83.87 | |
| PF06017 | 199 | Myosin_TH1: Myosin tail; InterPro: IPR010926 These | 83.61 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 83.6 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 83.2 | |
| PF06371 | 187 | Drf_GBD: Diaphanous GTPase-binding Domain; InterPr | 81.31 | |
| KOG2160 | 342 | consensus Armadillo/beta-catenin-like repeat-conta | 80.02 |
| >KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=4630.47 Aligned_cols=2157 Identities=33% Similarity=0.521 Sum_probs=1976.2
Q ss_pred CCCCCCCceEEEEEEEeecccccceEEEEeecCeeeeeCCCCcccccccccccccccccccccCCCC---CCcEEEEEee
Q 000056 13 HPPPEETEYLARYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDN---ANEFNISVRT 89 (2526)
Q Consensus 13 ~~~~~~~~~~a~y~vtKhSWrgkYkRif~Ig~~~i~T~nP~tlevTN~W~y~~d~~~i~p~~~~~~~---~~eF~i~~rk 89 (2526)
++.++||+|+|||+|||||||||||||||||+.+|+||||+|++|||||.| +||++++|..+.+++ ++||+|++|+
T Consensus 2 ~~~~~e~~~~a~ylv~khsw~g~ykri~~i~s~~i~t~~pntl~itn~~~~-~~f~~~~pl~~~~~~~s~~~e~~i~vr~ 80 (2235)
T KOG1789|consen 2 AQFCSENRDIACYLVTKHSWKGKYKRVFSIGTLAITTYNPNTLEITNQWLY-EDFLSVKPLRNGGSNDSKQDEYKIHVRN 80 (2235)
T ss_pred CcccccchhhhheeeeecccccceeEEEEecccceEeecCcceeeechhhh-hcccccCcccCCCCccccCceeEEEEec
Confidence 578999999999999999999999999999999999999999999999999 899999998766543 3599999999
Q ss_pred cCCCcccceeeechhhhHHHHHHHHhhhhhcccccCCCcceecccCCcccceEEEEeeceEEEecCCCCceEEEeeccCC
Q 000056 90 DGRGKFKAFKFSSRFRASILTELHRIRWVRLNAVAEFPVLHLRRRNSEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDM 169 (2526)
Q Consensus 90 ~~~~K~~~mkFss~~Ra~lLT~l~r~r~~~~~~~~~f~~~~~~~~k~~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~ 169 (2526)
+ ||++.|||||+||++|||+++|+ +..++++.|.+++++++|.+|+|.+|.||-. ++|.-+|.+|||+|
T Consensus 81 ~--gk~~~m~fss~~~~~ilt~~l~~--~~~~~~~~f~~l~~~~~~~~w~~~~~~it~~-------~~~~~~~~~d~r~~ 149 (2235)
T KOG1789|consen 81 R--GKNNDMRFSSDYTTDILTHCLQF--STKFADKNFEPLTVTAFKQSWSDRRIPVTLR-------ANASCLEQIDNRGV 149 (2235)
T ss_pred C--CccccccccccchHHHHHHHHHh--hhhccccccceEEEeecccccccccceeEEE-------ecCcchheecccCc
Confidence 7 47999999999999999999655 4788999999999999999999777776643 45556666666666
Q ss_pred CccceeeeccccCCCC-CCCcEEEeeccCCCccccccCCCCChHHHHHHHHHHHhhhcCeEEEecCCCCCCHHHHHHHHH
Q 000056 170 DSPAIVLLSDAYGKRS-ETGGFVLCPLYGRKSKAFQAAPGTTNSAIVSSLTKTAKSMVGLSLSVDSSQPLSVAEYIKRRA 248 (2526)
Q Consensus 170 ~~~~i~~l~d~~~~~~-~~ggfvl~~~~g~~~r~~l~~~~~~~~~ii~~i~~~A~~~~G~~i~~~~~~~it~~~~~~~R~ 248 (2526)
.+++|..++|.|-+|. +.-||++||+||+++|.|.+ + .++++|+++|.+.|+.++|+-+.++++ .++.++|...|+
T Consensus 150 ~~~~~~~~~~~~~~k~~d~~g~~~~~~~~~~~~~~~a-~-s~n~~~v~~~~~~a~~~igi~~~i~~~-ql~~~~~~~tr~ 226 (2235)
T KOG1789|consen 150 VVQSYPYKNIRSIGKVSDCPGGFVVDVGEHRRRHMFA-S-SNNEELVKEIRRLASDNIGIIVPIAKE-QLTLEDFMRTRL 226 (2235)
T ss_pred cccceeeechhhhccccCCCCeeEecccchhhhhHhh-c-cCcHHHHHHHHHHhhhceeEEEEcchh-hhhhHHHHHHHH
Confidence 6666666666553333 55677789999998876554 4 489999999999999999999999985 789999999999
Q ss_pred hhhcCCC-CCcccceeEEEEeecccCcccccCcccccCCCCCCCCCCCcceEEEEeccceeeeecCCccceEEeecccce
Q 000056 249 KEAVGAD-ETPCGGWSVTRLRSAAHGTLNVSGLSLGIGPKGGLGEHGGAVSRQLILTRVSLVERRPDNYEAVIVRPLSAV 327 (2526)
Q Consensus 249 ~~~~~~~-~ts~~ef~V~k~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~v~R~L~Lt~~~lvERdp~tY~vv~~rpL~~i 327 (2526)
|+.+.++ +||++||+|+||+ |+..-||+|+||||++||||||.+||+||++|||++|
T Consensus 227 ~~~~~~~e~t~~~~~~is~~~----------------------~~~~mpv~~~l~ls~~~~ier~~~~y~vi~~~pl~~i 284 (2235)
T KOG1789|consen 227 GLCSRDEELTSYAEFKISKIT----------------------RRNEMPVRRLLCLSETCIIERDLATYAVICATPLKHI 284 (2235)
T ss_pred hhhhcccccCCcceEEeeeec----------------------ccccccHHHHHHHhHhHHhhhhccceeEEEecchhhH
Confidence 9987754 6999999999994 1356799999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEEEecCCccceeeccCchhHHHHHHHHHHHhhCCCCeeeecccCCCCCccCCCCcccccccccCCCC
Q 000056 328 SSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTEGHYPVPVLPRLTMPGHRIDPPCGVVHMQVRKQRPV 407 (2526)
Q Consensus 328 ~aLVR~~~dpQ~f~IE~~dG~~~r~Y~s~~RD~LLAslLD~~rasGn~~V~V~~~~t~rg~r~~p~~~~~~~~~~p~~~~ 407 (2526)
.||||+++|||+|+|||.||| .+.|..+.||-.+++++|++|++||+.|.|.....
T Consensus 285 ~~lvr~~~~pq~f~ie~~~g~-~~~~~~~~~~l~~~s~~~~i~~~~~~~~~i~gh~~----------------------- 340 (2235)
T KOG1789|consen 285 VCLVRSEKDPQQFIVEYENGD-GRAYVAAERDLILASLLDGIRASGNNEVFVCGHRF----------------------- 340 (2235)
T ss_pred HHHHhcccCchheEEEecCCC-cceeecccchhhhhhccCccCCCCCceEEEecchh-----------------------
Confidence 999999999999999999998 99999999999999999999999999999976333
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhcCCCCCchHHHHHHHHHhccCCCCCCCCCCcccchHHHHHHHHhCCCCCCCCCCCCC
Q 000056 408 ADMESTSMHLKHLAAVAKDAVAESGQVSGSRAKLWRRIREFNACIPYSGVPPSVEVPEVTLMALITMLPSTPNLPPESPP 487 (2526)
Q Consensus 408 ~d~E~es~~Lk~l~~~~~~~~~~~g~~p~~~~~~~~~v~~FNAnIpysGl~~~~~~~~~~~~al~~~l~~~~~~~~~~~~ 487 (2526)
.|-|.-+.|+++|++.+|+++..||..|+.++++|++||||||||||||++++ +.+|+.+|++..+++.+++++.+.+|
T Consensus 341 ~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~r~~~~ir~fna~ipysg~~~~-~~~e~~~~~~~~~~~~~~~~~v~~~~ 419 (2235)
T KOG1789|consen 341 ERNLRVIPFSTNLDEDSESQCMKHIIAPPPGLRRCDLIRRFNANVPYSGLRFS-KSHEGFFSENKGKVIVNAIEAVLMEN 419 (2235)
T ss_pred hhcceeccchhhhhhhhHHHHHcCCCCCCccchHHHHHHHhccCCCccCCccc-cCccchHHhhccccccCccccccCCC
Confidence 44455566777777777778888888888889999999999999999999999 78899999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHhcHHHHHHhhccchhHHHHHHhhccCCcchHHHH----HHHHHHHhcCCCCCCcccc
Q 000056 488 LPPPSPKAAATVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEA----AGLIAILIGGGSGDTNMLT 563 (2526)
Q Consensus 488 ~~~~~~~~a~~~~~~~~aLrRL~as~~gf~~~~~~p~~~~~v~~~L~~~~~~v~~~a----~~~l~~l~~~~~~~~~~~~ 563 (2526)
+||++++.++++++|+||||||++||.||++||++|+.+.+|+.+++|+.++++.++ +.+||.+|.|||+. +
T Consensus 420 ~~~~~~~~~~~~~~~~~clrrl~~s~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 495 (2235)
T KOG1789|consen 420 YTKDDKEYKHKTEAQLQCLRRLFASKSGFQAFTEVNGVREKLGSLVVRVLSWKSESIDHSTVEALCALMYPMHDQ----Y 495 (2235)
T ss_pred CCCCChHHhhHHHHHHHHHHHHHhcchhhHHHhhchHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhcCccccc----h
Confidence 999999999999999999999999999999999999999999999999988876554 67788888888888 9
Q ss_pred CchhhhhhhhcccchhcccchhhHHHHHHhhcCCCChhHHHHHHHHHHhhhccCCCCCCCChHHHHHHHHHHHhhhhHHH
Q 000056 564 DSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVAGLRRRLF 643 (2526)
Q Consensus 564 d~~~e~~~~~~~nKs~ll~~~~~~~~L~~~l~~~~~~aLv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va~~gr~lf 643 (2526)
|+|.|||++++|.||.+|..+++.-+++++++ +||+|++|+|++||||++|.||||||.|++|+.+|++|+.+||+||
T Consensus 496 ~~r~e~~~~~~~~~s~~f~~~~~~~i~~~~~~--s~~~l~~~~~~~~~~~~vc~p~~ett~~~~f~~~l~~i~~~~r~~f 573 (2235)
T KOG1789|consen 496 ELRIEQLNKQSLMSSPKFVENLLDLIVLHVDR--STGWLVIASMLNFLTFSVCSPYSETTAGDTFDHILKLVSLRGRSFF 573 (2235)
T ss_pred hhHHHHHHHHHhhccHHHHHhchheEEEeecc--cccHHHHHHHHHHHHhcccCCCcccccccHHHHHHHHHHHhhhHHH
Confidence 99999988888888887777777777777777 6999999999999999999999999999999999999999999999
Q ss_pred HhhCCChhhHHhHHHHHHHHHHhhcHHHHHHHHHHHHhhcHHHHHHHHHhcCCCCchhHHHHHHHHHHhcCChhHHhhhh
Q 000056 644 ALFGHPAESVRETVAVIMRTIAEEDAIAAESMRDAALRDGALLRHLLHAFFLPAGERREVSRQLVALWADSYQPALDLLS 723 (2526)
Q Consensus 644 ~Lf~hp~~~i~~~aglimrai~Ee~~~~a~~mq~~AL~eGall~HL~~Alf~~~~~~r~lsr~LV~lW~~~~~~a~~LL~ 723 (2526)
+|||||+|+|+||+|||||+|||||+..+++||++||+|||+|+||..||..+..++||||||||+||+++||+|.|||.
T Consensus 574 ~lf~~p~~si~~~~~~imr~i~ee~~i~~~sm~~~al~~ga~l~hl~~~~~l~~~~~~~~s~~li~lw~~~~q~a~dll~ 653 (2235)
T KOG1789|consen 574 RLFQCPSMTIVKGAGMVMRAIIEEADVETKSMQMLALSEGAFLTHLFMSLLLRVMTNKQLSGHLISLWIADNQQANDLLI 653 (2235)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhccchHHHHHHHHHhhhhhhhhHHhhhHHHHHhhccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhHhhhcccCCCCCCccchhcccchhHHHHHHHHHhhcCCCCCCcccccccCCcccccccCCcccccccccCCCCC
Q 000056 724 RVLPPGLVAYLHTRSDGVLSEDANLEGSLTSRRQRRLLQQRKGRPGRGIASQEHSVPYVNNVEANDPTRQKTSAFRGPGS 803 (2526)
Q Consensus 724 RilP~GLl~yL~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 803 (2526)
|++||||++||+|++++++.|.+. +. .+.|-+. ++.++.+.+ +| +.
T Consensus 654 r~lp~gl~~y~~s~~~~~v~~~d~-~~---~~~n~da--------a~~~s~~~~-~~---------------------~~ 699 (2235)
T KOG1789|consen 654 RCLPRGLLNYMESDEKVPVNEKDL-LI---VRNNFDA--------ASNETKQNA-MK---------------------EK 699 (2235)
T ss_pred HhCCHHHHHhhhcCCCCCcCchhh-cc---cccCchh--------hhhhhhhcc-ch---------------------hh
Confidence 999999999999998888877654 22 1222221 121111000 00 00
Q ss_pred CcccCCCCCCCCcccCCCccccccCccccCCCCCCCCCCCCcccccccCCCccCccccCCCCcCcCCCccccccCCCCCC
Q 000056 804 HQTSNLDPSSGQASAFQSPAARSGENLVSDIPYMGFSQNDHPAVVATADSPLRGVHESLDPKATSSVDSDANAVGFQNTD 883 (2526)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (2526)
. +++.+.+ .+++|.+. ++|+. ++..
T Consensus 700 f--------------------------------------~~~~~sa---------~~g~~~~i---~~~~~-----~~~~ 724 (2235)
T KOG1789|consen 700 F--------------------------------------DQLRVTA---------EAGLERFV---QHWDL-----EQKL 724 (2235)
T ss_pred h--------------------------------------cCccccc---------cccHHHHH---HHhhh-----hhhc
Confidence 0 0000000 11222222 23332 5556
Q ss_pred CCCCcceeecccccCCCcccCCHHHHHHHHhcccCCCccccCHHHHHHHHHHHHHHHhhhhHHhhhcccCCCCCCccccc
Q 000056 884 IPAPAQVVVESTPVGSGRLLLNWPEFWRAFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIVPGGATLETM 963 (2526)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~nW~~f~~~~~~Dh~~pdlIWn~~tR~ELr~aL~~Ei~~f~~~~~~~~~~~~g~~~~~~~ 963 (2526)
.+.|.|++.+++.+++++...||+.||.+| ++|||||++||+|||+||.+|.+.+..+||++.+|
T Consensus 725 ~~~p~~vi~e~~~~~~~~~~l~~r~~~~~~-----~adliwne~tr~e~~~a~~~e~~~l~~eke~~~~~---------- 789 (2235)
T KOG1789|consen 725 NFLPKRVIDEKQQQRQQPVVLRKRRNRVRP-----NADLIWNEKTREEFRHAMDTETRALISEKEQAPTG---------- 789 (2235)
T ss_pred ccccHHHhhHHhhhccCCeeeehhhhhcCc-----CcccccchhhHHHHHHHHHHHHHHhhhhhhhCCCC----------
Confidence 789999999999999999999999999999 89999999999999999999999999999987552
Q ss_pred cCCCCCCccccccCcceeeccCcccceeeccchhhhhhccCCCCCCCCCCCCCHHHHHHHHHHHHHhcccccccccCCCC
Q 000056 964 TGQDSVPQISWNYPEFSVSYPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAFFRALYHRFLCDADIGLTVDGAIP 1043 (2526)
Q Consensus 964 ~~~~~~~~i~WN~~eF~V~Y~sL~~Ev~vg~yYLRlLle~~~~~~~~~~~I~~p~~Ff~~ly~rfL~~~~~~~~~~~~~~ 1043 (2526)
..|+|||.||+|+|+||.+|+|||+||||+||++.+. .++||+||++||++|||||+|+.|.
T Consensus 790 ------~pi~wn~sef~i~y~sl~~ei~ig~yylrlll~~~~~---~~~p~~~p~~ff~~~yhrf~~~~~~--------- 851 (2235)
T KOG1789|consen 790 ------LPIAWNHTEFQIRYPSLLEEIKIGDYYLRLLLIEADE---NATPIHNPLEFFNNVYHRFLLSTKV--------- 851 (2235)
T ss_pred ------CccccccceeeeechhhHhhhhHhHHHHHHHHHhccC---CCCcccCHHHHHHHHHHHHhccccc---------
Confidence 3599999999999999999999999999999999988 4899999999999999999998864
Q ss_pred CcCCCCCccCcCCCCcCCCCCCCchhHHHHHHHHHHHHHhhhcccCCCCChhHHHHHHhhcCCHHHHHHHHHHHHHHHhh
Q 000056 1044 DELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQHYTTIGPFEGTAHITVLLDRTDDRALRHRLLLLLKVLMKV 1123 (2526)
Q Consensus 1044 ~~l~~s~d~~~~~~~~~~~~~~~~~~r~lcL~am~ivY~r~~~~ig~f~~~~y~~~Ll~~~~d~~~R~~Lll~~~~L~~~ 1123 (2526)
+|||||+|||+|+|+|||.+||||.|++|++.|+++|.||.+||||++++.+|.++
T Consensus 852 ------------------------~~~~lc~ramai~y~~h~~tig~f~~s~~~~~~~~~~~~~~~r~~l~lll~~l~~~ 907 (2235)
T KOG1789|consen 852 ------------------------DMKCLCLRAMAITYSRHHMTIGAFQDSKYFVEMLQKCINPLERDHLVLLLSKLALN 907 (2235)
T ss_pred ------------------------cHHHHHHHHHHHHHHHhcccccccCccHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Confidence 29999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHhCCchHHHHHHHhhhhccCCCccccccchhhcccccCCcceeEeecCCCcccccccHHHHHHHHhcCCcCc
Q 000056 1124 LANIEACVLVGGCVLAVDLLTVVHETSERTAIPLQSNLLAATAFMEPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDW 1203 (2526)
Q Consensus 1124 ~~N~~~~v~~~G~~llvdLltlah~~~~r~~~~~q~n~i~a~~~~~~~KeWyY~~~~g~q~GP~s~~eLk~l~~~g~I~~ 1203 (2526)
+.||++||-.||+.++|||++++|+|++|+.||+|+|+|+|+++|+++|||||.+++|+++||++++.|+.+|.++.|++
T Consensus 908 ~~nv~~~ii~~~~~l~vdl~~~~h~~~~r~~i~~qsn~i~asa~~~~~~ew~y~dk~~~~vgp~~~~~~~sl~s~k~i~~ 987 (2235)
T KOG1789|consen 908 KDNVRELIISNILPLLVDLCVLAHLHVQRAKVQNQTNVIEASAEQMAEEEWYYHDKDAKQVGPLSFEKMKSLYTEKTIFE 987 (2235)
T ss_pred hccchhheeecchHHHHHHHHHHHHhhhccCCccchhHHHhhhhhcCchhheeecCCccccCchhHHHHHHHhcccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccCcchhhchhhhhHHHHhhccCCcCChhhHHHHHHHHHHHhhccccCCCCCCCccccCcchhhhccCCCchHH
Q 000056 1204 TTRCWASGMLDWKKLRDIRELRWALAVRVPVLTPTQVGEAALAILHNMVSAHSDLDDAGEIVTPTPRVKWILSSSRCLPH 1283 (2526)
Q Consensus 1204 ~T~vWa~GM~~W~~l~~ipeLrw~la~g~p~l~~~~l~~~~L~iL~~~~~~~p~~d~~g~ii~P~Prvkr~Ls~~~~Lph 1283 (2526)
+|.||+.||++|+++++||||||+++...|+|++++++.+||+||+.||++||++|++|+||+|+|+|||+||++.||||
T Consensus 988 ~s~~~a~gm~~w~~l~~i~~~rw~v~~~ipv~~~s~~~~~~l~~L~~Mc~~fpsrD~~~~IvrP~P~VKR~LS~~~CLPH 1067 (2235)
T KOG1789|consen 988 KSQIWAAGMDKWMSLAAVPQFRWTVCQQIPVMNFTDLSVLCLDTLLQMCEFFPSRDSHDCIVRPMPSVKRQLSEPVCLPH 1067 (2235)
T ss_pred HHHHHHhhhhHHHhhhhhhhhhhhhhhcccccCHHHHHHHHHHHHHHHHhhCCCcccCCCeeccChHHHHHhcCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCchHHHHHHHHHHHHHhhChHHHHHHHhhhhhhhhhhcCCCChhhHHHHhhhhhhhhcccCCccccccCCcc
Q 000056 1284 IAQAMLSGEPSIVEAAAALLKAVVTRNPKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLP 1363 (2526)
Q Consensus 1284 lvQlLLt~~p~lve~~~~LL~~l~~~n~~~~~~Ly~tG~f~f~L~y~gsn~l~ia~lL~~~H~~Qa~~~~~~~~~ss~~~ 1363 (2526)
|+|+||||+|.|||+++.||+.+|+|||. |+|||++|||||+|||+|||++|||+||++||++|||++++ +++.+
T Consensus 1068 I~QlLLt~eP~iVE~vA~LLy~vmqdNp~-lpRLYlsGvFyFilmY~GSNvlpiArfl~yTH~kQAF~st~----~~~~~ 1142 (2235)
T KOG1789|consen 1068 IVQLLLTYEPQIVERVALLLYLVMQDNPF-LPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQAFRSTL----PQFEG 1142 (2235)
T ss_pred HHHHHhcCChhHHHHHHHHHHHHHhcCch-hHHHHhhchhheeeeeCCCchhhHHHHHHHHHHHHHHHhcc----ccccc
Confidence 99999999999999999999999999995 99999999999999999999999999999999999999765 57889
Q ss_pred hhhhhhhcCCCcHHHHHHHHhcCHHHHHHHhccCCCCcccccchhhhhHHHHHHHHHHhcCcccccccccccccccCCCC
Q 000056 1364 LAKRSVLGGLLPESLLYVLERSGPAAFSAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEYAPMP 1443 (2526)
Q Consensus 1364 ~~~rSvL~~lLPe~lv~~Le~~gp~~fa~~l~g~~dtPevIWn~~MR~~~Li~~i~~hl~df~~rL~~~~~alY~~~p~p 1443 (2526)
+.+|||||.+|||+|++|||+|||++|+++|+||+||||+|||++||+ +||++|.+|++||++||++|+|++|+|||||
T Consensus 1143 ~~qRSvLG~lLPEa~~~yLE~ygPekFae~flgefDTPEiIW~~~MRr-~lIe~ia~HLaDf~~rL~sn~raLYqYcPiP 1221 (2235)
T KOG1789|consen 1143 QRQRSVLGTLLPEAATFYLEQYGPEKFAEVFLGEFDTPEIIWNTAMRR-HLIERIAVHLADFSHRLTSNVRALYQYCPIP 1221 (2235)
T ss_pred HHHHHHHhhhcHHHHHHHHHhhChHHHHHHHhccCCChHHHHHHHHHH-HHHHHHHHHHhccCHhHHHhHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCcccchhhhhhhhHHHHHHhhhhccCCCCChhhhHHHHHHHHHHHHHHhhcCCCCCChHHHHHHhcccccCCCCCCccc
Q 000056 1444 PVTYPELKDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRRPMDLSEEEACKILEISLDDVSSDDSHK 1523 (2526)
Q Consensus 1444 ~i~Y~eL~~El~C~~yYLr~lcd~~rfP~wpi~dP~~fL~sll~~wr~el~~~~~~~s~~~ay~iLgv~~~~~~~~~~~~ 1523 (2526)
+|.||||++|||||.|||||+||+++||||||.||+.||++++.+|++|++|+|+.||+++||+||+++.+..+
T Consensus 1222 ~i~YPeL~~ElfCh~YYLr~LCD~~rFPdWPI~dpV~fL~~~L~~W~~ElekKP~~mS~d~A~eiL~i~l~n~~------ 1295 (2235)
T KOG1789|consen 1222 LIDYPELAQELFCHVYYLRHLCDKQRFPDWPIRDPVPFLRCCLATWYNELEKKPATMSVDLAREILSVDLTNEE------ 1295 (2235)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhccccCCCCcccCchHHHHHHHHHHHHHHhcCCCccchHHHHHHhccccCCCC------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999964321
Q ss_pred cccchhccccccccCCCCHHHHHHHHHHHHHHHCCCCCCchHHHHHHHHHHHHHhhc-cccCCCCCChhhHHhhhhhhcc
Q 000056 1524 SYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQA-TMQGLQGPQPWRLLLLLKGQCI 1602 (2526)
Q Consensus 1524 ~~~~~~~~~~s~~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd-~~~r~~~p~~~~~~liLr~qr~ 1602 (2526)
.-+.++|||+|||||+||||||||+|+|+|.+||+|||.|+. .....+||+||++.++|++|++
T Consensus 1296 ---------------hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~~~ta~~~~GPdP~riiL~LKaQsI 1360 (2235)
T KOG1789|consen 1296 ---------------HDKPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLSSETANNSGGPDPHRIVLCLKAQSI 1360 (2235)
T ss_pred ---------------cccHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCCCChhHhhHHHHhHHH
Confidence 113389999999999999999999999999999999999995 4567899999999999999999
Q ss_pred cccccCCccCCCccCccccccccccccCCCCCCcccCchhHHHHHHHHHhhhcccCCCchhhHHHhcCHHHHHHHHHHhh
Q 000056 1603 LYRRYGDVLEPFKYAGYPMLLNAVTVDEDDNNFLSSDRAPLLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSRCM 1682 (2526)
Q Consensus 1603 ~Ydr~g~~l~py~y~Gy~~Ll~~i~~~~dd~~ffs~~~~~ll~~A~El~~~Tv~~S~lNaeeL~re~G~~~L~~~lsrC~ 1682 (2526)
+|.|||+++.||||+||+||+++|+++++|+.|||..++|++.+|.||+.+||+||+||||||+||||+++|.++|+|||
T Consensus 1361 Ly~Ry~~~L~PyKYAGYPMLi~tiT~e~~D~~lfSk~~~PLL~AA~ELa~~T~~~SaLNaEELrRdnGle~L~tafSRCv 1440 (2235)
T KOG1789|consen 1361 LYSRYSQELSPYKYAGYPMLIKTITLEAKDEALFSKGGGPLLSAAIELANYTLISSALNAEELRRDNGLEALVTAFSRCV 1440 (2235)
T ss_pred HHHHhhhhcCccccCcchhhhhhhhhcccchhhhcCCCCcchHHHHHHHHHHHhhhhcCHHHHhhcccHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCccceeehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhHHHHHHHHHHHhhCCHHHHHHH
Q 000056 1683 CVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDAALQTIAHVSVSSELQDAL 1762 (2526)
Q Consensus 1683 ~vl~~~s~~~~~~~~v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l~~aALe~v~~~a~~~elq~~i 1762 (2526)
+|++++|+|+||+++||+|+||||+|++||++||+++.|+|+|++|||||+++...|+++.+|+|||+.|+++.+||.++
T Consensus 1441 ~Vvt~~s~p~dmav~vc~~v~~c~SVaaQFE~cR~~~~EmPSiI~Dl~r~l~f~~vPr~~~aa~qci~~~aVd~~LQ~~L 1520 (2235)
T KOG1789|consen 1441 PVVTMSSLPDDMAVRVCIHVCDCFSVAAQFEACRQRLMEMPSIIGDLTRLLQFSNLPRLSTAAAQCIRAMAVDTLLQFQL 1520 (2235)
T ss_pred eeeccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhccccHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHhhcCCCcccccCccccccccccHHHHHHHHHHHHHHHHHHhhCcCCCCCCCCccHHHHHHHHHhchHH
Q 000056 1763 LKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAKNMHAVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPK 1842 (2526)
Q Consensus 1763 ~~~GVLw~LL~lLf~YD~Tlees~le~~~~~~~~~qivkn~lAk~a~~aL~~L~g~~~d~~~~P~n~~v~~~L~klLpP~ 1842 (2526)
+++|+|||||++||+||||+||++++++|+ +|+|+++|.||+.|+.||+||+|++.|+..+|.|+.++..|..+|||+
T Consensus 1521 fqAG~LWYlLp~Lf~YDyTlEESg~q~Se~--~n~Q~~aNslA~~s~~ALSRL~G~~AdE~~TP~N~T~~~sL~alLTPy 1598 (2235)
T KOG1789|consen 1521 FQAGVLWYLLPHLFHYDYTLEESGVQHSED--SNKQSLANSLARSSCEALSRLAGFRADEENTPDNDTVQASLRALLTPY 1598 (2235)
T ss_pred HHhhhHHHHHHHHhcccccccccCcccccc--chHHHHHHHHHHHHHHHHHHHhccccccccCCCChhHHHHHHHhccHH
Confidence 999999999999999999999999999873 479999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccChHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhccCCCCCcccccccccccccccCCcEEeeEEEeee
Q 000056 1843 LASLLKDQIPKNLLSKLNTNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVY 1922 (2526)
Q Consensus 1843 l~~~L~d~~p~~~L~~LnSn~EnPeLIWnn~tRaEL~e~Le~q~~~~~~~~~w~l~~~~~f~Y~~l~~ELvVGGVYLRly 1922 (2526)
+++.|++...+++|++||||.||||+||||+||+||++|++.|++.+.++|.+|...+.+|.|+.|++||+||+||||+|
T Consensus 1599 iAr~Lk~e~~~~iLk~LNsN~E~Py~IWNn~TRaELLeFve~Qracq~~~G~~D~~yg~eF~Ys~h~KEliVG~ifirVY 1678 (2235)
T KOG1789|consen 1599 IARCLKLETNDMVLKTLNSNMENPYMIWNNGTRAELLEFVERQRACQTSNGPTDELYGAEFEYSVHKKELIVGDIFIRVY 1678 (2235)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCceeeecCccHHHHHHHHHHHHhccCCCCCchhhccceeeehhhccceeeeeEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHHHhhcccCCCCcccccccccccchhhhhccccCCCCCCccccCCCCcccCccccccc
Q 000056 1923 NDQPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSKTFELPSDATDSSMNERKV 2002 (2526)
Q Consensus 1923 neqP~~~Lr~Pk~Fl~~LLdfl~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~l 2002 (2526)
|+||+|.|..||.|+.+|+|||..+.+...+...|.. .++..-+++.. +++..
T Consensus 1679 NeqPtf~l~ePk~Fa~~LlDyI~S~~~~l~~~~~~~~---------------------~s~d~ie~~~~-V~sE~----- 1731 (2235)
T KOG1789|consen 1679 NEQPTFALHEPKKFAIDLLDYIKSHSAELTGAPKPKA---------------------ISDDLIEIDWG-VGSEA----- 1731 (2235)
T ss_pred cCCCchhhcCcHHHHHHHHHHHHHhHHHhcCCCCccc---------------------cccchhhhhcc-cchhh-----
Confidence 9999999999999999999999999988764321110 00111111110 11100
Q ss_pred cccchhcccccccCcchHHHHHHHHHHHHHHHHHHhhCccchhhccccCChhhhhcccCC--CCCCCCChhhHHHHHHHH
Q 000056 2003 NDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSV--PFAPDSNIPQLCLNVLSL 2080 (2526)
Q Consensus 2003 ~~~s~~~s~~~~~~~~d~e~l~~l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~--~~~~~~~vq~~aL~VL~~ 2080 (2526)
.|... .. -.+++|+|+||+||++.||+++..+.+...+.++|.|+.. ..+..+.+|++||+|++.
T Consensus 1732 --------HgD~l---Ps--~~~v~m~LtAL~Nli~~nPdlasvfgSe~~lig~F~l~~~~lr~~~~~~iq~LaL~Vi~~ 1798 (2235)
T KOG1789|consen 1732 --------HGDSL---PT--ETKVLMTLTALANLVSANPDLASVFGSEILLIGNFPLLITYLRCRKHPKLQILALQVILL 1798 (2235)
T ss_pred --------hcCCC---Ch--HHHHHHHHHHHHHHHhhCcchhhhccchhhhhcccHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 00100 01 1268999999999999999999999999999999998843 334567899999999999
Q ss_pred hcCChhHHHHHHhhcchHHHHHHHHhhCcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHH
Q 000056 2081 LTTCASCLEAMVADGSSLLLLLQMLHYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAA 2160 (2526)
Q Consensus 2081 ls~n~~CVeaiA~~~~vl~~Ll~lL~~~p~~~~~vL~~L~aL~s~t~lVkqal~~GgvlyLL~LL~~s~e~~~~~~R~~a 2160 (2526)
+|+|++||+.|+.+. ++..|+.+||+.|++++.+|++||+|+|+++++|+|++|||+.|+|++||++ +.+|+|+++
T Consensus 1799 ~Tan~~Cv~~~a~~~-vL~~LL~lLHS~PS~R~~vL~vLYAL~S~~~i~keA~~hg~l~yil~~~c~~---~~~QqRAqa 1874 (2235)
T KOG1789|consen 1799 ATANKECVTDLATCN-VLTTLLTLLHSQPSMRARVLDVLYALSSNGQIGKEALEHGGLMYILSILCLT---NSDQQRAQA 1874 (2235)
T ss_pred HhcccHHHHHHHhhh-HHHHHHHHHhcChHHHHHHHHHHHHHhcCcHHHHHHHhcCchhhhhHHHhcc---CcHHHHHHH
Confidence 999999999999876 8999999999999999999999999999999999999999999999999986 489999999
Q ss_pred HHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHh
Q 000056 2161 ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQM 2240 (2526)
Q Consensus 2161 A~lL~kM~aDklhGPrV~~~L~KfLP~~fvdamrdsP~~a~v~~fds~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~ 2240 (2526)
|++|+||.+||+|||||+++|.||||.+|+|+|||+| ||+||+||+||||||||||+.||++++.+|.+|+.++|++|+
T Consensus 1875 AeLlaKl~Adkl~GPrV~ITL~kFLP~~f~d~~RD~P-EAaVH~fE~T~EnPELiWn~~~r~kvS~~i~tM~~~~y~~QQ 1953 (2235)
T KOG1789|consen 1875 AELLAKLQADKLTGPRVTITLIKFLPEIFADSLRDSP-EAAVHMFESTSENPELIWNEVTRQKVSGIIDTMVGKLYEQQQ 1953 (2235)
T ss_pred HHHHHHhhhccccCCceeeehHHhchHHHHHHHhcCH-HHHHHHHhccCCCcccccCHhHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999 788999999999999999999999999999999999999999
Q ss_pred cCCcccccCCcccccccccCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHH
Q 000056 2241 KGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAA 2320 (2526)
Q Consensus 2241 ~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A 2320 (2526)
+||.+.|++||++.+++|+.+|+.|||||+|.|+++|+|+|||||+||++|||+++++|++++++++ .++++|.|
T Consensus 1954 k~p~~~W~~PEqsAg~~Ea~~E~aVGG~~~R~Fi~~P~f~LR~Pk~FL~~LLek~lelm~~~~peqh-----~l~lLt~A 2028 (2235)
T KOG1789|consen 1954 KDPTVKWNTPEQSAGTSEADKECAVGGSINREFVVGPGFNLRHPKLFLTELLEKVLELMSRPTPEQH-----ELDLLTKA 2028 (2235)
T ss_pred cCCcccccCchhhcchhhhccCcccchhhhHHHhhCCCCcccCHHHHHHHHHHHHHHHhcCCCcccc-----hhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988765 56899999
Q ss_pred HHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCCccccCcCCCCCCCCCCCChhhhhhhhHHHHHHH
Q 000056 2321 LVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQ 2400 (2526)
Q Consensus 2321 lv~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vlh~ 2400 (2526)
+|+|+++||+|+||||+|||+||++.+|+++|. .+++|||||||+
T Consensus 2029 ~V~L~r~hP~LADqip~LGylPK~~~Am~~~n~-----------------------------------s~P~SaiRVlH~ 2073 (2235)
T KOG1789|consen 2029 FVELVRHHPNLADQLPSLGYLPKFCTAMCLQNT-----------------------------------SAPRSAIRVLHE 2073 (2235)
T ss_pred HHHHHHhCcchhhhCCCccchHHHHHHHHhcCC-----------------------------------cCcHHHHHHHHH
Confidence 999999999999999999999999999999873 245999999999
Q ss_pred hhCChhHHHHHhhcCCCCCcchHHHHHHhhccCchHhHHHHHHHHHhcCCccchHHHHHHHhhCcHHHHHHhcccccCCC
Q 000056 2401 LAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSILALETLKRVVVAGNRARDALVAQGLKVGLVDVLLGLLDWRAGGR 2480 (2526)
Q Consensus 2401 ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~la~etL~r~~~~~~r~~~~Lv~qaL~~~lv~~LL~lLd~~~~~~ 2480 (2526)
||.|++|++|||+++|+.| +|+++||+.+| +++|||||||||+ |++++||+|+||+|||||||+||||+
T Consensus 2074 Lsen~~C~~AMA~l~~i~~-~m~~mkK~~~~---~GLA~EalkR~~~---r~~~eLVAQ~LK~gLvpyLL~LLd~~---- 2142 (2235)
T KOG1789|consen 2074 LSENQFCCDAMAQLPCIDG-IMKSMKKQPSL---MGLAAEALKRLMK---RNTGELVAQMLKCGLVPYLLQLLDSS---- 2142 (2235)
T ss_pred HhhccHHHHHHhccccchh-hHHHHHhcchH---HHHHHHHHHHHHH---HhHHHHHHHHhccCcHHHHHHHhccc----
Confidence 9999999999999999766 56666666543 3599999999999 78999999999999999999999986
Q ss_pred CCCccccccccccccchhHHHHHHHHHHH
Q 000056 2481 NGLSSQMKWNESEASIGRVLAIEVRMMSI 2509 (2526)
Q Consensus 2481 ~g~~~~~~~~~~~a~~~~v~a~~v~~~~~ 2509 (2526)
||++.|+|+++.|+|++++++.|++++-
T Consensus 2143 -tL~~~~~~aas~A~Iv~aLk~~~~~l~v 2170 (2235)
T KOG1789|consen 2143 -TLNGVSNGAAARAEIVDALKSAILDLKV 2170 (2235)
T ss_pred -cccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999998874
|
|
| >KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14296 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14288 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PTZ00037 DnaJ_C chaperone protein; Provisional | Back alignment and domain information |
|---|
| >PRK14286 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14287 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14279 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14276 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14282 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PF14237 DUF4339: Domain of unknown function (DUF4339) | Back alignment and domain information |
|---|
| >PRK14283 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14280 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14299 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14298 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14294 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14297 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14285 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14301 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14277 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14278 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14284 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14291 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK10767 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14281 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14295 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14289 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14290 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK10266 curved DNA-binding protein CbpA; Provisional | Back alignment and domain information |
|---|
| >TIGR02349 DnaJ_bact chaperone protein DnaJ | Back alignment and domain information |
|---|
| >PRK14292 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >PRK14300 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PHA03102 Small T antigen; Reviewed | Back alignment and domain information |
|---|
| >PTZ00341 Ring-infected erythrocyte surface antigen; Provisional | Back alignment and domain information |
|---|
| >KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14293 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
| >cd06257 DnaJ DnaJ domain or J-domain | Back alignment and domain information |
|---|
| >smart00271 DnaJ DnaJ molecular chaperone homology domain | Back alignment and domain information |
|---|
| >PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] | Back alignment and domain information |
|---|
| >PTZ00100 DnaJ chaperone protein; Provisional | Back alignment and domain information |
|---|
| >KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK09430 djlA Dna-J like membrane chaperone protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05014 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
| >PHA02624 large T antigen; Provisional | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK01356 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
| >KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK03578 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
| >COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK00294 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
| >TIGR00714 hscB Fe-S protein assembly co-chaperone HscB | Back alignment and domain information |
|---|
| >COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >PRK01773 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
| >KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF02213 GYF: GYF domain; InterPro: IPR003169 The glycine-tyrosine-phenylalanine (GYF) domain is an around 60-amino acid domain which contains a conserved GP[YF]xxxx[MV]xxWxxx[GN]YF motif | Back alignment and domain information |
|---|
| >cd00072 GYF GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00444 GYF Contains conserved Gly-Tyr-Phe residues | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) [] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division [] | Back alignment and domain information |
|---|
| >KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 2526 | ||||
| 2lo1_A | 71 | Nmr Structure Of The Protein Bc008182, A Dnaj-Like | 2e-07 | ||
| 2och_A | 73 | J-domain Of Dnj-12 From Caenorhabditis Elegans Leng | 2e-06 | ||
| 2dmx_A | 92 | Solution Structure Of The J Domain Of Dnaj Homolog | 3e-04 | ||
| 2ej7_A | 82 | Solution Structure Of The Dnaj Domain Of The Human | 4e-04 | ||
| 1bq0_A | 103 | J-Domain (Residues 1-77) Of The Escherichia Coli N- | 4e-04 | ||
| 1xbl_A | 107 | Nmr Structure Of The J-Domain (Residues 2-76) In Th | 4e-04 | ||
| 2ctr_A | 88 | Solution Structure Of J-Domain From Human Dnaj Subf | 5e-04 | ||
| 1hdj_A | 77 | Human Hsp40 (Hdj-1), Nmr Length = 77 | 7e-04 | ||
| 1bqz_A | 77 | J-Domain (Residues 1-77) Of The Escherichia Coli N- | 8e-04 | ||
| 2ctw_A | 109 | Solution Structure Of J-Domain From Mouse Dnaj Subf | 9e-04 |
| >pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 | Back alignment and structure |
|
| >pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 | Back alignment and structure |
| >pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 | Back alignment and structure |
| >pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 | Back alignment and structure |
| >pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 | Back alignment and structure |
| >pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 | Back alignment and structure |
| >pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 | Back alignment and structure |
| >pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 | Back alignment and structure |
| >pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 | Back alignment and structure |
| >pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 87.6 bits (216), Expect = 4e-17
Identities = 86/603 (14%), Positives = 171/603 (28%), Gaps = 196/603 (32%)
Query: 1238 TQVGEAALA---ILHNMVSAH-SDLD-----DAGEIVTPTPRVKWILSSSRCLPHIAQA- 1287
+ GE IL A + D D + + + I+ S
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS----KDAVSGT 64
Query: 1288 ------MLSGEPSIVEAA-AALLK----------AVVTRNPKAMIRLYSTGAFYFALAYP 1330
+LS + +V+ +L+ R P M R+Y
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI---------EQ 115
Query: 1331 GSNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAK-RSVLGGLLPESLLYVLERSGPAA 1389
LY+ Q+F+ +V S P K R L L P + + G
Sbjct: 116 RDRLYNDNQVFAKYNV------------SRLQPYLKLRQALLELRPAKNVLI---DGVLG 160
Query: 1390 FS----AAMVSDSDTPE------IIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEY 1439
A V S + I W ++ N VL+ L ++ + S ++
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWL-NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 1440 APMPPVTYPELKDE---MWCHRYY------LRNLCDE---------------------IQ 1469
+ + ++ E + + Y L N+ +
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 1470 FPNWPIVEHVEFLQSLLVMWREE--------LTRRPMDLSEEEACKI--LEISL------ 1513
F + H+ + + +E L RP DL E +S+
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE-VLTTNPRRLSIIAESIR 338
Query: 1514 DDVSSDDSHKSYSSEEMSN-ISKKIENIDEEKLKRQYRKLAMKYHPDKN-PEGREKFLAV 1571
D +++ D+ K + ++++ I + ++ + ++ + +L++ + P + P +
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSAHIPTILLSLIWF 397
Query: 1572 QKAYERLQATMQGL-------QGPQPWR-----LLLLLKGQC--------ILYRRY---- 1607
+ + L + P+ + L LK + + Y
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 1608 ----GDVLEP------FKYAGYPMLLNAVTVDED--------DNNFLSSDRAPLLVAASE 1649
D++ P + + G+ L N + D FL +
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGH-HLKNIEHPERMTLFRMVFLDFRFLEQK-----IRHDS 511
Query: 1650 LLWLTCASSSLNG------------------EELVRDGGIQLLSTLL--------SRCMC 1683
W + S LN E LV +L L S+
Sbjct: 512 TAW-NASGSILNTLQQLKFYKPYICDNDPKYERLVNA----ILDFLPKIEENLICSKYTD 566
Query: 1684 VVQ 1686
+++
Sbjct: 567 LLR 569
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 | Back alignment and structure |
|---|
| >1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 | Back alignment and structure |
|---|
| >2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 | Back alignment and structure |
|---|
| >2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 | Back alignment and structure |
|---|
| >1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 | Back alignment and structure |
|---|
| >1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 | Back alignment and structure |
|---|
| >2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 | Back alignment and structure |
|---|
| >2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 | Back alignment and structure |
|---|
| >2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 | Back alignment and structure |
|---|
| >2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 | Back alignment and structure |
|---|
| >2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 | Back alignment and structure |
|---|
| >2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 | Back alignment and structure |
|---|
| >2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 | Back alignment and structure |
|---|
| >2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 | Back alignment and structure |
|---|
| >2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 | Back alignment and structure |
|---|
| >2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
| >3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 | Back alignment and structure |
|---|
| >1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 | Back alignment and structure |
|---|
| >1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 | Back alignment and structure |
|---|
| >2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 | Back alignment and structure |
|---|
| >3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 | Back alignment and structure |
|---|
| >3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 | Back alignment and structure |
|---|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 | Back alignment and structure |
|---|
| >1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 | Back alignment and structure |
|---|
| >2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 | Back alignment and structure |
|---|
| >1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 | Back alignment and structure |
|---|
| >3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 | Back alignment and structure |
|---|
| >1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 | Back alignment and structure |
|---|
| >2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 | Back alignment and structure |
|---|
| >3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
| >3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2526 | |||
| 2och_A | 73 | Hypothetical protein DNJ-12; HSP40, J-domain, chap | 99.3 | |
| 2dn9_A | 79 | DNAJ homolog subfamily A member 3; J-domain, TID1, | 99.26 | |
| 1iur_A | 88 | KIAA0730 protein; DNAJ like domain, riken structur | 99.24 | |
| 2ctp_A | 78 | DNAJ homolog subfamily B member 12; J-domain, chap | 99.24 | |
| 2o37_A | 92 | Protein SIS1; HSP40, J-domain, cochaperone, APC900 | 99.23 | |
| 2ej7_A | 82 | HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati | 99.22 | |
| 2ctr_A | 88 | DNAJ homolog subfamily B member 9; J-domain, chape | 99.22 | |
| 2cug_A | 88 | Mkiaa0962 protein; DNAJ-like domain, structural ge | 99.2 | |
| 1hdj_A | 77 | Human HSP40, HDJ-1; molecular chaperone; NMR {Homo | 99.19 | |
| 2ctw_A | 109 | DNAJ homolog subfamily C member 5; J-domain, chape | 99.17 | |
| 2yua_A | 99 | Williams-beuren syndrome chromosome region 18 prot | 99.16 | |
| 2ys8_A | 90 | RAB-related GTP-binding protein RABJ; DNAJ domain, | 99.15 | |
| 2dmx_A | 92 | DNAJ homolog subfamily B member 8; DNAJ J domain, | 99.15 | |
| 2ctq_A | 112 | DNAJ homolog subfamily C member 12; J-domain, chap | 99.15 | |
| 2lgw_A | 99 | DNAJ homolog subfamily B member 2; J domain, HSJ1A | 99.13 | |
| 1wjz_A | 94 | 1700030A21RIK protein; J-domain, DNAJ like protein | 99.12 | |
| 1faf_A | 79 | Large T antigen; J domain, HPD motif, anti-paralle | 99.12 | |
| 1gh6_A | 114 | Large T antigen; tumor suppressor, oncoprotein, an | 99.11 | |
| 2guz_A | 71 | Mitochondrial import inner membrane translocase su | 99.1 | |
| 1bq0_A | 103 | DNAJ, HSP40; chaperone, heat shock, protein foldin | 99.05 | |
| 2qsa_A | 109 | DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s | 99.03 | |
| 2qwo_B | 92 | Putative tyrosine-protein phosphatase auxilin; cha | 99.03 | |
| 2pf4_E | 174 | Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, | 99.01 | |
| 3apq_A | 210 | DNAJ homolog subfamily C member 10; thioredoxin fo | 98.99 | |
| 3lz8_A | 329 | Putative chaperone DNAJ; structure genomics, struc | 98.96 | |
| 2l6l_A | 155 | DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, | 98.92 | |
| 3ag7_A | 106 | Putative uncharacterized protein F9E10.5; J-domain | 98.91 | |
| 1n4c_A | 182 | Auxilin; four helix bundle, protein binding; NMR { | 98.82 | |
| 3bvo_A | 207 | CO-chaperone protein HSCB, mitochondrial precurso; | 98.78 | |
| 1fpo_A | 171 | HSC20, chaperone protein HSCB; molecular chaperone | 98.76 | |
| 3hho_A | 174 | CO-chaperone protein HSCB homolog; structural geno | 98.69 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 98.67 | |
| 3uo3_A | 181 | J-type CO-chaperone JAC1, mitochondrial; structura | 98.66 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 98.52 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 98.5 | |
| 3apo_A | 780 | DNAJ homolog subfamily C member 10; PDI family, th | 98.49 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 98.39 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 98.36 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 98.29 | |
| 2guz_B | 65 | Mitochondrial import inner membrane translocase su | 98.22 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 98.19 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 98.19 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 98.16 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 98.11 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 98.03 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 98.01 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 97.93 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 97.9 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.89 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 97.87 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 97.84 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 97.84 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 97.83 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 97.81 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 97.81 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 97.69 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 97.61 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 97.49 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 97.26 | |
| 1wh2_A | 78 | Hypothetical protein AT5G08430; GYF domain, struct | 97.23 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 97.16 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.13 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 97.09 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 96.98 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 96.92 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 96.82 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 96.71 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 96.7 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 96.32 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 95.3 | |
| 3k3v_A | 100 | Protein SMY2; GYF domain, poly-proline binding, do | 94.77 | |
| 3tt9_A | 233 | Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | 93.11 | |
| 3opb_A | 778 | SWI5-dependent HO expression protein 4; heat and a | 92.37 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 91.47 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 89.55 | |
| 3tt9_A | 233 | Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | 86.05 | |
| 4gmo_A | 684 | Putative uncharacterized protein; ARM, heat, solen | 85.87 | |
| 3grl_A | 651 | General vesicular transport factor P115; vesicle t | 85.18 | |
| 3opb_A | 778 | SWI5-dependent HO expression protein 4; heat and a | 82.64 |
| >2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=125.87 Aligned_cols=66 Identities=36% Similarity=0.712 Sum_probs=59.3
Q ss_pred hHHHHHHhcccccCCCCCCccccccchhccccccccCCCCHHHHHHHHHHHHHHHCCCCCCchHHHHHHHHHHHHHhhcc
Q 000056 1502 EEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQAT 1581 (2526)
Q Consensus 1502 ~~~ay~iLgv~~~~~~~~~~~~~~~~~~~~~~s~~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd~ 1581 (2526)
..++|++|||++ +++.++||++||+|+++|||||++++.++|+.|++||++|+|+
T Consensus 7 ~~~~y~iLgl~~-------------------------~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~ 61 (73)
T 2och_A 7 ETGYYDVLGVKP-------------------------DASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDE 61 (73)
T ss_dssp CCCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSH
T ss_pred CCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCH
Confidence 347899999994 7899999999999999999999998889999999999999996
Q ss_pred ccCCCCCChhhHHhhhhhhcccccccCC
Q 000056 1582 MQGLQGPQPWRLLLLLKGQCILYRRYGD 1609 (2526)
Q Consensus 1582 ~~r~~~p~~~~~~liLr~qr~~Ydr~g~ 1609 (2526)
. +|..||++|+
T Consensus 62 ~-----------------~R~~YD~~g~ 72 (73)
T 2och_A 62 K-----------------KRQIYDQGGE 72 (73)
T ss_dssp H-----------------HHHHHHHTC-
T ss_pred H-----------------HHHHHHhcCC
Confidence 4 6788999986
|
| >2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 | Back alignment and structure |
|---|
| >2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 | Back alignment and structure |
|---|
| >2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 | Back alignment and structure |
|---|
| >1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 | Back alignment and structure |
|---|
| >1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 | Back alignment and structure |
|---|
| >2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A | Back alignment and structure |
|---|
| >2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A | Back alignment and structure |
|---|
| >2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C | Back alignment and structure |
|---|
| >3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} | Back alignment and structure |
|---|
| >3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A | Back alignment and structure |
|---|
| >2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J | Back alignment and structure |
|---|
| >3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 | Back alignment and structure |
|---|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
| >3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
| >1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1 | Back alignment and structure |
|---|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
| >3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A | Back alignment and structure |
|---|
| >3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
| >3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
| >3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
| >4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A | Back alignment and structure |
|---|
| >3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A | Back alignment and structure |
|---|
| >3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 2526 | ||||
| d1nz6a_ | 98 | a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T | 3e-06 | |
| d1fpoa1 | 76 | a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma | 1e-05 | |
| d1xm9a1 | 457 | a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo | 3e-05 | |
| d1xm9a1 | 457 | a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo | 2e-04 | |
| d1iura_ | 88 | a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human | 4e-05 | |
| d1fafa_ | 79 | a.2.3.1 (A:) Large T antigen, the N-terminal J dom | 5e-04 | |
| d1jdha_ | 529 | a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) | 0.002 | |
| d1xbla_ | 75 | a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain | 0.002 |
| >d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Auxilin J-domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.3 bits (107), Expect = 3e-06
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 1538 ENIDEEKLKRQYRKLAMKYHPDKNP------EGREKFLAVQKAYERL 1578
+ + E++K+ YRK + HPDK + F+ + A+
Sbjct: 43 DLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEF 89
|
| >d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 | Back information, alignment and structure |
|---|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 | Back information, alignment and structure |
|---|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 | Back information, alignment and structure |
|---|
| >d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 | Back information, alignment and structure |
|---|
| >d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 | Back information, alignment and structure |
|---|
| >d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2526 | |||
| d1xbla_ | 75 | DnaJ chaperone, N-terminal (J) domain {Escherichia | 99.3 | |
| d1gh6a_ | 114 | Large T antigen, the N-terminal J domain {Simian v | 99.25 | |
| d1hdja_ | 77 | HSP40 {Human (Homo sapiens) [TaxId: 9606]} | 99.15 | |
| d1wjza_ | 94 | CSL-type zinc finger-containing protein 3 (J-domai | 99.08 | |
| d1iura_ | 88 | Hypothetical protein KIAA0730 {Human (Homo sapiens | 99.08 | |
| d1fafa_ | 79 | Large T antigen, the N-terminal J domain {Murine p | 99.07 | |
| d1fpoa1 | 76 | HSC20 (HSCB), N-terminal (J) domain {Escherichia c | 98.84 | |
| d1nz6a_ | 98 | Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} | 98.78 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 98.24 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 98.14 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.9 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 97.73 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.61 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.56 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.52 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.51 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 96.72 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 95.78 | |
| d1wh2a_ | 78 | Hypothetical rotein At5g08430 {Thale cress (Arabid | 95.55 | |
| d1syxb1 | 62 | GYF domain from cd2bp2 protein {Human (Homo sapien | 90.19 | |
| d1mixa2 | 92 | Talin {Chicken (Gallus gallus) [TaxId: 9031]} | 89.28 | |
| d2cy5a1 | 129 | EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) | 85.82 | |
| d1mixa2 | 92 | Talin {Chicken (Gallus gallus) [TaxId: 9031]} | 82.42 |
| >d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: DnaJ chaperone, N-terminal (J) domain species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=4.6e-13 Score=128.32 Aligned_cols=65 Identities=35% Similarity=0.707 Sum_probs=58.2
Q ss_pred HHHHHhcccccCCCCCCccccccchhccccccccCCCCHHHHHHHHHHHHHHHCCCCCCc---hHHHHHHHHHHHHHhhc
Q 000056 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE---GREKFLAVQKAYERLQA 1580 (2526)
Q Consensus 1504 ~ay~iLgv~~~~~~~~~~~~~~~~~~~~~~s~~~~~a~e~~IKkAYRkLa~k~HPDKnp~---a~ekF~~I~~AYEvLsd 1580 (2526)
+.|+||||++ ++|.++||+|||+++++|||||+++ ++++|..|++||++|+|
T Consensus 4 dyY~vLgv~~-------------------------~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d 58 (75)
T d1xbla_ 4 DYYEILGVSK-------------------------TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTD 58 (75)
T ss_dssp CTTTTTCCSS-------------------------SCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHcCCCC-------------------------CcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCC
Confidence 6799999994 7899999999999999999999863 67889999999999999
Q ss_pred cccCCCCCChhhHHhhhhhhcccccccCCc
Q 000056 1581 TMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2526)
Q Consensus 1581 ~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2526)
+. +|..||+||..
T Consensus 59 ~~-----------------~R~~YD~~g~~ 71 (75)
T d1xbla_ 59 SQ-----------------KRAAYDQYGHA 71 (75)
T ss_dssp SH-----------------HHHHHHHHTTS
T ss_pred HH-----------------HHHHHHHhCcc
Confidence 75 68899999964
|
| >d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
| >d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} | Back information, alignment and structure |
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| >d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wh2a_ d.76.1.1 (A:) Hypothetical rotein At5g08430 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1syxb1 d.76.1.1 (B:25-86) GYF domain from cd2bp2 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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