Citrus Sinensis ID: 000113
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 2159 | 2.2.26 [Sep-21-2011] | |||||||
| Q9GYZ0 | 1463 | Kinesin-like protein KIF1 | yes | no | 0.236 | 0.349 | 0.433 | 1e-112 | |
| Q8L7Y8 | 1313 | Kinesin-like protein KIN1 | no | no | 0.167 | 0.274 | 0.546 | 1e-109 | |
| Q9LDN0 | 1292 | Kinesin-like protein KIN1 | no | no | 0.174 | 0.291 | 0.526 | 1e-109 | |
| Q91785 | 1388 | Kinesin-like protein KIF1 | N/A | no | 0.264 | 0.412 | 0.405 | 1e-106 | |
| Q498L9 | 1387 | Kinesin-like protein KIF1 | N/A | no | 0.257 | 0.400 | 0.405 | 1e-105 | |
| Q6P9L6 | 1387 | Kinesin-like protein KIF1 | yes | no | 0.230 | 0.359 | 0.425 | 1e-104 | |
| Q9NS87 | 1388 | Kinesin-like protein KIF1 | yes | no | 0.226 | 0.353 | 0.438 | 1e-104 | |
| Q7TSP2 | 1385 | Kinesin-like protein KIF1 | yes | no | 0.228 | 0.355 | 0.424 | 1e-103 | |
| P46869 | 786 | Kinesin-like protein FLA1 | N/A | no | 0.178 | 0.491 | 0.4 | 1e-78 | |
| P46872 | 699 | Kinesin-II 85 kDa subunit | no | no | 0.163 | 0.505 | 0.427 | 6e-78 |
| >sp|Q9GYZ0|KIF15_STRPU Kinesin-like protein KIF15 OS=Strongylocentrotus purpuratus GN=KIF15 PE=1 SV=1 | Back alignment and function desciption |
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Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/531 (43%), Positives = 334/531 (62%), Gaps = 20/531 (3%)
Query: 163 VQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETR-FTFDHIACEMISQEKLFR 221
++V +R+RP S + +CL+ T++ PE + FT+DH+ +QE +F
Sbjct: 19 IKVFVRVRP-SESHDADAAFGQCLEVRLPDTIIMHSKPEPKVFTYDHVTAANTTQESVFT 77
Query: 222 VAGLPMVENCLSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSR 281
G ++E+C+ G+N +FAYGQTGSGKT+TM+G + + ++ G+ PR FEYLFS
Sbjct: 78 AVGKRIIESCVGGFNGTIFAYGQTGSGKTFTMLGPCEDGDNFHHEMRGVIPRSFEYLFSL 137
Query: 282 IRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEYNV 341
+ E E D R +F C+CSFLEIYNEQI DLL+P+S L LRE++KKGV+V+ L E V
Sbjct: 138 VNREREKHGD-RYEFLCRCSFLEIYNEQIYDLLDPASLGLHLRENMKKGVFVDGLIERAV 196
Query: 342 KTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLNLVD 401
+ ++ +L G NR++AAT MN ESSRSH+V T IES +K +++ R ++L+LVD
Sbjct: 197 ASASEAYGVLQAGWHNRRVAATSMNRESSRSHAVFTVSIESKEKKAGVSNIRVSQLHLVD 256
Query: 402 LAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQ 461
LAGSERQK + A G RLKEA +INKSLS LG VIM+LVD A GK RHVPYRDS+L+FLL+
Sbjct: 257 LAGSERQKDTKAIGVRLKEAGSINKSLSILGNVIMALVDIAHGKQRHVPYRDSKLSFLLR 316
Query: 462 DSLGGNSKTTIIANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQ 521
DSLGGN+KT IIANV P ETLSTLKFA+RAK+I+N A VNE+ G+V LQ +I+
Sbjct: 317 DSLGGNAKTYIIANVHPDAKCFGETLSTLKFARRAKMIKNRAVVNEDTQGNVMHLQAEIR 376
Query: 522 QLKDKLSSLMKHQNLLRSPSSSTPEVGESSQGDIIKKYSFPGEGMMDNGVQNVQNEKTKR 581
+L++ L ++ R PS S G+S + + + P + + + K K+
Sbjct: 377 RLREALCMKGAEGSIPRGPSES----GDSQMSNSSTESNGP---VSGQQSGSSSSSKWKK 429
Query: 582 --LECMLLGSLRREKMAEAVTQKLEAEIEHMNRLLCQREEDTQHTKMMLRFREEKIKQLE 639
LE M SLR + E +++ ++ + L +R++ KM+++FR I L+
Sbjct: 430 YFLEAM---SLR--DIVEVEKREMREKVSSLEELCSKRDQVISSNKMIIKFRNSTIDMLQ 484
Query: 640 LLVNGSVTAE-KYLMDENIALKEEIQLLQARIDRNPELTRFALENIRLLEQ 689
N ++ E + L++EN LK+EI+ LQ +++ NP + R+ +EN L Q
Sbjct: 485 KTKNKALLKEDRDLLNEN--LKKEIEQLQEQLEHNPFVMRYVVENQSLRAQ 533
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Plus-end directed kinesin-like motor enzyme involved in mitotic spindle assembly. Plays a role in positioning spindle poles during mitosis, specifically at prometaphase. Strongylocentrotus purpuratus (taxid: 7668) |
| >sp|Q8L7Y8|KN12B_ARATH Kinesin-like protein KIN12B OS=Arabidopsis thaliana GN=KIN12B PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LDN0|KN12A_ARATH Kinesin-like protein KIN12A OS=Arabidopsis thaliana GN=KIN12A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q91785|KI15A_XENLA Kinesin-like protein KIF15-A OS=Xenopus laevis GN=kif15-a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q498L9|KI15B_XENLA Kinesin-like protein KIF15-B OS=Xenopus laevis GN=kif15-b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6P9L6|KIF15_MOUSE Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9NS87|KIF15_HUMAN Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q7TSP2|KIF15_RAT Kinesin-like protein KIF15 OS=Rattus norvegicus GN=Kif15 PE=2 SV=1 | Back alignment and function description |
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| >sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1 | Back alignment and function description |
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| >sp|P46872|KRP85_STRPU Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP85 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2159 | ||||||
| 224108850 | 1851 | predicted protein [Populus trichocarpa] | 0.817 | 0.953 | 0.548 | 0.0 | |
| 297736796 | 1997 | unnamed protein product [Vitis vinifera] | 0.511 | 0.553 | 0.639 | 0.0 | |
| 255556530 | 2140 | ATP binding protein, putative [Ricinus c | 0.559 | 0.564 | 0.550 | 0.0 | |
| 449529088 | 1444 | PREDICTED: uncharacterized protein LOC10 | 0.491 | 0.734 | 0.552 | 0.0 | |
| 359477641 | 2270 | PREDICTED: uncharacterized protein LOC10 | 0.367 | 0.349 | 0.680 | 0.0 | |
| 449441656 | 2133 | PREDICTED: uncharacterized protein LOC10 | 0.471 | 0.476 | 0.527 | 0.0 | |
| 356564668 | 2216 | PREDICTED: uncharacterized protein LOC10 | 0.349 | 0.340 | 0.640 | 0.0 | |
| 359475390 | 2959 | PREDICTED: uncharacterized protein LOC10 | 0.517 | 0.377 | 0.464 | 0.0 | |
| 145338627 | 2066 | phragmoplast orienting kinesin 1 [Arabid | 0.343 | 0.358 | 0.628 | 0.0 | |
| 255561647 | 2970 | ATP binding protein, putative [Ricinus c | 0.489 | 0.355 | 0.478 | 0.0 |
| >gi|224108850|ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|222864030|gb|EEF01161.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1934 bits (5010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1109/2021 (54%), Positives = 1369/2021 (67%), Gaps = 256/2021 (12%)
Query: 166 LIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEKLFRVAGL 225
+IRIRPLSNIEKVSQGYV WLGHPETRFTFDH++CE ISQEKLF+VAGL
Sbjct: 1 MIRIRPLSNIEKVSQGYV------------WLGHPETRFTFDHVSCETISQEKLFKVAGL 48
Query: 226 PMVENCLSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSRIRME 285
PMVENC+SGYNSCMFAYGQTGSGKTYTMMGEIN+VE KL+ DCGITPR+FE+LFSRIRME
Sbjct: 49 PMVENCMSGYNSCMFAYGQTGSGKTYTMMGEINQVECKLSADCGITPRVFEHLFSRIRME 108
Query: 286 EENRRDERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEYNVKTVN 345
EE+RRDE+L+FSCKCSFLEIYNEQITDLLEPSSTNLQLREDL KGVYVENLTEYNV+TVN
Sbjct: 109 EESRRDEKLRFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLNKGVYVENLTEYNVRTVN 168
Query: 346 DVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLNLVDLAGS 405
DV+KLL QGAANRKMAATYMNSESSRSHSV TC+IES WEKDSM HFRFARLNLVDLAGS
Sbjct: 169 DVIKLLQQGAANRKMAATYMNSESSRSHSVFTCVIESWWEKDSMNHFRFARLNLVDLAGS 228
Query: 406 ERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQDSLG 465
ERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVD A GKH+HVPYRDSRLTFLLQDSLG
Sbjct: 229 ERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDLAHGKHKHVPYRDSRLTFLLQDSLG 288
Query: 466 GNSKTTIIANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQQLKD 525
GNSKTTIIANVSPS CSA+ETLSTLKFAQRAKLIQNNAKVNE+ASGDV ALQ+QIQQLKD
Sbjct: 289 GNSKTTIIANVSPSTCSAHETLSTLKFAQRAKLIQNNAKVNEDASGDVGALQKQIQQLKD 348
Query: 526 KLSSLMKHQNLLRSPSSSTPEVGESSQGDIIKKYSFPGEGMMDN-GVQNVQNEKTKRLEC 584
+LS LMKH NL R S P SS+G + +S ++DN + +++N+K K +E
Sbjct: 349 QLSFLMKHHNLSRPLLSCMP----SSEGPKLADHSSEDRRIIDNHSMLSIENKKVKCMEA 404
Query: 585 MLLGSLRREKMAEAVTQKLEAEIEHMNRLLCQREEDTQHTKMMLRFREEKIKQLELLVNG 644
+L G+LRREK+A+ QKLE E+E +N+L CQ+EE+ QHTK++LRFR+EKIKQLE L++G
Sbjct: 405 ILAGALRREKLADTAFQKLENEMERVNQLTCQKEEEVQHTKLILRFRDEKIKQLESLMDG 464
Query: 645 SVTAEKYLMDENIALKEEIQLLQARIDRNPELTRFALENIRLLEQLQLFQSFYEQGEREK 704
S+ A+ YLM+ EN L E++QL Q ++
Sbjct: 465 SLPADHYLME---------------------------ENKALKEEIQLLQPRLDKS---- 493
Query: 705 LLAELAELRDQLLDIVEGKERFSSRHENQENDTTTELENCRNMNSKLMREVEELRTELRN 764
EL + + ++E + F +E E R M L+ E+ ELR +L
Sbjct: 494 --PELTRFALENIRLLEQLQLFQKFYEQGE----------REM---LLGEISELRDQLL- 537
Query: 765 CGQATSSSAADSFSKDSVEFRRADKFSLVETISMKTDSGDEQTPYNLTDDQNMRNDQILH 824
VE R KFS + + D T L D +NM + + +
Sbjct: 538 -----------------VELERNLKFS------SRHECQDNDTVKELEDCRNMNSKLMRY 574
Query: 825 PSDTEKQLTDAKMLIEALEREQVHQNRELHLMQEQNQRYMEVLSHRDYAEGHSLGKSGSY 884
++ +L + EL LMQE N Y+E+L +D + +SGS
Sbjct: 575 HCKSQVRLIE-----------------ELQLMQEHNNMYIEILKKKDNKVREPVLESGSN 617
Query: 885 CLESNNFEKQKKGMIKESSKGIDGTSLQAKLDKLTEELETARVLNCQYQEDQASHLSCQH 944
CLE +N ++Q + ++ E S+ I LQAKLDKL ++LE AR LN YQEDQAS L QH
Sbjct: 618 CLELHNLKEQNEVLVMEGSREIKSNPLQAKLDKLNKDLEEARSLNYHYQEDQASKLYQQH 677
Query: 945 QVDLVREQVEMEATKTILQLQEEVASLQLELHENLCCMTEENTCLRNTIAAKEEEIRSRC 1004
Q +LV E+VE E T+TIL LQEE+ +LQLEL E L CMT+ENT LRNT+AAKE EIR+ C
Sbjct: 678 QAELVCEEVETETTRTILHLQEEITALQLELDERLYCMTQENTGLRNTVAAKEAEIRALC 737
Query: 1005 TEWEKATLELTNFLADGSRSLRDASGQIESIVCLFPQFNVEVTENVGRAAKVCIEKDETI 1064
EWE+ATLELT+FL +GS+SL+DASGQIESI FP+ NV + E+ RAA+ C++K+ETI
Sbjct: 738 GEWERATLELTSFLTEGSKSLKDASGQIESIANAFPKLNVWIGEHAERAARACVDKEETI 797
Query: 1065 LLLQKSLEEAQKMVVEMKEKCISLKGATIALNEIQHLGNEECTDEAIHLSMTLNKKIEMV 1124
L L+KSLE+A+KMV++M+ K SL+ AT+ALN+ N E ++E IH +M LN+KI MV
Sbjct: 798 LQLEKSLEDARKMVMDMEMKLNSLREATMALNDFPQSDNNESSEETIHSTMQLNEKINMV 857
Query: 1125 KLLESELKSKEDQITEAEKRAQASFLVVKWLSDFNKIGLPVDKNSKLASQSLKEH----- 1179
K+LESE+K KE I EAEKRA A+FLVVKWLS+ +K + K LKE
Sbjct: 858 KMLESEIKLKEIHINEAEKRADAAFLVVKWLSECHKDLVKEIHEMKGKIMELKERQMDFQ 917
Query: 1180 ------------ESLKLENQFHILQQIKDELAKTNDRLHIIEDVINKISSAHVLPPKDED 1227
E LK +NQ HILQ I+ ELAK NDR+ I+ D ++K S+H ED
Sbjct: 918 SSTMNWKAREPLEFLKFDNQLHILQLIRVELAKINDRMEIVSDFVDKKISSHNCLLNKED 977
Query: 1228 MIDVDGWSADCSTS-----ASDYSTDSVASEKSSGRSSYSYSSKFYSKATEEIVNLKFQG 1282
++ DGWS D S S SD +SV+ S+ SK K TE+
Sbjct: 978 FVEADGWSTDSSASCYSMIGSDLFPESVSLGNKLDGKSHGCCSKLSRKITEQ-------- 1029
Query: 1283 VSVPKLDLEESDKVKKLLKRSN-HSDAIAFGLREEMEMAFNDETSNHASSFFSKFEEARE 1341
+DLE K S+ S++ F + F K EEA
Sbjct: 1030 -----MDLESR-------KGSDVQSESEDFHI------------------FLRKCEEANA 1059
Query: 1342 TMREADSMLNTLLKANENAKQLNDKWRQAGEQLMADRASLTDEVEQLKFLIRLKEEENEL 1401
TM+EAD MLN L+ ANENAKQL+D W+QA E+LM DR+ L +E QLK + LKEEEN+L
Sbjct: 1060 TMKEADYMLNALMGANENAKQLSDMWKQANEELMVDRSRLVEENGQLKSSLCLKEEENKL 1119
Query: 1402 LMDHLHFNMSEIDTSISLLEGCFLQVQKEVEDRFKELYSDALLMGRDVHHFISNSKSLQD 1461
L+D ++E+ S+SLLE CF Q+Q+E E+R+K +YSD L M R++ FI NS+S +
Sbjct: 1120 LLDENSHGLAEVANSVSLLEACFQQMQREEEERYKVIYSDVLSMVREMLSFICNSRSSVE 1179
Query: 1462 DIFSGIMEKGFQQFVFYLCHIGAFMHKILNSSIESGFHPLRQQENYIFRNLSPRFLLNSQ 1521
DIFS IME GF + + Y C +G +HKI + + GF QQE ++ + S R
Sbjct: 1180 DIFSEIMENGFARSIMYHCLVGELVHKIPSFIAQPGFSSFNQQERHMVMDTSQRVCSTGH 1239
Query: 1522 DDILIT-EKGAEDGDHNEWGTNMEEF-FLSHSHLSYENLSLKKELQRKEVLLQGLLFDFS 1579
+ ++T E+G E+ + T +EE SH L+YENLSLKKEL+RKE LL+GLLFDFS
Sbjct: 1240 TESIVTNEQGNEEQRLRDSFTTLEEGEGPSHDKLTYENLSLKKELERKESLLKGLLFDFS 1299
Query: 1580 LLQESASNKKDIKDETEKLFSTLSQVRQDLDRKASQLDNLLLQHEKLEASLTDTENALVI 1639
LLQE++SN+ D KDETEKL LS+V+ +L++K SQ+D+LL+QH K+E LTDTENAL++
Sbjct: 1300 LLQETSSNRTDFKDETEKLIFALSEVQHELEKKTSQIDDLLVQHRKVEGHLTDTENALLV 1359
Query: 1640 -------AKGTIDTLSDQNADLRVLLKDLYLKKSEAEEHLEEQKEVITGLEKEILHRTSE 1692
AK TID LSD+NA+LR+LLKD+YLKKSEAEE LEEQKEV LE EI+H +S
Sbjct: 1360 SISDLAQAKETIDALSDENAELRMLLKDIYLKKSEAEEQLEEQKEVTKSLEDEIIHLSS- 1418
Query: 1693 DKKLLTSVESIAEDLRIVTSDRDKLCEEVESVEEELRKVSKERDKLWVEICSLNDKLAMA 1752
S ES KL VES+E+EL K+ ERD+L EI S NDKL MA
Sbjct: 1419 ------STES-------------KLRSAVESLEDELEKIRNERDQLREEIRSFNDKLEMA 1459
Query: 1753 YALADENEAIAVEARQ-----ELEASKLYAEQKEEEVKILEHSIEELEHTVNALEKKVYE 1807
Y LADENEAIAVEARQ E EASK+YAEQKEEEVKILEHS+EELE+T+N LEKKVYE
Sbjct: 1460 YGLADENEAIAVEARQACIIAESEASKIYAEQKEEEVKILEHSVEELENTINVLEKKVYE 1519
Query: 1808 MNGEVERHHLIRDSLELEIQALRRRLSTVQNFSDIVDSENINAGHTEDQMSRKLQDRLLQ 1867
MN EVERH LIRDSLELE++ LR+RLSTV+N +DI DSEN N+ ED ++ RLL+
Sbjct: 1520 MNDEVERHRLIRDSLELELRTLRQRLSTVENITDIADSENANSVQKEDSIT-----RLLE 1574
Query: 1868 LQEAHHRIQLLEREKEEQNEEIKRCKDYLSEVVLHSEAQASQYQQKYKTLEAMIREMQTN 1927
L A++RI+LLER+ E+++EIK+CK+Y+SE+VLHSEAQASQ+Q+K
Sbjct: 1575 LHGAYNRIRLLERDITEKDKEIKQCKEYISELVLHSEAQASQFQEK-------------- 1620
Query: 1928 LSNTTAAAAPAQDKIEKSSTRLRGSSSPFRCIASVVQQMNSEKDQELSAATLRIQKLEAL 1987
MN EKDQELS A LRI++LEA+
Sbjct: 1621 --------------------------------------MNLEKDQELSVARLRIEELEAV 1642
Query: 1988 AASRQKEVCMLNTRLAAAESMTHDVIRDLLGVKLDMTNYANLIDQEHVQKLVVAAQQQTQ 2047
+SR+KEVC LN RLAAAESMTHDVIRDLLGVKLDMTNYANLIDQ VQKLV A QQT+
Sbjct: 1643 LSSRKKEVCALNARLAAAESMTHDVIRDLLGVKLDMTNYANLIDQHQVQKLVEDAHQQTE 1702
Query: 2048 ELLAKEQIILNLRKRIEDLIEEHESCTSILKQREADILAAQINVEQLRERDQLLSAQNDM 2107
E LA+EQ ILNLRK+I DL EE ESC + + + AD+LAAQ+ VEQL+ERDQLLSAQN+M
Sbjct: 1703 EFLAREQEILNLRKQINDLAEERESCIAEINVKVADMLAAQMAVEQLKERDQLLSAQNEM 1762
Query: 2108 LKMDKTNLLKRISELDDMVKMLIGTQSTQEQIQQKQSSKNK 2148
LK+DK+NLL+R++ELD+MVK L+GTQ TQ+++ S+K K
Sbjct: 1763 LKVDKSNLLRRVAELDEMVKTLLGTQITQQRVPPTSSAKEK 1803
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736796|emb|CBI25997.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255556530|ref|XP_002519299.1| ATP binding protein, putative [Ricinus communis] gi|223541614|gb|EEF43163.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449529088|ref|XP_004171533.1| PREDICTED: uncharacterized protein LOC101228083, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359477641|ref|XP_002274818.2| PREDICTED: uncharacterized protein LOC100245872 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449441656|ref|XP_004138598.1| PREDICTED: uncharacterized protein LOC101204935 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356564668|ref|XP_003550573.1| PREDICTED: uncharacterized protein LOC100817801 [Glycine max] | Back alignment and taxonomy information |
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| >gi|359475390|ref|XP_002281738.2| PREDICTED: uncharacterized protein LOC100255624 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|145338627|ref|NP_188362.2| phragmoplast orienting kinesin 1 [Arabidopsis thaliana] gi|89160907|gb|ABD62996.1| kinesin POK1 [Arabidopsis thaliana] gi|332642422|gb|AEE75943.1| phragmoplast orienting kinesin 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255561647|ref|XP_002521833.1| ATP binding protein, putative [Ricinus communis] gi|223538871|gb|EEF40469.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2159 | ||||||
| TAIR|locus:2089000 | 2066 | POK1 "phragmoplast orienting k | 0.495 | 0.517 | 0.470 | 0.0 | |
| TAIR|locus:2085844 | 2771 | POK2 "phragmoplast orienting k | 0.336 | 0.262 | 0.544 | 4.7e-273 | |
| TAIR|locus:2129455 | 1292 | PAKRP1 "AT4G14150" [Arabidopsi | 0.174 | 0.291 | 0.529 | 1.5e-117 | |
| TAIR|locus:2088065 | 1313 | KINESIN-12B "AT3G23670" [Arabi | 0.167 | 0.274 | 0.552 | 3.7e-117 | |
| ZFIN|ZDB-GENE-050622-16 | 1378 | kif15 "kinesin family member 1 | 0.470 | 0.736 | 0.301 | 4.6e-102 | |
| UNIPROTKB|E2RJF8 | 1316 | KIF15 "Uncharacterized protein | 0.475 | 0.780 | 0.302 | 2.6e-100 | |
| UNIPROTKB|F1PSL9 | 1384 | KIF15 "Uncharacterized protein | 0.475 | 0.742 | 0.302 | 3.8e-98 | |
| UNIPROTKB|Q498L9 | 1387 | kif15-b "Kinesin-like protein | 0.268 | 0.418 | 0.392 | 3.2e-94 | |
| UNIPROTKB|F1SRA8 | 1388 | KIF15 "Uncharacterized protein | 0.474 | 0.737 | 0.305 | 7e-94 | |
| UNIPROTKB|E1BC41 | 1388 | KIF15 "Uncharacterized protein | 0.471 | 0.732 | 0.303 | 1.2e-93 |
| TAIR|locus:2089000 POK1 "phragmoplast orienting kinesin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2225 (788.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 536/1140 (47%), Positives = 693/1140 (60%)
Query: 8 SRLPSKTSQNEANENQFGASLNPLHFPPPRSPLNSIPDPSQFQK--DIQESDQVYSID-- 63
SR + E+ EN+F ASL+ F P R PLNSIPDPSQ QK + D V ++
Sbjct: 2 SRNVPRIEMPESEENEF-ASLSL--FSPSRPPLNSIPDPSQIQKANHLPHFDLVQKLEGT 58
Query: 64 -----RSLSDRKVVET-SGSFVATHVGTPRVSVRSHGKIHSEPSSTQSTPAXXXXXXXXX 117
R+L K E G + P++ V +GK SEP+S QSTP
Sbjct: 59 RAQHQRTLGPEKKFEVLEGRAGNSSDSNPKI-VNRNGKSRSEPNSAQSTPTRNGARVSLG 117
Query: 118 XXXXXXXXALFS-----RISRGISVVNH-EVSVDVEHFELVDDPLFWKDHNVQVLIRIRP 171
L S RI RG+S+ + HFEL +D FWKDHNVQVLIR+RP
Sbjct: 118 GGCATGARFLQSFGGRGRIPRGVSIAESVSFAETTPHFELNEDHSFWKDHNVQVLIRLRP 177
Query: 172 LSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEKLFRVAGLPMVENC 231
L +E+ +QGY +CLKQ++ QTLVWLGHPE RFTFDH+A E ISQEKLFRVAGLPMVENC
Sbjct: 178 LGTMERANQGYGKCLKQESPQTLVWLGHPEARFTFDHVASETISQEKLFRVAGLPMVENC 237
Query: 232 LSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSRIRMEEENRRD 291
LSGYNSC+FAYGQTGSGKTYTMMGEI+E EG L +DCG+T RIFEYLFSRI+MEEE RRD
Sbjct: 238 LSGYNSCVFAYGQTGSGKTYTMMGEISEAEGSLGEDCGVTARIFEYLFSRIKMEEEERRD 297
Query: 292 ERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEYNVKTVNDVVKLL 351
E LKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDL KGVYVENL E+NV+TV+DV+KLL
Sbjct: 298 ENLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLGKGVYVENLVEHNVRTVSDVLKLL 357
Query: 352 LQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLNLVDLAGSERQKSS 411
LQGA NRK+AAT MNSESSRSHSV TC IES WEKDS+T RFARLNLVDLAGSERQKSS
Sbjct: 358 LQGATNRKIAATRMNSESSRSHSVFTCTIESLWEKDSLTRSRFARLNLVDLAGSERQKSS 417
Query: 412 GAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQDSLGGNSKTT 471
GAEGDRLKEAANINKSLSTLGLVIMSLVD A GKHRHVPYRDSRLTFLLQDSLGGNSKT
Sbjct: 418 GAEGDRLKEAANINKSLSTLGLVIMSLVDLAHGKHRHVPYRDSRLTFLLQDSLGGNSKTM 477
Query: 472 IIANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQQLKDKLSSLM 531
IIANVSPS+CS NETLSTLKFAQRAKLIQNNAKVNE+ASGDVTALQ++I++LK +L+SL+
Sbjct: 478 IIANVSPSLCSTNETLSTLKFAQRAKLIQNNAKVNEDASGDVTALQQEIRKLKVQLTSLL 537
Query: 532 KHQNLLRSPSSSTPEVGESSQGDIIKKYSFPGEGMMDNGVQNVQNEKTKRLECMLLGSLR 591
K+ + + S + ES K GE D V+N ++G+LR
Sbjct: 538 KNHDSCGALSDCISSLEESRYSGTCK---VAGETRQDKCHCQVKNMNDN-----MIGALR 589
Query: 592 REKMAEAVTQKLEAEIEHMNRLLCQREEDTQHTKMMLRFREEKIKQLELLVNGSVTAEKY 651
REK+AE+ QK EAEIE ++ L+ EED + K+ML REEK+ ++E +GS+ ++
Sbjct: 590 REKIAESALQKSEAEIERIDCLVRDMEEDAKRIKIMLNLREEKVGEMEFCTSGSLMTKEC 649
Query: 652 LMDENIALKEEIQLLQARIDRNPELTRFALENIRLLEQLQLFQSFYEQGXXXXXXXXXXX 711
L++EN LK EI+LL+ ID+NPELTR ALEN +L EQLQ +Q FYE G
Sbjct: 650 LIEENKTLKGEIKLLRDSIDKNPELTRSALENTKLREQLQRYQKFYEHGEREALLAEVTG 709
Query: 712 XXDQLLDIVEGKERFSSRHENQENDTTTELENCRNMNSKLMREVEELRTELR---NCGQA 768
DQLLD++E K+ S+H +EN+ E E+CRNMNS L+RE++E++ L N Q
Sbjct: 710 LRDQLLDVLEAKDESFSKHVMKENEMEKEFEDCRNMNSSLIRELDEIQAGLGRYLNFDQI 769
Query: 769 TXXXXXXXXXXXXVEFRRADKFSLVETISMKTDSGDEQTPYNLTDDQNMRNDQILHPSDT 828
+ E +++ ++ TD+ R+
Sbjct: 770 QSNVVASSTRGAEQAETMPTISEIQEEVAISHSKNYDRGALVKTDEGIDRSILQFKLGKL 829
Query: 829 EKQLTDAKML---IEALEREQVHQNRELHLMQEQNQRYMEVLSHRDYAEGHS--LGKSGS 883
K L +A+ L E + Q+ Q ++ +++EQ +E + R E +
Sbjct: 830 MKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQ----VETETARTILELQEEVIALQSE 885
Query: 884 YCLESNNFEKQKKGMIKES--SKGIDGTSLQAKLDKLTEELETARVLNCQYQEDQASHLS 941
+ N ++ + IK++ ++ + +L +K T EL V + ++ ++ +
Sbjct: 886 FQRRICNLTEENQS-IKDTITARESEIRALNQDWEKATLELTNFIVAGSKSIKNASTQIE 944
Query: 942 ---CQH-QVDL-VREQVEMEATKTILQLQEEVASLQLELHENLCCMTEENTCLRN----T 992
C QV+ + + VE +A K ++ +E + LQ L + + E N L + T
Sbjct: 945 SIICSFPQVNAWIGDYVE-KAAKNCIKKEETILLLQKSLEDARILVAEMNLKLNSLKGAT 1003
Query: 993 IAAKEEEIRSRCTEWEKATLELTNFLADGSRSLRDASGQIESIVCLFP--QFNVEVTENV 1050
IA E ++ E+A L N D R S +++++ F Q+++ TE
Sbjct: 1004 IALNEFQLGGNAATTEEA-FNLNN---DVDRM----SDEVDTLESNFKANQYSILKTERH 1055
Query: 1051 GRAA----KVCIEKDETILLLQKSLEEAQKMVVEMKEKCISLKG---ATIALNEIQHLGN 1103
AA K + + +++K +++ K + SL A I+L+ HL +
Sbjct: 1056 AEAALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTLSSISASLSAEGNADISLSRDGHLSD 1115
|
|
| TAIR|locus:2085844 POK2 "phragmoplast orienting kinesin 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2129455 PAKRP1 "AT4G14150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088065 KINESIN-12B "AT3G23670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050622-16 kif15 "kinesin family member 15" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RJF8 KIF15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PSL9 KIF15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q498L9 kif15-b "Kinesin-like protein KIF15-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SRA8 KIF15 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BC41 KIF15 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 2159 | |||
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 0.0 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-137 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-128 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-121 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 1e-116 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-111 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 1e-108 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-108 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-103 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 1e-100 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 4e-99 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 5e-99 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 5e-96 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 3e-76 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 6e-75 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 2e-68 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 3e-68 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 1e-65 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-39 | |
| pfam12711 | 86 | pfam12711, Kinesin-relat_1, Kinesin motor | 2e-29 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 1e-15 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-14 | |
| pfam06548 | 488 | pfam06548, Kinesin-related, Kinesin-related | 2e-13 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-12 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-10 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-10 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-10 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-09 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 2e-08 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 3e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 7e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-07 | |
| PRK01156 | 895 | PRK01156, PRK01156, chromosome segregation protein | 4e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-07 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 7e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-07 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 1e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-06 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 3e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-05 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 2e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 2e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 4e-04 | |
| TIGR00618 | 1042 | TIGR00618, sbcc, exonuclease SbcC | 4e-04 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 9e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.002 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 0.002 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.004 |
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
Score = 555 bits (1433), Expect = 0.0
Identities = 225/339 (66%), Positives = 264/339 (77%), Gaps = 2/339 (0%)
Query: 161 HNVQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEKLF 220
V+V++RIRP + IE G +CLK+ ++ TLVW HP FTFDH+A +QE +F
Sbjct: 1 PAVKVVVRIRPPNEIEA-DGGQGQCLKKLSSDTLVWHSHPPRMFTFDHVADSNTNQEDVF 59
Query: 221 RVAGLPMVENCLSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFS 280
+ G P+VE+CLSGYN +FAYGQTGSGKTYTMMG + + + G+ PRIFEYLFS
Sbjct: 60 QSVGKPLVEDCLSGYNGSIFAYGQTGSGKTYTMMGPSSSDDESPHGLQGVIPRIFEYLFS 119
Query: 281 RIRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEYN 340
I+ EEE R D LKF CKCSFLEIYNEQITDLL+P+S NL++RED+KKGVYVENLTE
Sbjct: 120 LIQREEEKRGD-GLKFLCKCSFLEIYNEQITDLLDPTSRNLKIREDIKKGVYVENLTEEY 178
Query: 341 VKTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLNLV 400
V + DV ++LL+G +NRK+AAT MNSESSRSH+V TC IES +K S T+ R +RLNLV
Sbjct: 179 VSSYEDVYQVLLKGLSNRKVAATSMNSESSRSHAVFTCTIESWEKKASSTNIRTSRLNLV 238
Query: 401 DLAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLL 460
DLAGSERQK GAEG RLKEA NINKSLSTLG VIM+LVD A GK RHVPYRDS+LTFLL
Sbjct: 239 DLAGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAHGKQRHVPYRDSKLTFLL 298
Query: 461 QDSLGGNSKTTIIANVSPSMCSANETLSTLKFAQRAKLI 499
+DSLGGN+KTTIIANVSPS ETLSTLKFAQRAKLI
Sbjct: 299 RDSLGGNAKTTIIANVSPSSKCFGETLSTLKFAQRAKLI 337
|
Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 337 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|193187 pfam12711, Kinesin-relat_1, Kinesin motor | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|219083 pfam06548, Kinesin-related, Kinesin-related | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2159 | |||
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| PF12711 | 86 | Kinesin-relat_1: Kinesin motor; InterPro: IPR02465 | 99.78 | |
| PF06548 | 488 | Kinesin-related: Kinesin-related; InterPro: IPR010 | 99.75 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.13 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.99 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 98.85 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.8 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 98.73 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 98.73 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 98.68 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 98.46 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.46 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 98.42 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 98.42 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 98.4 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 98.32 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 98.17 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 98.16 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.1 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 97.95 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 97.77 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 97.61 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.54 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 97.43 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 97.42 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 97.37 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 97.15 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 97.11 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.06 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 97.03 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 96.95 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 96.87 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 96.82 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.56 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.56 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.5 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.4 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.37 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.33 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 96.14 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.87 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 95.84 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.83 | |
| PRK11637 | 428 | AmiB activator; Provisional | 95.81 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 95.8 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 95.63 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.62 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 95.61 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.41 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.9 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 94.8 | |
| PRK11637 | 428 | AmiB activator; Provisional | 94.72 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 94.67 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 94.45 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 94.19 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 94.02 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 93.72 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 93.66 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 93.62 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 93.62 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 93.58 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 93.36 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 93.17 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.1 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 92.95 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 92.78 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 92.62 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 92.59 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 92.11 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 92.04 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 91.67 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 91.55 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 91.53 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 91.26 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 91.12 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 90.9 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 90.42 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 90.4 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 89.76 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 89.7 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 89.61 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 89.56 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 89.12 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 89.1 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 88.82 | |
| PRK06526 | 254 | transposase; Provisional | 88.68 | |
| PRK06620 | 214 | hypothetical protein; Validated | 88.26 | |
| PRK09039 | 343 | hypothetical protein; Validated | 88.11 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 88.01 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 87.88 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 87.72 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 87.16 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 86.74 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 86.71 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 86.36 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 86.34 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 86.3 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 86.28 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 86.21 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 86.04 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 85.96 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 85.88 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 85.77 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 85.47 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 85.33 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 85.32 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 85.11 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.1 | |
| PRK09087 | 226 | hypothetical protein; Validated | 84.83 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 84.03 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 83.63 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 83.51 | |
| PRK12377 | 248 | putative replication protein; Provisional | 83.41 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 83.29 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 82.44 | |
| PRK08727 | 233 | hypothetical protein; Validated | 82.29 | |
| PRK08181 | 269 | transposase; Validated | 82.18 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 82.16 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 82.1 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 81.67 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 81.59 | |
| KOG0992 | 613 | consensus Uncharacterized conserved protein [Funct | 81.24 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 81.04 | |
| cd00046 | 144 | DEXDc DEAD-like helicases superfamily. A diverse f | 81.0 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 80.89 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 80.63 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 80.51 | |
| PRK08116 | 268 | hypothetical protein; Validated | 80.48 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 80.43 | |
| TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family. Many pro | 80.4 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 80.31 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 80.2 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 80.11 |
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-105 Score=1005.83 Aligned_cols=559 Identities=47% Similarity=0.747 Sum_probs=473.1
Q ss_pred CCCceEEEEEeCCCCChhcccCCceeEEecCCCceEEEcCCCCceeEeceecCCCCChHHHHHhhchhHHHHhhcCCCce
Q 000113 159 KDHNVQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEKLFRVAGLPMVENCLSGYNSC 238 (2159)
Q Consensus 159 ~d~nVrV~VRVRPls~~E~~s~g~~~cv~~~s~~tiv~~g~p~~~FtFD~VFde~aSQEeVFe~v~~PLV~~vLeGyN~T 238 (2159)
.+.+|+|+|||||++..|. +...+... ....+.+. ...|+||+||+++++|++||+.++.|+|+++|+|||+|
T Consensus 96 ~ds~VkV~VRVRPl~~~E~---g~~iV~~~-s~dsl~I~---~qtFtFD~VFdp~aTQedVFe~vv~PLV~svLdGyNaT 168 (1320)
T PLN03188 96 SDSGVKVIVRMKPLNKGEE---GEMIVQKM-SNDSLTIN---GQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSS 168 (1320)
T ss_pred CCCCeEEEEEcCCCCCccC---CCeeEEEc-CCCeEEEe---CcEEeCCeeeCCCCCHHHHHHHHHHHHHHHHhcCCcce
Confidence 3779999999999998753 33334333 34444443 35799999999999999999999999999999999999
Q ss_pred eEeecccCCCcceeeccccccc--cCCCCCCCCChhHHHHHHHHHHHHHHhhhccccceEEEEEeeeeeecccccccCCC
Q 000113 239 MFAYGQTGSGKTYTMMGEINEV--EGKLNDDCGITPRIFEYLFSRIRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEP 316 (2159)
Q Consensus 239 IFAYGQTGSGKTYTM~G~~~~~--~g~~~e~~GIIPRale~LF~~I~~eee~~~~~~~~fsVkvSflEIYNEkI~DLL~p 316 (2159)
|||||||||||||||+|+.+.. ......++|||||++++||.+|........+..+.|.|+|||+|||||+|||||+|
T Consensus 169 IFAYGQTGSGKTYTM~G~~~~~~de~~s~~e~GIIPRaledLF~~I~e~q~k~~d~~~~y~V~vSyLEIYNEkI~DLLsp 248 (1320)
T PLN03188 169 VFAYGQTGSGKTYTMWGPANGLLEEHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIYNEQITDLLDP 248 (1320)
T ss_pred eecCCCCCCCCCEeeCCCCCcccccccccccCCchHHHHHHHHHHHHhhhhhccccccceEEEEEEEeeecCcceecccc
Confidence 9999999999999999975321 11224678999999999999997544444456788999999999999999999999
Q ss_pred CCCCceeeecCCCCEEEeCcEEEEeCCHHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEeeecC--CCccceeE
Q 000113 317 SSTNLQLREDLKKGVYVENLTEYNVKTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEK--DSMTHFRF 394 (2159)
Q Consensus 317 ~s~~L~IrED~k~Gv~VkgLTEv~VsS~eE~l~LL~~G~~nR~vAsT~mN~~SSRSHsIFTI~Ie~~~~~--~~~t~~r~ 394 (2159)
...++.|++|+++|+||.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+.... ++....+.
T Consensus 249 ~~k~L~IRED~kgGv~VeGLTEv~V~S~ED~l~LL~~G~~nR~tasT~mN~~SSRSHaIFtI~Ves~~k~~~dg~ss~r~ 328 (1320)
T PLN03188 249 SQKNLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSVADGLSSFKT 328 (1320)
T ss_pred ccCCceEEEcCCCCeEeCCCeEEeCCCHHHHHHHHHHHhccceeccCCCCCccCCCceeEEEEEEEeecccCCCCcceEE
Confidence 9889999999999999999999999999999999999999999999999999999999999999876432 33445678
Q ss_pred eEeEeeeccCCccccCCcChhhHHHHHHHhhhhhHHHHHHHHHHhhhc-CCCCCCccCCcchhhHHhhhhcCCCccEEEE
Q 000113 395 ARLNLVDLAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSA-QGKHRHVPYRDSRLTFLLQDSLGGNSKTTII 473 (2159)
Q Consensus 395 SKL~LVDLAGSER~kkTgaeG~RLkEa~nINKSLsaLG~VI~ALae~a-~~K~~HVPYRDSKLTrLLQDSLGGNSKT~MI 473 (2159)
|+|+|||||||||.+.+++.|.|++||++||+||++||+||.+|++.+ .++..||||||||||+||||||||||+|+||
T Consensus 329 SkLnLVDLAGSER~kkTga~G~RLkEA~~INKSLsaLGnVI~ALae~Sq~gk~~HIPYRDSKLTrLLQDSLGGNSKTvMI 408 (1320)
T PLN03188 329 SRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMV 408 (1320)
T ss_pred EEEEEEECCCchhccccCcccHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcCCCCcchHHHHHHHhcCCCceEEEE
Confidence 999999999999999999999999999999999999999999998754 4567899999999999999999999999999
Q ss_pred EeeCCCCCCHHHHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHHHHHHHHHHHhcCccCCC-------------
Q 000113 474 ANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQQLKDKLSSLMKHQNLLRSP------------- 540 (2159)
Q Consensus 474 a~VSPs~~n~eETLSTLrFAqRAK~IkN~~~VNed~s~~v~~L~~eIq~LK~eL~~l~~~~~~~~s~------------- 540 (2159)
|||||+..++.||++||+||+|||.|+|+|++|.....++..|+..|.+|+.+|.+++...+.+..+
T Consensus 409 a~VSPs~~~~eETLSTLrFAsRAK~IKNkpvvNe~~~~~vn~LrelIr~Lk~EL~rLK~~~~~p~~~n~~y~t~~~~r~s 488 (1320)
T PLN03188 409 CAISPSQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNFLREVIRQLRDELQRVKANGNNPTNPNVAYSTAWNARRS 488 (1320)
T ss_pred EecCCchhhHHHHHHHHHHHHHHhhcCccceeccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccchhHHHH
Confidence 9999999999999999999999999999999999988888889999999999999998764433210
Q ss_pred -----C--CCC----C---cCC----CCCcccccc---------------------------------------------
Q 000113 541 -----S--SST----P---EVG----ESSQGDIIK--------------------------------------------- 557 (2159)
Q Consensus 541 -----~--~~~----~---e~~----~~~~~~~~~--------------------------------------------- 557 (2159)
. ... | ..+ ..++.++..
T Consensus 489 l~~l~~~~l~~~~~lp~i~~d~~~~m~ide~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1320)
T PLN03188 489 LNLLKSFGLGPPPSLPHVDEDGDEEMEIDEEAVERLCVQVGLQPAGAAEGNNVDMGRVESIHSSDQQSIIKQGSEDTDVD 568 (1320)
T ss_pred HHHHHhccCCCCcCCCccccccchhhhcchhHHHHHHHHhcccchhHHHHHHHhhhcccccccccchhhhcccccccchh
Confidence 0 000 0 000 000000000
Q ss_pred --------------------------------------------------------------------------------
Q 000113 558 -------------------------------------------------------------------------------- 557 (2159)
Q Consensus 558 -------------------------------------------------------------------------------- 557 (2159)
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (1320)
T PLN03188 569 MEEAISEQEEKHEITIVDCAEPVRNTQNSLQIDTLDHESSEQPLEEKNALHSSVSKLNTEESPSKMVEIRPSCQDSVSES 648 (1320)
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCccccccccc
Confidence
Q ss_pred -------------------------------cc--------C--------------------------------------
Q 000113 558 -------------------------------KY--------S-------------------------------------- 560 (2159)
Q Consensus 558 -------------------------------~~--------~-------------------------------------- 560 (2159)
.+ +
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lsi~p~~~~~~l~~p~~s~sp~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1320)
T PLN03188 649 GVSTGVSVADESNDSENELVNCASPSSLSIVPVEVSPVLKSPTLSVSPRIRNSRKSLRTSSMLTASQKDSEDESKLTPED 728 (1320)
T ss_pred cccccccccccccccccccccCCCccccccccccccccccCCccccCCCcccchhhhhhhcccccccchhcccccccccc
Confidence 00 0
Q ss_pred --------------------------CCCCC----------ccc--------------------------------ccc-
Q 000113 561 --------------------------FPGEG----------MMD--------------------------------NGV- 571 (2159)
Q Consensus 561 --------------------------~~~~~----------~~~--------------------------------~~~- 571 (2159)
.|.+. +++ +++
T Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~t~~laasl~rgl~ii~~h~~~~~~~rss~~~s~~~~~~~~~~~~~k~~~~vq 808 (1320)
T PLN03188 729 AEPSFAKSMKNNSSSALSTQKSKSFLAPTEHLAASLHRGLEIIDSHRQSSALRRSSFRFSFKPADSKPITLVSKADVGVQ 808 (1320)
T ss_pred cccchhhhhhcccccccccccccccCCchHHHHHHHhcchHHHhhcccCchhhccceecccccccccccccccccchhhh
Confidence 00000 000 000
Q ss_pred --------------------------------hh-----------------hhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000113 572 --------------------------------QN-----------------VQNEKTKRLECMLLGSLRREKMAEAVTQK 602 (2159)
Q Consensus 572 --------------------------------~~-----------------~~~~k~k~lE~~L~~alrre~~~E~e~~k 602 (2159)
.+ ....-.+..++.|++++||++..+..|.+
T Consensus 809 ~~~~~~~~~~~~~~~~lc~~c~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~k~~~kvl~~a~~re~~le~~c~~ 888 (1320)
T PLN03188 809 TLPQADEISEENSKEFLCSNCKCRTQLDAKDADDSSNLQLVPVDGSESAEKSKKQVPKAVEKVLAGAIRREMALEEFCTK 888 (1320)
T ss_pred cccccccccccccchhcccccccccccccccccccccceeeeccCcccccchhhhhhhHHHHHHHHHHHHHHHHHHhhHH
Confidence 00 00001456788999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhHHHHHHHHHHHHHHHHHhhhhChHHHHHHHH
Q 000113 603 LEAEIEHMNRLLCQREEDTQHTKMMLRFREEKIKQLELLVNGSVTAEKYLMDENIALKEEIQLLQARIDRNPELTRFALE 682 (2159)
Q Consensus 603 leeeie~ln~Ll~qkee~~q~sk~~lklree~i~~lE~l~s~~l~~E~~L~~En~~lk~Ei~~Lq~~~d~~~Ev~~~~~E 682 (2159)
..++|++|++||+|++++.+++..+-..|+++|.|||.+.+|.++.|.++.+|..+|..|.+.|+.+|++||||.+..+|
T Consensus 889 qa~~i~ql~~lv~qyk~e~~~~~~~~~~~~~ki~~l~~~~dg~l~~~~~~~~~~~~~~~~~~~~~~~y~~~p~~~~~~~e 968 (1320)
T PLN03188 889 QASEITQLNRLVQQYKHERECNAIIGQTREDKIIRLESLMDGVLSKEDFLEEELASLMHEHKLLKEKYENHPEVLRTKIE 968 (1320)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHhhhhhhhHHHHhhhcccccchhhhhhhhhhhhhhhHHHHHHHhhcChhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhccc
Q 000113 683 NIRLLEQLQLFQSFYEQGEREKLLAELAELRDQLLDIVEGKE 724 (2159)
Q Consensus 683 n~~L~eel~~~~~f~~~gere~l~~ei~~Lr~ql~~~~~~~~ 724 (2159)
++++++++.+|++|||+||||+||+||+.||+||.++++.-+
T Consensus 969 ~~~~~~e~~~~~~~~d~~ErEvll~eI~dlr~qL~~~~d~s~ 1010 (1320)
T PLN03188 969 LKRVQDELEHYRNFYDMGEREVLLEEIQDLRSQLQYYIDSSL 1010 (1320)
T ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999977664
|
|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >PF12711 Kinesin-relat_1: Kinesin motor; InterPro: IPR024658 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >PF06548 Kinesin-related: Kinesin-related; InterPro: IPR010544 This entry represents a domain within kinesin-related proteins from higher plants | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08181 transposase; Validated | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0992 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >cd00046 DEXDc DEAD-like helicases superfamily | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR01242 26Sp45 26S proteasome subunit P45 family | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 2159 | ||||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-72 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-71 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 1e-70 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 1e-69 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 5e-68 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 1e-67 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-67 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-67 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-67 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 1e-64 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 2e-64 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 3e-64 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 3e-64 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 3e-64 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 3e-64 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 3e-64 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 4e-64 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-63 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 4e-63 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 3e-62 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 4e-62 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 1e-61 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 1e-61 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 9e-58 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-57 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-56 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 2e-56 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 2e-55 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 2e-54 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-54 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 4e-54 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 7e-51 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 5e-50 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 1e-49 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 1e-49 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 3e-49 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 6e-49 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 9e-49 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-48 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 4e-47 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 9e-47 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 2e-46 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 3e-46 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 4e-46 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-45 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-45 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-45 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 7e-43 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 7e-43 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-42 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-39 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 5e-39 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 5e-38 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 1e-37 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-32 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 2e-29 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-18 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 5e-18 |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
|
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
Score = 516 bits (1332), Expect = e-167
Identities = 146/372 (39%), Positives = 213/372 (57%), Gaps = 18/372 (4%)
Query: 159 KDHNVQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEK 218
+ +++V+ R RPL++ E+ G +K + + FD + SQEK
Sbjct: 9 AEDSIKVVCRFRPLNDSEE-KAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEK 67
Query: 219 LFRVAGLPMVENCLSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYL 278
++ A +V + L+GYN +FAYGQT SGKT+TM G I + + GI PRI +
Sbjct: 68 VYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGD-----SVKQGIIPRIVNDI 122
Query: 279 FSRIRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTE 338
F+ I E N +F K S+ EIY ++I DLL+ S NL + ED + YV+ TE
Sbjct: 123 FNHIYAMEVNL-----EFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATE 177
Query: 339 YNVKTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLN 398
V + DV +++ +G +NR +A T MN SSRSHSV ++ ++ +L
Sbjct: 178 RFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQ--KKLSGKLY 235
Query: 399 LVDLAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTF 458
LVDLAGSE+ +GAEG L EA NINKSLS LG VI +L D G H+PYRDS+LT
Sbjct: 236 LVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALAD---GNKTHIPYRDSKLTR 292
Query: 459 LLQDSLGGNSKTTIIANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQR 518
+LQ+SLGGN++TTI+ SP+ + +ET STL F +RAK ++N VNE + + +R
Sbjct: 293 ILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAE--EWKR 350
Query: 519 QIQQLKDKLSSL 530
+ ++ K+K + L
Sbjct: 351 RYEKEKEKNARL 362
|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2159 | |||
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.95 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.94 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 99.9 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 97.78 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 97.61 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 91.44 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 91.02 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 90.91 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 89.95 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 89.28 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 87.03 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 86.23 | |
| 4b4t_M | 434 | 26S protease regulatory subunit 6A; hydrolase, AAA | 86.2 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 86.1 | |
| 4b4t_K | 428 | 26S protease regulatory subunit 6B homolog; hydrol | 84.47 | |
| 3t15_A | 293 | Ribulose bisphosphate carboxylase/oxygenase activ | 84.16 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 84.02 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 83.52 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 83.29 | |
| 4b4t_L | 437 | 26S protease subunit RPT4; hydrolase, AAA-atpases, | 81.34 | |
| 4b4t_J | 405 | 26S protease regulatory subunit 8 homolog; hydrola | 80.79 | |
| 4b4t_I | 437 | 26S protease regulatory subunit 4 homolog; hydrola | 80.77 | |
| 1l8q_A | 324 | Chromosomal replication initiator protein DNAA; AA | 80.22 | |
| 3bos_A | 242 | Putative DNA replication factor; P-loop containing | 80.18 |
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-90 Score=818.54 Aligned_cols=351 Identities=41% Similarity=0.601 Sum_probs=287.7
Q ss_pred CCCceEEEEEeCCCCChhcccCCceeEEecCC---CceEEEcCCCCceeEeceecCCCCChHHHHHhhchhHHHHhhcCC
Q 000113 159 KDHNVQVLIRIRPLSNIEKVSQGYVRCLKQDT---AQTLVWLGHPETRFTFDHIACEMISQEKLFRVAGLPMVENCLSGY 235 (2159)
Q Consensus 159 ~d~nVrV~VRVRPls~~E~~s~g~~~cv~~~s---~~tiv~~g~p~~~FtFD~VFde~aSQEeVFe~v~~PLV~~vLeGy 235 (2159)
.++||+|+|||||+++.|... +...|+..++ ..++.. ..+.|+||+||+++++|++||+.++.|+|+++|+||
T Consensus 9 ~~~~i~V~vRvRP~~~~E~~~-~~~~~v~~~~~~~~~~i~~---~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~ 84 (365)
T 2y65_A 9 AEDSIKVVCRFRPLNDSEEKA-GSKFVVKFPNNVEENCISI---AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGY 84 (365)
T ss_dssp CEEECEEEEEECCCCHHHHHT-TCCBCEECCSSSTTCEEEE---TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTC
T ss_pred CCCCeEEEEEcCcCChhHhcc-CCceEEEeCCCCCCcEEEE---CCEEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCC
Confidence 478999999999999988643 3344555443 233332 235799999999999999999999999999999999
Q ss_pred CceeEeecccCCCcceeeccccccccCCCCCCCCChhHHHHHHHHHHHHHHhhhccccceEEEEEeeeeeecccccccCC
Q 000113 236 NSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSRIRMEEENRRDERLKFSCKCSFLEIYNEQITDLLE 315 (2159)
Q Consensus 236 N~TIFAYGQTGSGKTYTM~G~~~~~~g~~~e~~GIIPRale~LF~~I~~eee~~~~~~~~fsVkvSflEIYNEkI~DLL~ 315 (2159)
|+||||||||||||||||+|+..+ +..+|||||++++||..+.. ....+.|.|+|||+|||||+|||||+
T Consensus 85 n~tifAYGqTGSGKTyTm~G~~~~-----~~~~Giipr~~~~lF~~i~~-----~~~~~~~~v~vS~~EIYnE~i~DLL~ 154 (365)
T 2y65_A 85 NGTIFAYGQTSSGKTHTMEGVIGD-----SVKQGIIPRIVNDIFNHIYA-----MEVNLEFHIKVSYYEIYMDKIRDLLD 154 (365)
T ss_dssp CEEEEEECSTTSSHHHHHTBSTTC-----TTTBCHHHHHHHHHHHHHHH-----CCSCEEEEEEEEEEEEETTEEEETTC
T ss_pred ceEEEeecCCCCCCceEEecCCCC-----cccCChHHHHHHHHHHHHHh-----ccCCceEEEEEEEEEEECCeeeeccc
Confidence 999999999999999999997432 35689999999999999853 24568999999999999999999999
Q ss_pred CCCCCceeeecCCCCEEEeCcEEEEeCCHHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEeeecCCCccceeEe
Q 000113 316 PSSTNLQLREDLKKGVYVENLTEYNVKTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFA 395 (2159)
Q Consensus 316 p~s~~L~IrED~k~Gv~VkgLTEv~VsS~eE~l~LL~~G~~nR~vAsT~mN~~SSRSHsIFTI~Ie~~~~~~~~t~~r~S 395 (2159)
+...++.+++|+.+++||.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+...... ....|
T Consensus 155 ~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~--~~~~s 232 (365)
T 2y65_A 155 VSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQ--KKLSG 232 (365)
T ss_dssp TTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTC--CEEEE
T ss_pred CCcCCceEEECCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCC--CEeEE
Confidence 9989999999999999999999999999999999999999999999999999999999999999987654332 34679
Q ss_pred EeEeeeccCCccccCCcChhhHHHHHHHhhhhhHHHHHHHHHHhhhcCCCCCCccCCcchhhHHhhhhcCCCccEEEEEe
Q 000113 396 RLNLVDLAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQDSLGGNSKTTIIAN 475 (2159)
Q Consensus 396 KL~LVDLAGSER~kkTgaeG~RLkEa~nINKSLsaLG~VI~ALae~a~~K~~HVPYRDSKLTrLLQDSLGGNSKT~MIa~ 475 (2159)
+|+|||||||||.+++++.|.|++||++||+||++||+||.||++ ++..|||||||||||||||||||||+|+||||
T Consensus 233 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~---~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~ 309 (365)
T 2y65_A 233 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALAD---GNKTHIPYRDSKLTRILQESLGGNARTTIVIC 309 (365)
T ss_dssp EEEEEECCCCCC----------------CCHHHHHHHHHHHHHHH---CCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEE
T ss_pred EEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCccccCHHHHHHHhhcCCCccEEEEEE
Confidence 999999999999999999999999999999999999999999986 34579999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHHHHHHHHH
Q 000113 476 VSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQQLKDKLSSL 530 (2159)
Q Consensus 476 VSPs~~n~eETLSTLrFAqRAK~IkN~~~VNed~s~~v~~L~~eIq~LK~eL~~l 530 (2159)
|||+..+++||++||+||+|||.|+|+|++|++++.. .+.+.+++.++++.+|
T Consensus 310 isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~--~~~~~~~~e~~~~~~L 362 (365)
T 2y65_A 310 CSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAE--EWKRRYEKEKEKNARL 362 (365)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSH--HHHHC-----------
T ss_pred ecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHH--HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999987653 3444444444444444
|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* | Back alignment and structure |
|---|
| >3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 2159 | ||||
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 3e-81 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 6e-80 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 6e-76 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 2e-74 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 4e-69 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-68 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 4e-68 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 3e-66 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-58 |
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Neurospora crassa [TaxId: 5141]
Score = 270 bits (690), Expect = 3e-81
Identities = 152/365 (41%), Positives = 213/365 (58%), Gaps = 16/365 (4%)
Query: 162 NVQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWLGHPETRFTFDHIACEMISQEKLFR 221
+++V+ R RP + +E S G Q V + FTFD + Q +F
Sbjct: 6 SIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFD 65
Query: 222 VAGLPMVENCLSGYNSCMFAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSR 281
+ P V++ L+GYN +FAYGQTG+GK+YTMMG + D G+ PRI E +F+
Sbjct: 66 FSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDP----DGRGVIPRIVEQIFTS 121
Query: 282 IRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEYNV 341
I N +++ + S++EIY E+I DLL P + NL + E+ +GVYV+ L E V
Sbjct: 122 ILSSAANI-----EYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIYV 176
Query: 342 KTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFARLNLVD 401
+V +V +++ +G R +AAT MN ESSRSHS+ I + + +L LVD
Sbjct: 177 SSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSA--KSGQLFLVD 234
Query: 402 LAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQ 461
LAGSE+ +GA G L+EA INKSLS LG+VI +L GK HVPYRDS+LT +LQ
Sbjct: 235 LAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALT---DGKSSHVPYRDSKLTRILQ 291
Query: 462 DSLGGNSKTTIIANVSPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQ 521
+SLGGNS+TT+I N SPS + ETLSTL+F RAK I+N AKVN S L++ +
Sbjct: 292 ESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELS--PAELKQMLA 349
Query: 522 QLKDK 526
+ K +
Sbjct: 350 KAKTQ 354
|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2159 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 92.57 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 90.26 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 88.22 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 82.71 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 82.33 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=1.3e-81 Score=740.06 Aligned_cols=345 Identities=36% Similarity=0.610 Sum_probs=291.9
Q ss_pred ceEEEEEeCCCCChhcccCCceeEEecCCCceEEEc--CCCCceeEeceecCCCCChHHHHHhhchhHHHHhhcCCCcee
Q 000113 162 NVQVLIRIRPLSNIEKVSQGYVRCLKQDTAQTLVWL--GHPETRFTFDHIACEMISQEKLFRVAGLPMVENCLSGYNSCM 239 (2159)
Q Consensus 162 nVrV~VRVRPls~~E~~s~g~~~cv~~~s~~tiv~~--g~p~~~FtFD~VFde~aSQEeVFe~v~~PLV~~vLeGyN~TI 239 (2159)
.|+|+|||||+++.|.... ...++...+..++... +.+...|+||+||+++++|++||+.+ .|+|+++|+|||+||
T Consensus 1 rIkV~vRvRP~~~~E~~~~-~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v-~~lv~~~l~G~n~~i 78 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAK-ERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDT-KYLVQSAVDGYNVCI 78 (364)
T ss_dssp CCEEEEEECCCCHHHHHTT-CCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTT-THHHHHHHTTCEEEE
T ss_pred CeEEEEEcCCCChhhcccC-CCCeEEeCCCCeEEecCCCCCceEEECCeecCCCCCHHHHHHHH-HHHHHHHhcCCceee
Confidence 4899999999998886443 3345555555554433 22346799999999999999999985 799999999999999
Q ss_pred EeecccCCCcceeeccccccccCCCCCCCCChhHHHHHHHHHHHHHHhhhccccceEEEEEeeeeeecccccccCCCCC-
Q 000113 240 FAYGQTGSGKTYTMMGEINEVEGKLNDDCGITPRIFEYLFSRIRMEEENRRDERLKFSCKCSFLEIYNEQITDLLEPSS- 318 (2159)
Q Consensus 240 FAYGQTGSGKTYTM~G~~~~~~g~~~e~~GIIPRale~LF~~I~~eee~~~~~~~~fsVkvSflEIYNEkI~DLL~p~s- 318 (2159)
||||||||||||||+|+ ..++|||||++.+||..+... .....|.|++||+|||||+|||||.|..
T Consensus 79 ~aYGqTGSGKTyTm~G~--------~~~~Giipr~~~~lf~~i~~~-----~~~~~~~v~~S~~EIyne~i~DLL~~~~~ 145 (364)
T d1sdma_ 79 FAYGQTGSGKTFTIYGA--------DSNPGLTPRAMSELFRIMKKD-----SNKFSFSLKAYMVELYQDTLVDLLLPKQA 145 (364)
T ss_dssp EEECSTTSSHHHHHTBC--------SSSBCHHHHHHHHHHHHHHHG-----GGTEEEEEEEEEEEESSSCEEETTSCTTS
T ss_pred eccccCCCCcccccccC--------ccccchhHHHHHHHHhhhhhc-----cccccceEEEEEEEEeccccccccCcccc
Confidence 99999999999999997 457899999999999998542 3457899999999999999999998765
Q ss_pred --CCceeeecCCCCEEEeCcEEEEeCCHHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEeeecCCCccceeEeE
Q 000113 319 --TNLQLREDLKKGVYVENLTEYNVKTVNDVVKLLLQGAANRKMAATYMNSESSRSHSVLTCIIESHWEKDSMTHFRFAR 396 (2159)
Q Consensus 319 --~~L~IrED~k~Gv~VkgLTEv~VsS~eE~l~LL~~G~~nR~vAsT~mN~~SSRSHsIFTI~Ie~~~~~~~~t~~r~SK 396 (2159)
..+.+++|+.+|++|.|++++.|.|++|++.+|..|..+|++++|.+|..|||||+||++.|.+...... ....|+
T Consensus 146 ~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~--~~~~~k 223 (364)
T d1sdma_ 146 KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQ--AIARGK 223 (364)
T ss_dssp CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTC--CEEEEE
T ss_pred cccccceeecccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCcc--eeeeEE
Confidence 3578899999999999999999999999999999999999999999999999999999999988765433 356799
Q ss_pred eEeeeccCCccccCCcChhhHHHHHHHhhhhhHHHHHHHHHHhhhcCCCCCCccCCcchhhHHhhhhcCCCccEEEEEee
Q 000113 397 LNLVDLAGSERQKSSGAEGDRLKEAANINKSLSTLGLVIMSLVDSAQGKHRHVPYRDSRLTFLLQDSLGGNSKTTIIANV 476 (2159)
Q Consensus 397 L~LVDLAGSER~kkTgaeG~RLkEa~nINKSLsaLG~VI~ALae~a~~K~~HVPYRDSKLTrLLQDSLGGNSKT~MIa~V 476 (2159)
|+|||||||||..++++.|.+++|+.+||+||++||+||.+|++. ..|||||+||||+||+|+|||||+|+|||||
T Consensus 224 l~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~----~~~ipyR~SkLT~lL~d~Lggns~t~~I~~i 299 (364)
T d1sdma_ 224 LSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSG----NQHIPYRNHKLTMLMSDSLGGNAKTLMFVNI 299 (364)
T ss_dssp EEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHT----CSCCCGGGCHHHHHTTTTTTSSSEEEEEEEE
T ss_pred EEeechhhccccccccccCceeeeccccccchhhHHHHHHHHHcC----CCcCCchhhhhhHHHHhhcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999999999763 4699999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHHHHHHH
Q 000113 477 SPSMCSANETLSTLKFAQRAKLIQNNAKVNENASGDVTALQRQIQQLKDKLS 528 (2159)
Q Consensus 477 SPs~~n~eETLSTLrFAqRAK~IkN~~~VNed~s~~v~~L~~eIq~LK~eL~ 528 (2159)
||+..+++||++||+||+|||.|+|+|++|.... .+..|+.+|..|+.++.
T Consensus 300 sp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~~-~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 300 SPAESNLDETHNSLTYASRVRSIVNDPSKNVSSK-EVARLKKLVSYWKEQAG 350 (364)
T ss_dssp CCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEECH-HHHHHHTTTTCC-----
T ss_pred CCCcchHHHHHHHHHHHHHHhhcccCCcccCCHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997653 45566666666666553
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|