Citrus Sinensis ID: 000135
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 2087 | 2.2.26 [Sep-21-2011] | |||||||
| P27398 | 1594 | Calpain-D OS=Drosophila m | yes | no | 0.141 | 0.185 | 0.376 | 1e-53 | |
| P97571 | 713 | Calpain-1 catalytic subun | yes | no | 0.156 | 0.457 | 0.360 | 2e-53 | |
| O35350 | 713 | Calpain-1 catalytic subun | yes | no | 0.156 | 0.457 | 0.360 | 2e-53 | |
| Q9D805 | 690 | Calpain-9 OS=Mus musculus | no | no | 0.152 | 0.462 | 0.357 | 2e-53 | |
| Q92177 | 810 | Calpain-3 OS=Gallus gallu | no | no | 0.163 | 0.420 | 0.337 | 4e-53 | |
| Q5NVS7 | 714 | Calpain-1 catalytic subun | no | no | 0.156 | 0.456 | 0.360 | 1e-52 | |
| A6NHC0 | 703 | Calpain-8 OS=Homo sapiens | no | no | 0.154 | 0.458 | 0.378 | 2e-52 | |
| P07384 | 714 | Calpain-1 catalytic subun | no | no | 0.156 | 0.456 | 0.360 | 2e-52 | |
| O35920 | 690 | Calpain-9 OS=Rattus norve | no | no | 0.152 | 0.462 | 0.349 | 2e-52 | |
| Q9GLG2 | 714 | Calpain-1 catalytic subun | N/A | no | 0.156 | 0.457 | 0.350 | 3e-52 |
| >sp|P27398|CAND_DROME Calpain-D OS=Drosophila melanogaster GN=sol PE=1 SV=2 | Back alignment and function desciption |
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Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 180/311 (57%), Gaps = 15/311 (4%)
Query: 1706 FTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQ 1765
F D FPP +SLY +P + + V +W RP EI + +F + PSD+CQ
Sbjct: 1015 FVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCDGGAYPPWAVFRTPL-PSDICQ 1073
Query: 1766 GRLGDCWFLSAVAVLTEVSQ-ISEVIITPEYNEEGIYTVRFCIQGEWVPVVVDDWIPCES 1824
G LG+CW LSA+AVL E + EV++T E +G Y VR C G+W V+VDD +PC+
Sbjct: 1074 GVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQGAYQVRLCKDGKWTTVLVDDLLPCDK 1133
Query: 1825 PGKPAFATSKKGHELWVSILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQ 1884
G ++ +K+ +LWV ++EKA AK+HG YEAL G + L LTG E I ++++
Sbjct: 1134 RGHLVYSQAKR-KQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASS 1192
Query: 1885 ----AQIDLASGRLWSQLLRFKQEGFLLGAGSPSGS----DVHISSSGIVQGHAYSILQV 1936
++ +L +W+QLL + FL+GA G+ + G+ HAYS+L V
Sbjct: 1193 LPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDV 1252
Query: 1937 REVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQ-SKDGIFWMSWQDFQ 1995
+++ GH+L+++RNPW + W G WSD S WTD ++ L +P + +G+FW+S++D
Sbjct: 1253 KDIQGHRLLKLRNPWGH-YSWRGDWSDDSSLWTDDLRDAL--MPHGASEGVFWISFEDVL 1309
Query: 1996 IHFRSIYVCRV 2006
+F I +C+V
Sbjct: 1310 NYFDCIDICKV 1320
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Calcium-regulated non-lysosomal thiol-protease. Drosophila melanogaster (taxid: 7227) EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: - |
| >sp|P97571|CAN1_RAT Calpain-1 catalytic subunit OS=Rattus norvegicus GN=Capn1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O35350|CAN1_MOUSE Calpain-1 catalytic subunit OS=Mus musculus GN=Capn1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9D805|CAN9_MOUSE Calpain-9 OS=Mus musculus GN=Capn9 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q92177|CAN3_CHICK Calpain-3 OS=Gallus gallus GN=CAPN3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5NVS7|CAN1_PONAB Calpain-1 catalytic subunit OS=Pongo abelii GN=CAPN1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A6NHC0|CAN8_HUMAN Calpain-8 OS=Homo sapiens GN=CAPN8 PE=2 SV=3 | Back alignment and function description |
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| >sp|P07384|CAN1_HUMAN Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O35920|CAN9_RAT Calpain-9 OS=Rattus norvegicus GN=Capn9 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9GLG2|CAN1_MACFA Calpain-1 catalytic subunit OS=Macaca fascicularis GN=CAPN1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2087 | ||||||
| 255564850 | 2158 | calpain, putative [Ricinus communis] gi| | 0.985 | 0.953 | 0.885 | 0.0 | |
| 225435770 | 2159 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.952 | 0.862 | 0.0 | |
| 449493556 | 2162 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.986 | 0.951 | 0.852 | 0.0 | |
| 449452785 | 2173 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.947 | 0.840 | 0.0 | |
| 356528400 | 2151 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.951 | 0.843 | 0.0 | |
| 356511025 | 2177 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.940 | 0.836 | 0.0 | |
| 22330261 | 2151 | calpain-type cysteine protease [Arabidop | 0.981 | 0.952 | 0.816 | 0.0 | |
| 297853240 | 2151 | hypothetical protein ARALYDRAFT_892532 [ | 0.981 | 0.952 | 0.816 | 0.0 | |
| 334183339 | 2179 | calpain-type cysteine protease [Arabidop | 0.981 | 0.939 | 0.805 | 0.0 | |
| 38490651 | 2142 | phytocalpain [Nicotiana benthamiana] | 0.977 | 0.952 | 0.816 | 0.0 |
| >gi|255564850|ref|XP_002523419.1| calpain, putative [Ricinus communis] gi|223537369|gb|EEF38998.1| calpain, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 3630 bits (9414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1825/2060 (88%), Positives = 1929/2060 (93%), Gaps = 3/2060 (0%)
Query: 1 MDGDDKGIVLACAISGTLFAVLGSASFSILWAVNWRPWRLYSWIFARKWPNVLQGGQLGI 60
M+GD+ IVLACAISGTLF VLG ASF ILWAVNWRPWR+YSWIFARKWP + QG QLGI
Sbjct: 1 MEGDEHEIVLACAISGTLFTVLGLASFWILWAVNWRPWRIYSWIFARKWPYIFQGPQLGI 60
Query: 61 ICRFLALSAWMVVISPVAVLIMWGSWLIVILGRDIIGLAIIMAGTALLLAFYSIMLWWRT 120
+CRFL+L AWM+VISP+ VL+MWGSWLIVIL R IIGLA+IMAGTALLLAFYSIMLWWRT
Sbjct: 61 VCRFLSLLAWMIVISPIVVLVMWGSWLIVILDRHIIGLAVIMAGTALLLAFYSIMLWWRT 120
Query: 121 QWQSSRAVAVLLLLAVALLCAYELSAVYVTAGSHASDRYSPSGFFFGVSAIALAINMLFI 180
QWQSSRAVA+LL LAVALLCAYEL AVYVTAG AS+RYSPSGFFFGVSAIALAINMLFI
Sbjct: 121 QWQSSRAVAILLFLAVALLCAYELCAVYVTAGKDASERYSPSGFFFGVSAIALAINMLFI 180
Query: 181 CRMVFNGNGLDVDEYVRRAYKFAYPDGIEMGPLACLPEPPDPNELYPRQSSKASHLGLLY 240
CRMVFNGN LDVDEYVRRAYKFAY D IEMGP+ CLPEPPDPNELYPRQSS+ASHLGLLY
Sbjct: 181 CRMVFNGNSLDVDEYVRRAYKFAYSDCIEMGPMPCLPEPPDPNELYPRQSSRASHLGLLY 240
Query: 241 AGSLVVLFVYSILYGLTAMEARWLGAVTSAAVIILDWNMGACLYGFQLLQSRVAALFVAG 300
GSL+VL VYSILYGLTA E RWLGAVTS AVIILDWNMGACLYGF+LLQSRV ALFVAG
Sbjct: 241 LGSLMVLLVYSILYGLTAKEVRWLGAVTSTAVIILDWNMGACLYGFELLQSRVVALFVAG 300
Query: 301 TSRVFLICFGVHYWYLGHCISYAVVASVLLGAAVSRHLSVTNPLAARRDALQSTVIRLRE 360
SRVFLICFGVHYWYLGHCISYAVVASVLLGAAVSRHLSVTNPLAARRDALQSTVIRLRE
Sbjct: 301 ASRVFLICFGVHYWYLGHCISYAVVASVLLGAAVSRHLSVTNPLAARRDALQSTVIRLRE 360
Query: 361 GFRRKEQNSSSSSSEGCGSSVKRSSSAEAAHLGNIIEASSRSAAQCSVDVTTWNNGVLCR 420
GFRRKEQN+SSSSSEGCGSSVKRSSS EA +LGNI+E+ S+ AQC++D W N VLCR
Sbjct: 361 GFRRKEQNTSSSSSEGCGSSVKRSSSVEAGNLGNIVESGSQCTAQCTLDANNWTNAVLCR 420
Query: 421 TASSHEGINSDKSMDSGRPSLALCSSSCRSVVQEPEAGTSFVDKNYDQNNSLVVCNSSGL 480
T S HEGINSD S+DSGRPSLAL SSSCRSVVQEPEAGTS DK++D NNSLVVC+SSGL
Sbjct: 421 TVSCHEGINSDNSIDSGRPSLALRSSSCRSVVQEPEAGTSG-DKHFDHNNSLVVCSSSGL 479
Query: 481 DSQGCDSSTSTSANQQILDLNLALAFQERLNDPRITSMLKKRAREGDRELTSLLQDKGLD 540
DSQGC+SSTS SANQQ+LDLN+ALA Q+RLNDPRITS+LKKRAR+GD+ELTSLLQDKGLD
Sbjct: 480 DSQGCESSTSVSANQQLLDLNIALALQDRLNDPRITSLLKKRARQGDKELTSLLQDKGLD 539
Query: 541 PNFAMMLKEKSLDPTILALLQRSSLDADRDHGDNTDVAVIDSNSVDNVMPNQISLSEELR 600
PNFAMMLKEK+LDPTILALLQRSSLDADRDH +NTD+ ++DSNS DN +PNQISLSEELR
Sbjct: 540 PNFAMMLKEKNLDPTILALLQRSSLDADRDHRENTDITIVDSNSFDNALPNQISLSEELR 599
Query: 601 LRGLEKWLQMSRFVLHKAAGTPERAWVLFSFIFILETISVAIFRPKTIRIINARHQQFEF 660
L GLEKWLQ+SRFVLH AGTPERAWVLFSFIFILETI+VAIFRPKTI+IINA HQQFEF
Sbjct: 600 LHGLEKWLQLSRFVLHHIAGTPERAWVLFSFIFILETIAVAIFRPKTIKIINATHQQFEF 659
Query: 661 GFAVLLLSPVVCSIMAFLRSFRAEEMAMTSKPRKYGFIAWLLSTSVGLLLSFLSKSSLLL 720
GFAVLLLSPVVCSIMAFLRS +AE+MAMTSKPRKYGFIAWLLST VGLLLSFLSKSS+LL
Sbjct: 660 GFAVLLLSPVVCSIMAFLRSLQAEDMAMTSKPRKYGFIAWLLSTCVGLLLSFLSKSSVLL 719
Query: 721 GLSLTVPLMVACLSFAIPIWIRNGYQFKVPQVQCAATPGGNDQPPGKKEGIVLVICITVF 780
GLSLTVPLMVACLS PIW RNGYQF V +VQ A GN +P G KEGIVL+IC+ VF
Sbjct: 720 GLSLTVPLMVACLSVTFPIWARNGYQFWVSRVQSTAH-AGNHRPSGTKEGIVLIICVVVF 778
Query: 781 TGSVLALGAIVSAKPLEDLGYKGWTGEPNSFASPYASSVYLGWLMASAIALVVTGVLPIV 840
TGSVLALGAIVS KPL+DL YKGW +P +SPYASSVYLGW MASAIALVVTGVLPI+
Sbjct: 779 TGSVLALGAIVSVKPLDDLEYKGWASDPRGLSSPYASSVYLGWAMASAIALVVTGVLPII 838
Query: 841 SWFSTYRFSLSSAICVGIFAAVLVAFCGASYLEVVKSREDQVPTKGDFLAALLPLVCIPA 900
SWF+TYRFSLSSA+CVGIF VLVAFCG SY+EVVKSR+DQVPTKGDFLAALLPLVCIPA
Sbjct: 839 SWFATYRFSLSSAVCVGIFTVVLVAFCGVSYVEVVKSRDDQVPTKGDFLAALLPLVCIPA 898
Query: 901 LLSLCSGLLKWKDDDWKLSRGVYVFITIGLVLLLGAISAVIVVITPWTIGVAFLLLLLLI 960
LLSLCSGLLKWKDD WKLSRGVYVF+ IGL+LLLGAISAVIVV+ PWTIGVAFLL+LLLI
Sbjct: 899 LLSLCSGLLKWKDDGWKLSRGVYVFVIIGLLLLLGAISAVIVVVNPWTIGVAFLLVLLLI 958
Query: 961 VLAIGVIHHWASNNFYLTRTQMFFVCFLAFLLGLAAFLVGWFDDKPFVGASVGYFTFLFL 1020
VLAIGVIHHWASNNFYLTRTQMFFVCFLAFLLGLAAFLVGWF KPFVGASVGYFTFLFL
Sbjct: 959 VLAIGVIHHWASNNFYLTRTQMFFVCFLAFLLGLAAFLVGWFQGKPFVGASVGYFTFLFL 1018
Query: 1021 LAGRALTVLLSPPIVVYSPRVLPVYVYDAHADCGKNVSVAFLVLYGVALAIEGWGVVASL 1080
LAGRALTVLLSPPIVVYSPRVLPVYVYDAHADCGKNVSVAFLVLYG+ALA EGWGVVASL
Sbjct: 1019 LAGRALTVLLSPPIVVYSPRVLPVYVYDAHADCGKNVSVAFLVLYGIALATEGWGVVASL 1078
Query: 1081 KIYPPFAGAAVSAITLVVAFGFAVSRPCLTLKTMEDAVHFLSKDTVVQAISRSATKTRNA 1140
KIYPPFAGAAVSAITLVVAFGFAVSRPCLTL+ MEDAVHFLSKDT+VQAI+RSATKTRNA
Sbjct: 1079 KIYPPFAGAAVSAITLVVAFGFAVSRPCLTLEAMEDAVHFLSKDTIVQAIARSATKTRNA 1138
Query: 1141 LSGTYSAPQRSASSTALLVGDPNATRDKQGNLMLPRDDVVKLRDRLKNEEFVAGSFFCRM 1200
LSGTYSAPQRSASSTALLVGDP ATRDK GNL+LPRDDVVKLRDRL+NEE V GSFF RM
Sbjct: 1139 LSGTYSAPQRSASSTALLVGDPTATRDKAGNLVLPRDDVVKLRDRLRNEELVVGSFFSRM 1198
Query: 1201 KYKRFRHELSSDYDYRREMCTHARILALEEAIDTEWVYMWDKFGGYLLLLLGLTAKAERV 1260
+Y+ F HE +SD+D RREMC HARILALEEAIDTEWVYMWD+FGGYLLLLLGLTAKAERV
Sbjct: 1199 RYRTFCHESASDFDNRREMCAHARILALEEAIDTEWVYMWDRFGGYLLLLLGLTAKAERV 1258
Query: 1261 QDEVRLRLFLDSIGFSDLSAKKIKKWMPEDRRQFEIIQESYIREKEMEEEILMQRREEEG 1320
QDEVRLRLFLDSIGFSDLSAKKIKKWMPEDRRQFEIIQESY+REKEMEEEILMQRREEEG
Sbjct: 1259 QDEVRLRLFLDSIGFSDLSAKKIKKWMPEDRRQFEIIQESYLREKEMEEEILMQRREEEG 1318
Query: 1321 RGKERRKALLEKEERKWKEIEASLISSIPNAGNREAAAMAAAVRAVGGDSVLEDSFARER 1380
RGKERRKALLEKEERKWKEIEASLISSIPNAG+REAAAMAAAVRAVG DSVL DSFARER
Sbjct: 1319 RGKERRKALLEKEERKWKEIEASLISSIPNAGSREAAAMAAAVRAVGSDSVLSDSFARER 1378
Query: 1381 VSSIARRIRTAQLARRALQTGITGAICVLDDEPTTSGRHCGQIDASICQSQKVSFSIAVM 1440
VSSIARRIRTAQLARRALQTGI GAIC+LDDEPTTSGR+CG+ID SICQ+QKVSFSIAVM
Sbjct: 1379 VSSIARRIRTAQLARRALQTGIAGAICILDDEPTTSGRNCGEIDPSICQTQKVSFSIAVM 1438
Query: 1441 IQPESGPVCLLGTEFQKKVCWEILVAGSEQGIEAGQVGLRLITKGDRQTTVAKDWSISAT 1500
IQPESGPVCLLGTEFQKKVCWEILVAG+EQGIEAGQVGLRLITKGDRQTTVAK+WSISAT
Sbjct: 1439 IQPESGPVCLLGTEFQKKVCWEILVAGAEQGIEAGQVGLRLITKGDRQTTVAKEWSISAT 1498
Query: 1501 SIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTD 1560
SIADGRWHIVTMTIDAD+GEATCYLDGGFDG+QTGL LS GNSIWE G EVWVG RPPTD
Sbjct: 1499 SIADGRWHIVTMTIDADLGEATCYLDGGFDGFQTGLPLSVGNSIWELGTEVWVGFRPPTD 1558
Query: 1561 MDVFGRSDSEGAESKMHIMDVFLWGRCLTEDEIASLYSAICSAELNMNEFPEDNWQWADS 1620
+D FGRSDSEGAESKMHIMDVFLWGRCLTEDEIASL++AI S EL M +FPEDNWQWADS
Sbjct: 1559 VDAFGRSDSEGAESKMHIMDVFLWGRCLTEDEIASLHTAIGSTELGMVDFPEDNWQWADS 1618
Query: 1621 PPRVDEWDSDPADVDLYDRDDIDWDGQYSSGRKRRADRDGIVVNVDSFARKFRKPRMETQ 1680
PPRVDEWDSDPADVDLYDRDD+DWDGQYSSGRKRR+DR+ +VV+VDSFAR+FRKPR+ETQ
Sbjct: 1619 PPRVDEWDSDPADVDLYDRDDVDWDGQYSSGRKRRSDRE-VVVDVDSFARRFRKPRVETQ 1677
Query: 1681 EEIYQRMLSVELAVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSE 1740
EEI QRMLSVELAVKEAL ARGE FTD EFPP+DQSLY+DP NPP KLQVV+EWMRP E
Sbjct: 1678 EEINQRMLSVELAVKEALFARGETHFTDQEFPPNDQSLYLDPENPPLKLQVVSEWMRPGE 1737
Query: 1741 IVKESRLDCQPCLFSGAVNPSDVCQGRLGDCWFLSAVAVLTEVSQISEVIITPEYNEEGI 1800
IV E+R D PCLFSG+ NPSDVCQGRLGDCWFLSAVAVLTEVSQISEVIITPEYNEEGI
Sbjct: 1738 IVMENRPDSCPCLFSGSANPSDVCQGRLGDCWFLSAVAVLTEVSQISEVIITPEYNEEGI 1797
Query: 1801 YTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAYAKLHGSYEALEG 1860
YTVRFCIQGEWVPVVVDDWIPCESPGKPAFATS+KG+ELWVSILEKAYAKLHGSYEALEG
Sbjct: 1798 YTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSRKGNELWVSILEKAYAKLHGSYEALEG 1857
Query: 1861 GLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHI 1920
GLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHI
Sbjct: 1858 GLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHI 1917
Query: 1921 SSSGIVQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVP 1980
SSSGIVQGHAYS+LQVREVDGHKLVQIRNPWANEVEWNGPWSDSS EWTDRMK+KLKHVP
Sbjct: 1918 SSSGIVQGHAYSLLQVREVDGHKLVQIRNPWANEVEWNGPWSDSSSEWTDRMKYKLKHVP 1977
Query: 1981 QSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQWRGYSAGGCQDYASWNQNPQFR 2040
QSKDGIFWMSWQDFQIHFRSIYVCRVYP EMRYSVHGQWRGYSAGGCQDYASWNQNPQFR
Sbjct: 1978 QSKDGIFWMSWQDFQIHFRSIYVCRVYPPEMRYSVHGQWRGYSAGGCQDYASWNQNPQFR 2037
Query: 2041 LRASGSDASFPIHVFITLTQ 2060
LRA+G DAS PIHVFITLTQ
Sbjct: 2038 LRATGPDASLPIHVFITLTQ 2057
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435770|ref|XP_002285732.1| PREDICTED: uncharacterized protein LOC100244915 [Vitis vinifera] gi|297746484|emb|CBI16540.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449493556|ref|XP_004159347.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101213361 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449452785|ref|XP_004144139.1| PREDICTED: uncharacterized protein LOC101213361 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356528400|ref|XP_003532791.1| PREDICTED: uncharacterized protein LOC100809231 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356511025|ref|XP_003524232.1| PREDICTED: uncharacterized protein LOC100778679 [Glycine max] | Back alignment and taxonomy information |
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| >gi|22330261|ref|NP_175932.2| calpain-type cysteine protease [Arabidopsis thaliana] gi|30695926|ref|NP_850965.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|30695928|ref|NP_850966.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|30695930|ref|NP_850967.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|20268660|gb|AAL38186.1| calpain-like protein [Arabidopsis thaliana] gi|332195111|gb|AEE33232.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|332195112|gb|AEE33233.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|332195113|gb|AEE33234.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|332195114|gb|AEE33235.1| calpain-type cysteine protease [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297853240|ref|XP_002894501.1| hypothetical protein ARALYDRAFT_892532 [Arabidopsis lyrata subsp. lyrata] gi|297340343|gb|EFH70760.1| hypothetical protein ARALYDRAFT_892532 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|334183339|ref|NP_001185238.1| calpain-type cysteine protease [Arabidopsis thaliana] gi|332195115|gb|AEE33236.1| calpain-type cysteine protease [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|38490651|gb|AAQ55288.2| phytocalpain [Nicotiana benthamiana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2087 | ||||||
| ZFIN|ZDB-GENE-010724-2 | 688 | capn9 "calpain 9" [Danio rerio | 0.165 | 0.502 | 0.367 | 1.4e-54 | |
| ZFIN|ZDB-GENE-040912-97 | 725 | capn3 "calpain 3, (p94)" [Dani | 0.155 | 0.448 | 0.371 | 9.9e-54 | |
| UNIPROTKB|F1P052 | 716 | CAPN8 "Uncharacterized protein | 0.156 | 0.455 | 0.396 | 1e-53 | |
| UNIPROTKB|E1BTA8 | 574 | SOLH "Uncharacterized protein" | 0.149 | 0.543 | 0.379 | 5.6e-53 | |
| MGI|MGI:88263 | 713 | Capn1 "calpain 1" [Mus musculu | 0.155 | 0.455 | 0.370 | 1.2e-52 | |
| RGD|2267 | 713 | Capn1 "calpain 1, (mu/I) large | 0.155 | 0.455 | 0.373 | 5.1e-52 | |
| UNIPROTKB|F1RI38 | 718 | CAPN12 "Uncharacterized protei | 0.152 | 0.444 | 0.381 | 6.4e-52 | |
| UNIPROTKB|A6NHC0 | 703 | CAPN8 "Calpain-8" [Homo sapien | 0.154 | 0.458 | 0.378 | 8.3e-52 | |
| UNIPROTKB|B1B153 | 437 | CAPN8 "Calpain-8" [Homo sapien | 0.154 | 0.736 | 0.378 | 8.3e-52 | |
| UNIPROTKB|P07384 | 714 | CAPN1 "Calpain-1 catalytic sub | 0.156 | 0.456 | 0.371 | 8.3e-52 |
| ZFIN|ZDB-GENE-010724-2 capn9 "calpain 9" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 578 (208.5 bits), Expect = 1.4e-54, P = 1.4e-54
Identities = 143/389 (36%), Positives = 211/389 (54%)
Query: 1695 KEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLF 1754
+E L +G + F D +FP D SL+ ++ V EW RP EI KE P
Sbjct: 32 RECLQ-KG-KLFEDPDFPAVDGSLFYS-----QRVPVNFEWKRPGEICKE------PQFI 78
Query: 1755 SGAVNPSDVCQGRLGDCWFLSAVAVLT-EVSQISEVIITPEYNEEG---IYTVRFCIQGE 1810
+G +D+CQG+LGDCW L+A+A LT + ++ V+ + + G I+ +F +
Sbjct: 79 TGGATRTDICQGQLGDCWLLAAIASLTLKEETLNRVVPNDQTFDRGYAGIFHFQFWQHNK 138
Query: 1811 WVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAYAKLHGSYEALEGGLVQDALVDL 1870
W+ VVVDD +PC K F S +E W ++LEKAYAKL+GSYEAL+GG +A+ D
Sbjct: 139 WMDVVVDDRLPCVRD-KLVFLHSADNNEFWSALLEKAYAKLNGSYEALKGGSTMEAMEDF 197
Query: 1871 TGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHISSSGIVQGHA 1930
TGG GE + ++ + + L L + R G + S + S+ +S+G+V+GHA
Sbjct: 198 TGGVGEMYETKNGPSNLFLI---LKKAIERGSMLGCSIDITSSAESEAQ-TSTGLVKGHA 253
Query: 1931 YSILQVREVD--GHK--LVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSK--D 1984
YS+ V EV+ G K L+++RNPW +VEWNGPWSD+S EWT + K + Q+ D
Sbjct: 254 YSVTGVEEVNYRGAKVQLIRVRNPWG-QVEWNGPWSDNSREWTVIDSSEKKRLLQNSLDD 312
Query: 1985 GIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS-- 2032
G FWM + DF+ ++ + +C + P + V QW RG +AGGC++Y
Sbjct: 313 GEFWMEFGDFKSNYDKVEICNLSPDALSDDVSKQWAVNLFEGSWIRGSTAGGCRNYIDTF 372
Query: 2033 WNQNPQFRLRASGSDASFPI-HVFITLTQ 2060
W NPQF+L D + V + L Q
Sbjct: 373 WT-NPQFKLHLENPDDGDKLCSVIVALMQ 400
|
|
| ZFIN|ZDB-GENE-040912-97 capn3 "calpain 3, (p94)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P052 CAPN8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BTA8 SOLH "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:88263 Capn1 "calpain 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|2267 Capn1 "calpain 1, (mu/I) large subunit" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RI38 CAPN12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A6NHC0 CAPN8 "Calpain-8" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B1B153 CAPN8 "Calpain-8" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P07384 CAPN1 "Calpain-1 catalytic subunit" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.22 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 2087 | |||
| cd00044 | 315 | cd00044, CysPc, Calpains, domains IIa, IIb; calciu | 1e-109 | |
| smart00230 | 318 | smart00230, CysPc, Calpain-like thiol protease fam | 1e-87 | |
| pfam00648 | 302 | pfam00648, Peptidase_C2, Calpain family cysteine p | 6e-81 | |
| cd00214 | 150 | cd00214, Calpain_III, Calpain, subdomain III | 2e-08 | |
| pfam01067 | 142 | pfam01067, Calpain_III, Calpain large subunit, dom | 8e-08 | |
| smart00720 | 143 | smart00720, calpain_III, calpain_III domain | 9e-08 | |
| pfam13385 | 156 | pfam13385, Laminin_G_3, Concanavalin A-like lectin | 2e-06 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 3e-04 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 8e-04 | |
| COG0471 | 461 | COG0471, CitT, Di- and tricarboxylate transporters | 0.002 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 0.003 |
| >gnl|CDD|238004 cd00044, CysPc, Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-109
Identities = 140/309 (45%), Positives = 183/309 (59%), Gaps = 11/309 (3%)
Query: 1704 RQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDV 1763
F D +FPP+D SL D + + V EW RPSEI + P LF +PSDV
Sbjct: 11 VLFEDPDFPPNDSSLGFDDSLSNGQPKKVIEWKRPSEIFADDGNS-NPRLFVNGASPSDV 69
Query: 1764 CQGRLGDCWFLSAVAVLTEVSQISEVIITP----EYNEEGIYTVRFCIQGEWVPVVVDDW 1819
CQG LGDCWFL+A+A L E ++ + +I P E N GIY RF GEWV VV+DD
Sbjct: 70 CQGILGDCWFLAALAALAERPELLKRVIPPDQSFEENYAGIYHFRFWKNGEWVEVVIDDR 129
Query: 1820 IPCESPGKPAFATSKKGHELWVSILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEID 1879
+P + G F S+ +ELWV++LEKAYAKLHGSYEAL GG +AL DLTGG E ID
Sbjct: 130 LPTSN-GGLLFMHSRDRNELWVALLEKAYAKLHGSYEALVGGNTAEALEDLTGGPTERID 188
Query: 1880 MRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHI-SSSGIVQGHAYSILQVRE 1938
++SA A L++ LL F Q G L+G + S S+ +++G+V+GHAYS+L VRE
Sbjct: 189 LKSADASSGD--NDLFALLLSFLQGGSLIGCSTGSRSEEEARTANGLVKGHAYSVLDVRE 246
Query: 1939 VD--GHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQDFQI 1996
V G +L+++RNPW W G DSS W + K + DG FWMS++DF
Sbjct: 247 VQEEGLRLLRLRNPWGVGEWWGGWSDDSSEWWVIDAERKKLLLSGKDDGEFWMSFEDFLR 306
Query: 1997 HFRSIYVCR 2005
+F +YVC
Sbjct: 307 NFDGLYVCN 315
|
Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Length = 315 |
| >gnl|CDD|128526 smart00230, CysPc, Calpain-like thiol protease family | Back alignment and domain information |
|---|
| >gnl|CDD|216041 pfam00648, Peptidase_C2, Calpain family cysteine protease | Back alignment and domain information |
|---|
| >gnl|CDD|238132 cd00214, Calpain_III, Calpain, subdomain III | Back alignment and domain information |
|---|
| >gnl|CDD|216279 pfam01067, Calpain_III, Calpain large subunit, domain III | Back alignment and domain information |
|---|
| >gnl|CDD|214786 smart00720, calpain_III, calpain_III domain | Back alignment and domain information |
|---|
| >gnl|CDD|222092 pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
| >gnl|CDD|223547 COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2087 | |||
| smart00230 | 318 | CysPc Calpain-like thiol protease family. Calpain- | 100.0 | |
| cd00044 | 315 | CysPc Calpains, domains IIa, IIb; calcium-dependen | 100.0 | |
| KOG0045 | 612 | consensus Cytosolic Ca2+-dependent cysteine protea | 100.0 | |
| PF00648 | 298 | Peptidase_C2: Calpain family cysteine protease Thi | 100.0 | |
| KOG0045 | 612 | consensus Cytosolic Ca2+-dependent cysteine protea | 99.95 | |
| smart00720 | 143 | calpain_III calpain_III. | 98.36 | |
| cd00214 | 150 | Calpain_III Calpain, subdomain III. Calpains are c | 98.15 | |
| PF01067 | 147 | Calpain_III: Calpain large subunit, domain III; In | 98.08 | |
| cd00152 | 201 | PTX Pentraxins are plasma proteins characterized b | 97.98 | |
| smart00159 | 206 | PTX Pentraxin / C-reactive protein / pentaxin fami | 97.87 | |
| PF13385 | 157 | Laminin_G_3: Concanavalin A-like lectin/glucanases | 97.4 | |
| PF00354 | 195 | Pentaxin: Pentaxin family; InterPro: IPR001759 Pen | 97.32 | |
| cd00110 | 151 | LamG Laminin G domain; Laminin G-like domains are | 94.54 | |
| smart00210 | 184 | TSPN Thrombospondin N-terminal -like domains. Hepa | 94.35 | |
| smart00282 | 135 | LamG Laminin G domain. | 93.53 | |
| smart00560 | 133 | LamGL LamG-like jellyroll fold domain. | 91.47 | |
| cd02619 | 223 | Peptidase_C1 C1 Peptidase family (MEROPS database | 85.58 |
| >smart00230 CysPc Calpain-like thiol protease family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-70 Score=621.27 Aligned_cols=302 Identities=41% Similarity=0.812 Sum_probs=267.3
Q ss_pred HHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCchH
Q 000135 1694 VKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCWF 1773 (2087)
Q Consensus 1694 IKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCWF 1773 (2087)
+.+.|.+++ .+|+|++|||++.||+.++..+ ..++|+||+|+++ +|.+|.++++|.||+||.+|||||
T Consensus 4 i~~~c~~~~-~~f~D~~Fpp~~~sl~~~~~~~-----~~~~W~Rp~e~~~------~~~~~~~~i~~~di~QG~lgDC~~ 71 (318)
T smart00230 4 LRQYCKESG-TLFEDPLFPANNGSLFFSQRQR-----KFVVWKRPHEIFE------NPPFIVGGASRTDICQGVLGDCWL 71 (318)
T ss_pred HHHHHHHcC-CCccCCCCCCCcCccccCCCCC-----CCcEEECcHHHcC------CCEEEeCCCChhhccCcccccHHH
Confidence 455677665 6999999999999998765422 2479999999986 478898999999999999999999
Q ss_pred HHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHHH
Q 000135 1774 LSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAYA 1849 (2087)
Q Consensus 1774 LAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAYA 1849 (2087)
+|||++|+++|.+++.++++. .|+.|+|+||||+||+|+.|+|||+||+.. |+++|+++.+++|+|++|||||||
T Consensus 72 lsal~~la~~~~~i~~if~~~~~~~~~~~G~y~vrl~~~G~w~~V~VDd~lP~~~-~~~~~~~~~~~~e~W~~LLEKAyA 150 (318)
T smart00230 72 LAALASLTLREKLLDRVIPHDQEFSENYAGIFHFRFWRFGKWVDVVIDDRLPTYN-GELVFMHSNSRNEFWSALLEKAYA 150 (318)
T ss_pred HHHHHHHHhCHHHHhheEeCCcccccccCCEEEEEEEECCEEEEEEecCCCeeeC-CceEEEEeCCCCcchhHHHHHHHH
Confidence 999999999998888777532 468999999999999999999999999964 569999999999999999999999
Q ss_pred HhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCCCC---CccccccCcc
Q 000135 1850 KLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGS---DVHISSSGIV 1926 (2087)
Q Consensus 1850 KLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPsgS---Deeves~GLV 1926 (2087)
|+||||++|.||++.+||++|||++++.+++++.. .+.+++|+.|.++.++|++|+|+++..+ +...++.||+
T Consensus 151 K~~GsY~~i~gg~~~~al~~LTG~~~~~i~l~~~~----~~~~~~w~~l~~~~~~g~lv~~~t~~~~~~~~~~~~~~GLv 226 (318)
T smart00230 151 KLNGCYEALKGGSTTEALEDLTGGVAESIDLKEAS----KDPDNLFEDLFKAFERGSLMGCSIGAGTAVEEEEQKDCGLV 226 (318)
T ss_pred HHcCCCcccCCCCHHHHHHHhcCCCeEEEEccccc----CCHHHHHHHHHHHHhCCCeEEEEcCCCCcchhhhhhhcCcc
Confidence 99999999999999999999999999999988643 2467899999999999999999987553 3445689999
Q ss_pred cCceeEEEEEEEECCEE--EEEEecCCCCCccccCCCCCCCcccc---hHHhhhhcCCCCCCCCeEEEehhhhhhcccce
Q 000135 1927 QGHAYSILQVREVDGHK--LVQIRNPWANEVEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSI 2001 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~R--LVRLRNPWG~~~EWKGdWSD~S~eWT---eeLKkkL~~~~~sDDGeFWMSfEDFLkyFssL 2001 (2087)
++|||+|++++++++++ ||+|||||| ..||+|+|||+|++|+ +++++++++. ..+||+|||+|+||++||+++
T Consensus 227 ~~HaYsVl~v~~~~~~~~~Ll~lrNPWg-~~eW~G~wsd~s~~W~~~~~~~~~~l~~~-~~~dG~FWM~~~df~~~F~~~ 304 (318)
T smart00230 227 KGHAYSVTDVREVQGRRQELLRLRNPWG-QVEWNGPWSDDSPEWRSVSASEKKNLGLT-FDDDGEFWMSFEDFLRHFDKV 304 (318)
T ss_pred cCccEEEEEEEEEecCCeEEEEEECCCC-CCCcCCCCCCCCccccccCHHHHHHhCCC-CCCCCEEEEEhHHHHhhCCeE
Confidence 99999999999998766 999999999 5899999999999999 6678888764 469999999999999999999
Q ss_pred eEeeEcCCCCcee
Q 000135 2002 YVCRVYPSEMRYS 2014 (2087)
Q Consensus 2002 yICrL~Pds~ryr 2014 (2087)
+||++.|+.+.|+
T Consensus 305 ~vc~~~~~~~~~r 317 (318)
T smart00230 305 EICNLNPDSLEER 317 (318)
T ss_pred EEeccCCcccccc
Confidence 9999999987664
|
Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit). |
| >cd00044 CysPc Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like | Back alignment and domain information |
|---|
| >KOG0045 consensus Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily) [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00648 Peptidase_C2: Calpain family cysteine protease This is family C2 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG0045 consensus Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily) [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00720 calpain_III calpain_III | Back alignment and domain information |
|---|
| >cd00214 Calpain_III Calpain, subdomain III | Back alignment and domain information |
|---|
| >PF01067 Calpain_III: Calpain large subunit, domain III; InterPro: IPR022682 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity | Back alignment and domain information |
|---|
| >smart00159 PTX Pentraxin / C-reactive protein / pentaxin family | Back alignment and domain information |
|---|
| >PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A | Back alignment and domain information |
|---|
| >PF00354 Pentaxin: Pentaxin family; InterPro: IPR001759 Pentaxins (or pentraxins) [, ] are a family of proteins which show, under electron microscopy, a discoid arrangement of five noncovalently bound subunits | Back alignment and domain information |
|---|
| >cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans | Back alignment and domain information |
|---|
| >smart00210 TSPN Thrombospondin N-terminal -like domains | Back alignment and domain information |
|---|
| >smart00282 LamG Laminin G domain | Back alignment and domain information |
|---|
| >smart00560 LamGL LamG-like jellyroll fold domain | Back alignment and domain information |
|---|
| >cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 2087 | ||||
| 1qxp_A | 900 | Crystal Structure Of A Mu-Like Calpain Length = 900 | 2e-53 | ||
| 1kfx_L | 699 | Crystal Structure Of Human M-Calpain Form I Length | 1e-50 | ||
| 3df0_A | 714 | Calcium-Dependent Complex Between M-Calpain And Cal | 3e-49 | ||
| 1u5i_A | 700 | Crystal Structure Analysis Of Rat M-Calpain Mutant | 3e-49 | ||
| 1df0_A | 700 | Crystal Structure Of M-Calpain Length = 700 | 3e-49 | ||
| 1tl9_A | 339 | High Resolution Crystal Structure Of Calpain I Prot | 2e-47 | ||
| 2ary_A | 351 | Catalytic Domain Of Human Calpain-1 Length = 351 | 2e-46 | ||
| 1kxr_A | 339 | Crystal Structure Of Calcium-Bound Protease Core Of | 2e-46 | ||
| 1zcm_A | 321 | Human Calpain Protease Core Inhibited By Zllych2f L | 5e-46 | ||
| 1ziv_A | 339 | Catalytic Domain Of Human Calpain-9 Length = 339 | 1e-45 | ||
| 2p0r_A | 333 | Structure Of Human Calpain 9 In Complex With Leupep | 2e-45 | ||
| 2nqa_A | 326 | Catalytic Domain Of Human Calpain 8 Length = 326 | 1e-44 | ||
| 1mdw_A | 328 | Crystal Structure Of Calcium-bound Protease Core Of | 7e-44 |
| >pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain Length = 900 | Back alignment and structure |
|
| >pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I Length = 699 | Back alignment and structure |
| >pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And Calpastatin Length = 714 | Back alignment and structure |
| >pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10 Thr Length = 700 | Back alignment and structure |
| >pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain Length = 700 | Back alignment and structure |
| >pdb|1TL9|A Chain A, High Resolution Crystal Structure Of Calpain I Protease Core In Complex With Leupeptin Length = 339 | Back alignment and structure |
| >pdb|2ARY|A Chain A, Catalytic Domain Of Human Calpain-1 Length = 351 | Back alignment and structure |
| >pdb|1KXR|A Chain A, Crystal Structure Of Calcium-Bound Protease Core Of Calpain I Length = 339 | Back alignment and structure |
| >pdb|1ZCM|A Chain A, Human Calpain Protease Core Inhibited By Zllych2f Length = 321 | Back alignment and structure |
| >pdb|1ZIV|A Chain A, Catalytic Domain Of Human Calpain-9 Length = 339 | Back alignment and structure |
| >pdb|2P0R|A Chain A, Structure Of Human Calpain 9 In Complex With Leupeptin Length = 333 | Back alignment and structure |
| >pdb|2NQA|A Chain A, Catalytic Domain Of Human Calpain 8 Length = 326 | Back alignment and structure |
| >pdb|1MDW|A Chain A, Crystal Structure Of Calcium-bound Protease Core Of Calpain Ii Reveals The Basis For Intrinsic Inactivation Length = 328 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 350 bits (898), Expect = e-104
Identities = 129/422 (30%), Positives = 196/422 (46%), Gaps = 52/422 (12%)
Query: 1676 RMETQEEIYQRMLSVELAVKE---------ALSARGERQFTDHEFPPDDQSLYVDPGNPP 1726
++ E + + S E A+K F D FP SL P
Sbjct: 7 KLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPSFPALPSSLGFKELGPY 66
Query: 1727 SKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCWFLSAVAVLTE---- 1782
S EW RP+EI + P G +D+CQG LGD W L+A+A LT
Sbjct: 67 SSKTRGIEWKRPTEICAD------PQFIIGGATRTDICQGALGDSWLLAAIASLTLNEEI 120
Query: 1783 VSQISEVIITPEYNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVS 1842
++++ + + + N GI+ +F GEWV VVVDD +P + G+ F S +G E W +
Sbjct: 121 LARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKD-GELLFVHSAEGSEFWSA 179
Query: 1843 ILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFK 1902
+LEKAYAK++G YEAL GG + D TGG E ++R L+ + +
Sbjct: 180 LLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKPP-------PNLFKIIQKAL 232
Query: 1903 QEGFLLGAGSPSGSDVH---ISSSGIVQGHAYSILQVREVDG----HKLVQIRNPWANEV 1955
++G LLG S ++ +V+GHAYS+ EV+ KL++IRNPW +V
Sbjct: 233 EKGSLLGCSIDITSAADSEAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPW-GQV 291
Query: 1956 EWNGPWSDSSPE-WTDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYS 2014
EW G W+D+ P T + + + +DG FWMS+ DF H+ + +C + P +
Sbjct: 292 EWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMSFSDFLRHYSRLEICNLTPDTLTCD 351
Query: 2015 ---------VHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSDASF-----PIHVFITL 2058
+ G W RG +AGGC++Y ++ NPQ+ ++ D + L
Sbjct: 352 SYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDDEDGERGCTFLVGL 411
Query: 2059 TQ 2060
Q
Sbjct: 412 IQ 413
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
| >2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
| >2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A Length = 339 | Back alignment and structure |
|---|
| >1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A* Length = 339 | Back alignment and structure |
|---|
| >2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Length = 355 | Back alignment and structure |
|---|
| >3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Length = 217 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Length = 452 | Back alignment and structure |
|---|
| >3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 3n7k_A 3r4s_A* 3r4u_A Length = 424 | Back alignment and structure |
|---|
| >3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Length = 206 | Back alignment and structure |
|---|
| >3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A Length = 413 | Back alignment and structure |
|---|
| >3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Length = 204 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2087 | |||
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 100.0 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 100.0 | |
| 2r9f_A | 339 | Calpain-1 catalytic subunit; protease, peptidase, | 100.0 | |
| 2nqa_A | 326 | Calpain 8; calpain, calcium-dependent cytoplasmic | 100.0 | |
| 1ziv_A | 339 | Calpain 9; cysteine protease, papain, calcium-depe | 100.0 | |
| 2qfe_A | 148 | Calpain-7; C2-like domain, hydrolase, nuclear prot | 98.07 | |
| 3pvn_A | 206 | C-reactive protein; pentraxin family, immune syste | 97.82 | |
| 3flp_A | 217 | SAP-like pentraxin; physiological doubly-stacked h | 97.82 | |
| 3kqr_A | 204 | Serum amyloid P-component; glycoprotein, disulfide | 97.78 | |
| 4dqa_A | 355 | Uncharacterized protein; two domains structure, DU | 97.07 | |
| 1za4_A | 251 | Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cel | 93.81 | |
| 2v73_A | 191 | CBM40, putative EXO-alpha-sialidase; carbohydrate- | 91.9 | |
| 1a8d_A | 452 | Tetanus neurotoxin; clostridial, ganglioside bindi | 91.6 | |
| 2erf_A | 209 | Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sug | 89.88 | |
| 3sh4_A | 195 | LG3 peptide; actin disassambly, integrin alpha12 B | 84.96 | |
| 1f5f_A | 205 | SHBG, sex hormone-binding globulin; jellyroll, sig | 84.44 | |
| 3v64_A | 191 | Low-density lipoprotein receptor-related protein; | 83.95 | |
| 1d2s_A | 170 | SHBG, sex hormone-binding globulin; steroid transp | 82.79 | |
| 1pz7_A | 204 | Agrin; structural protein; 1.42A {Gallus gallus} S | 82.09 | |
| 3qcw_A | 1245 | Neurexin-1-alpha; synaptic adhesion molecule, cell | 81.87 | |
| 3pve_A | 189 | Agrin, AGRN protein; mRNA splicing, structural gen | 81.46 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 81.12 |
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-77 Score=727.47 Aligned_cols=354 Identities=36% Similarity=0.705 Sum_probs=308.5
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
++++.|.++| .+|+||+|||+++||+.++..|..+....++|+||.||++ +|++|.++++|.||+||.+||||
T Consensus 34 ~l~~~c~~~~-~~f~D~~Fp~~~~sl~~~~~~~~~~~~~~~~W~Rp~e~~~------~p~~~~~~~~~~di~QG~lgDCw 106 (714)
T 3bow_A 34 TLRNECLEAG-ALFQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICA------DPQFIIGGATRTDICQGALGDSW 106 (714)
T ss_dssp HHHHHHHHHT-CCCCCTTSCSSGGGTCSSTTSTTCGGGTTCEEECHHHHCS------SCBSCSSCSCGGGCBCCSSSCHH
T ss_pred HHHHHHHHcC-CeeeCcCCCCCccccccCCCCccccccCCceEEChHHHhc------CCeeeeCCCCccccccCCcCChH
Confidence 4566788776 5999999999999999876555443344579999999986 48899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||++|+|+.|+|||+||+. +|+++|++|.+++|+|++||||||
T Consensus 107 ~laala~la~~~~ll~~v~~~~~~~~~~~~G~y~~~~~~~G~w~~VvvDD~lP~~-~g~~~f~~s~~~~e~W~~LlEKAy 185 (714)
T 3bow_A 107 LLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTK-DGELLFVHSAEGSEFWSALLEKAY 185 (714)
T ss_dssp HHHHHHHHTTSHHHHHHHSCTTCCSSSSCSSEEEEEEEETTEEEEEEEESCEEEE-TTEESSCBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHhhcCcCcCcccCCceEEEEEEeeCCEEEEEEEeccceee-CCceEEeecCCCCcchHHHHHHHH
Confidence 9999999999999888887642 46799999999999999999999999996 499999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCC---CCCccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPS---GSDVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPs---gSDeeves~GL 1925 (2087)
||+||||++|.||++.+||+||||++++.+++++. ++++|+.|.++.++|++|+|++.. ...+.....||
T Consensus 186 AK~~G~Y~~l~gg~~~~al~~lTG~~~~~~~l~~~-------~~~l~~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~~GL 258 (714)
T 3bow_A 186 AKINGCYEALSGGATTEGFEDFTGGIAEWYELRKP-------PPNLFKIIQKALEKGSLLGCSIDITSAADSEAVTYQKL 258 (714)
T ss_dssp HHHTSSSGGGSSBCHHHHHHHHHCCEEEEEETTSC-------CTTHHHHHHHHHHTTCEEEEECCSTTSCTTCCBCTTSC
T ss_pred HHHhCCcccccCCCHHHHHHHhhCCCeEEEEcCCC-------cHHHHHHHHHHHhCCCeEEEEcccCCcccccchhcCCC
Confidence 99999999999999999999999999999998753 457999999999999999998731 21234568899
Q ss_pred ccCceeEEEEEEEEC----CEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD----GHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd----G~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+.+|||+|+++++++ +++|||||||||+ .||||+|||+|++|++ +.+++|.+. .+||+|||+|+||++||
T Consensus 259 ~~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~-~ew~G~wsd~s~~W~~~~~~~~~~l~~~--~~dg~FWm~~~df~~~F 335 (714)
T 3bow_A 259 VKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQ-VEWTGKWNDNCPSWNTVDPEVRANLTER--QEDGEFWMSFSDFLRHY 335 (714)
T ss_dssp BTTSCEEEEEEEEEEETTEEEEEEEEECTTSC-CCCCSTTSTTCGGGGGSCHHHHHHHCCC--CCSSEEEEEHHHHHHHC
T ss_pred cCCceEEEeeeEEeecCCCceEEEEEECCCCC-cccCCCCCCCCccccccCHHHHHHhCCC--CCCCeEEEEhHHHHhhC
Confidence 999999999999984 4799999999995 7999999999999994 577777653 48999999999999999
Q ss_pred cceeEeeEcCCCCc---------eeeccee-eccCCCCCCCC-CCCCcCCeEEEEecCCCC-----CCCEEEEEEeccCC
Q 000135 1999 RSIYVCRVYPSEMR---------YSVHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSDA-----SFPIHVFITLTQSR 2062 (2087)
Q Consensus 1999 ssLyICrL~Pds~r---------yrVhGeW-rGsSAGGc~n~-~SF~~NPQF~LeVtssD~-----sep~eVlISLsQkr 2062 (2087)
+.++||++.|+.+. ..++|+| ++.+||||.++ .||++||||.|+++++++ .++++|+|+|+|++
T Consensus 336 ~~~~ic~~~~~~~~~~~~~~w~~~~~~g~W~~g~taGG~~~~~~tf~~NPqf~l~v~~~~~~~~~~~~~~~v~v~L~Q~~ 415 (714)
T 3bow_A 336 SRLEICNLTPDTLTCDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDDEDGERGCTFLVGLIQKH 415 (714)
T ss_dssp CEEEEEESSSSCTTCSSCCEEEEEEEEEEECTTTTCCCCTTCHHHHTTSCCEEEEECGGGCBCGGGCCBEEEEEEEEEES
T ss_pred CeEEEEEecccccccccCcceEEEEEeceeccCCCCCCCCCccccccCCceEEEEEccCCccccccCCccEEEEEeeeec
Confidence 99999999887541 2478999 47899999998 799999999999986543 34699999999985
Q ss_pred cc
Q 000135 2063 FY 2064 (2087)
Q Consensus 2063 ~Y 2064 (2087)
..
T Consensus 416 ~r 417 (714)
T 3bow_A 416 RR 417 (714)
T ss_dssp CG
T ss_pred cc
Confidence 43
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
| >2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A | Back alignment and structure |
|---|
| >2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A* | Back alignment and structure |
|---|
| >2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens} | Back alignment and structure |
|---|
| >3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A | Back alignment and structure |
|---|
| >3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A | Back alignment and structure |
|---|
| >3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* | Back alignment and structure |
|---|
| >4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A | Back alignment and structure |
|---|
| >2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* | Back alignment and structure |
|---|
| >2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A | Back alignment and structure |
|---|
| >3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A | Back alignment and structure |
|---|
| >1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* | Back alignment and structure |
|---|
| >3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A | Back alignment and structure |
|---|
| >1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* | Back alignment and structure |
|---|
| >1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A | Back alignment and structure |
|---|
| >3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* | Back alignment and structure |
|---|
| >3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} | Back alignment and structure |
|---|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 2087 | ||||
| d1mdwa_ | 323 | d.3.1.3 (A:) Calpain large subunit, catalytic doma | 1e-87 | |
| d2r9fa1 | 322 | d.3.1.3 (A:33-354) Calpain large subunit, catalyti | 4e-86 | |
| d1ziva1 | 310 | d.3.1.3 (A:28-337) Calpain large subunit, catalyti | 3e-81 | |
| d1qxpa3 | 159 | b.14.1.1 (A:356-514) Calpain large subunit, middle | 2e-07 | |
| d1df0a2 | 159 | b.14.1.1 (A:356-514) Calpain large subunit, middle | 3e-07 | |
| d2slia1 | 196 | b.29.1.9 (A:81-276) Leech intramolecular trans-sia | 8e-07 | |
| d1a8da1 | 247 | b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium | 1e-06 | |
| d1b09a_ | 206 | b.29.1.5 (A:) C-reactive protein (CRP) {Human (Hom | 4e-06 | |
| d1saca_ | 204 | b.29.1.5 (A:) Serum amyloid P component (SAP) {Hum | 2e-04 | |
| d1epwa1 | 218 | b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostr | 6e-04 |
| >d1mdwa_ d.3.1.3 (A:) Calpain large subunit, catalytic domain (domain II) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 323 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Calpain large subunit, catalytic domain (domain II) domain: Calpain large subunit, catalytic domain (domain II) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 287 bits (734), Expect = 1e-87
Identities = 107/313 (34%), Positives = 160/313 (51%), Gaps = 27/313 (8%)
Query: 1706 FTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQ 1765
F D FP SL P S EW RP+EI + P G +D+CQ
Sbjct: 25 FQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICAD------PQFIIGGATRTDICQ 78
Query: 1766 GRLGDCWFLSAVAVLTE----VSQISEVIITPEYNEEGIYTVRFCIQGEWVPVVVDDWIP 1821
G LGD W L+A+A LT ++++ + + + N GI+ +F GEWV VVVDD +P
Sbjct: 79 GALGDSWLLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLP 138
Query: 1822 CESPGKPAFATSKKGHELWVSILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDMR 1881
+ G+ F S +G E W ++LEKAYAK++G YEAL GG + D TGG E ++R
Sbjct: 139 TKD-GELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELR 197
Query: 1882 SAQAQIDLASGRLWSQLLRFKQEGFLLGA---GSPSGSDVHISSSGIVQGHAYSILQVRE 1938
L+ + + ++G LLG + + ++ +V+GHAYS+ E
Sbjct: 198 KPPPN-------LFKIIQKALEKGSLLGCSIDITSAADSEAVTYQKLVKGHAYSVTGAEE 250
Query: 1939 VDGH----KLVQIRNPWANEVEWNGPWSDSSPEWTD-RMKHKLKHVPQSKDGIFWMSWQD 1993
V+ KL++IRNPW +VEW G W+D+ P W + + + +DG FWMS+ D
Sbjct: 251 VESSGSLQKLIRIRNPWG-QVEWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMSFSD 309
Query: 1994 FQIHFRSIYVCRV 2006
F H+ + +C +
Sbjct: 310 FLRHYSRLEICNL 322
|
| >d2r9fa1 d.3.1.3 (A:33-354) Calpain large subunit, catalytic domain (domain II) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 322 | Back information, alignment and structure |
|---|
| >d1ziva1 d.3.1.3 (A:28-337) Calpain large subunit, catalytic domain (domain II) {Human (Homo sapiens), calpain 9 [TaxId: 9606]} Length = 310 | Back information, alignment and structure |
|---|
| >d1qxpa3 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 159 | Back information, alignment and structure |
|---|
| >d1df0a2 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 159 | Back information, alignment and structure |
|---|
| >d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Length = 196 | Back information, alignment and structure |
|---|
| >d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Length = 247 | Back information, alignment and structure |
|---|
| >d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Length = 206 | Back information, alignment and structure |
|---|
| >d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Length = 204 | Back information, alignment and structure |
|---|
| >d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Length = 218 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2087 | |||
| d2r9fa1 | 322 | Calpain large subunit, catalytic domain (domain II | 100.0 | |
| d1mdwa_ | 323 | Calpain large subunit, catalytic domain (domain II | 100.0 | |
| d1ziva1 | 310 | Calpain large subunit, catalytic domain (domain II | 100.0 | |
| d1df0a2 | 159 | Calpain large subunit, middle domain (domain III) | 98.12 | |
| d1qxpa3 | 159 | Calpain large subunit, middle domain (domain III) | 98.08 | |
| d1b09a_ | 206 | C-reactive protein (CRP) {Human (Homo sapiens) [Ta | 97.77 | |
| d2slia1 | 196 | Leech intramolecular trans-sialidase, N-terminal d | 97.35 | |
| d1saca_ | 204 | Serum amyloid P component (SAP) {Human (Homo sapie | 97.22 | |
| d1a8da1 | 247 | Tetanus neurotoxin {Clostridium tetani [TaxId: 151 | 97.17 | |
| d1epwa1 | 218 | Botulinum neurotoxin {Clostridium botulinum, serot | 96.64 | |
| d2erfa1 | 206 | Thrombospondin 1 N-terminal domain {Human (Homo sa | 92.5 | |
| d2ah2a1 | 225 | Trypanosoma sialidase, C-terminal domain {Parasiti | 91.39 | |
| d3btaa1 | 207 | Botulinum neurotoxin {Clostridium botulinum, serot | 90.85 | |
| d2r1da1 | 177 | Ligand-binding domain of neurexin 1beta {Rat (Ratt | 90.31 | |
| d1dyka1 | 189 | Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: | 87.61 | |
| d1dyka2 | 185 | Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: | 86.86 | |
| d1pz7a_ | 195 | Agrin {Chicken (Gallus gallus) [TaxId: 9031]} | 86.5 | |
| d1h30a1 | 191 | Growth-arrest-specific protein Gas6 {Human (Homo s | 81.99 | |
| d1d2sa_ | 170 | Sex hormone-binding globulin {Human (Homo sapiens) | 81.81 |
| >d2r9fa1 d.3.1.3 (A:33-354) Calpain large subunit, catalytic domain (domain II) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Calpain large subunit, catalytic domain (domain II) domain: Calpain large subunit, catalytic domain (domain II) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=100.00 E-value=1.6e-69 Score=605.64 Aligned_cols=296 Identities=39% Similarity=0.747 Sum_probs=255.4
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
+|++.|.++| .+|+|++|||+++||+.++..+..+....++|+||+|+++ +|++|.++++|.||+||.+||||
T Consensus 12 ~i~~~c~~~~-~~f~D~~Fpp~~~Sl~~~~~~~~~~~~~~i~W~Rp~e~~~------~~~~~~~~~~~~di~QG~lgDC~ 84 (322)
T d2r9fa1 12 NLRARCLQNG-VLFQDDAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLS------NPQFIVDGATRTDICQGALGDCW 84 (322)
T ss_dssp HHHHHHHHTT-CCCCCTTSCSSHHHHCSSTTSTTSHHHHHCEEECHHHHCS------SCBSCSSCSCGGGCBCCSSSCHH
T ss_pred HHHHHHHHcC-CeeECcCCcCCccccccCcCCccccccCCcEEECcHHhcC------CCeEEeCCCCcccccCCCcCCEE
Confidence 3556677776 5899999999999998766544444445679999999986 47889999999999999999999
Q ss_pred HHHHHHHHhcccccccccccc----ccCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITP----EYNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~P----eyNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|+|||++||++|.+++++++. ..++.|+|+||||++|+|+.|+|||+||+. +|+|+|+++.+++|+|++||||||
T Consensus 85 llsal~~la~~~~~~~~i~~~~~~~~~~~~G~y~v~l~~~G~w~~V~VDD~lP~~-~g~~~~~~~~~~~e~W~~LlEKAy 163 (322)
T d2r9fa1 85 LLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTK-DGKLVFVHSAQGNEFWSALLEKAY 163 (322)
T ss_dssp HHHHHHHHTTCHHHHHHHSCSCCCSSTTCCSEEEEEEEETTEEEEEEEESCEEEE-TTEESSCBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHcChhhhhccCCcCcccccCcceeEEEEEeeCCeeEEEEecCceecc-CCCEeeeecCCCCccHHHHHHHHH
Confidence 999999999999877766632 346789999999999999999999999995 789999999989999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCCCC---CccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGS---DVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPsgS---Deeves~GL 1925 (2087)
||+||||++|+||++.+||++|||++++.+++++. .+++|+.|.++.++|++|+|++.... .+.....||
T Consensus 164 AKl~GsY~~l~gG~~~~aL~~LTG~~~~~~~~~~~-------~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~e~~~~~GL 236 (322)
T d2r9fa1 164 AKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKA-------PSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNL 236 (322)
T ss_dssp HHHHTSSGGGSSCCHHHHHHHTTCCEEEEEEGGGC-------CTTHHHHHHHHHHHTCEEEEECCCSSSSTTCSBCTTSC
T ss_pred HHHhCCccccCCCCHHHHHHHhcCCCcEEEEcccC-------chhHHHHHHHHHHCCCceEEEEecCCccchhhhhhcCC
Confidence 99999999999999999999999999999988653 34699999999999999998865332 223456799
Q ss_pred ccCceeEEEEEEEEC--C--EEEEEEecCCCCCccccCCCCCCCcccchH---HhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD--G--HKLVQIRNPWANEVEWNGPWSDSSPEWTDR---MKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd--G--~RLVRLRNPWG~~~EWKGdWSD~S~eWTee---LKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+.+|||+|++++++. + .+|||||||||+ .||+|+|||+|++|++. .+..+. ...+||+|||+|+||++||
T Consensus 237 v~~HaYsVl~v~~~~~~~~~~~Lv~LRNPwg~-~ew~G~ws~~s~~W~~~~~~~~~~~~--~~~ddG~FWms~~df~~~F 313 (322)
T d2r9fa1 237 VRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE-VEWKGPWSDNSYEWNKVDPYEREQLR--VKMEDGEFWMSFRDFIREF 313 (322)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECTTSC-CCCCSTTSTTCGGGGGSCHHHHHHHC--CCCCSSEEEEEHHHHHHHC
T ss_pred cCCcceEEEEEEEEeeCCCcEEEEEEECCCCC-CcccCCCCCCChhhccCCHHHHHhcC--CCCCCCEEEeEHHHHHHhC
Confidence 999999999999863 3 589999999996 69999999999999863 333443 3578999999999999999
Q ss_pred cceeEeeE
Q 000135 1999 RSIYVCRV 2006 (2087)
Q Consensus 1999 ssLyICrL 2006 (2087)
++++||++
T Consensus 314 ~~v~vC~~ 321 (322)
T d2r9fa1 314 TKLEICNL 321 (322)
T ss_dssp CEEEEEEC
T ss_pred CceEEEeC
Confidence 99999986
|
| >d1mdwa_ d.3.1.3 (A:) Calpain large subunit, catalytic domain (domain II) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
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| >d1ziva1 d.3.1.3 (A:28-337) Calpain large subunit, catalytic domain (domain II) {Human (Homo sapiens), calpain 9 [TaxId: 9606]} | Back information, alignment and structure |
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| >d1df0a2 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
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| >d1qxpa3 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
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| >d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} | Back information, alignment and structure |
|---|
| >d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} | Back information, alignment and structure |
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| >d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} | Back information, alignment and structure |
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| >d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2ah2a1 b.29.1.15 (A:409-633) Trypanosoma sialidase, C-terminal domain {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
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| >d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} | Back information, alignment and structure |
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| >d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1pz7a_ b.29.1.4 (A:) Agrin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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